File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/67/e00c42f8a68df19dbf51d6f8de308b/.command.err
Size
324.1 KB
Attempt
Using GATK jar /usr/local/share/gatk4-4.4.0.0-0/gatk-package-4.4.0.0-local.jar
Running:
    java -Dsamjdk.use_async_io_read_samtools=false -Dsamjdk.use_async_io_write_samtools=true -Dsamjdk.use_async_io_write_tribble=false -Dsamjdk.compression_level=2 -Xmx60620M -XX:-UsePerfData -XX:ParallelGCThreads=2 -jar /usr/local/share/gatk4-4.4.0.0-0/gatk-package-4.4.0.0-local.jar MarkDuplicates --INPUT aih-tih-sc-1ba302-R1_B23WHYVLT4_1.Aligned.sortedByCoord.out.bam --OUTPUT aih-tih-sc-1ba302-R1_B23WHYVLT4_1.md.bam --METRICS_FILE aih-tih-sc-1ba302-R1_B23WHYVLT4_1.md.bam.metrics --TMP_DIR . --CREATE_INDEX true --REFERENCE_SEQUENCE ref_genome.fa -REMOVE_DUPLICATES false -VALIDATION_STRINGENCY LENIENT
08:38:08.625 INFO  NativeLibraryLoader - Loading libgkl_compression.so from jar:file:/usr/local/share/gatk4-4.4.0.0-0/gatk-package-4.4.0.0-local.jar!/com/intel/gkl/native/libgkl_compression.so
[Mon Jun 08 08:38:08 GMT 2026] MarkDuplicates --INPUT aih-tih-sc-1ba302-R1_B23WHYVLT4_1.Aligned.sortedByCoord.out.bam --OUTPUT aih-tih-sc-1ba302-R1_B23WHYVLT4_1.md.bam --METRICS_FILE aih-tih-sc-1ba302-R1_B23WHYVLT4_1.md.bam.metrics --REMOVE_DUPLICATES false --TMP_DIR . --VALIDATION_STRINGENCY LENIENT --CREATE_INDEX true --REFERENCE_SEQUENCE ref_genome.fa --MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP 50000 --MAX_FILE_HANDLES_FOR_READ_ENDS_MAP 8000 --SORTING_COLLECTION_SIZE_RATIO 0.25 --TAG_DUPLICATE_SET_MEMBERS false --REMOVE_SEQUENCING_DUPLICATES false --TAGGING_POLICY DontTag --CLEAR_DT true --DUPLEX_UMI false --FLOW_MODE false --FLOW_QUALITY_SUM_STRATEGY false --USE_END_IN_UNPAIRED_READS false --USE_UNPAIRED_CLIPPED_END false --UNPAIRED_END_UNCERTAINTY 0 --FLOW_SKIP_FIRST_N_FLOWS 0 --FLOW_Q_IS_KNOWN_END false --FLOW_EFFECTIVE_QUALITY_THRESHOLD 15 --ADD_PG_TAG_TO_READS true --ASSUME_SORTED false --DUPLICATE_SCORING_STRATEGY SUM_OF_BASE_QUALITIES --PROGRAM_RECORD_ID MarkDuplicates --PROGRAM_GROUP_NAME MarkDuplicates --READ_NAME_REGEX <optimized capture of last three ':' separated fields as numeric values> --OPTICAL_DUPLICATE_PIXEL_DISTANCE 100 --MAX_OPTICAL_DUPLICATE_SET_SIZE 300000 --VERBOSITY INFO --QUIET false --COMPRESSION_LEVEL 2 --MAX_RECORDS_IN_RAM 500000 --CREATE_MD5_FILE false --help false --version false --showHidden false --USE_JDK_DEFLATER false --USE_JDK_INFLATER false
[Mon Jun 08 08:38:08 GMT 2026] Executing as ?@nf-67e00c42f8a68df19dbf51d6f8de308b-257c8-x6zxx on Linux 6.12.88 amd64; OpenJDK 64-Bit Server VM 17.0.3-internal+0-adhoc..src; Deflater: Intel; Inflater: Intel; Provider GCS is available; Picard version: Version:4.4.0.0
INFO	2026-06-08 08:38:08	MarkDuplicates	Start of doWork freeMemory: 105826080; totalMemory: 134217728; maxMemory: 63585648640
INFO	2026-06-08 08:38:08	MarkDuplicates	Reading input file and constructing read end information.
INFO	2026-06-08 08:38:08	MarkDuplicates	Will retain up to 230382784 data points before spilling to disk.
INFO	2026-06-08 08:38:12	MarkDuplicates	Read     1,000,000 records.  Elapsed time: 00:00:02s.  Time for last 1,000,000:    2s.  Last read position: chr1:1,339,398
INFO	2026-06-08 08:38:12	MarkDuplicates	Tracking 3750 as yet unmatched pairs. 621 records in RAM.
INFO	2026-06-08 08:38:14	MarkDuplicates	Read     2,000,000 records.  Elapsed time: 00:00:04s.  Time for last 1,000,000:    2s.  Last read position: chr1:2,306,582
INFO	2026-06-08 08:38:14	MarkDuplicates	Tracking 6684 as yet unmatched pairs. 348 records in RAM.
INFO	2026-06-08 08:38:16	MarkDuplicates	Read     3,000,000 records.  Elapsed time: 00:00:06s.  Time for last 1,000,000:    2s.  Last read position: chr1:8,465,925
INFO	2026-06-08 08:38:16	MarkDuplicates	Tracking 9582 as yet unmatched pairs. 238 records in RAM.
INFO	2026-06-08 08:38:18	MarkDuplicates	Read     4,000,000 records.  Elapsed time: 00:00:08s.  Time for last 1,000,000:    1s.  Last read position: chr1:11,150,175
INFO	2026-06-08 08:38:18	MarkDuplicates	Tracking 12163 as yet unmatched pairs. 148 records in RAM.
INFO	2026-06-08 08:38:19	MarkDuplicates	Read     5,000,000 records.  Elapsed time: 00:00:09s.  Time for last 1,000,000:    1s.  Last read position: chr1:15,930,404
INFO	2026-06-08 08:38:19	MarkDuplicates	Tracking 15386 as yet unmatched pairs. 632 records in RAM.
INFO	2026-06-08 08:38:22	MarkDuplicates	Read     6,000,000 records.  Elapsed time: 00:00:12s.  Time for last 1,000,000:    2s.  Last read position: chr1:19,127,656
INFO	2026-06-08 08:38:22	MarkDuplicates	Tracking 17425 as yet unmatched pairs. 182 records in RAM.
INFO	2026-06-08 08:38:23	MarkDuplicates	Read     7,000,000 records.  Elapsed time: 00:00:13s.  Time for last 1,000,000:    1s.  Last read position: chr1:21,689,974
INFO	2026-06-08 08:38:23	MarkDuplicates	Tracking 20217 as yet unmatched pairs. 326 records in RAM.
INFO	2026-06-08 08:38:25	MarkDuplicates	Read     8,000,000 records.  Elapsed time: 00:00:15s.  Time for last 1,000,000:    1s.  Last read position: chr1:22,120,390
INFO	2026-06-08 08:38:25	MarkDuplicates	Tracking 23043 as yet unmatched pairs. 78 records in RAM.
INFO	2026-06-08 08:38:27	MarkDuplicates	Read     9,000,000 records.  Elapsed time: 00:00:17s.  Time for last 1,000,000:    1s.  Last read position: chr1:24,651,439
INFO	2026-06-08 08:38:27	MarkDuplicates	Tracking 26205 as yet unmatched pairs. 610 records in RAM.
INFO	2026-06-08 08:38:28	MarkDuplicates	Read    10,000,000 records.  Elapsed time: 00:00:18s.  Time for last 1,000,000:    1s.  Last read position: chr1:27,364,266
INFO	2026-06-08 08:38:28	MarkDuplicates	Tracking 28578 as yet unmatched pairs. 372 records in RAM.
INFO	2026-06-08 08:38:30	MarkDuplicates	Read    11,000,000 records.  Elapsed time: 00:00:20s.  Time for last 1,000,000:    1s.  Last read position: chr1:31,423,712
INFO	2026-06-08 08:38:30	MarkDuplicates	Tracking 32108 as yet unmatched pairs. 1179 records in RAM.
INFO	2026-06-08 08:38:33	MarkDuplicates	Read    12,000,000 records.  Elapsed time: 00:00:23s.  Time for last 1,000,000:    2s.  Last read position: chr1:32,946,544
INFO	2026-06-08 08:38:33	MarkDuplicates	Tracking 34028 as yet unmatched pairs. 260 records in RAM.
INFO	2026-06-08 08:38:34	MarkDuplicates	Read    13,000,000 records.  Elapsed time: 00:00:24s.  Time for last 1,000,000:    1s.  Last read position: chr1:36,322,371
INFO	2026-06-08 08:38:34	MarkDuplicates	Tracking 37762 as yet unmatched pairs. 1188 records in RAM.
INFO	2026-06-08 08:38:36	MarkDuplicates	Read    14,000,000 records.  Elapsed time: 00:00:26s.  Time for last 1,000,000:    1s.  Last read position: chr1:39,334,567
INFO	2026-06-08 08:38:36	MarkDuplicates	Tracking 41476 as yet unmatched pairs. 2386 records in RAM.
INFO	2026-06-08 08:38:37	MarkDuplicates	Read    15,000,000 records.  Elapsed time: 00:00:27s.  Time for last 1,000,000:    1s.  Last read position: chr1:39,485,703
INFO	2026-06-08 08:38:37	MarkDuplicates	Tracking 41782 as yet unmatched pairs. 189 records in RAM.
INFO	2026-06-08 08:38:39	MarkDuplicates	Read    16,000,000 records.  Elapsed time: 00:00:29s.  Time for last 1,000,000:    1s.  Last read position: chr1:40,304,337
INFO	2026-06-08 08:38:39	MarkDuplicates	Tracking 44454 as yet unmatched pairs. 310 records in RAM.
INFO	2026-06-08 08:38:41	MarkDuplicates	Read    17,000,000 records.  Elapsed time: 00:00:31s.  Time for last 1,000,000:    2s.  Last read position: chr1:42,927,205
INFO	2026-06-08 08:38:41	MarkDuplicates	Tracking 47505 as yet unmatched pairs. 674 records in RAM.
INFO	2026-06-08 08:38:43	MarkDuplicates	Read    18,000,000 records.  Elapsed time: 00:00:33s.  Time for last 1,000,000:    2s.  Last read position: chr1:43,619,551
INFO	2026-06-08 08:38:43	MarkDuplicates	Tracking 50911 as yet unmatched pairs. 1059 records in RAM.
INFO	2026-06-08 08:38:45	MarkDuplicates	Read    19,000,000 records.  Elapsed time: 00:00:35s.  Time for last 1,000,000:    2s.  Last read position: chr1:45,013,166
INFO	2026-06-08 08:38:45	MarkDuplicates	Tracking 53262 as yet unmatched pairs. 645 records in RAM.
INFO	2026-06-08 08:38:47	MarkDuplicates	Read    20,000,000 records.  Elapsed time: 00:00:37s.  Time for last 1,000,000:    1s.  Last read position: chr1:46,716,317
INFO	2026-06-08 08:38:47	MarkDuplicates	Tracking 56166 as yet unmatched pairs. 974 records in RAM.
INFO	2026-06-08 08:38:49	MarkDuplicates	Read    21,000,000 records.  Elapsed time: 00:00:38s.  Time for last 1,000,000:    1s.  Last read position: chr1:52,534,220
INFO	2026-06-08 08:38:49	MarkDuplicates	Tracking 57905 as yet unmatched pairs. 71 records in RAM.
INFO	2026-06-08 08:38:51	MarkDuplicates	Read    22,000,000 records.  Elapsed time: 00:00:41s.  Time for last 1,000,000:    2s.  Last read position: chr1:58,689,078
INFO	2026-06-08 08:38:51	MarkDuplicates	Tracking 61013 as yet unmatched pairs. 366 records in RAM.
INFO	2026-06-08 08:38:52	MarkDuplicates	Read    23,000,000 records.  Elapsed time: 00:00:42s.  Time for last 1,000,000:    1s.  Last read position: chr1:64,847,655
INFO	2026-06-08 08:38:52	MarkDuplicates	Tracking 63987 as yet unmatched pairs. 803 records in RAM.
INFO	2026-06-08 08:38:54	MarkDuplicates	Read    24,000,000 records.  Elapsed time: 00:00:44s.  Time for last 1,000,000:    2s.  Last read position: chr1:78,660,565
INFO	2026-06-08 08:38:54	MarkDuplicates	Tracking 66104 as yet unmatched pairs. 451 records in RAM.
INFO	2026-06-08 08:38:56	MarkDuplicates	Read    25,000,000 records.  Elapsed time: 00:00:46s.  Time for last 1,000,000:    1s.  Last read position: chr1:93,258,769
INFO	2026-06-08 08:38:56	MarkDuplicates	Tracking 68306 as yet unmatched pairs. 169 records in RAM.
INFO	2026-06-08 08:38:58	MarkDuplicates	Read    26,000,000 records.  Elapsed time: 00:00:48s.  Time for last 1,000,000:    1s.  Last read position: chr1:102,881,731
INFO	2026-06-08 08:38:58	MarkDuplicates	Tracking 72023 as yet unmatched pairs. 1648 records in RAM.
