Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/22/eeaf1dbd7f8c2c62d7c8c12a2edcab/aih-tih-sc-505123-R1_B23WHYVLT4_1_1.fastp.fastq.gz
Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/bb/11ceeeba51f3026f5cb0a0a68ba8b1/.command.sh
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/bb/11ceeeba51f3026f5cb0a0a68ba8b1/.command.run
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/22/eeaf1dbd7f8c2c62d7c8c12a2edcab/aih-tih-sc-505123-R1_B23WHYVLT4_1_2.fastp.fastq.gz
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/cc/a09e61136c259d28b3f82367af7c0c/aih-tih-sc-505123-R1_B23WHYVLT4_1.Chimeric.out.junction
==> STAGING COMPLETE (6 inputs)
-ctat genome lib [/tmp/nxf.68Ut0VzdfW/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.68Ut0VzdfW/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.68Ut0VzdfW/./star-fusion.preliminary
-sample contains 133409442 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes --genome_lib_dir /tmp/nxf.68Ut0VzdfW/ctat_genome_lib_build_dir -J /tmp/nxf.68Ut0VzdfW/aih-tih-sc-505123-R1_B23WHYVLT4_1.Chimeric.out.junction -O /tmp/nxf.68Ut0VzdfW/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4
-parsing fusion evidence: /tmp/nxf.68Ut0VzdfW/aih-tih-sc-505123-R1_B23WHYVLT4_1.Chimeric.out.junction
-building interval tree based on /tmp/nxf.68Ut0VzdfW/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.12 min).
-mapping reads to genes
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[1320000], rate=64705.88/min -building interval tree based on /tmp/nxf.68Ut0VzdfW/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.12 min).
-mapping reads to genes
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[1310000], rate=63695.30/min -building interval tree based on /tmp/nxf.68Ut0VzdfW/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.12 min).
-mapping reads to genes
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[1310000], rate=59142.21/min -building interval tree based on /tmp/nxf.68Ut0VzdfW/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.12 min).
-mapping reads to genes
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[1170000], rate=55847.26/min
[1180000], rate=55660.38/min
[1190000], rate=55564.20/min
[1200000], rate=55512.72/min
[1210000], rate=55419.85/min
[1220000], rate=55370.65/min
[1230000], rate=55322.34/min
[1240000], rate=55315.99/min
[1250000], rate=55350.55/min
[1260000], rate=55384.62/min
[1270000], rate=55458.52/min
[1280000], rate=55571.64/min
[1290000], rate=55683.45/min
[1300000], rate=55714.29/min
[1310000], rate=55823.86/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads -J /tmp/nxf.68Ut0VzdfW/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --genome_lib_dir /tmp/nxf.68Ut0VzdfW/ctat_genome_lib_build_dir --filt_file /tmp/nxf.68Ut0VzdfW/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail -M 50 > /tmp/nxf.68Ut0VzdfW/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-parsing /tmp/nxf.68Ut0VzdfW/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.
0.00 reads per min processed...
12000000.00 reads per min processed...
9000000.00 reads per min processed...
6000000.00 reads per min processed...
6000000.00 reads per min processed...
5142857.14 reads per min processed...
5250000.00 reads per min processed...
5333333.33 reads per min processed...
4909090.91 reads per min processed...
5000000.00 reads per min processed...
5076923.08 reads per min processed...
4800000.00 reads per min processed...
4875000.00 reads per min processed...
4666666.67 reads per min processed...
4736842.11 reads per min processed...
4571428.57 reads per min processed...
4636363.64 reads per min processed...
4500000.00 reads per min processed...
4560000.00 reads per min processed...
4615384.62 reads per min processed...
4500000.00 reads per min processed...
4551724.14 reads per min processed...
4600000.00 reads per min processed...
4500000.00 reads per min processed...
4545454.55 reads per min processed...
4727272.73 reads per min processed...
4764705.88 reads per min processed...
4800000.00 reads per min processed...
4833333.33 reads per min processed...
4736842.11 reads per min processed...
4769230.77 reads per min processed...
4800000.00 reads per min processed...
4829268.29 reads per min processed...
4744186.05 reads per min processed...
4772727.27 reads per min processed...
4695652.17 reads per min processed...
4723404.26 reads per min processed...
4750000.00 reads per min processed...
4680000.00 reads per min processed...
done.
