Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/63/2cc44ec071649b0b50f9c311b4517d/aih-tih-sc-976eb1-R1_B23WHYVLT4_1.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8d/e421d6d8d89e17c6e061aa20295d96/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8d/e421d6d8d89e17c6e061aa20295d96/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.csi: No such file or directory
ls: *.crai: No such file or directory