INFO	2026-06-08 08:39:00	MarkDuplicates	Read    27,000,000 records.  Elapsed time: 00:00:50s.  Time for last 1,000,000:    1s.  Last read position: chr1:109,271,213
INFO	2026-06-08 08:39:00	MarkDuplicates	Tracking 73927 as yet unmatched pairs. 829 records in RAM.
INFO	2026-06-08 08:39:02	MarkDuplicates	Read    28,000,000 records.  Elapsed time: 00:00:51s.  Time for last 1,000,000:    1s.  Last read position: chr1:111,982,262
INFO	2026-06-08 08:39:02	MarkDuplicates	Tracking 75776 as yet unmatched pairs. 114 records in RAM.
INFO	2026-06-08 08:39:04	MarkDuplicates	Read    29,000,000 records.  Elapsed time: 00:00:54s.  Time for last 1,000,000:    2s.  Last read position: chr1:113,683,794
INFO	2026-06-08 08:39:04	MarkDuplicates	Tracking 80205 as yet unmatched pairs. 1993 records in RAM.
INFO	2026-06-08 08:39:05	MarkDuplicates	Read    30,000,000 records.  Elapsed time: 00:00:55s.  Time for last 1,000,000:    1s.  Last read position: chr1:116,616,360
INFO	2026-06-08 08:39:05	MarkDuplicates	Tracking 81155 as yet unmatched pairs. 392 records in RAM.
INFO	2026-06-08 08:39:07	MarkDuplicates	Read    31,000,000 records.  Elapsed time: 00:00:57s.  Time for last 1,000,000:    1s.  Last read position: chr1:119,955,081
INFO	2026-06-08 08:39:07	MarkDuplicates	Tracking 85626 as yet unmatched pairs. 2284 records in RAM.
INFO	2026-06-08 08:39:09	MarkDuplicates	Read    32,000,000 records.  Elapsed time: 00:00:59s.  Time for last 1,000,000:    1s.  Last read position: chr1:144,995,165
INFO	2026-06-08 08:39:09	MarkDuplicates	Tracking 85777 as yet unmatched pairs. 696 records in RAM.
INFO	2026-06-08 08:39:10	MarkDuplicates	Read    33,000,000 records.  Elapsed time: 00:01:00s.  Time for last 1,000,000:    1s.  Last read position: chr1:146,975,701
INFO	2026-06-08 08:39:10	MarkDuplicates	Tracking 86809 as yet unmatched pairs. 495 records in RAM.
INFO	2026-06-08 08:39:12	MarkDuplicates	Read    34,000,000 records.  Elapsed time: 00:01:02s.  Time for last 1,000,000:    1s.  Last read position: chr1:149,016,445
INFO	2026-06-08 08:39:12	MarkDuplicates	Tracking 87608 as yet unmatched pairs. 157 records in RAM.
INFO	2026-06-08 08:39:13	MarkDuplicates	Read    35,000,000 records.  Elapsed time: 00:01:03s.  Time for last 1,000,000:    1s.  Last read position: chr1:149,926,907
INFO	2026-06-08 08:39:13	MarkDuplicates	Tracking 89656 as yet unmatched pairs. 754 records in RAM.
INFO	2026-06-08 08:39:15	MarkDuplicates	Read    36,000,000 records.  Elapsed time: 00:01:05s.  Time for last 1,000,000:    2s.  Last read position: chr1:150,964,297
INFO	2026-06-08 08:39:15	MarkDuplicates	Tracking 91890 as yet unmatched pairs. 322 records in RAM.
INFO	2026-06-08 08:39:17	MarkDuplicates	Read    37,000,000 records.  Elapsed time: 00:01:07s.  Time for last 1,000,000:    1s.  Last read position: chr1:152,215,537
INFO	2026-06-08 08:39:17	MarkDuplicates	Tracking 94518 as yet unmatched pairs. 383 records in RAM.
INFO	2026-06-08 08:39:18	MarkDuplicates	Read    38,000,000 records.  Elapsed time: 00:01:08s.  Time for last 1,000,000:    1s.  Last read position: chr1:154,157,587
INFO	2026-06-08 08:39:18	MarkDuplicates	Tracking 102899 as yet unmatched pairs. 6055 records in RAM.
INFO	2026-06-08 08:39:20	MarkDuplicates	Read    39,000,000 records.  Elapsed time: 00:01:10s.  Time for last 1,000,000:    1s.  Last read position: chr1:154,261,612
INFO	2026-06-08 08:39:20	MarkDuplicates	Tracking 100468 as yet unmatched pairs. 1353 records in RAM.
INFO	2026-06-08 08:39:22	MarkDuplicates	Read    40,000,000 records.  Elapsed time: 00:01:12s.  Time for last 1,000,000:    2s.  Last read position: chr1:155,062,265
INFO	2026-06-08 08:39:22	MarkDuplicates	Tracking 102454 as yet unmatched pairs. 678 records in RAM.
INFO	2026-06-08 08:39:24	MarkDuplicates	Read    41,000,000 records.  Elapsed time: 00:01:14s.  Time for last 1,000,000:    1s.  Last read position: chr1:155,200,589
INFO	2026-06-08 08:39:24	MarkDuplicates	Tracking 104180 as yet unmatched pairs. 361 records in RAM.
INFO	2026-06-08 08:39:26	MarkDuplicates	Read    42,000,000 records.  Elapsed time: 00:01:16s.  Time for last 1,000,000:    1s.  Last read position: chr1:155,753,263
INFO	2026-06-08 08:39:26	MarkDuplicates	Tracking 106513 as yet unmatched pairs. 337 records in RAM.
INFO	2026-06-08 08:39:28	MarkDuplicates	Read    43,000,000 records.  Elapsed time: 00:01:18s.  Time for last 1,000,000:    1s.  Last read position: chr1:156,139,780
INFO	2026-06-08 08:39:28	MarkDuplicates	Tracking 110020 as yet unmatched pairs. 630 records in RAM.
INFO	2026-06-08 08:39:30	MarkDuplicates	Read    44,000,000 records.  Elapsed time: 00:01:20s.  Time for last 1,000,000:    2s.  Last read position: chr1:158,076,225
INFO	2026-06-08 08:39:30	MarkDuplicates	Tracking 112442 as yet unmatched pairs. 330 records in RAM.
INFO	2026-06-08 08:39:32	MarkDuplicates	Read    45,000,000 records.  Elapsed time: 00:01:22s.  Time for last 1,000,000:    1s.  Last read position: chr1:161,158,135
INFO	2026-06-08 08:39:32	MarkDuplicates	Tracking 115369 as yet unmatched pairs. 645 records in RAM.
INFO	2026-06-08 08:39:33	MarkDuplicates	Read    46,000,000 records.  Elapsed time: 00:01:23s.  Time for last 1,000,000:    1s.  Last read position: chr1:162,587,478
INFO	2026-06-08 08:39:33	MarkDuplicates	Tracking 117499 as yet unmatched pairs. 475 records in RAM.
INFO	2026-06-08 08:39:35	MarkDuplicates	Read    47,000,000 records.  Elapsed time: 00:01:25s.  Time for last 1,000,000:    2s.  Last read position: chr1:171,540,169
INFO	2026-06-08 08:39:35	MarkDuplicates	Tracking 119919 as yet unmatched pairs. 259 records in RAM.
INFO	2026-06-08 08:39:37	MarkDuplicates	Read    48,000,000 records.  Elapsed time: 00:01:27s.  Time for last 1,000,000:    1s.  Last read position: chr1:179,095,124
INFO	2026-06-08 08:39:37	MarkDuplicates	Tracking 122364 as yet unmatched pairs. 269 records in RAM.
INFO	2026-06-08 08:39:38	MarkDuplicates	Read    49,000,000 records.  Elapsed time: 00:01:28s.  Time for last 1,000,000:    1s.  Last read position: chr1:183,529,397
INFO	2026-06-08 08:39:38	MarkDuplicates	Tracking 124921 as yet unmatched pairs. 267 records in RAM.
INFO	2026-06-08 08:39:40	MarkDuplicates	Read    50,000,000 records.  Elapsed time: 00:01:30s.  Time for last 1,000,000:    1s.  Last read position: chr1:186,341,084
INFO	2026-06-08 08:39:40	MarkDuplicates	Tracking 128150 as yet unmatched pairs. 1236 records in RAM.
INFO	2026-06-08 08:39:42	MarkDuplicates	Read    51,000,000 records.  Elapsed time: 00:01:31s.  Time for last 1,000,000:    1s.  Last read position: chr1:200,407,628
INFO	2026-06-08 08:39:42	MarkDuplicates	Tracking 129643 as yet unmatched pairs. 388 records in RAM.
INFO	2026-06-08 08:39:43	MarkDuplicates	Read    52,000,000 records.  Elapsed time: 00:01:33s.  Time for last 1,000,000:    1s.  Last read position: chr1:203,007,837
INFO	2026-06-08 08:39:43	MarkDuplicates	Tracking 132307 as yet unmatched pairs. 461 records in RAM.
INFO	2026-06-08 08:39:45	MarkDuplicates	Read    53,000,000 records.  Elapsed time: 00:01:35s.  Time for last 1,000,000:    1s.  Last read position: chr1:204,954,343
INFO	2026-06-08 08:39:45	MarkDuplicates	Tracking 134442 as yet unmatched pairs. 55 records in RAM.
INFO	2026-06-08 08:39:46	MarkDuplicates	Read    54,000,000 records.  Elapsed time: 00:01:36s.  Time for last 1,000,000:    1s.  Last read position: chr1:209,839,089
INFO	2026-06-08 08:39:46	MarkDuplicates	Tracking 137111 as yet unmatched pairs. 182 records in RAM.
INFO	2026-06-08 08:39:49	MarkDuplicates	Read    55,000,000 records.  Elapsed time: 00:01:39s.  Time for last 1,000,000:    2s.  Last read position: chr1:220,102,140
INFO	2026-06-08 08:39:49	MarkDuplicates	Tracking 140490 as yet unmatched pairs. 1180 records in RAM.
INFO	2026-06-08 08:39:51	MarkDuplicates	Read    56,000,000 records.  Elapsed time: 00:01:41s.  Time for last 1,000,000:    2s.  Last read position: chr1:225,080,459
INFO	2026-06-08 08:39:51	MarkDuplicates	Tracking 142135 as yet unmatched pairs. 318 records in RAM.
INFO	2026-06-08 08:39:53	MarkDuplicates	Read    57,000,000 records.  Elapsed time: 00:01:43s.  Time for last 1,000,000:    2s.  Last read position: chr1:226,908,572
INFO	2026-06-08 08:39:53	MarkDuplicates	Tracking 144329 as yet unmatched pairs. 69 records in RAM.
INFO	2026-06-08 08:39:55	MarkDuplicates	Read    58,000,000 records.  Elapsed time: 00:01:45s.  Time for last 1,000,000:    1s.  Last read position: chr1:228,359,915
INFO	2026-06-08 08:39:55	MarkDuplicates	Tracking 147626 as yet unmatched pairs. 354 records in RAM.
INFO	2026-06-08 08:39:57	MarkDuplicates	Read    59,000,000 records.  Elapsed time: 00:01:47s.  Time for last 1,000,000:    1s.  Last read position: chr1:234,373,540
INFO	2026-06-08 08:39:57	MarkDuplicates	Tracking 150411 as yet unmatched pairs. 55 records in RAM.
INFO	2026-06-08 08:39:58	MarkDuplicates	Read    60,000,000 records.  Elapsed time: 00:01:48s.  Time for last 1,000,000:    1s.  Last read position: chr1:241,633,816
INFO	2026-06-08 08:39:58	MarkDuplicates	Tracking 153433 as yet unmatched pairs. 360 records in RAM.
INFO	2026-06-08 08:40:00	MarkDuplicates	Read    61,000,000 records.  Elapsed time: 00:01:49s.  Time for last 1,000,000:    1s.  Last read position: chr1:246,840,921
INFO	2026-06-08 08:40:00	MarkDuplicates	Tracking 156190 as yet unmatched pairs. 527 records in RAM.
INFO	2026-06-08 08:40:03	MarkDuplicates	Read    62,000,000 records.  Elapsed time: 00:01:53s.  Time for last 1,000,000:    3s.  Last read position: chr2:9,400,741
INFO	2026-06-08 08:40:03	MarkDuplicates	Tracking 158416 as yet unmatched pairs. 156296 records in RAM.
INFO	2026-06-08 08:40:04	MarkDuplicates	Read    63,000,000 records.  Elapsed time: 00:01:54s.  Time for last 1,000,000:    1s.  Last read position: chr2:16,561,416
INFO	2026-06-08 08:40:04	MarkDuplicates	Tracking 161048 as yet unmatched pairs. 158902 records in RAM.
INFO	2026-06-08 08:40:06	MarkDuplicates	Read    64,000,000 records.  Elapsed time: 00:01:56s.  Time for last 1,000,000:    1s.  Last read position: chr2:24,822,550
INFO	2026-06-08 08:40:06	MarkDuplicates	Tracking 163986 as yet unmatched pairs. 161797 records in RAM.
INFO	2026-06-08 08:40:08	MarkDuplicates	Read    65,000,000 records.  Elapsed time: 00:01:58s.  Time for last 1,000,000:    1s.  Last read position: chr2:27,440,914
INFO	2026-06-08 08:40:08	MarkDuplicates	Tracking 167094 as yet unmatched pairs. 164881 records in RAM.
