NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES (aih-tih-sc-d5506e-R1_B23WHYVLT4_1) - dev_rna_exp0018_2-73d51683 - Workflow Tracker

Runs
dev_rna_exp0.._2-73d51683
Tasks
GATK4_MARKDUPLICATES (aih-tih-sc-d5506e-R1_B23WHYVLT4_1)

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Task Info

Status: aborted
Hash: b5d0e3344d57
Process: NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES
Tag: aih-tih-sc-d5506e-R1_B23WHYVLT4_1
Attempts: 2

Attempt 2

Execution

Status: aborted
Hash: 9c/d6aa7a
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/mulled-v2-d9e7bad0f7fbc8f4458d5c3ab7ffaaf0235b59fb:f857e2d6cc88d35580d01cf39e0959a68b83c1d9-0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/9c/d6aa7aafd7659b68197da95268f870
Native ID: nf-9cd6aa7aafd7659b68197da95268f870-8bd24

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 148.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-05aa7b624ec70b1aa ( on-demand)

Runtime

Submitted: Jun 08, 2026 2:26:17 AM
Completed: Jun 08, 2026 2:41:37 AM
Total Duration: -

Phases

Queue: 1m 12s
Execution: -
Stage/Unstage: -

Attempt 1

Execution

Status: failed
Hash: 12/fc049f
Failure Reason: spot eviction ()
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/mulled-v2-d9e7bad0f7fbc8f4458d5c3ab7ffaaf0235b59fb:f857e2d6cc88d35580d01cf39e0959a68b83c1d9-0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/12/fc049f63c7050719ad5a35ad6c8dfe
Native ID: nf-12fc049f63c7050719ad5a35ad6c8dfe-4a9d3

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 74.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-01564d74d601ffe69 ( spot)

Runtime

Submitted: Jun 08, 2026 1:45:14 AM
Completed: Jun 08, 2026 2:26:17 AM
Total Duration: 41m 2s

Phases

Queue: 41m 2s
Execution: -
Stage/Unstage: -