Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/92/e9a7b55535290711e042623bb0bcf6/aih-tih-sc-0a6b7b-R1_B23WHYVLT4_1.Aligned.sortedByCoord.out.bam.bai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/bb/013786bf60e48795a82bf865049234/ref_annot.bed
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d7/d45a094ff30363d4efef8a05386bdf/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d7/d45a094ff30363d4efef8a05386bdf/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0a/0e14d564c92aee90169d8f43a34879/aih-tih-sc-0a6b7b-R1_B23WHYVLT4_1.Aligned.sortedByCoord.out.bam
==> STAGING COMPLETE (5 inputs)

null device 
          1 
null device 
          1 
total = 341228437
[W::hts_idx_load3] The index file is older than the data file: aih-tih-sc-0a6b7b-R1_B23WHYVLT4_1.Aligned.sortedByCoord.out.bam.bai
Reading reference bed file:  ref_annot.bed  ...  Done
Load BAM file ...  Done

===================================================================
Total splicing  Events:	341228437
Known Splicing Events:	337749556
Partial Novel Splicing Events:	1469022
Novel Splicing Events:	1918376
Filtered Splicing Events:	91483

Total splicing  Junctions:	572750
Known Splicing Junctions:	282650
Partial Novel Splicing Junctions:	158353
Novel Splicing Junctions:	131747

===================================================================
Create BED file ...
Create Interact file ...