INFO	2026-06-08 08:40:10	MarkDuplicates	Read    66,000,000 records.  Elapsed time: 00:02:00s.  Time for last 1,000,000:    1s.  Last read position: chr2:32,916,243
INFO	2026-06-08 08:40:10	MarkDuplicates	Tracking 170051 as yet unmatched pairs. 166578 records in RAM.
INFO	2026-06-08 08:40:11	MarkDuplicates	Read    67,000,000 records.  Elapsed time: 00:02:01s.  Time for last 1,000,000:    1s.  Last read position: chr2:32,916,264
INFO	2026-06-08 08:40:11	MarkDuplicates	Tracking 335300 as yet unmatched pairs. 162851 records in RAM.
INFO	2026-06-08 08:40:13	MarkDuplicates	Read    68,000,000 records.  Elapsed time: 00:02:03s.  Time for last 1,000,000:    2s.  Last read position: chr2:32,916,264
INFO	2026-06-08 08:40:13	MarkDuplicates	Tracking 1003291 as yet unmatched pairs. 151507 records in RAM.
INFO	2026-06-08 08:40:15	MarkDuplicates	Read    69,000,000 records.  Elapsed time: 00:02:05s.  Time for last 1,000,000:    1s.  Last read position: chr2:32,916,406
INFO	2026-06-08 08:40:15	MarkDuplicates	Tracking 1351240 as yet unmatched pairs. 145351 records in RAM.
INFO	2026-06-08 08:40:16	MarkDuplicates	Read    70,000,000 records.  Elapsed time: 00:02:06s.  Time for last 1,000,000:    1s.  Last read position: chr2:32,916,406
INFO	2026-06-08 08:40:16	MarkDuplicates	Tracking 1354911 as yet unmatched pairs. 145255 records in RAM.
INFO	2026-06-08 08:40:18	MarkDuplicates	Read    71,000,000 records.  Elapsed time: 00:02:08s.  Time for last 1,000,000:    1s.  Last read position: chr2:36,905,537
INFO	2026-06-08 08:40:18	MarkDuplicates	Tracking 1444746 as yet unmatched pairs. 142478 records in RAM.
INFO	2026-06-08 08:40:19	MarkDuplicates	Read    72,000,000 records.  Elapsed time: 00:02:09s.  Time for last 1,000,000:    1s.  Last read position: chr2:43,549,292
INFO	2026-06-08 08:40:19	MarkDuplicates	Tracking 1442888 as yet unmatched pairs. 140608 records in RAM.
INFO	2026-06-08 08:40:21	MarkDuplicates	Read    73,000,000 records.  Elapsed time: 00:02:11s.  Time for last 1,000,000:    1s.  Last read position: chr2:53,817,901
INFO	2026-06-08 08:40:21	MarkDuplicates	Tracking 1439593 as yet unmatched pairs. 137287 records in RAM.
INFO	2026-06-08 08:40:23	MarkDuplicates	Read    74,000,000 records.  Elapsed time: 00:02:13s.  Time for last 1,000,000:    1s.  Last read position: chr2:60,891,711
INFO	2026-06-08 08:40:23	MarkDuplicates	Tracking 1436500 as yet unmatched pairs. 134159 records in RAM.
INFO	2026-06-08 08:40:25	MarkDuplicates	Read    75,000,000 records.  Elapsed time: 00:02:15s.  Time for last 1,000,000:    1s.  Last read position: chr2:68,252,140
INFO	2026-06-08 08:40:25	MarkDuplicates	Tracking 1434008 as yet unmatched pairs. 131638 records in RAM.
INFO	2026-06-08 08:40:27	MarkDuplicates	Read    76,000,000 records.  Elapsed time: 00:02:17s.  Time for last 1,000,000:    2s.  Last read position: chr2:73,080,225
INFO	2026-06-08 08:40:27	MarkDuplicates	Tracking 1431697 as yet unmatched pairs. 129281 records in RAM.
INFO	2026-06-08 08:40:30	MarkDuplicates	Read    77,000,000 records.  Elapsed time: 00:02:19s.  Time for last 1,000,000:    2s.  Last read position: chr2:84,906,020
INFO	2026-06-08 08:40:30	MarkDuplicates	Tracking 1429994 as yet unmatched pairs. 127559 records in RAM.
INFO	2026-06-08 08:40:32	MarkDuplicates	Read    78,000,000 records.  Elapsed time: 00:02:22s.  Time for last 1,000,000:    2s.  Last read position: chr2:91,748,315
INFO	2026-06-08 08:40:32	MarkDuplicates	Tracking 1426797 as yet unmatched pairs. 124305 records in RAM.
INFO	2026-06-08 08:40:33	MarkDuplicates	Read    79,000,000 records.  Elapsed time: 00:02:23s.  Time for last 1,000,000:    1s.  Last read position: chr2:98,536,129
INFO	2026-06-08 08:40:33	MarkDuplicates	Tracking 1424838 as yet unmatched pairs. 122318 records in RAM.
INFO	2026-06-08 08:40:35	MarkDuplicates	Read    80,000,000 records.  Elapsed time: 00:02:25s.  Time for last 1,000,000:    1s.  Last read position: chr2:108,496,987
INFO	2026-06-08 08:40:35	MarkDuplicates	Tracking 1422701 as yet unmatched pairs. 120130 records in RAM.
INFO	2026-06-08 08:40:36	MarkDuplicates	Read    81,000,000 records.  Elapsed time: 00:02:26s.  Time for last 1,000,000:    1s.  Last read position: chr2:109,835,027
INFO	2026-06-08 08:40:36	MarkDuplicates	Tracking 1420824 as yet unmatched pairs. 118250 records in RAM.
INFO	2026-06-08 08:40:38	MarkDuplicates	Read    82,000,000 records.  Elapsed time: 00:02:27s.  Time for last 1,000,000:    1s.  Last read position: chr2:112,417,850
INFO	2026-06-08 08:40:38	MarkDuplicates	Tracking 1419349 as yet unmatched pairs. 116743 records in RAM.
INFO	2026-06-08 08:40:39	MarkDuplicates	Read    83,000,000 records.  Elapsed time: 00:02:29s.  Time for last 1,000,000:    1s.  Last read position: chr2:127,873,839
INFO	2026-06-08 08:40:39	MarkDuplicates	Tracking 1417100 as yet unmatched pairs. 114431 records in RAM.
INFO	2026-06-08 08:40:41	MarkDuplicates	Read    84,000,000 records.  Elapsed time: 00:02:31s.  Time for last 1,000,000:    1s.  Last read position: chr2:135,916,226
INFO	2026-06-08 08:40:41	MarkDuplicates	Tracking 1415024 as yet unmatched pairs. 112320 records in RAM.
INFO	2026-06-08 08:40:42	MarkDuplicates	Read    85,000,000 records.  Elapsed time: 00:02:32s.  Time for last 1,000,000:    1s.  Last read position: chr2:160,005,654
INFO	2026-06-08 08:40:42	MarkDuplicates	Tracking 1412348 as yet unmatched pairs. 109597 records in RAM.
INFO	2026-06-08 08:40:44	MarkDuplicates	Read    86,000,000 records.  Elapsed time: 00:02:34s.  Time for last 1,000,000:    2s.  Last read position: chr2:171,726,227
INFO	2026-06-08 08:40:44	MarkDuplicates	Tracking 1410193 as yet unmatched pairs. 107383 records in RAM.
INFO	2026-06-08 08:40:46	MarkDuplicates	Read    87,000,000 records.  Elapsed time: 00:02:36s.  Time for last 1,000,000:    1s.  Last read position: chr2:178,541,474
INFO	2026-06-08 08:40:46	MarkDuplicates	Tracking 1407512 as yet unmatched pairs. 104665 records in RAM.
INFO	2026-06-08 08:40:48	MarkDuplicates	Read    88,000,000 records.  Elapsed time: 00:02:38s.  Time for last 1,000,000:    1s.  Last read position: chr2:188,988,607
INFO	2026-06-08 08:40:48	MarkDuplicates	Tracking 1422394 as yet unmatched pairs. 119507 records in RAM.
INFO	2026-06-08 08:40:50	MarkDuplicates	Read    89,000,000 records.  Elapsed time: 00:02:40s.  Time for last 1,000,000:    1s.  Last read position: chr2:188,999,550
INFO	2026-06-08 08:40:50	MarkDuplicates	Tracking 1409053 as yet unmatched pairs. 106139 records in RAM.
INFO	2026-06-08 08:40:53	MarkDuplicates	Read    90,000,000 records.  Elapsed time: 00:02:43s.  Time for last 1,000,000:    2s.  Last read position: chr2:189,010,791
INFO	2026-06-08 08:40:53	MarkDuplicates	Tracking 1404511 as yet unmatched pairs. 101555 records in RAM.
INFO	2026-06-08 08:40:55	MarkDuplicates	Read    91,000,000 records.  Elapsed time: 00:02:45s.  Time for last 1,000,000:    2s.  Last read position: chr2:189,864,004
INFO	2026-06-08 08:40:55	MarkDuplicates	Tracking 1396065 as yet unmatched pairs. 93081 records in RAM.
INFO	2026-06-08 08:40:57	MarkDuplicates	Read    92,000,000 records.  Elapsed time: 00:02:47s.  Time for last 1,000,000:    1s.  Last read position: chr2:201,137,506
INFO	2026-06-08 08:40:57	MarkDuplicates	Tracking 1394012 as yet unmatched pairs. 90976 records in RAM.
INFO	2026-06-08 08:40:58	MarkDuplicates	Read    93,000,000 records.  Elapsed time: 00:02:48s.  Time for last 1,000,000:    1s.  Last read position: chr2:211,712,098
INFO	2026-06-08 08:40:58	MarkDuplicates	Tracking 1391844 as yet unmatched pairs. 88771 records in RAM.
INFO	2026-06-08 08:41:00	MarkDuplicates	Read    94,000,000 records.  Elapsed time: 00:02:50s.  Time for last 1,000,000:    1s.  Last read position: chr2:215,361,613
INFO	2026-06-08 08:41:00	MarkDuplicates	Tracking 1461839 as yet unmatched pairs. 158749 records in RAM.
INFO	2026-06-08 08:41:02	MarkDuplicates	Read    95,000,000 records.  Elapsed time: 00:02:52s.  Time for last 1,000,000:    2s.  Last read position: chr2:215,364,936
INFO	2026-06-08 08:41:02	MarkDuplicates	Tracking 1434429 as yet unmatched pairs. 131336 records in RAM.
INFO	2026-06-08 08:41:04	MarkDuplicates	Read    96,000,000 records.  Elapsed time: 00:02:54s.  Time for last 1,000,000:    1s.  Last read position: chr2:215,368,013
INFO	2026-06-08 08:41:04	MarkDuplicates	Tracking 1458678 as yet unmatched pairs. 155569 records in RAM.
INFO	2026-06-08 08:41:06	MarkDuplicates	Read    97,000,000 records.  Elapsed time: 00:02:56s.  Time for last 1,000,000:    1s.  Last read position: chr2:215,371,979
INFO	2026-06-08 08:41:06	MarkDuplicates	Tracking 1439016 as yet unmatched pairs. 135886 records in RAM.
INFO	2026-06-08 08:41:08	MarkDuplicates	Read    98,000,000 records.  Elapsed time: 00:02:57s.  Time for last 1,000,000:    1s.  Last read position: chr2:215,372,152
INFO	2026-06-08 08:41:08	MarkDuplicates	Tracking 1479896 as yet unmatched pairs. 176761 records in RAM.
INFO	2026-06-08 08:41:09	MarkDuplicates	Read    99,000,000 records.  Elapsed time: 00:02:59s.  Time for last 1,000,000:    1s.  Last read position: chr2:215,372,346
INFO	2026-06-08 08:41:09	MarkDuplicates	Tracking 1418001 as yet unmatched pairs. 114850 records in RAM.
INFO	2026-06-08 08:41:11	MarkDuplicates	Read   100,000,000 records.  Elapsed time: 00:03:01s.  Time for last 1,000,000:    1s.  Last read position: chr2:215,375,270
INFO	2026-06-08 08:41:11	MarkDuplicates	Tracking 1433087 as yet unmatched pairs. 129925 records in RAM.
INFO	2026-06-08 08:41:13	MarkDuplicates	Read   101,000,000 records.  Elapsed time: 00:03:03s.  Time for last 1,000,000:    1s.  Last read position: chr2:215,375,653
INFO	2026-06-08 08:41:13	MarkDuplicates	Tracking 1468954 as yet unmatched pairs. 165777 records in RAM.
INFO	2026-06-08 08:41:14	MarkDuplicates	Read   102,000,000 records.  Elapsed time: 00:03:04s.  Time for last 1,000,000:    1s.  Last read position: chr2:215,376,616
INFO	2026-06-08 08:41:14	MarkDuplicates	Tracking 1436970 as yet unmatched pairs. 133791 records in RAM.
INFO	2026-06-08 08:41:16	MarkDuplicates	Read   103,000,000 records.  Elapsed time: 00:03:06s.  Time for last 1,000,000:    1s.  Last read position: chr2:215,379,190
INFO	2026-06-08 08:41:16	MarkDuplicates	Tracking 1413764 as yet unmatched pairs. 110581 records in RAM.
INFO	2026-06-08 08:41:18	MarkDuplicates	Read   104,000,000 records.  Elapsed time: 00:03:08s.  Time for last 1,000,000:    1s.  Last read position: chr2:215,380,925
INFO	2026-06-08 08:41:18	MarkDuplicates	Tracking 1447404 as yet unmatched pairs. 144194 records in RAM.
