AIH curated blacklist: matched 3 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 95
Pass (FILTER=PASS): 15 (15.8%)
Fail (FILTER=FAIL): 80 (84.2%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 3
All 3 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 13
confidence_below_min(low<high): 12
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 11
confidence_below_min(medium<high): 9
total_reads_below_min(4.0<8.0): 5
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 5
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 4
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 3
confidence_below_min(medium<high);aih_curated_blacklist: 3
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 3
total_reads_below_min(7.0<8.0): 2
total_reads_below_min(5.0<8.0): 2
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 2
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 2
total_reads_below_min(3.0<8.0): 1
Breakdown by confidence:
high: 15 pass, 10 fail (total: 25)
low: 0 pass, 47 fail (total: 47)
medium: 0 pass, 23 fail (total: 23)
Arriba filter: 95 rows -> 15 PASS; wrote aih-tih-sc-20b7e4-R1_B23WHYVLT4_1.arriba.fusions.filtered.tsv and aih-tih-sc-20b7e4-R1_B23WHYVLT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: aih-tih-sc-20b7e4-R1_B23WHYVLT4_1.arriba.fusions.filter_summary.txt