File Info
- Filename
- aih-tih-sc-13a2f6-R1_B23WHYVLT4_1.fusions.csv
- Full Path
- s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/9b/974f7559f40e7ea7f3e480142fc3e0/aih-tih-sc-13a2f6-R1_B23WHYVLT4_1.fusions.csv
- Size
- 913 bytes
- Task
- NFCORE_RNAFUSION:RNAFUSION:FUSIONREPORT_WORKFLOW:FUSIONREPORT (aih-tih-sc-13a2f6-R1_B23WHYVLT4_1)
- Attempt
Content
View in new tab| Fusion | Databases | Score | Explained score | arriba | starfusion |
| RSBN1--PTPN22 | Mitelman,FusionGDB2 | 0.375 | 0.5 * (0.125 + 0.125) + 0.5 * (0.500 + 0.000) | position: chr1:113811710#chr1:113834993,reading-frame: in-frame,type: duplication,split_reads1: 8,split_reads2: 8,discordant_mates: 0,coverage1: 419,coverage2: 155,confidence: high | position: chr1:113811710:-#chr1:113834993:-,junction_reads: 19,spanning_reads: 0,ffmp: 0.1823 |
| RUNX1--EPM2A | 0.125 | 0.5 * (0.125 + 0.125) + 0.5 * () | position: chr21:34859474#chr6:145384097,reading-frame: out-of-frame,type: translocation,split_reads1: 10,split_reads2: 4,discordant_mates: 0,coverage1: 2322,coverage2: 6,confidence: high | position: chr21:34859474:-#chr6:145384097:-,junction_reads: 14,spanning_reads: 0,ffmp: 0.1343 | |
| TLK2P1--AC110079.1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr17:34039043:-#chr4:118595912:+,junction_reads: 11,spanning_reads: 0,ffmp: 0.101 |
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