INFO	2026-06-08 08:41:20	MarkDuplicates	Read   105,000,000 records.  Elapsed time: 00:03:10s.  Time for last 1,000,000:    1s.  Last read position: chr2:215,383,378
INFO	2026-06-08 08:41:20	MarkDuplicates	Tracking 1414439 as yet unmatched pairs. 111206 records in RAM.
INFO	2026-06-08 08:41:22	MarkDuplicates	Read   106,000,000 records.  Elapsed time: 00:03:12s.  Time for last 1,000,000:    2s.  Last read position: chr2:215,384,866
INFO	2026-06-08 08:41:22	MarkDuplicates	Tracking 1399580 as yet unmatched pairs. 96324 records in RAM.
INFO	2026-06-08 08:41:23	MarkDuplicates	Read   107,000,000 records.  Elapsed time: 00:03:13s.  Time for last 1,000,000:    1s.  Last read position: chr2:215,386,869
INFO	2026-06-08 08:41:23	MarkDuplicates	Tracking 1459571 as yet unmatched pairs. 156298 records in RAM.
INFO	2026-06-08 08:41:25	MarkDuplicates	Read   108,000,000 records.  Elapsed time: 00:03:15s.  Time for last 1,000,000:    1s.  Last read position: chr2:215,391,731
INFO	2026-06-08 08:41:25	MarkDuplicates	Tracking 1382564 as yet unmatched pairs. 79282 records in RAM.
INFO	2026-06-08 08:41:27	MarkDuplicates	Read   109,000,000 records.  Elapsed time: 00:03:17s.  Time for last 1,000,000:    1s.  Last read position: chr2:215,394,681
INFO	2026-06-08 08:41:27	MarkDuplicates	Tracking 1412960 as yet unmatched pairs. 109656 records in RAM.
INFO	2026-06-08 08:41:29	MarkDuplicates	Read   110,000,000 records.  Elapsed time: 00:03:19s.  Time for last 1,000,000:    1s.  Last read position: chr2:215,397,744
INFO	2026-06-08 08:41:29	MarkDuplicates	Tracking 1405773 as yet unmatched pairs. 102454 records in RAM.
INFO	2026-06-08 08:41:31	MarkDuplicates	Read   111,000,000 records.  Elapsed time: 00:03:21s.  Time for last 1,000,000:    1s.  Last read position: chr2:215,404,455
INFO	2026-06-08 08:41:31	MarkDuplicates	Tracking 1390726 as yet unmatched pairs. 87384 records in RAM.
INFO	2026-06-08 08:41:33	MarkDuplicates	Read   112,000,000 records.  Elapsed time: 00:03:23s.  Time for last 1,000,000:    2s.  Last read position: chr2:215,406,328
INFO	2026-06-08 08:41:33	MarkDuplicates	Tracking 1389658 as yet unmatched pairs. 86304 records in RAM.
INFO	2026-06-08 08:41:35	MarkDuplicates	Read   113,000,000 records.  Elapsed time: 00:03:25s.  Time for last 1,000,000:    2s.  Last read position: chr2:215,407,248
INFO	2026-06-08 08:41:35	MarkDuplicates	Tracking 1399393 as yet unmatched pairs. 96012 records in RAM.
INFO	2026-06-08 08:41:37	MarkDuplicates	Read   114,000,000 records.  Elapsed time: 00:03:27s.  Time for last 1,000,000:    2s.  Last read position: chr2:215,408,315
INFO	2026-06-08 08:41:37	MarkDuplicates	Tracking 1404333 as yet unmatched pairs. 100948 records in RAM.
INFO	2026-06-08 08:41:39	MarkDuplicates	Read   115,000,000 records.  Elapsed time: 00:03:29s.  Time for last 1,000,000:    1s.  Last read position: chr2:215,409,936
INFO	2026-06-08 08:41:39	MarkDuplicates	Tracking 1372566 as yet unmatched pairs. 69161 records in RAM.
INFO	2026-06-08 08:41:41	MarkDuplicates	Read   116,000,000 records.  Elapsed time: 00:03:31s.  Time for last 1,000,000:    1s.  Last read position: chr2:215,414,837
INFO	2026-06-08 08:41:41	MarkDuplicates	Tracking 1368707 as yet unmatched pairs. 65284 records in RAM.
INFO	2026-06-08 08:41:43	MarkDuplicates	Read   117,000,000 records.  Elapsed time: 00:03:33s.  Time for last 1,000,000:    1s.  Last read position: chr2:215,420,695
INFO	2026-06-08 08:41:43	MarkDuplicates	Tracking 1343906 as yet unmatched pairs. 40478 records in RAM.
INFO	2026-06-08 08:41:44	MarkDuplicates	Read   118,000,000 records.  Elapsed time: 00:03:34s.  Time for last 1,000,000:    1s.  Last read position: chr2:215,423,459
INFO	2026-06-08 08:41:44	MarkDuplicates	Tracking 1355157 as yet unmatched pairs. 51724 records in RAM.
INFO	2026-06-08 08:41:46	MarkDuplicates	Read   119,000,000 records.  Elapsed time: 00:03:36s.  Time for last 1,000,000:    1s.  Last read position: chr2:215,425,144
INFO	2026-06-08 08:41:46	MarkDuplicates	Tracking 1357706 as yet unmatched pairs. 54251 records in RAM.
INFO	2026-06-08 08:41:48	MarkDuplicates	Read   120,000,000 records.  Elapsed time: 00:03:38s.  Time for last 1,000,000:    1s.  Last read position: chr2:215,428,319
INFO	2026-06-08 08:41:48	MarkDuplicates	Tracking 1376942 as yet unmatched pairs. 73463 records in RAM.
INFO	2026-06-08 08:41:49	MarkDuplicates	Read   121,000,000 records.  Elapsed time: 00:03:39s.  Time for last 1,000,000:    1s.  Last read position: chr2:215,431,948
INFO	2026-06-08 08:41:49	MarkDuplicates	Tracking 1374683 as yet unmatched pairs. 71202 records in RAM.
INFO	2026-06-08 08:41:51	MarkDuplicates	Read   122,000,000 records.  Elapsed time: 00:03:41s.  Time for last 1,000,000:    1s.  Last read position: chr2:215,435,711
INFO	2026-06-08 08:41:51	MarkDuplicates	Tracking 1340454 as yet unmatched pairs. 36945 records in RAM.
INFO	2026-06-08 08:41:53	MarkDuplicates	Read   123,000,000 records.  Elapsed time: 00:03:43s.  Time for last 1,000,000:    1s.  Last read position: chr2:218,277,945
INFO	2026-06-08 08:41:53	MarkDuplicates	Tracking 1319829 as yet unmatched pairs. 16281 records in RAM.
INFO	2026-06-08 08:41:55	MarkDuplicates	Read   124,000,000 records.  Elapsed time: 00:03:44s.  Time for last 1,000,000:    1s.  Last read position: chr2:226,797,745
INFO	2026-06-08 08:41:55	MarkDuplicates	Tracking 1315442 as yet unmatched pairs. 11858 records in RAM.
INFO	2026-06-08 08:41:57	MarkDuplicates	Read   125,000,000 records.  Elapsed time: 00:03:47s.  Time for last 1,000,000:    2s.  Last read position: chr2:232,662,934
INFO	2026-06-08 08:41:57	MarkDuplicates	Tracking 1313313 as yet unmatched pairs. 9696 records in RAM.
INFO	2026-06-08 08:41:59	MarkDuplicates	Read   126,000,000 records.  Elapsed time: 00:03:49s.  Time for last 1,000,000:    2s.  Last read position: chr2:237,352,548
INFO	2026-06-08 08:41:59	MarkDuplicates	Tracking 1313335 as yet unmatched pairs. 9660 records in RAM.
INFO	2026-06-08 08:42:01	MarkDuplicates	Read   127,000,000 records.  Elapsed time: 00:03:51s.  Time for last 1,000,000:    1s.  Last read position: chr2:237,381,210
INFO	2026-06-08 08:42:01	MarkDuplicates	Tracking 1310053 as yet unmatched pairs. 6338 records in RAM.
INFO	2026-06-08 08:42:03	MarkDuplicates	Read   128,000,000 records.  Elapsed time: 00:03:53s.  Time for last 1,000,000:    1s.  Last read position: chr2:241,249,882
INFO	2026-06-08 08:42:03	MarkDuplicates	Tracking 1306040 as yet unmatched pairs. 2287 records in RAM.
INFO	2026-06-08 08:42:05	MarkDuplicates	Read   129,000,000 records.  Elapsed time: 00:03:55s.  Time for last 1,000,000:    2s.  Last read position: chr3:9,473,460
INFO	2026-06-08 08:42:05	MarkDuplicates	Tracking 1302664 as yet unmatched pairs. 71303 records in RAM.
INFO	2026-06-08 08:42:07	MarkDuplicates	Read   130,000,000 records.  Elapsed time: 00:03:57s.  Time for last 1,000,000:    1s.  Last read position: chr3:12,618,560
INFO	2026-06-08 08:42:07	MarkDuplicates	Tracking 1302177 as yet unmatched pairs. 70789 records in RAM.
INFO	2026-06-08 08:42:08	MarkDuplicates	Read   131,000,000 records.  Elapsed time: 00:03:58s.  Time for last 1,000,000:    1s.  Last read position: chr3:15,738,593
INFO	2026-06-08 08:42:08	MarkDuplicates	Tracking 1297536 as yet unmatched pairs. 66107 records in RAM.
INFO	2026-06-08 08:42:10	MarkDuplicates	Read   132,000,000 records.  Elapsed time: 00:04:00s.  Time for last 1,000,000:    1s.  Last read position: chr3:33,402,836
INFO	2026-06-08 08:42:10	MarkDuplicates	Tracking 1295525 as yet unmatched pairs. 64050 records in RAM.
INFO	2026-06-08 08:42:12	MarkDuplicates	Read   133,000,000 records.  Elapsed time: 00:04:02s.  Time for last 1,000,000:    1s.  Last read position: chr3:39,407,740
INFO	2026-06-08 08:42:12	MarkDuplicates	Tracking 1295756 as yet unmatched pairs. 64253 records in RAM.
INFO	2026-06-08 08:42:13	MarkDuplicates	Read   134,000,000 records.  Elapsed time: 00:04:03s.  Time for last 1,000,000:    1s.  Last read position: chr3:43,081,004
INFO	2026-06-08 08:42:13	MarkDuplicates	Tracking 1290239 as yet unmatched pairs. 58701 records in RAM.
INFO	2026-06-08 08:42:15	MarkDuplicates	Read   135,000,000 records.  Elapsed time: 00:04:05s.  Time for last 1,000,000:    1s.  Last read position: chr3:47,407,714
INFO	2026-06-08 08:42:15	MarkDuplicates	Tracking 1287797 as yet unmatched pairs. 56220 records in RAM.
INFO	2026-06-08 08:42:17	MarkDuplicates	Read   136,000,000 records.  Elapsed time: 00:04:07s.  Time for last 1,000,000:    1s.  Last read position: chr3:48,421,301
INFO	2026-06-08 08:42:17	MarkDuplicates	Tracking 1285485 as yet unmatched pairs. 53878 records in RAM.
INFO	2026-06-08 08:42:18	MarkDuplicates	Read   137,000,000 records.  Elapsed time: 00:04:08s.  Time for last 1,000,000:    1s.  Last read position: chr3:49,026,298
INFO	2026-06-08 08:42:18	MarkDuplicates	Tracking 1282852 as yet unmatched pairs. 51218 records in RAM.
INFO	2026-06-08 08:42:21	MarkDuplicates	Read   138,000,000 records.  Elapsed time: 00:04:11s.  Time for last 1,000,000:    2s.  Last read position: chr3:49,368,532
INFO	2026-06-08 08:42:21	MarkDuplicates	Tracking 1282762 as yet unmatched pairs. 51098 records in RAM.
INFO	2026-06-08 08:42:23	MarkDuplicates	Read   139,000,000 records.  Elapsed time: 00:04:13s.  Time for last 1,000,000:    1s.  Last read position: chr3:50,326,101
INFO	2026-06-08 08:42:23	MarkDuplicates	Tracking 1277144 as yet unmatched pairs. 45457 records in RAM.
INFO	2026-06-08 08:42:24	MarkDuplicates	Read   140,000,000 records.  Elapsed time: 00:04:14s.  Time for last 1,000,000:    1s.  Last read position: chr3:52,488,122
INFO	2026-06-08 08:42:24	MarkDuplicates	Tracking 1274386 as yet unmatched pairs. 42683 records in RAM.
INFO	2026-06-08 08:42:27	MarkDuplicates	Read   141,000,000 records.  Elapsed time: 00:04:17s.  Time for last 1,000,000:    2s.  Last read position: chr3:53,723,620
INFO	2026-06-08 08:42:27	MarkDuplicates	Tracking 1271661 as yet unmatched pairs. 39918 records in RAM.
INFO	2026-06-08 08:42:29	MarkDuplicates	Read   142,000,000 records.  Elapsed time: 00:04:19s.  Time for last 1,000,000:    2s.  Last read position: chr3:58,124,447
INFO	2026-06-08 08:42:29	MarkDuplicates	Tracking 1270069 as yet unmatched pairs. 38318 records in RAM.