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict -J /tmp/nxf.68Ut0VzdfW/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -O /tmp/nxf.68Ut0VzdfW/./star-fusion.preliminary/star-fusion
-parsing fusion evidence: /tmp/nxf.68Ut0VzdfW/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.68Ut0VzdfW/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter --fusion_preds /tmp/nxf.68Ut0VzdfW/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary -J /tmp/nxf.68Ut0VzdfW/aih-tih-sc-505123-R1_B23WHYVLT4_1.Chimeric.out.junction --tmpdir /tmp --min_junction_reads 0 --min_sum_frags 1 --require_LDAS 0 --max_promiscuity 10 --min_pct_dom_promiscuity 20 --min_novel_junction_support 1 --min_alt_pct_junction 10 --aggregate_novel_junction_dist 5 --min_spanning_frags_only 1 --genome_lib_dir /tmp/nxf.68Ut0VzdfW/ctat_genome_lib_build_dir --out_prefix /tmp/nxf.68Ut0VzdfW/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.68Ut0VzdfW/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -283070.896607
EM: Round [1] log likelihood: -282983.592113
EM: Round [2] log likelihood: -282949.892532
EM: Round [3] log likelihood: -282934.059091
EM: Round [4] log likelihood: -282925.874732
EM: Round [5] log likelihood: -282921.381596
EM: Round [6] log likelihood: -282918.792387
EM: Round [7] log likelihood: -282917.229122
EM: Round [8] log likelihood: -282916.239494
EM: Round [9] log likelihood: -282915.582644
EM: Round [10] log likelihood: -282915.126373
EM: Round [11] log likelihood: -282914.795818
EM: Round [12] log likelihood: -282914.547169
EM: Round [13] log likelihood: -282914.353905
EM: Round [14] log likelihood: -282914.199415
EM: Round [15] log likelihood: -282914.072948
EM: Round [16] log likelihood: -282913.967322
EM: Round [17] log likelihood: -282913.877595
EM: Round [18] log likelihood: -282913.800277
EM: Round [19] log likelihood: -282913.732837
EM: Round [20] log likelihood: -282913.673405
EM: Round [21] log likelihood: -282913.620565
EM: Round [22] log likelihood: -282913.573229
EM: Round [23] log likelihood: -282913.530546
EM: Round [24] log likelihood: -282913.491837
EM: Round [25] log likelihood: -282913.456559
EM: Round [26] log likelihood: -282913.424266
EM: Round [27] log likelihood: -282913.394592
EM: Round [28] log likelihood: -282913.367230
EM: Round [29] log likelihood: -282913.341924
EM: Round [30] log likelihood: -282913.318453
EM: Round [31] log likelihood: -282913.296631
EM: Round [32] log likelihood: -282913.276297
EM: Round [33] log likelihood: -282913.257311
EM: Round [34] log likelihood: -282913.239550
EM: Round [35] log likelihood: -282913.222907
EM: Round [36] log likelihood: -282913.207288
EM: Round [37] log likelihood: -282913.192609
EM: Round [38] log likelihood: -282913.178796
EM: Round [39] log likelihood: -282913.165781
EM: Round [40] log likelihood: -282913.153506
EM: Round [41] log likelihood: -282913.141916
EM: Round [42] log likelihood: -282913.130963
EM: Round [43] log likelihood: -282913.120603
EM: Round [44] log likelihood: -282913.110796
EM: Round [45] log likelihood: -282913.101505
EM: Round [46] log likelihood: -282913.092698
EM: Round [47] log likelihood: -282913.084344
EM: Round [48] log likelihood: -282913.076414
EM: Round [49] log likelihood: -282913.068883
EM: Round [50] log likelihood: -282913.061728
EM: Round [51] log likelihood: -282913.054927
EM: Round [52] log likelihood: -282913.048458
EM: Round [53] log likelihood: -282913.042304
EM: Round [54] log likelihood: -282913.036447
EM: Round [55] log likelihood: -282913.030871
EM: Round [56] log likelihood: -282913.025560
EM: Round [57] log likelihood: -282913.020500
EM: Round [58] log likelihood: -282913.015678
EM: Round [59] log likelihood: -282913.011081
EM: Round [60] log likelihood: -282913.006699
EM: Round [61] log likelihood: -282913.002520
EM: Round [62] log likelihood: -282912.998533
EM: Round [63] log likelihood: -282912.994729
EM: Round [64] log likelihood: -282912.991100
EM: Round [65] log likelihood: -282912.987635
EM: Round [66] log likelihood: -282912.984329
EM: Round [67] log likelihood: -282912.981172
EM: Round [68] log likelihood: -282912.978157
EM: Round [69] log likelihood: -282912.975278
EM: Round [70] log likelihood: -282912.972528
EM: Round [71] log likelihood: -282912.969902
EM: Round [72] log likelihood: -282912.967392
EM: Round [73] log likelihood: -282912.964995
EM: Round [74] log likelihood: -282912.962704
EM: Round [75] log likelihood: -282912.960515
EM: Round [76] log likelihood: -282912.958423
EM: Round [77] log likelihood: -282912.956423
EM: Round [78] log likelihood: -282912.954512
EM: Round [79] log likelihood: -282912.952685
EM: Round [80] log likelihood: -282912.950938
EM: Round [81] log likelihood: -282912.949268
EM: Round [82] log likelihood: -282912.947671
EM: Round [83] log likelihood: -282912.946145
EM: Round [84] log likelihood: -282912.944685
EM: Round [85] log likelihood: -282912.943289
EM: Round [86] log likelihood: -282912.941954
