Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/6f/8796174784d5e7bedef3aa8b0128ab/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/49/891a5f4d0d1e8374f7c1b5acb77d7a/aih-tih-sc-79f487-R1_B23WHYVLT4_1.star_alignment.Aligned.sortedByCoord.out.cram
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/6f/8796174784d5e7bedef3aa8b0128ab/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.bai: No such file or directory
ls: *.csi: No such file or directory