INFO	2026-06-08 08:42:31	MarkDuplicates	Read   143,000,000 records.  Elapsed time: 00:04:21s.  Time for last 1,000,000:    1s.  Last read position: chr3:69,048,338
INFO	2026-06-08 08:42:31	MarkDuplicates	Tracking 1266447 as yet unmatched pairs. 34624 records in RAM.
INFO	2026-06-08 08:42:33	MarkDuplicates	Read   144,000,000 records.  Elapsed time: 00:04:23s.  Time for last 1,000,000:    1s.  Last read position: chr3:99,850,014
INFO	2026-06-08 08:42:33	MarkDuplicates	Tracking 1265208 as yet unmatched pairs. 33320 records in RAM.
INFO	2026-06-08 08:42:34	MarkDuplicates	Read   145,000,000 records.  Elapsed time: 00:04:24s.  Time for last 1,000,000:    1s.  Last read position: chr3:112,550,218
INFO	2026-06-08 08:42:34	MarkDuplicates	Tracking 1261422 as yet unmatched pairs. 29497 records in RAM.
INFO	2026-06-08 08:42:36	MarkDuplicates	Read   146,000,000 records.  Elapsed time: 00:04:26s.  Time for last 1,000,000:    1s.  Last read position: chr3:121,696,309
INFO	2026-06-08 08:42:36	MarkDuplicates	Tracking 1259040 as yet unmatched pairs. 27085 records in RAM.
INFO	2026-06-08 08:42:38	MarkDuplicates	Read   147,000,000 records.  Elapsed time: 00:04:28s.  Time for last 1,000,000:    1s.  Last read position: chr3:125,233,573
INFO	2026-06-08 08:42:38	MarkDuplicates	Tracking 1256710 as yet unmatched pairs. 24722 records in RAM.
INFO	2026-06-08 08:42:39	MarkDuplicates	Read   148,000,000 records.  Elapsed time: 00:04:29s.  Time for last 1,000,000:    1s.  Last read position: chr3:129,265,742
INFO	2026-06-08 08:42:39	MarkDuplicates	Tracking 1253986 as yet unmatched pairs. 21957 records in RAM.
INFO	2026-06-08 08:42:41	MarkDuplicates	Read   149,000,000 records.  Elapsed time: 00:04:31s.  Time for last 1,000,000:    1s.  Last read position: chr3:133,623,175
INFO	2026-06-08 08:42:41	MarkDuplicates	Tracking 1251079 as yet unmatched pairs. 19030 records in RAM.
INFO	2026-06-08 08:42:43	MarkDuplicates	Read   150,000,000 records.  Elapsed time: 00:04:33s.  Time for last 1,000,000:    1s.  Last read position: chr3:142,689,805
INFO	2026-06-08 08:42:43	MarkDuplicates	Tracking 1248335 as yet unmatched pairs. 16249 records in RAM.
INFO	2026-06-08 08:42:44	MarkDuplicates	Read   151,000,000 records.  Elapsed time: 00:04:34s.  Time for last 1,000,000:    1s.  Last read position: chr3:155,167,001
INFO	2026-06-08 08:42:44	MarkDuplicates	Tracking 1245853 as yet unmatched pairs. 13732 records in RAM.
INFO	2026-06-08 08:42:46	MarkDuplicates	Read   152,000,000 records.  Elapsed time: 00:04:36s.  Time for last 1,000,000:    1s.  Last read position: chr3:170,361,025
INFO	2026-06-08 08:42:46	MarkDuplicates	Tracking 1244343 as yet unmatched pairs. 12165 records in RAM.
INFO	2026-06-08 08:42:48	MarkDuplicates	Read   153,000,000 records.  Elapsed time: 00:04:38s.  Time for last 1,000,000:    2s.  Last read position: chr3:183,729,012
INFO	2026-06-08 08:42:48	MarkDuplicates	Tracking 1241185 as yet unmatched pairs. 8958 records in RAM.
INFO	2026-06-08 08:42:50	MarkDuplicates	Read   154,000,000 records.  Elapsed time: 00:04:40s.  Time for last 1,000,000:    1s.  Last read position: chr3:184,572,744
INFO	2026-06-08 08:42:50	MarkDuplicates	Tracking 1238584 as yet unmatched pairs. 6339 records in RAM.
INFO	2026-06-08 08:42:51	MarkDuplicates	Read   155,000,000 records.  Elapsed time: 00:04:41s.  Time for last 1,000,000:    1s.  Last read position: chr3:188,609,525
INFO	2026-06-08 08:42:51	MarkDuplicates	Tracking 1237411 as yet unmatched pairs. 5148 records in RAM.
INFO	2026-06-08 08:42:53	MarkDuplicates	Read   156,000,000 records.  Elapsed time: 00:04:43s.  Time for last 1,000,000:    1s.  Last read position: chr3:196,257,803
INFO	2026-06-08 08:42:53	MarkDuplicates	Tracking 1233918 as yet unmatched pairs. 1610 records in RAM.
INFO	2026-06-08 08:42:55	MarkDuplicates	Read   157,000,000 records.  Elapsed time: 00:04:45s.  Time for last 1,000,000:    2s.  Last read position: chr4:1,170,419
INFO	2026-06-08 08:42:55	MarkDuplicates	Tracking 1231169 as yet unmatched pairs. 34793 records in RAM.
INFO	2026-06-08 08:42:57	MarkDuplicates	Read   158,000,000 records.  Elapsed time: 00:04:47s.  Time for last 1,000,000:    1s.  Last read position: chr4:3,105,384
INFO	2026-06-08 08:42:57	MarkDuplicates	Tracking 1228086 as yet unmatched pairs. 31664 records in RAM.
INFO	2026-06-08 08:42:58	MarkDuplicates	Read   159,000,000 records.  Elapsed time: 00:04:48s.  Time for last 1,000,000:    1s.  Last read position: chr4:9,249,103
INFO	2026-06-08 08:42:58	MarkDuplicates	Tracking 1225025 as yet unmatched pairs. 28570 records in RAM.
INFO	2026-06-08 08:43:00	MarkDuplicates	Read   160,000,000 records.  Elapsed time: 00:04:50s.  Time for last 1,000,000:    2s.  Last read position: chr4:26,430,716
INFO	2026-06-08 08:43:00	MarkDuplicates	Tracking 1223043 as yet unmatched pairs. 26547 records in RAM.
INFO	2026-06-08 08:43:02	MarkDuplicates	Read   161,000,000 records.  Elapsed time: 00:04:52s.  Time for last 1,000,000:    1s.  Last read position: chr4:41,938,630
INFO	2026-06-08 08:43:02	MarkDuplicates	Tracking 1220457 as yet unmatched pairs. 23908 records in RAM.
INFO	2026-06-08 08:43:04	MarkDuplicates	Read   162,000,000 records.  Elapsed time: 00:04:54s.  Time for last 1,000,000:    1s.  Last read position: chr4:56,976,698
INFO	2026-06-08 08:43:04	MarkDuplicates	Tracking 1217886 as yet unmatched pairs. 21306 records in RAM.
INFO	2026-06-08 08:43:06	MarkDuplicates	Read   163,000,000 records.  Elapsed time: 00:04:56s.  Time for last 1,000,000:    1s.  Last read position: chr4:76,741,096
INFO	2026-06-08 08:43:06	MarkDuplicates	Tracking 1215208 as yet unmatched pairs. 18597 records in RAM.
INFO	2026-06-08 08:43:08	MarkDuplicates	Read   164,000,000 records.  Elapsed time: 00:04:58s.  Time for last 1,000,000:    1s.  Last read position: chr4:84,826,819
INFO	2026-06-08 08:43:08	MarkDuplicates	Tracking 1212857 as yet unmatched pairs. 16215 records in RAM.
INFO	2026-06-08 08:43:09	MarkDuplicates	Read   165,000,000 records.  Elapsed time: 00:04:59s.  Time for last 1,000,000:    1s.  Last read position: chr4:87,982,623
INFO	2026-06-08 08:43:09	MarkDuplicates	Tracking 1226159 as yet unmatched pairs. 29497 records in RAM.
INFO	2026-06-08 08:43:11	MarkDuplicates	Read   166,000,000 records.  Elapsed time: 00:05:01s.  Time for last 1,000,000:    1s.  Last read position: chr4:105,552,905
INFO	2026-06-08 08:43:11	MarkDuplicates	Tracking 1208171 as yet unmatched pairs. 11450 records in RAM.
INFO	2026-06-08 08:43:13	MarkDuplicates	Read   167,000,000 records.  Elapsed time: 00:05:03s.  Time for last 1,000,000:    1s.  Last read position: chr4:122,230,083
INFO	2026-06-08 08:43:13	MarkDuplicates	Tracking 1205713 as yet unmatched pairs. 8953 records in RAM.
INFO	2026-06-08 08:43:14	MarkDuplicates	Read   168,000,000 records.  Elapsed time: 00:05:04s.  Time for last 1,000,000:    1s.  Last read position: chr4:145,104,393
INFO	2026-06-08 08:43:14	MarkDuplicates	Tracking 1203579 as yet unmatched pairs. 6756 records in RAM.
INFO	2026-06-08 08:43:16	MarkDuplicates	Read   169,000,000 records.  Elapsed time: 00:05:06s.  Time for last 1,000,000:    1s.  Last read position: chr4:153,788,536
INFO	2026-06-08 08:43:16	MarkDuplicates	Tracking 1205818 as yet unmatched pairs. 8973 records in RAM.
INFO	2026-06-08 08:43:17	MarkDuplicates	Read   170,000,000 records.  Elapsed time: 00:05:07s.  Time for last 1,000,000:    1s.  Last read position: chr4:183,322,077
INFO	2026-06-08 08:43:17	MarkDuplicates	Tracking 1198259 as yet unmatched pairs. 1376 records in RAM.
INFO	2026-06-08 08:43:20	MarkDuplicates	Read   171,000,000 records.  Elapsed time: 00:05:09s.  Time for last 1,000,000:    2s.  Last read position: chr5:1,085,246
INFO	2026-06-08 08:43:20	MarkDuplicates	Tracking 1196463 as yet unmatched pairs. 62926 records in RAM.
INFO	2026-06-08 08:43:21	MarkDuplicates	Read   172,000,000 records.  Elapsed time: 00:05:11s.  Time for last 1,000,000:    1s.  Last read position: chr5:13,781,057
INFO	2026-06-08 08:43:21	MarkDuplicates	Tracking 1193133 as yet unmatched pairs. 59577 records in RAM.
INFO	2026-06-08 08:43:23	MarkDuplicates	Read   173,000,000 records.  Elapsed time: 00:05:13s.  Time for last 1,000,000:    1s.  Last read position: chr5:14,378,048
INFO	2026-06-08 08:43:23	MarkDuplicates	Tracking 1197369 as yet unmatched pairs. 63771 records in RAM.
INFO	2026-06-08 08:43:24	MarkDuplicates	Read   174,000,000 records.  Elapsed time: 00:05:14s.  Time for last 1,000,000:    1s.  Last read position: chr5:14,497,000
INFO	2026-06-08 08:43:24	MarkDuplicates	Tracking 1191581 as yet unmatched pairs. 57977 records in RAM.
INFO	2026-06-08 08:43:26	MarkDuplicates	Read   175,000,000 records.  Elapsed time: 00:05:16s.  Time for last 1,000,000:    1s.  Last read position: chr5:33,661,931
INFO	2026-06-08 08:43:26	MarkDuplicates	Tracking 1185118 as yet unmatched pairs. 51501 records in RAM.
INFO	2026-06-08 08:43:28	MarkDuplicates	Read   176,000,000 records.  Elapsed time: 00:05:18s.  Time for last 1,000,000:    1s.  Last read position: chr5:39,377,009
INFO	2026-06-08 08:43:28	MarkDuplicates	Tracking 1183559 as yet unmatched pairs. 49886 records in RAM.
INFO	2026-06-08 08:43:29	MarkDuplicates	Read   177,000,000 records.  Elapsed time: 00:05:19s.  Time for last 1,000,000:    1s.  Last read position: chr5:55,954,849
INFO	2026-06-08 08:43:29	MarkDuplicates	Tracking 1181913 as yet unmatched pairs. 48201 records in RAM.
INFO	2026-06-08 08:43:31	MarkDuplicates	Read   178,000,000 records.  Elapsed time: 00:05:21s.  Time for last 1,000,000:    1s.  Last read position: chr5:70,108,301
INFO	2026-06-08 08:43:31	MarkDuplicates	Tracking 1177915 as yet unmatched pairs. 44162 records in RAM.
INFO	2026-06-08 08:43:33	MarkDuplicates	Read   179,000,000 records.  Elapsed time: 00:05:23s.  Time for last 1,000,000:    2s.  Last read position: chr5:76,733,310
INFO	2026-06-08 08:43:33	MarkDuplicates	Tracking 1176198 as yet unmatched pairs. 42421 records in RAM.
INFO	2026-06-08 08:43:34	MarkDuplicates	Read   180,000,000 records.  Elapsed time: 00:05:24s.  Time for last 1,000,000:    1s.  Last read position: chr5:83,537,762
INFO	2026-06-08 08:43:34	MarkDuplicates	Tracking 1175433 as yet unmatched pairs. 41615 records in RAM.
INFO	2026-06-08 08:43:36	MarkDuplicates	Read   181,000,000 records.  Elapsed time: 00:05:26s.  Time for last 1,000,000:    1s.  Last read position: chr5:96,662,483
INFO	2026-06-08 08:43:36	MarkDuplicates	Tracking 1171439 as yet unmatched pairs. 37594 records in RAM.