EM: Round [87] log likelihood: -282912.940677
EM: Round [88] log likelihood: -282912.939456
EM: Round [89] log likelihood: -282912.938288
EM: Round [90] log likelihood: -282912.937171
EM: Round [91] log likelihood: -282912.936103
EM: Round [92] log likelihood: -282912.935081
EM: Round [93] log likelihood: -282912.934103
EM: Round [94] log likelihood: -282912.933168
EM: Round [95] log likelihood: -282912.932273
EM: Round [96] log likelihood: -282912.931417
EM: Round [97] log likelihood: -282912.930598
EM: Round [98] log likelihood: -282912.929815
EM: Round [99] log likelihood: -282912.929065
EM: Round [100] log likelihood: -282912.928348
EM: Round [101] log likelihood: -282912.927662
EM: Round [102] log likelihood: -282912.927006
EM: Round [103] log likelihood: -282912.926378
EM: Round [104] log likelihood: -282912.925777
EM: Round [105] log likelihood: -282912.925201
EM: Round [106] log likelihood: -282912.924651
EM: Round [107] log likelihood: -282912.924124
EM: Round [108] log likelihood: -282912.923621
EM: Round [109] log likelihood: -282912.923138
EM: Round [110] log likelihood: -282912.922677
EM: Round [111] log likelihood: -282912.922235
EM: Round [112] log likelihood: -282912.921813
EM: Round [113] log likelihood: -282912.921408
EM: Round [114] log likelihood: -282912.921021
EM: Round [115] log likelihood: -282912.920651
EM: Round [116] log likelihood: -282912.920296
EM: Round [117] log likelihood: -282912.919957
EM: Round [118] log likelihood: -282912.919632
EM: Round [119] log likelihood: -282912.919322
EM: Round [120] log likelihood: -282912.919024
EM: Round [121] log likelihood: -282912.918739
EM: Round [122] log likelihood: -282912.918467
EM: Round [123] log likelihood: -282912.918206
EM: Round [124] log likelihood: -282912.917957
EM: Round [125] log likelihood: -282912.917718
EM: Round [126] log likelihood: -282912.917489
EM: Round [127] log likelihood: -282912.917270
EM: Round [128] log likelihood: -282912.917061
EM: Round [129] log likelihood: -282912.916860
EM: Round [130] log likelihood: -282912.916669
EM: Round [131] log likelihood: -282912.916485
EM: Round [132] log likelihood: -282912.916309
EM: Round [133] log likelihood: -282912.916141
EM: Round [134] log likelihood: -282912.915980
EM: Round [135] log likelihood: -282912.915826
EM: Round [136] log likelihood: -282912.915678
EM: Round [137] log likelihood: -282912.915537
EM: Round [138] log likelihood: -282912.915402
EM: Round [139] log likelihood: -282912.915272
EM: Round [140] log likelihood: -282912.915148
EM: Round [141] log likelihood: -282912.915030
EM: Round [142] log likelihood: -282912.914916
EM: Round [143] log likelihood: -282912.914808
EM: Round [144] log likelihood: -282912.914703
EM: Round [145] log likelihood: -282912.914604
EM: Stopping iterations at round 145 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -282956.779273
EM: Round [1] log likelihood: -282881.991964
EM: Round [2] log likelihood: -282853.961778
EM: Round [3] log likelihood: -282840.940144
EM: Round [4] log likelihood: -282834.225724
EM: Round [5] log likelihood: -282830.553661
EM: Round [6] log likelihood: -282828.458458
EM: Round [7] log likelihood: -282827.215337
EM: Round [8] log likelihood: -282826.447894
EM: Round [9] log likelihood: -282825.954577
EM: Round [10] log likelihood: -282825.624511
EM: Round [11] log likelihood: -282825.394986
EM: Round [12] log likelihood: -282825.229489
EM: Round [13] log likelihood: -282825.106116
EM: Round [14] log likelihood: -282825.011331
EM: Round [15] log likelihood: -282824.936522
EM: Round [16] log likelihood: -282824.876056
EM: Round [17] log likelihood: -282824.826151
EM: Round [18] log likelihood: -282824.784205
EM: Round [19] log likelihood: -282824.748389
EM: Round [20] log likelihood: -282824.717385
EM: Round [21] log likelihood: -282824.690231
EM: Round [22] log likelihood: -282824.666207
EM: Round [23] log likelihood: -282824.644766
EM: Round [24] log likelihood: -282824.625487
EM: Round [25] log likelihood: -282824.608041
EM: Round [26] log likelihood: -282824.592163
EM: Round [27] log likelihood: -282824.577644
EM: Round [28] log likelihood: -282824.564310
EM: Round [29] log likelihood: -282824.552020
EM: Round [30] log likelihood: -282824.540654
EM: Round [31] log likelihood: -282824.530114
EM: Round [32] log likelihood: -282824.520314
EM: Round [33] log likelihood: -282824.511181
EM: Round [34] log likelihood: -282824.502653
EM: Round [35] log likelihood: -282824.494675
EM: Round [36] log likelihood: -282824.487199
EM: Round [37] log likelihood: -282824.480183
EM: Round [38] log likelihood: -282824.473589
EM: Round [39] log likelihood: -282824.467386
EM: Round [40] log likelihood: -282824.461542
EM: Round [41] log likelihood: -282824.456031
EM: Round [42] log likelihood: -282824.450831
EM: Round [43] log likelihood: -282824.445918
EM: Round [44] log likelihood: -282824.441273
EM: Round [45] log likelihood: -282824.436878
EM: Round [46] log likelihood: -282824.432718
