Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/75/9316e7ff1937ed3df0f7400e531c4b/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3c/1b54e0fbfeffed96fe192c991ec41c/aih-tih-sc-13a2f6-R1_B23WHYVLT4_1
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/75/9316e7ff1937ed3df0f7400e531c4b/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/21/bf763cfb852f3cc4773bac5ecfee04/aih-tih-sc-13a2f6-R1_B23WHYVLT4_1.sample_qc.tsv
==> STAGING COMPLETE (4 inputs)

Processing Kallisto file: aih-tih-sc-13a2f6-R1_B23WHYVLT4_1/abundance.h5
Successfully converted aih-tih-sc-13a2f6-R1_B23WHYVLT4_1/abundance.h5 to aih-tih-sc-13a2f6-R1_B23WHYVLT4_1_kallisto_mqc.tsv
  Sample: aih-tih-sc-13a2f6-R1_B23WHYVLT4_1
  Mean Fragment Length: 116.1 bp
  Median Fragment Length: 110.0 bp
  pct_mito_est_counts: 0.027%
  pct_ribo_est_counts: 1.107%
  pct_hk_est_counts: 0.493%
  pct_male_est_counts: 0.0%
  pct_mito_tpm: 0.061%
  pct_ribo_tpm: 3.624%
  pct_hk_tpm: 0.797%
  pct_male_tpm: 0.0%
  score_log2tpm1_mean_chry_signature: 0.018%