INFO	2026-06-08 08:43:37	MarkDuplicates	Read   182,000,000 records.  Elapsed time: 00:05:27s.  Time for last 1,000,000:    1s.  Last read position: chr5:119,529,958
INFO	2026-06-08 08:43:37	MarkDuplicates	Tracking 1168635 as yet unmatched pairs. 34758 records in RAM.
INFO	2026-06-08 08:43:39	MarkDuplicates	Read   183,000,000 records.  Elapsed time: 00:05:29s.  Time for last 1,000,000:    1s.  Last read position: chr5:134,201,994
INFO	2026-06-08 08:43:39	MarkDuplicates	Tracking 1166697 as yet unmatched pairs. 32799 records in RAM.
INFO	2026-06-08 08:43:41	MarkDuplicates	Read   184,000,000 records.  Elapsed time: 00:05:31s.  Time for last 1,000,000:    1s.  Last read position: chr5:138,824,581
INFO	2026-06-08 08:43:41	MarkDuplicates	Tracking 1164371 as yet unmatched pairs. 30442 records in RAM.
INFO	2026-06-08 08:43:42	MarkDuplicates	Read   185,000,000 records.  Elapsed time: 00:05:32s.  Time for last 1,000,000:    1s.  Last read position: chr5:141,399,283
INFO	2026-06-08 08:43:42	MarkDuplicates	Tracking 1160883 as yet unmatched pairs. 26917 records in RAM.
INFO	2026-06-08 08:43:44	MarkDuplicates	Read   186,000,000 records.  Elapsed time: 00:05:34s.  Time for last 1,000,000:    1s.  Last read position: chr5:150,070,535
INFO	2026-06-08 08:43:44	MarkDuplicates	Tracking 1158440 as yet unmatched pairs. 24443 records in RAM.
INFO	2026-06-08 08:43:46	MarkDuplicates	Read   187,000,000 records.  Elapsed time: 00:05:36s.  Time for last 1,000,000:    2s.  Last read position: chr5:150,135,789
INFO	2026-06-08 08:43:46	MarkDuplicates	Tracking 1160650 as yet unmatched pairs. 26642 records in RAM.
INFO	2026-06-08 08:43:48	MarkDuplicates	Read   188,000,000 records.  Elapsed time: 00:05:38s.  Time for last 1,000,000:    1s.  Last read position: chr5:150,403,273
INFO	2026-06-08 08:43:48	MarkDuplicates	Tracking 1180465 as yet unmatched pairs. 46444 records in RAM.
INFO	2026-06-08 08:43:49	MarkDuplicates	Read   189,000,000 records.  Elapsed time: 00:05:39s.  Time for last 1,000,000:    1s.  Last read position: chr5:150,406,892
INFO	2026-06-08 08:43:49	MarkDuplicates	Tracking 1189775 as yet unmatched pairs. 55735 records in RAM.
INFO	2026-06-08 08:43:51	MarkDuplicates	Read   190,000,000 records.  Elapsed time: 00:05:41s.  Time for last 1,000,000:    1s.  Last read position: chr5:151,664,125
INFO	2026-06-08 08:43:51	MarkDuplicates	Tracking 1149217 as yet unmatched pairs. 15160 records in RAM.
INFO	2026-06-08 08:43:52	MarkDuplicates	Read   191,000,000 records.  Elapsed time: 00:05:42s.  Time for last 1,000,000:    1s.  Last read position: chr5:166,382,561
INFO	2026-06-08 08:43:52	MarkDuplicates	Tracking 1144340 as yet unmatched pairs. 10265 records in RAM.
INFO	2026-06-08 08:43:54	MarkDuplicates	Read   192,000,000 records.  Elapsed time: 00:05:44s.  Time for last 1,000,000:    1s.  Last read position: chr5:172,093,635
INFO	2026-06-08 08:43:54	MarkDuplicates	Tracking 1142407 as yet unmatched pairs. 8319 records in RAM.
INFO	2026-06-08 08:43:55	MarkDuplicates	Read   193,000,000 records.  Elapsed time: 00:05:45s.  Time for last 1,000,000:    1s.  Last read position: chr5:177,490,825
INFO	2026-06-08 08:43:55	MarkDuplicates	Tracking 1140769 as yet unmatched pairs. 6660 records in RAM.
INFO	2026-06-08 08:43:57	MarkDuplicates	Read   194,000,000 records.  Elapsed time: 00:05:47s.  Time for last 1,000,000:    1s.  Last read position: chr5:179,795,863
INFO	2026-06-08 08:43:57	MarkDuplicates	Tracking 1136960 as yet unmatched pairs. 2832 records in RAM.
INFO	2026-06-08 08:43:59	MarkDuplicates	Read   195,000,000 records.  Elapsed time: 00:05:49s.  Time for last 1,000,000:    2s.  Last read position: chr6:555,990
INFO	2026-06-08 08:43:59	MarkDuplicates	Tracking 1134460 as yet unmatched pairs. 72371 records in RAM.
INFO	2026-06-08 08:44:01	MarkDuplicates	Read   196,000,000 records.  Elapsed time: 00:05:51s.  Time for last 1,000,000:    1s.  Last read position: chr6:7,289,823
INFO	2026-06-08 08:44:01	MarkDuplicates	Tracking 1135426 as yet unmatched pairs. 73300 records in RAM.
INFO	2026-06-08 08:44:02	MarkDuplicates	Read   197,000,000 records.  Elapsed time: 00:05:52s.  Time for last 1,000,000:    1s.  Last read position: chr6:12,121,914
INFO	2026-06-08 08:44:02	MarkDuplicates	Tracking 1129126 as yet unmatched pairs. 66968 records in RAM.
INFO	2026-06-08 08:44:04	MarkDuplicates	Read   198,000,000 records.  Elapsed time: 00:05:54s.  Time for last 1,000,000:    1s.  Last read position: chr6:26,031,833
INFO	2026-06-08 08:44:04	MarkDuplicates	Tracking 1127293 as yet unmatched pairs. 65097 records in RAM.
INFO	2026-06-08 08:44:06	MarkDuplicates	Read   199,000,000 records.  Elapsed time: 00:05:56s.  Time for last 1,000,000:    1s.  Last read position: chr6:27,831,214
INFO	2026-06-08 08:44:06	MarkDuplicates	Tracking 1124891 as yet unmatched pairs. 62673 records in RAM.
INFO	2026-06-08 08:44:07	MarkDuplicates	Read   200,000,000 records.  Elapsed time: 00:05:57s.  Time for last 1,000,000:    1s.  Last read position: chr6:30,685,843
INFO	2026-06-08 08:44:07	MarkDuplicates	Tracking 1121530 as yet unmatched pairs. 59289 records in RAM.
INFO	2026-06-08 08:44:09	MarkDuplicates	Read   201,000,000 records.  Elapsed time: 00:05:59s.  Time for last 1,000,000:    1s.  Last read position: chr6:31,625,288
INFO	2026-06-08 08:44:09	MarkDuplicates	Tracking 1119763 as yet unmatched pairs. 57503 records in RAM.
INFO	2026-06-08 08:44:11	MarkDuplicates	Read   202,000,000 records.  Elapsed time: 00:06:01s.  Time for last 1,000,000:    1s.  Last read position: chr6:31,816,906
INFO	2026-06-08 08:44:11	MarkDuplicates	Tracking 1116318 as yet unmatched pairs. 54047 records in RAM.
INFO	2026-06-08 08:44:12	MarkDuplicates	Read   203,000,000 records.  Elapsed time: 00:06:02s.  Time for last 1,000,000:    1s.  Last read position: chr6:31,962,503
INFO	2026-06-08 08:44:12	MarkDuplicates	Tracking 1114244 as yet unmatched pairs. 51960 records in RAM.
INFO	2026-06-08 08:44:13	MarkDuplicates	Read   204,000,000 records.  Elapsed time: 00:06:03s.  Time for last 1,000,000:    1s.  Last read position: chr6:31,999,515
INFO	2026-06-08 08:44:13	MarkDuplicates	Tracking 1118254 as yet unmatched pairs. 55962 records in RAM.
INFO	2026-06-08 08:44:15	MarkDuplicates	Read   205,000,000 records.  Elapsed time: 00:06:05s.  Time for last 1,000,000:    1s.  Last read position: chr6:32,030,017
INFO	2026-06-08 08:44:15	MarkDuplicates	Tracking 1114055 as yet unmatched pairs. 51758 records in RAM.
INFO	2026-06-08 08:44:17	MarkDuplicates	Read   206,000,000 records.  Elapsed time: 00:06:06s.  Time for last 1,000,000:    1s.  Last read position: chr6:32,841,545
INFO	2026-06-08 08:44:17	MarkDuplicates	Tracking 1108878 as yet unmatched pairs. 46570 records in RAM.
INFO	2026-06-08 08:44:18	MarkDuplicates	Read   207,000,000 records.  Elapsed time: 00:06:08s.  Time for last 1,000,000:    1s.  Last read position: chr6:33,319,759
INFO	2026-06-08 08:44:18	MarkDuplicates	Tracking 1106241 as yet unmatched pairs. 43916 records in RAM.
INFO	2026-06-08 08:44:20	MarkDuplicates	Read   208,000,000 records.  Elapsed time: 00:06:10s.  Time for last 1,000,000:    1s.  Last read position: chr6:35,469,006
INFO	2026-06-08 08:44:20	MarkDuplicates	Tracking 1104046 as yet unmatched pairs. 41703 records in RAM.
INFO	2026-06-08 08:44:21	MarkDuplicates	Read   209,000,000 records.  Elapsed time: 00:06:11s.  Time for last 1,000,000:    1s.  Last read position: chr6:41,937,269
INFO	2026-06-08 08:44:21	MarkDuplicates	Tracking 1100830 as yet unmatched pairs. 38448 records in RAM.
INFO	2026-06-08 08:44:23	MarkDuplicates	Read   210,000,000 records.  Elapsed time: 00:06:13s.  Time for last 1,000,000:    1s.  Last read position: chr6:43,516,747
INFO	2026-06-08 08:44:23	MarkDuplicates	Tracking 1098139 as yet unmatched pairs. 35743 records in RAM.
INFO	2026-06-08 08:44:25	MarkDuplicates	Read   211,000,000 records.  Elapsed time: 00:06:14s.  Time for last 1,000,000:    1s.  Last read position: chr6:49,463,423
INFO	2026-06-08 08:44:25	MarkDuplicates	Tracking 1095481 as yet unmatched pairs. 33058 records in RAM.
INFO	2026-06-08 08:44:26	MarkDuplicates	Read   212,000,000 records.  Elapsed time: 00:06:16s.  Time for last 1,000,000:    1s.  Last read position: chr6:63,685,216
INFO	2026-06-08 08:44:26	MarkDuplicates	Tracking 1094025 as yet unmatched pairs. 31533 records in RAM.
INFO	2026-06-08 08:44:28	MarkDuplicates	Read   213,000,000 records.  Elapsed time: 00:06:18s.  Time for last 1,000,000:    1s.  Last read position: chr6:75,148,455
INFO	2026-06-08 08:44:28	MarkDuplicates	Tracking 1092597 as yet unmatched pairs. 30063 records in RAM.
INFO	2026-06-08 08:44:30	MarkDuplicates	Read   214,000,000 records.  Elapsed time: 00:06:20s.  Time for last 1,000,000:    1s.  Last read position: chr6:82,181,988
INFO	2026-06-08 08:44:30	MarkDuplicates	Tracking 1088335 as yet unmatched pairs. 25782 records in RAM.
INFO	2026-06-08 08:44:32	MarkDuplicates	Read   215,000,000 records.  Elapsed time: 00:06:22s.  Time for last 1,000,000:    2s.  Last read position: chr6:89,738,437
INFO	2026-06-08 08:44:32	MarkDuplicates	Tracking 1085922 as yet unmatched pairs. 23330 records in RAM.
INFO	2026-06-08 08:44:34	MarkDuplicates	Read   216,000,000 records.  Elapsed time: 00:06:24s.  Time for last 1,000,000:    1s.  Last read position: chr6:108,664,084
INFO	2026-06-08 08:44:34	MarkDuplicates	Tracking 1083940 as yet unmatched pairs. 21295 records in RAM.
INFO	2026-06-08 08:44:35	MarkDuplicates	Read   217,000,000 records.  Elapsed time: 00:06:25s.  Time for last 1,000,000:    1s.  Last read position: chr6:116,278,897
INFO	2026-06-08 08:44:35	MarkDuplicates	Tracking 1080826 as yet unmatched pairs. 18163 records in RAM.
INFO	2026-06-08 08:44:38	MarkDuplicates	Read   218,000,000 records.  Elapsed time: 00:06:28s.  Time for last 1,000,000:    2s.  Last read position: chr6:131,282,436
INFO	2026-06-08 08:44:38	MarkDuplicates	Tracking 1078352 as yet unmatched pairs. 15652 records in RAM.
INFO	2026-06-08 08:44:39	MarkDuplicates	Read   219,000,000 records.  Elapsed time: 00:06:29s.  Time for last 1,000,000:    1s.  Last read position: chr6:139,034,177
INFO	2026-06-08 08:44:39	MarkDuplicates	Tracking 1076071 as yet unmatched pairs. 13343 records in RAM.