EM: Round [47] log likelihood: -282824.428776
EM: Round [48] log likelihood: -282824.425040
EM: Round [49] log likelihood: -282824.421497
EM: Round [50] log likelihood: -282824.418135
EM: Round [51] log likelihood: -282824.414943
EM: Round [52] log likelihood: -282824.411912
EM: Round [53] log likelihood: -282824.409032
EM: Round [54] log likelihood: -282824.406294
EM: Round [55] log likelihood: -282824.403692
EM: Round [56] log likelihood: -282824.401216
EM: Round [57] log likelihood: -282824.398861
EM: Round [58] log likelihood: -282824.396620
EM: Round [59] log likelihood: -282824.394487
EM: Round [60] log likelihood: -282824.392456
EM: Round [61] log likelihood: -282824.390522
EM: Round [62] log likelihood: -282824.388680
EM: Round [63] log likelihood: -282824.386925
EM: Round [64] log likelihood: -282824.385252
EM: Round [65] log likelihood: -282824.383659
EM: Round [66] log likelihood: -282824.382139
EM: Round [67] log likelihood: -282824.380691
EM: Round [68] log likelihood: -282824.379310
EM: Round [69] log likelihood: -282824.377993
EM: Round [70] log likelihood: -282824.376737
EM: Round [71] log likelihood: -282824.375539
EM: Round [72] log likelihood: -282824.374396
EM: Round [73] log likelihood: -282824.373306
EM: Round [74] log likelihood: -282824.372266
EM: Round [75] log likelihood: -282824.371273
EM: Round [76] log likelihood: -282824.370326
EM: Round [77] log likelihood: -282824.369422
EM: Round [78] log likelihood: -282824.368559
EM: Round [79] log likelihood: -282824.367735
EM: Round [80] log likelihood: -282824.366949
EM: Round [81] log likelihood: -282824.366199
EM: Round [82] log likelihood: -282824.365482
EM: Round [83] log likelihood: -282824.364798
EM: Round [84] log likelihood: -282824.364145
EM: Round [85] log likelihood: -282824.363521
EM: Round [86] log likelihood: -282824.362926
EM: Round [87] log likelihood: -282824.362357
EM: Round [88] log likelihood: -282824.361814
EM: Round [89] log likelihood: -282824.361296
EM: Round [90] log likelihood: -282824.360800
EM: Round [91] log likelihood: -282824.360327
EM: Round [92] log likelihood: -282824.359876
EM: Round [93] log likelihood: -282824.359444
EM: Round [94] log likelihood: -282824.359032
EM: Round [95] log likelihood: -282824.358638
EM: Round [96] log likelihood: -282824.358262
EM: Round [97] log likelihood: -282824.357903
EM: Round [98] log likelihood: -282824.357559
EM: Round [99] log likelihood: -282824.357232
EM: Round [100] log likelihood: -282824.356918
EM: Round [101] log likelihood: -282824.356619
EM: Round [102] log likelihood: -282824.356333
EM: Round [103] log likelihood: -282824.356060
EM: Round [104] log likelihood: -282824.355799
EM: Round [105] log likelihood: -282824.355550
EM: Round [106] log likelihood: -282824.355312
EM: Round [107] log likelihood: -282824.355084
EM: Round [108] log likelihood: -282824.354867
EM: Round [109] log likelihood: -282824.354659
EM: Round [110] log likelihood: -282824.354460
EM: Round [111] log likelihood: -282824.354271
EM: Round [112] log likelihood: -282824.354089
EM: Round [113] log likelihood: -282824.353916
EM: Round [114] log likelihood: -282824.353751
EM: Round [115] log likelihood: -282824.353593
EM: Round [116] log likelihood: -282824.353442
EM: Round [117] log likelihood: -282824.353297
EM: Round [118] log likelihood: -282824.353159
EM: Round [119] log likelihood: -282824.353027
EM: Round [120] log likelihood: -282824.352901
EM: Round [121] log likelihood: -282824.352781
EM: Round [122] log likelihood: -282824.352666
EM: Round [123] log likelihood: -282824.352556
EM: Round [124] log likelihood: -282824.352451
EM: Round [125] log likelihood: -282824.352350
EM: Round [126] log likelihood: -282824.352254
EM: Stopping iterations at round 126 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.68Ut0VzdfW/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20 --fusion_preds /tmp/nxf.68Ut0VzdfW/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.68Ut0VzdfW/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.68Ut0VzdfW/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.68Ut0VzdfW/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.68Ut0VzdfW/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter --genome_lib_dir /tmp/nxf.68Ut0VzdfW/ctat_genome_lib_build_dir --max_promiscuity 10 --min_pct_dom_promiscuity 20
CMD: cp /tmp/nxf.68Ut0VzdfW/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.68Ut0VzdfW/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.68Ut0VzdfW/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.68Ut0VzdfW/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.68Ut0VzdfW/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.68Ut0VzdfW/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.68Ut0VzdfW/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 133409442 > /tmp/nxf.68Ut0VzdfW/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.68Ut0VzdfW/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.68Ut0VzdfW/ctat_genome_lib_build_dir > /tmp/nxf.68Ut0VzdfW/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.68Ut0VzdfW/ctat_genome_lib_build_dir --annotate /tmp/nxf.68Ut0VzdfW/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.68Ut0VzdfW/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.68Ut0VzdfW/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.68Ut0VzdfW/ctat_genome_lib_build_dir
