File Info

Filename
aih-tih-sc-2f84cc-R1_B23WHYVLT4_1.Log.final.out
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1a/d4e748c570fc5361d6ed1cefa6a876/aih-tih-sc-2f84cc-R1_B23WHYVLT4_1.Log.final.out
Size
2.0 KB
Attempt
                                 Started job on |	Jun 08 07:28:31
                             Started mapping on |	Jun 08 07:30:56
                                    Finished on |	Jun 08 07:57:42
       Mapping speed, Million of reads per hour |	273.68

                          Number of input reads |	122090521
                      Average input read length |	243
                                    UNIQUE READS:
                   Uniquely mapped reads number |	115406939
                        Uniquely mapped reads % |	94.53%
                          Average mapped length |	243.09
                       Number of splices: Total |	105374921
            Number of splices: Annotated (sjdb) |	103503983
                       Number of splices: GT/AG |	104232940
                       Number of splices: GC/AG |	799953
                       Number of splices: AT/AC |	87535
               Number of splices: Non-canonical |	254493
                      Mismatch rate per base, % |	0.42%
                         Deletion rate per base |	0.01%
                        Deletion average length |	1.02
                        Insertion rate per base |	0.00%
                       Insertion average length |	1.47
                             MULTI-MAPPING READS:
        Number of reads mapped to multiple loci |	3837751
             % of reads mapped to multiple loci |	3.14%
        Number of reads mapped to too many loci |	293253
             % of reads mapped to too many loci |	0.24%
                                  UNMAPPED READS:
  Number of reads unmapped: too many mismatches |	283188
       % of reads unmapped: too many mismatches |	0.23%
            Number of reads unmapped: too short |	1335472
                 % of reads unmapped: too short |	1.09%
                Number of reads unmapped: other |	154380
                     % of reads unmapped: other |	0.13%
                                  CHIMERIC READS:
                       Number of chimeric reads |	1686436
                            % of chimeric reads |	1.38%