INFO	2026-06-08 08:44:41	MarkDuplicates	Read   220,000,000 records.  Elapsed time: 00:06:31s.  Time for last 1,000,000:    1s.  Last read position: chr6:149,683,443
INFO	2026-06-08 08:44:41	MarkDuplicates	Tracking 1074032 as yet unmatched pairs. 11260 records in RAM.
INFO	2026-06-08 08:44:42	MarkDuplicates	Read   221,000,000 records.  Elapsed time: 00:06:32s.  Time for last 1,000,000:    1s.  Last read position: chr6:156,829,322
INFO	2026-06-08 08:44:42	MarkDuplicates	Tracking 1071293 as yet unmatched pairs. 8495 records in RAM.
INFO	2026-06-08 08:44:44	MarkDuplicates	Read   222,000,000 records.  Elapsed time: 00:06:34s.  Time for last 1,000,000:    1s.  Last read position: chr6:159,233,297
INFO	2026-06-08 08:44:44	MarkDuplicates	Tracking 1068130 as yet unmatched pairs. 5307 records in RAM.
INFO	2026-06-08 08:44:46	MarkDuplicates	Read   223,000,000 records.  Elapsed time: 00:06:36s.  Time for last 1,000,000:    1s.  Last read position: chr6:166,500,907
INFO	2026-06-08 08:44:46	MarkDuplicates	Tracking 1065695 as yet unmatched pairs. 2843 records in RAM.
INFO	2026-06-08 08:44:48	MarkDuplicates	Read   224,000,000 records.  Elapsed time: 00:06:38s.  Time for last 1,000,000:    2s.  Last read position: chr7:195,606
INFO	2026-06-08 08:44:48	MarkDuplicates	Tracking 1063013 as yet unmatched pairs. 75007 records in RAM.
INFO	2026-06-08 08:44:49	MarkDuplicates	Read   225,000,000 records.  Elapsed time: 00:06:39s.  Time for last 1,000,000:    1s.  Last read position: chr7:4,786,358
INFO	2026-06-08 08:44:49	MarkDuplicates	Tracking 1059450 as yet unmatched pairs. 71425 records in RAM.
INFO	2026-06-08 08:44:51	MarkDuplicates	Read   226,000,000 records.  Elapsed time: 00:06:41s.  Time for last 1,000,000:    1s.  Last read position: chr7:5,527,871
INFO	2026-06-08 08:44:51	MarkDuplicates	Tracking 1068757 as yet unmatched pairs. 80718 records in RAM.
INFO	2026-06-08 08:44:53	MarkDuplicates	Read   227,000,000 records.  Elapsed time: 00:06:43s.  Time for last 1,000,000:    1s.  Last read position: chr7:5,529,202
INFO	2026-06-08 08:44:53	MarkDuplicates	Tracking 1082071 as yet unmatched pairs. 94018 records in RAM.
INFO	2026-06-08 08:44:54	MarkDuplicates	Read   228,000,000 records.  Elapsed time: 00:06:44s.  Time for last 1,000,000:    1s.  Last read position: chr7:6,697,645
INFO	2026-06-08 08:44:54	MarkDuplicates	Tracking 1051007 as yet unmatched pairs. 62932 records in RAM.
INFO	2026-06-08 08:44:56	MarkDuplicates	Read   229,000,000 records.  Elapsed time: 00:06:46s.  Time for last 1,000,000:    1s.  Last read position: chr7:23,274,107
INFO	2026-06-08 08:44:56	MarkDuplicates	Tracking 1049362 as yet unmatched pairs. 61258 records in RAM.
INFO	2026-06-08 08:44:57	MarkDuplicates	Read   230,000,000 records.  Elapsed time: 00:06:47s.  Time for last 1,000,000:    1s.  Last read position: chr7:35,832,888
INFO	2026-06-08 08:44:57	MarkDuplicates	Tracking 1046653 as yet unmatched pairs. 58520 records in RAM.
INFO	2026-06-08 08:44:59	MarkDuplicates	Read   231,000,000 records.  Elapsed time: 00:06:49s.  Time for last 1,000,000:    1s.  Last read position: chr7:44,074,448
INFO	2026-06-08 08:44:59	MarkDuplicates	Tracking 1043656 as yet unmatched pairs. 55493 records in RAM.
INFO	2026-06-08 08:45:01	MarkDuplicates	Read   232,000,000 records.  Elapsed time: 00:06:51s.  Time for last 1,000,000:    1s.  Last read position: chr7:44,121,893
INFO	2026-06-08 08:45:01	MarkDuplicates	Tracking 1041138 as yet unmatched pairs. 52968 records in RAM.
INFO	2026-06-08 08:45:02	MarkDuplicates	Read   233,000,000 records.  Elapsed time: 00:06:52s.  Time for last 1,000,000:    1s.  Last read position: chr7:55,165,380
INFO	2026-06-08 08:45:02	MarkDuplicates	Tracking 1038317 as yet unmatched pairs. 50115 records in RAM.
INFO	2026-06-08 08:45:04	MarkDuplicates	Read   234,000,000 records.  Elapsed time: 00:06:54s.  Time for last 1,000,000:    2s.  Last read position: chr7:72,868,984
INFO	2026-06-08 08:45:04	MarkDuplicates	Tracking 1035820 as yet unmatched pairs. 47577 records in RAM.
INFO	2026-06-08 08:45:06	MarkDuplicates	Read   235,000,000 records.  Elapsed time: 00:06:56s.  Time for last 1,000,000:    1s.  Last read position: chr7:74,120,899
INFO	2026-06-08 08:45:06	MarkDuplicates	Tracking 1034556 as yet unmatched pairs. 46273 records in RAM.
INFO	2026-06-08 08:45:07	MarkDuplicates	Read   236,000,000 records.  Elapsed time: 00:06:57s.  Time for last 1,000,000:    1s.  Last read position: chr7:75,442,380
INFO	2026-06-08 08:45:07	MarkDuplicates	Tracking 1033037 as yet unmatched pairs. 44739 records in RAM.
INFO	2026-06-08 08:45:08	MarkDuplicates	Read   237,000,000 records.  Elapsed time: 00:06:58s.  Time for last 1,000,000:    1s.  Last read position: chr7:77,262,227
INFO	2026-06-08 08:45:08	MarkDuplicates	Tracking 1030536 as yet unmatched pairs. 42217 records in RAM.
INFO	2026-06-08 08:45:11	MarkDuplicates	Read   238,000,000 records.  Elapsed time: 00:07:01s.  Time for last 1,000,000:    2s.  Last read position: chr7:92,061,284
INFO	2026-06-08 08:45:11	MarkDuplicates	Tracking 1029185 as yet unmatched pairs. 40827 records in RAM.
INFO	2026-06-08 08:45:13	MarkDuplicates	Read   239,000,000 records.  Elapsed time: 00:07:03s.  Time for last 1,000,000:    2s.  Last read position: chr7:94,404,731
INFO	2026-06-08 08:45:13	MarkDuplicates	Tracking 1042608 as yet unmatched pairs. 54228 records in RAM.
INFO	2026-06-08 08:45:15	MarkDuplicates	Read   240,000,000 records.  Elapsed time: 00:07:05s.  Time for last 1,000,000:    1s.  Last read position: chr7:94,416,458
INFO	2026-06-08 08:45:15	MarkDuplicates	Tracking 1037039 as yet unmatched pairs. 48645 records in RAM.
INFO	2026-06-08 08:45:16	MarkDuplicates	Read   241,000,000 records.  Elapsed time: 00:07:06s.  Time for last 1,000,000:    1s.  Last read position: chr7:94,428,310
INFO	2026-06-08 08:45:16	MarkDuplicates	Tracking 1025031 as yet unmatched pairs. 36615 records in RAM.
INFO	2026-06-08 08:45:18	MarkDuplicates	Read   242,000,000 records.  Elapsed time: 00:07:08s.  Time for last 1,000,000:    1s.  Last read position: chr7:99,392,694
INFO	2026-06-08 08:45:18	MarkDuplicates	Tracking 1017035 as yet unmatched pairs. 28588 records in RAM.
INFO	2026-06-08 08:45:20	MarkDuplicates	Read   243,000,000 records.  Elapsed time: 00:07:10s.  Time for last 1,000,000:    1s.  Last read position: chr7:100,572,541
INFO	2026-06-08 08:45:20	MarkDuplicates	Tracking 1014564 as yet unmatched pairs. 26105 records in RAM.
INFO	2026-06-08 08:45:21	MarkDuplicates	Read   244,000,000 records.  Elapsed time: 00:07:11s.  Time for last 1,000,000:    1s.  Last read position: chr7:102,355,864
INFO	2026-06-08 08:45:21	MarkDuplicates	Tracking 1011791 as yet unmatched pairs. 23318 records in RAM.
INFO	2026-06-08 08:45:22	MarkDuplicates	Read   245,000,000 records.  Elapsed time: 00:07:12s.  Time for last 1,000,000:    1s.  Last read position: chr7:103,119,739
INFO	2026-06-08 08:45:22	MarkDuplicates	Tracking 1010659 as yet unmatched pairs. 22177 records in RAM.
INFO	2026-06-08 08:45:24	MarkDuplicates	Read   246,000,000 records.  Elapsed time: 00:07:14s.  Time for last 1,000,000:    1s.  Last read position: chr7:107,998,485
INFO	2026-06-08 08:45:24	MarkDuplicates	Tracking 1009058 as yet unmatched pairs. 20536 records in RAM.
INFO	2026-06-08 08:46:25	MarkDuplicates	Read   247,000,000 records.  Elapsed time: 00:08:15s.  Time for last 1,000,000:   61s.  Last read position: chr7:127,702,467
INFO	2026-06-08 08:46:25	MarkDuplicates	Tracking 1011204 as yet unmatched pairs. 22642 records in RAM.
INFO	2026-06-08 08:46:27	MarkDuplicates	Read   248,000,000 records.  Elapsed time: 00:08:17s.  Time for last 1,000,000:    1s.  Last read position: chr7:128,767,605
INFO	2026-06-08 08:46:27	MarkDuplicates	Tracking 1004304 as yet unmatched pairs. 15722 records in RAM.
INFO	2026-06-08 08:46:29	MarkDuplicates	Read   249,000,000 records.  Elapsed time: 00:08:19s.  Time for last 1,000,000:    1s.  Last read position: chr7:135,950,638
INFO	2026-06-08 08:46:29	MarkDuplicates	Tracking 1001383 as yet unmatched pairs. 12765 records in RAM.
INFO	2026-06-08 08:46:30	MarkDuplicates	Read   250,000,000 records.  Elapsed time: 00:08:20s.  Time for last 1,000,000:    1s.  Last read position: chr7:139,716,873
INFO	2026-06-08 08:46:30	MarkDuplicates	Tracking 999682 as yet unmatched pairs. 11050 records in RAM.
INFO	2026-06-08 08:46:32	MarkDuplicates	Read   251,000,000 records.  Elapsed time: 00:08:22s.  Time for last 1,000,000:    1s.  Last read position: chr7:143,863,652
INFO	2026-06-08 08:46:32	MarkDuplicates	Tracking 995919 as yet unmatched pairs. 7263 records in RAM.
INFO	2026-06-08 08:46:33	MarkDuplicates	Read   252,000,000 records.  Elapsed time: 00:08:23s.  Time for last 1,000,000:    1s.  Last read position: chr7:151,028,600
INFO	2026-06-08 08:46:33	MarkDuplicates	Tracking 993629 as yet unmatched pairs. 4963 records in RAM.
INFO	2026-06-08 08:46:35	MarkDuplicates	Read   253,000,000 records.  Elapsed time: 00:08:25s.  Time for last 1,000,000:    1s.  Last read position: chr7:152,262,862
INFO	2026-06-08 08:46:35	MarkDuplicates	Tracking 991259 as yet unmatched pairs. 2579 records in RAM.
INFO	2026-06-08 08:46:37	MarkDuplicates	Read   254,000,000 records.  Elapsed time: 00:08:27s.  Time for last 1,000,000:    2s.  Last read position: chr8:11,809,749
INFO	2026-06-08 08:46:37	MarkDuplicates	Tracking 989204 as yet unmatched pairs. 89141 records in RAM.
INFO	2026-06-08 08:46:38	MarkDuplicates	Read   255,000,000 records.  Elapsed time: 00:08:28s.  Time for last 1,000,000:    1s.  Last read position: chr8:19,458,565
INFO	2026-06-08 08:46:38	MarkDuplicates	Tracking 985493 as yet unmatched pairs. 85415 records in RAM.
INFO	2026-06-08 08:46:40	MarkDuplicates	Read   256,000,000 records.  Elapsed time: 00:08:30s.  Time for last 1,000,000:    1s.  Last read position: chr8:26,354,479
INFO	2026-06-08 08:46:40	MarkDuplicates	Tracking 982967 as yet unmatched pairs. 82841 records in RAM.
INFO	2026-06-08 08:46:41	MarkDuplicates	Read   257,000,000 records.  Elapsed time: 00:08:31s.  Time for last 1,000,000:    1s.  Last read position: chr8:37,844,533
INFO	2026-06-08 08:46:41	MarkDuplicates	Tracking 979802 as yet unmatched pairs. 79657 records in RAM.
INFO	2026-06-08 08:46:43	MarkDuplicates	Read   258,000,000 records.  Elapsed time: 00:08:33s.  Time for last 1,000,000:    1s.  Last read position: chr8:38,842,366
INFO	2026-06-08 08:46:43	MarkDuplicates	Tracking 978914 as yet unmatched pairs. 78761 records in RAM.