-done, see /tmp/nxf.68Ut0VzdfW/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.68Ut0VzdfW/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.68Ut0VzdfW/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 2670, filtered: 10407)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.68Ut0VzdfW/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.68Ut0VzdfW/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.68Ut0VzdfW/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [ENSG00000239268.3]
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WARNING, no entry stored in dbm for [ENSG00000261008.7]
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WARNING, no entry stored in dbm for [ENSG00000225975.7]
WARNING, no entry stored in dbm for [ENSG00000235437.8]
WARNING, no entry stored in dbm for [ENSG00000236511.2]
WARNING, no entry stored in dbm for [ENSG00000236963.7]
WARNING, no entry stored in dbm for [ENSG00000228794.10]
WARNING, no entry stored in dbm for [ENSG00000227676.4]
WARNING, no entry stored in dbm for [ENSG00000282508.2]
WARNING, no entry stored in dbm for [ENSG00000241769.7]
WARNING, no entry stored in dbm for [ENSG00000215190.9]
WARNING, no entry stored in dbm for [ENSG00000231028.9]
WARNING, no entry stored in dbm for [ENSG00000283945.1]
WARNING, no entry stored in dbm for [ENSG00000230305.2]
WARNING, no entry stored in dbm for [ENSG00000265480.5]
WARNING, no entry stored in dbm for [ENSG00000185485.14]
WARNING, no entry stored in dbm for [ENSG00000239569.3]
WARNING, no entry stored in dbm for [ENSG00000233652.1]
WARNING, no entry stored in dbm for [ENSG00000279278.1]
WARNING, no entry stored in dbm for [ENSG00000255094.1]
WARNING, no entry stored in dbm for [ENSG00000286636.1]
WARNING, no entry stored in dbm for [ENSG00000272578.5]
WARNING, no entry stored in dbm for [ENSG00000197332.9]
WARNING, no entry stored in dbm for [ENSG00000215302.8]
WARNING, no entry stored in dbm for [ENSG00000259218.6]
WARNING, no entry stored in dbm for [ENSG00000197536.11]
WARNING, no entry stored in dbm for [ENSG00000272871.1]
WARNING, no entry stored in dbm for [ENSG00000228564.2]
WARNING, no entry stored in dbm for [ENSG00000215302.8]
WARNING, no entry stored in dbm for [ENSG00000224082.1]
WARNING, no entry stored in dbm for [ENSG00000244926.7]
WARNING, no entry stored in dbm for [ENSG00000259838.1]
WARNING, no entry stored in dbm for [ENSG00000236679.2]
WARNING, no entry stored in dbm for [ENSG00000235864.1]
WARNING, no entry stored in dbm for [ENSG00000275374.1]
WARNING, no entry stored in dbm for [ENSG00000255141.1]
WARNING, no entry stored in dbm for [ENSG00000227638.2]
WARNING, no entry stored in dbm for [ENSG00000230330.1]
WARNING, no entry stored in dbm for [ENSG00000253774.1]
WARNING, no entry stored in dbm for [ENSG00000260828.1]
WARNING, no entry stored in dbm for [ENSG00000254146.1]
WARNING, no entry stored in dbm for [ENSG00000276550.4]
WARNING, no entry stored in dbm for [ENSG00000228624.7]
WARNING, no entry stored in dbm for [ENSG00000232940.6]
WARNING, no entry stored in dbm for [ENSG00000231074.9]
WARNING, no entry stored in dbm for [ENSG00000240680.1]
WARNING, no entry stored in dbm for [ENSG00000248205.1]
WARNING, no entry stored in dbm for [ENSG00000218502.3]
WARNING, no entry stored in dbm for [ENSG00000206417.8]
WARNING, no entry stored in dbm for [ENSG00000183666.17]
WARNING, no entry stored in dbm for [ENSG00000251250.3]
WARNING, no entry stored in dbm for [ENSG00000189275.4]
WARNING, no entry stored in dbm for [ENSG00000259683.1]
WARNING, no entry stored in dbm for [ENSG00000277561.5]
WARNING, no entry stored in dbm for [ENSG00000267419.2]
WARNING, no entry stored in dbm for [ENSG00000250959.2]
WARNING, no entry stored in dbm for [ENSG00000204872.4]
WARNING, no entry stored in dbm for [ENSG00000272396.1]
WARNING, no entry stored in dbm for [ENSG00000214826.5]
WARNING, no entry stored in dbm for [ENSG00000224477.5]
WARNING, no entry stored in dbm for [ENSG00000235120.1]
WARNING, no entry stored in dbm for [ENSG00000283698.1]
WARNING, no entry stored in dbm for [ENSG00000196295.12]
WARNING, no entry stored in dbm for [ENSG00000127589.4]
WARNING, no entry stored in dbm for [ENSG00000230590.11]
WARNING, no entry stored in dbm for [ENSG00000177822.8]
WARNING, no entry stored in dbm for [ENSG00000223695.1]
WARNING, no entry stored in dbm for [ENSG00000287797.1]
WARNING, no entry stored in dbm for [ENSG00000287532.1]
WARNING, no entry stored in dbm for [ENSG00000258535.1]
WARNING, no entry stored in dbm for [ENSG00000235768.1]
WARNING, no entry stored in dbm for [ENSG00000180178.11]
WARNING, no entry stored in dbm for [ENSG00000214900.11]
WARNING, no entry stored in dbm for [ENSG00000236438.7]
WARNING, no entry stored in dbm for [ENSG00000234709.2]
WARNING, no entry stored in dbm for [ENSG00000241735.2]
WARNING, no entry stored in dbm for [ENSG00000259837.1]
WARNING, no entry stored in dbm for [ENSG00000283235.2]
WARNING, no entry stored in dbm for [ENSG00000271860.7]
WARNING, no entry stored in dbm for [ENSG00000215154.6]
WARNING, no entry stored in dbm for [ENSG00000259993.1]
WARNING, no entry stored in dbm for [ENSG00000215302.8]
WARNING, no entry stored in dbm for [ENSG00000250016.2]
WARNING, no entry stored in dbm for [ENSG00000260211.2]
WARNING, no entry stored in dbm for [ENSG00000273711.2]
WARNING, no entry stored in dbm for [ENSG00000233642.1]
WARNING, no entry stored in dbm for [ENSG00000196312.15]
WARNING, no entry stored in dbm for [ENSG00000229140.11]
WARNING, no entry stored in dbm for [ENSG00000246308.2]
WARNING, no entry stored in dbm for [ENSG00000225728.2]
WARNING, no entry stored in dbm for [ENSG00000254275.6]
WARNING, no entry stored in dbm for [ENSG00000215256.4]
WARNING, no entry stored in dbm for [ENSG00000179447.2]
WARNING, no entry stored in dbm for [ENSG00000226950.8]
WARNING, no entry stored in dbm for [ENSG00000254363.6]
WARNING, no entry stored in dbm for [ENSG00000254363.6]
WARNING, no entry stored in dbm for [ENSG00000245293.3]
WARNING, no entry stored in dbm for [ENSG00000280018.4]
WARNING, no entry stored in dbm for [ENSG00000278903.3]
WARNING, no entry stored in dbm for [ENSG00000276077.4]
WARNING, no entry stored in dbm for [ENSG00000100058.12]
WARNING, no entry stored in dbm for [ENSG00000100058.12]
WARNING, no entry stored in dbm for [ENSG00000215908.10]
WARNING, no entry stored in dbm for [ENSG00000237773.7]
WARNING, no entry stored in dbm for [ENSG00000226427.1]
WARNING, no entry stored in dbm for [ENSG00000253200.1]
WARNING, no entry stored in dbm for [ENSG00000235038.1]
WARNING, no entry stored in dbm for [ENSG00000283541.1]
WARNING, no entry stored in dbm for [ENSG00000234705.2]
WARNING, no entry stored in dbm for [ENSG00000248319.2]
WARNING, no entry stored in dbm for [ENSG00000242070.1]
WARNING, no entry stored in dbm for [ENSG00000205559.5]
WARNING, no entry stored in dbm for [ENSG00000263072.8]
WARNING, no entry stored in dbm for [ENSG00000285632.1]
WARNING, no entry stored in dbm for [ENSG00000251504.1]
WARNING, no entry stored in dbm for [ENSG00000230733.2]
WARNING, no entry stored in dbm for [ENSG00000197099.8]
WARNING, no entry stored in dbm for [ENSG00000223773.7]
WARNING, no entry stored in dbm for [ENSG00000286277.1]
WARNING, no entry stored in dbm for [ENSG00000273145.1]
WARNING, no entry stored in dbm for [ENSG00000275374.1]
WARNING, no entry stored in dbm for [ENSG00000286678.1]
WARNING, no entry stored in dbm for [ENSG00000223745.8]
WARNING, no entry stored in dbm for [ENSG00000203799.13]
WARNING, no entry stored in dbm for [ENSG00000250778.1]
WARNING, no entry stored in dbm for [ENSG00000233098.9]
WARNING, no entry stored in dbm for [ENSG00000230773.9]
WARNING, no entry stored in dbm for [ENSG00000239521.9]
WARNING, no entry stored in dbm for [ENSG00000231933.7]
WARNING, no entry stored in dbm for [ENSG00000260071.2]
WARNING, no entry stored in dbm for [ENSG00000272870.3]
WARNING, no entry stored in dbm for [ENSG00000230131.6]
WARNING, no entry stored in dbm for [ENSG00000231607.13]
WARNING, no entry stored in dbm for [ENSG00000270025.2]
WARNING, no entry stored in dbm for [ENSG00000243289.1]
WARNING, no entry stored in dbm for [ENSG00000204177.10]
WARNING, no entry stored in dbm for [ENSG00000204177.10]
WARNING, no entry stored in dbm for [ENSG00000204177.10]
WARNING, no entry stored in dbm for [ENSG00000204177.10]
WARNING, no entry stored in dbm for [ENSG00000279058.2]
WARNING, no entry stored in dbm for [ENSG00000225005.1]
WARNING, no entry stored in dbm for [ENSG00000245573.9]
WARNING, no entry stored in dbm for [ENSG00000231615.2]
WARNING, no entry stored in dbm for [ENSG00000233242.3]
WARNING, no entry stored in dbm for [ENSG00000271699.5]
WARNING, no entry stored in dbm for [ENSG00000236064.2]
WARNING, no entry stored in dbm for [ENSG00000261800.2]
WARNING, no entry stored in dbm for [ENSG00000278903.3]
WARNING, no entry stored in dbm for [ENSG00000260926.3]
WARNING, no entry stored in dbm for [ENSG00000250922.1]
WARNING, no entry stored in dbm for [ENSG00000229405.1]
WARNING, no entry stored in dbm for [ENSG00000269069.1]
WARNING, no entry stored in dbm for [ENSG00000244198.7]
WARNING, no entry stored in dbm for [ENSG00000273492.6]
WARNING, no entry stored in dbm for [ENSG00000206593.1]
WARNING, no entry stored in dbm for [ENSG00000254590.1]
WARNING, no entry stored in dbm for [ENSG00000196312.15]
WARNING, no entry stored in dbm for [ENSG00000256591.5]
WARNING, no entry stored in dbm for [ENSG00000250519.7]
WARNING, no entry stored in dbm for [ENSG00000224905.7]
WARNING, no entry stored in dbm for [ENSG00000224905.7]
WARNING, no entry stored in dbm for [ENSG00000266456.1]
WARNING, no entry stored in dbm for [ENSG00000255291.2]
WARNING, no entry stored in dbm for [ENSG00000241231.2]
WARNING, no entry stored in dbm for [ENSG00000242953.1]
WARNING, no entry stored in dbm for [ENSG00000248973.3]
WARNING, no entry stored in dbm for [ENSG00000215067.10]
WARNING, no entry stored in dbm for [ENSG00000284676.1]
WARNING, no entry stored in dbm for [ENSG00000285799.1]
WARNING, no entry stored in dbm for [ENSG00000240963.1]
WARNING, no entry stored in dbm for [ENSG00000285833.1]
WARNING, no entry stored in dbm for [ENSG00000227885.3]
WARNING, no entry stored in dbm for [ENSG00000224340.1]
WARNING, no entry stored in dbm for [ENSG00000225419.1]
WARNING, no entry stored in dbm for [ENSG00000227463.3]
WARNING, no entry stored in dbm for [ENSG00000233262.1]
WARNING, no entry stored in dbm for [ENSG00000217801.10]
WARNING, no entry stored in dbm for [ENSG00000228685.1]
WARNING, no entry stored in dbm for [ENSG00000234851.4]
WARNING, no entry stored in dbm for [ENSG00000270103.3]
WARNING, no entry stored in dbm for [ENSG00000227683.1]
WARNING, no entry stored in dbm for [ENSG00000278531.1]
WARNING, no entry stored in dbm for [ENSG00000285649.1]
WARNING, no entry stored in dbm for [ENSG00000273507.5]
WARNING, no entry stored in dbm for [ENSG00000165121.11]
WARNING, no entry stored in dbm for [ENSG00000237761.3]
WARNING, no entry stored in dbm for [ENSG00000228830.1]
WARNING, no entry stored in dbm for [ENSG00000258656.1]
WARNING, no entry stored in dbm for [ENSG00000258656.1]
WARNING, no entry stored in dbm for [ENSG00000232702.3]
WARNING, no entry stored in dbm for [ENSG00000230490.3]
WARNING, no entry stored in dbm for [ENSG00000287826.1]
WARNING, no entry stored in dbm for [ENSG00000233183.3]
WARNING, no entry stored in dbm for [ENSG00000287708.1]
WARNING, no entry stored in dbm for [ENSG00000183506.17]
WARNING, no entry stored in dbm for [ENSG00000235122.4]
WARNING, no entry stored in dbm for [ENSG00000258734.2]
WARNING, no entry stored in dbm for [ENSG00000274760.1]
WARNING, no entry stored in dbm for [ENSG00000288543.1]
WARNING, no entry stored in dbm for [ENSG00000288543.1]
WARNING, no entry stored in dbm for [ENSG00000288543.1]
WARNING, no entry stored in dbm for [ENSG00000235189.2]
WARNING, no entry stored in dbm for [ENSG00000280114.1]
WARNING, no entry stored in dbm for [ENSG00000280114.1]
WARNING, no entry stored in dbm for [ENSG00000285922.1]
WARNING, no entry stored in dbm for [ENSG00000285646.2]
WARNING, no entry stored in dbm for [ENSG00000257199.2]
WARNING, no entry stored in dbm for [ENSG00000215158.9]
WARNING, no entry stored in dbm for [ENSG00000285755.2]
WARNING, no entry stored in dbm for [ENSG00000279058.2]
WARNING, no entry stored in dbm for [ENSG00000230869.1]
WARNING, no entry stored in dbm for [ENSG00000223959.8]
WARNING, no entry stored in dbm for [ENSG00000261628.1]
WARNING, no entry stored in dbm for [ENSG00000200131.1]
WARNING, no entry stored in dbm for [ENSG00000286912.1]
WARNING, no entry stored in dbm for [ENSG00000286912.1]
WARNING, no entry stored in dbm for [ENSG00000239482.6]
WARNING, no entry stored in dbm for [ENSG00000276216.1]
WARNING, no entry stored in dbm for [ENSG00000237550.5]
WARNING, no entry stored in dbm for [ENSG00000237550.5]
WARNING, no entry stored in dbm for [ENSG00000261499.2]
WARNING, no entry stored in dbm for [ENSG00000261499.2]
WARNING, no entry stored in dbm for [ENSG00000261499.2]
WARNING, no entry stored in dbm for [ENSG00000275121.1]
WARNING, no entry stored in dbm for [ENSG00000254701.3]
WARNING, no entry stored in dbm for [ENSG00000264956.2]
WARNING, no entry stored in dbm for [ENSG00000215158.9]
WARNING, no entry stored in dbm for [ENSG00000264148.1]
WARNING, no entry stored in dbm for [ENSG00000250999.2]
WARNING, no entry stored in dbm for [ENSG00000266490.1]
WARNING, no entry stored in dbm for [ENSG00000264538.6]
WARNING, no entry stored in dbm for [ENSG00000279613.1]
WARNING, no entry stored in dbm for [ENSG00000280117.1]
WARNING, no entry stored in dbm for [ENSG00000240695.1]
WARNING, no entry stored in dbm for [ENSG00000275374.1]
WARNING, no entry stored in dbm for [ENSG00000249444.2]
WARNING, no entry stored in dbm for [ENSG00000222022.1]
WARNING, no entry stored in dbm for [ENSG00000259607.1]
WARNING, no entry stored in dbm for [ENSG00000277332.1]
WARNING, no entry stored in dbm for [ENSG00000231329.8]
WARNING, no entry stored in dbm for [ENSG00000259891.1]
WARNING, no entry stored in dbm for [ENSG00000250159.7]
WARNING, no entry stored in dbm for [ENSG00000251314.2]
WARNING, no entry stored in dbm for [ENSG00000286152.1]
WARNING, no entry stored in dbm for [ENSG00000249741.2]
WARNING, no entry stored in dbm for [ENSG00000242474.3]
WARNING, no entry stored in dbm for [ENSG00000214147.2]
WARNING, no entry stored in dbm for [ENSG00000284687.1]
WARNING, no entry stored in dbm for [ENSG00000284605.1]
WARNING, no entry stored in dbm for [ENSG00000288633.1]
WARNING, no entry stored in dbm for [ENSG00000187953.10]
WARNING, no entry stored in dbm for [ENSG00000267198.1]
WARNING, no entry stored in dbm for [ENSG00000285035.1]
WARNING, no entry stored in dbm for [ENSG00000285035.1]
WARNING, no entry stored in dbm for [ENSG00000285035.1]
WARNING, no entry stored in dbm for [ENSG00000257239.1]
WARNING, no entry stored in dbm for [ENSG00000266379.6]
WARNING, no entry stored in dbm for [ENSG00000262879.6]
WARNING, no entry stored in dbm for [ENSG00000255094.1]
WARNING, no entry stored in dbm for [ENSG00000259347.7]
WARNING, no entry stored in dbm for [ENSG00000286699.1]
WARNING, no entry stored in dbm for [ENSG00000246528.3]
WARNING, no entry stored in dbm for [ENSG00000268620.1]
WARNING, no entry stored in dbm for [ENSG00000286035.1]
WARNING, no entry stored in dbm for [ENSG00000288663.1]
WARNING, no entry stored in dbm for [ENSG00000234129.8]
WARNING, no entry stored in dbm for [ENSG00000239985.2]
WARNING, no entry stored in dbm for [ENSG00000283674.3]
WARNING, no entry stored in dbm for [ENSG00000259235.2]
WARNING, no entry stored in dbm for [ENSG00000282980.1]
WARNING, no entry stored in dbm for [ENSG00000236814.1]
WARNING, no entry stored in dbm for [ENSG00000249878.1]
WARNING, no entry stored in dbm for [ENSG00000254485.5]
WARNING, no entry stored in dbm for [ENSG00000215068.8]
WARNING, no entry stored in dbm for [ENSG00000267709.1]
WARNING, no entry stored in dbm for [ENSG00000230649.3]
WARNING, no entry stored in dbm for [ENSG00000255511.1]
WARNING, no entry stored in dbm for [ENSG00000272800.3]
WARNING, no entry stored in dbm for [ENSG00000273674.5]
WARNING, no entry stored in dbm for [ENSG00000259407.1]
WARNING, no entry stored in dbm for [ENSG00000240975.1]
WARNING, no entry stored in dbm for [ENSG00000267640.6]
WARNING, no entry stored in dbm for [ENSG00000288604.1]
WARNING, no entry stored in dbm for [ENSG00000270977.2]
WARNING, no entry stored in dbm for [ENSG00000267078.1]
WARNING, no entry stored in dbm for [ENSG00000232386.9]
WARNING, no entry stored in dbm for [ENSG00000259345.7]
WARNING, no entry stored in dbm for [ENSG00000236478.2]
WARNING, no entry stored in dbm for [ENSG00000225636.1]
WARNING, no entry stored in dbm for [ENSG00000228251.1]
WARNING, no entry stored in dbm for [ENSG00000286721.1]
WARNING, no entry stored in dbm for [ENSG00000226764.2]
WARNING, no entry stored in dbm for [ENSG00000265018.6]
WARNING, no entry stored in dbm for [ENSG00000247121.7]
WARNING, no entry stored in dbm for [ENSG00000259933.6]
WARNING, no entry stored in dbm for [ENSG00000214331.8]
WARNING, no entry stored in dbm for [ENSG00000214331.8]
WARNING, no entry stored in dbm for [ENSG00000214331.8]
WARNING, no entry stored in dbm for [ENSG00000260905.1]
WARNING, no entry stored in dbm for [ENSG00000284671.1]
WARNING, no entry stored in dbm for [ENSG00000250258.1]
WARNING, no entry stored in dbm for [ENSG00000268401.2]
WARNING, no entry stored in dbm for [ENSG00000267922.1]
WARNING, no entry stored in dbm for [ENSG00000251660.1]
WARNING, no entry stored in dbm for [ENSG00000284052.1]
WARNING, no entry stored in dbm for [ENSG00000263345.1]
WARNING, no entry stored in dbm for [ENSG00000236531.2]
WARNING, no entry stored in dbm for [ENSG00000266933.2]
WARNING, no entry stored in dbm for [ENSG00000262879.6]
WARNING, no entry stored in dbm for [ENSG00000279726.2]
WARNING, no entry stored in dbm for [ENSG00000227606.2]
WARNING, no entry stored in dbm for [ENSG00000274712.2]
WARNING, no entry stored in dbm for [ENSG00000214425.8]
WARNING, no entry stored in dbm for [ENSG00000278920.1]
WARNING, no entry stored in dbm for [ENSG00000230305.2]
WARNING, no entry stored in dbm for [ENSG00000214243.3]
WARNING, no entry stored in dbm for [ENSG00000230305.2]
WARNING, no entry stored in dbm for [ENSG00000239556.4]
WARNING, no entry stored in dbm for [ENSG00000214243.3]
WARNING, no entry stored in dbm for [ENSG00000205485.13]
WARNING, no entry stored in dbm for [ENSG00000239556.4]
WARNING, no entry stored in dbm for [ENSG00000239556.4]
WARNING, no entry stored in dbm for [ENSG00000230305.2]
WARNING, no entry stored in dbm for [ENSG00000254610.3]
WARNING, no entry stored in dbm for [ENSG00000232677.9]
WARNING, no entry stored in dbm for [ENSG00000254610.3]
WARNING, no entry stored in dbm for [ENSG00000255367.3]
WARNING, no entry stored in dbm for [ENSG00000282943.1]
WARNING, no entry stored in dbm for [ENSG00000257433.6]
WARNING, no entry stored in dbm for [ENSG00000279159.1]
WARNING, no entry stored in dbm for [ENSG00000279689.1]
WARNING, no entry stored in dbm for [ENSG00000283366.2]
WARNING, no entry stored in dbm for [ENSG00000250379.1]
WARNING, no entry stored in dbm for [ENSG00000251595.7]
* STAR-Fusion complete. See output: /tmp/nxf.68Ut0VzdfW/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)