INFO	2026-06-08 08:46:45	MarkDuplicates	Read   259,000,000 records.  Elapsed time: 00:08:34s.  Time for last 1,000,000:    1s.  Last read position: chr8:47,737,462
INFO	2026-06-08 08:46:45	MarkDuplicates	Tracking 975067 as yet unmatched pairs. 74891 records in RAM.
INFO	2026-06-08 08:46:46	MarkDuplicates	Read   260,000,000 records.  Elapsed time: 00:08:36s.  Time for last 1,000,000:    1s.  Last read position: chr8:52,642,434
INFO	2026-06-08 08:46:46	MarkDuplicates	Tracking 972265 as yet unmatched pairs. 72070 records in RAM.
INFO	2026-06-08 08:46:47	MarkDuplicates	Read   261,000,000 records.  Elapsed time: 00:08:37s.  Time for last 1,000,000:    1s.  Last read position: chr8:60,742,768
INFO	2026-06-08 08:46:47	MarkDuplicates	Tracking 969969 as yet unmatched pairs. 69755 records in RAM.
INFO	2026-06-08 08:46:49	MarkDuplicates	Read   262,000,000 records.  Elapsed time: 00:08:39s.  Time for last 1,000,000:    2s.  Last read position: chr8:67,059,334
INFO	2026-06-08 08:46:49	MarkDuplicates	Tracking 967878 as yet unmatched pairs. 67627 records in RAM.
INFO	2026-06-08 08:46:51	MarkDuplicates	Read   263,000,000 records.  Elapsed time: 00:08:41s.  Time for last 1,000,000:    1s.  Last read position: chr8:70,156,059
INFO	2026-06-08 08:46:51	MarkDuplicates	Tracking 964884 as yet unmatched pairs. 64605 records in RAM.
INFO	2026-06-08 08:46:53	MarkDuplicates	Read   264,000,000 records.  Elapsed time: 00:08:42s.  Time for last 1,000,000:    1s.  Last read position: chr8:76,855,728
INFO	2026-06-08 08:46:53	MarkDuplicates	Tracking 962752 as yet unmatched pairs. 62467 records in RAM.
INFO	2026-06-08 08:46:54	MarkDuplicates	Read   265,000,000 records.  Elapsed time: 00:08:44s.  Time for last 1,000,000:    1s.  Last read position: chr8:93,808,917
INFO	2026-06-08 08:46:54	MarkDuplicates	Tracking 960388 as yet unmatched pairs. 60076 records in RAM.
INFO	2026-06-08 08:46:56	MarkDuplicates	Read   266,000,000 records.  Elapsed time: 00:08:46s.  Time for last 1,000,000:    1s.  Last read position: chr8:97,816,057
INFO	2026-06-08 08:46:56	MarkDuplicates	Tracking 959123 as yet unmatched pairs. 58783 records in RAM.
INFO	2026-06-08 08:46:57	MarkDuplicates	Read   267,000,000 records.  Elapsed time: 00:08:47s.  Time for last 1,000,000:    1s.  Last read position: chr8:100,258,607
INFO	2026-06-08 08:46:57	MarkDuplicates	Tracking 956040 as yet unmatched pairs. 55673 records in RAM.
INFO	2026-06-08 08:46:59	MarkDuplicates	Read   268,000,000 records.  Elapsed time: 00:08:49s.  Time for last 1,000,000:    1s.  Last read position: chr8:100,715,461
INFO	2026-06-08 08:46:59	MarkDuplicates	Tracking 960172 as yet unmatched pairs. 59778 records in RAM.
INFO	2026-06-08 08:47:00	MarkDuplicates	Read   269,000,000 records.  Elapsed time: 00:08:50s.  Time for last 1,000,000:    1s.  Last read position: chr8:102,288,230
INFO	2026-06-08 08:47:00	MarkDuplicates	Tracking 950849 as yet unmatched pairs. 50412 records in RAM.
INFO	2026-06-08 08:47:01	MarkDuplicates	Read   270,000,000 records.  Elapsed time: 00:08:51s.  Time for last 1,000,000:    1s.  Last read position: chr8:108,239,992
INFO	2026-06-08 08:47:01	MarkDuplicates	Tracking 956660 as yet unmatched pairs. 56203 records in RAM.
INFO	2026-06-08 08:47:03	MarkDuplicates	Read   271,000,000 records.  Elapsed time: 00:08:53s.  Time for last 1,000,000:    1s.  Last read position: chr8:115,604,112
INFO	2026-06-08 08:47:03	MarkDuplicates	Tracking 958813 as yet unmatched pairs. 58284 records in RAM.
INFO	2026-06-08 08:47:05	MarkDuplicates	Read   272,000,000 records.  Elapsed time: 00:08:55s.  Time for last 1,000,000:    1s.  Last read position: chr8:115,623,563
INFO	2026-06-08 08:47:05	MarkDuplicates	Tracking 953184 as yet unmatched pairs. 52637 records in RAM.
INFO	2026-06-08 08:47:06	MarkDuplicates	Read   273,000,000 records.  Elapsed time: 00:08:56s.  Time for last 1,000,000:    1s.  Last read position: chr8:123,534,794
INFO	2026-06-08 08:47:06	MarkDuplicates	Tracking 941600 as yet unmatched pairs. 41008 records in RAM.
INFO	2026-06-08 08:47:08	MarkDuplicates	Read   274,000,000 records.  Elapsed time: 00:08:58s.  Time for last 1,000,000:    1s.  Last read position: chr8:127,738,903
INFO	2026-06-08 08:47:08	MarkDuplicates	Tracking 940122 as yet unmatched pairs. 39508 records in RAM.
INFO	2026-06-08 08:47:09	MarkDuplicates	Read   275,000,000 records.  Elapsed time: 00:08:59s.  Time for last 1,000,000:    1s.  Last read position: chr8:140,300,504
INFO	2026-06-08 08:47:09	MarkDuplicates	Tracking 935771 as yet unmatched pairs. 35106 records in RAM.
INFO	2026-06-08 08:47:11	MarkDuplicates	Read   276,000,000 records.  Elapsed time: 00:09:01s.  Time for last 1,000,000:    1s.  Last read position: chr8:143,507,869
INFO	2026-06-08 08:47:11	MarkDuplicates	Tracking 932386 as yet unmatched pairs. 31679 records in RAM.
INFO	2026-06-08 08:47:13	MarkDuplicates	Read   277,000,000 records.  Elapsed time: 00:09:03s.  Time for last 1,000,000:    1s.  Last read position: chr8:143,728,225
INFO	2026-06-08 08:47:13	MarkDuplicates	Tracking 929440 as yet unmatched pairs. 28711 records in RAM.
INFO	2026-06-08 08:47:14	MarkDuplicates	Read   278,000,000 records.  Elapsed time: 00:09:04s.  Time for last 1,000,000:    1s.  Last read position: chr8:143,858,290
INFO	2026-06-08 08:47:14	MarkDuplicates	Tracking 927313 as yet unmatched pairs. 26576 records in RAM.
INFO	2026-06-08 08:47:15	MarkDuplicates	Read   279,000,000 records.  Elapsed time: 00:09:05s.  Time for last 1,000,000:    1s.  Last read position: chr8:143,859,610
INFO	2026-06-08 08:47:15	MarkDuplicates	Tracking 928929 as yet unmatched pairs. 28183 records in RAM.
INFO	2026-06-08 08:47:16	MarkDuplicates	Read   280,000,000 records.  Elapsed time: 00:09:06s.  Time for last 1,000,000:    1s.  Last read position: chr8:143,860,723
INFO	2026-06-08 08:47:16	MarkDuplicates	Tracking 928829 as yet unmatched pairs. 28083 records in RAM.
INFO	2026-06-08 08:47:17	MarkDuplicates	Read   281,000,000 records.  Elapsed time: 00:09:07s.  Time for last 1,000,000:    0s.  Last read position: chr8:143,861,602
INFO	2026-06-08 08:47:17	MarkDuplicates	Tracking 925691 as yet unmatched pairs. 24944 records in RAM.
INFO	2026-06-08 08:47:18	MarkDuplicates	Read   282,000,000 records.  Elapsed time: 00:09:08s.  Time for last 1,000,000:    1s.  Last read position: chr8:143,862,907
INFO	2026-06-08 08:47:18	MarkDuplicates	Tracking 932705 as yet unmatched pairs. 31953 records in RAM.
INFO	2026-06-08 08:47:20	MarkDuplicates	Read   283,000,000 records.  Elapsed time: 00:09:10s.  Time for last 1,000,000:    1s.  Last read position: chr8:143,863,789
INFO	2026-06-08 08:47:20	MarkDuplicates	Tracking 920962 as yet unmatched pairs. 20197 records in RAM.
INFO	2026-06-08 08:47:21	MarkDuplicates	Read   284,000,000 records.  Elapsed time: 00:09:11s.  Time for last 1,000,000:    1s.  Last read position: chr8:143,864,903
INFO	2026-06-08 08:47:21	MarkDuplicates	Tracking 921715 as yet unmatched pairs. 20949 records in RAM.
INFO	2026-06-08 08:47:22	MarkDuplicates	Read   285,000,000 records.  Elapsed time: 00:09:11s.  Time for last 1,000,000:    0s.  Last read position: chr8:143,866,204
INFO	2026-06-08 08:47:22	MarkDuplicates	Tracking 920257 as yet unmatched pairs. 19491 records in RAM.
INFO	2026-06-08 08:47:23	MarkDuplicates	Read   286,000,000 records.  Elapsed time: 00:09:13s.  Time for last 1,000,000:    1s.  Last read position: chr8:143,869,779
INFO	2026-06-08 08:47:23	MarkDuplicates	Tracking 920781 as yet unmatched pairs. 20004 records in RAM.
INFO	2026-06-08 08:47:24	MarkDuplicates	Read   287,000,000 records.  Elapsed time: 00:09:14s.  Time for last 1,000,000:    1s.  Last read position: chr8:143,919,332
INFO	2026-06-08 08:47:24	MarkDuplicates	Tracking 921418 as yet unmatched pairs. 20617 records in RAM.
INFO	2026-06-08 08:47:26	MarkDuplicates	Read   288,000,000 records.  Elapsed time: 00:09:16s.  Time for last 1,000,000:    1s.  Last read position: chr8:143,930,261
INFO	2026-06-08 08:47:26	MarkDuplicates	Tracking 913396 as yet unmatched pairs. 12580 records in RAM.
INFO	2026-06-08 08:47:28	MarkDuplicates	Read   289,000,000 records.  Elapsed time: 00:09:17s.  Time for last 1,000,000:    1s.  Last read position: chr8:144,163,773
INFO	2026-06-08 08:47:28	MarkDuplicates	Tracking 908880 as yet unmatched pairs. 8047 records in RAM.
INFO	2026-06-08 08:47:29	MarkDuplicates	Read   290,000,000 records.  Elapsed time: 00:09:19s.  Time for last 1,000,000:    1s.  Last read position: chr8:144,436,844
INFO	2026-06-08 08:47:29	MarkDuplicates	Tracking 905255 as yet unmatched pairs. 4395 records in RAM.
INFO	2026-06-08 08:47:30	MarkDuplicates	Read   291,000,000 records.  Elapsed time: 00:09:20s.  Time for last 1,000,000:    1s.  Last read position: chr8:144,791,993
INFO	2026-06-08 08:47:30	MarkDuplicates	Tracking 904127 as yet unmatched pairs. 3250 records in RAM.
INFO	2026-06-08 08:47:32	MarkDuplicates	Read   292,000,000 records.  Elapsed time: 00:09:22s.  Time for last 1,000,000:    1s.  Last read position: chr9:5,924,670
INFO	2026-06-08 08:47:32	MarkDuplicates	Tracking 899443 as yet unmatched pairs. 51985 records in RAM.
INFO	2026-06-08 08:47:34	MarkDuplicates	Read   293,000,000 records.  Elapsed time: 00:09:24s.  Time for last 1,000,000:    2s.  Last read position: chr9:19,116,373
INFO	2026-06-08 08:47:34	MarkDuplicates	Tracking 897741 as yet unmatched pairs. 50226 records in RAM.
INFO	2026-06-08 08:47:37	MarkDuplicates	Read   294,000,000 records.  Elapsed time: 00:09:27s.  Time for last 1,000,000:    2s.  Last read position: chr9:33,675,433
INFO	2026-06-08 08:47:37	MarkDuplicates	Tracking 894429 as yet unmatched pairs. 46889 records in RAM.
INFO	2026-06-08 08:47:39	MarkDuplicates	Read   295,000,000 records.  Elapsed time: 00:09:29s.  Time for last 1,000,000:    1s.  Last read position: chr9:35,712,029
INFO	2026-06-08 08:47:39	MarkDuplicates	Tracking 892098 as yet unmatched pairs. 44525 records in RAM.
INFO	2026-06-08 08:47:40	MarkDuplicates	Read   296,000,000 records.  Elapsed time: 00:09:30s.  Time for last 1,000,000:    1s.  Last read position: chr9:68,256,921
INFO	2026-06-08 08:47:40	MarkDuplicates	Tracking 889873 as yet unmatched pairs. 42264 records in RAM.
INFO	2026-06-08 08:47:42	MarkDuplicates	Read   297,000,000 records.  Elapsed time: 00:09:32s.  Time for last 1,000,000:    1s.  Last read position: chr9:87,728,679
INFO	2026-06-08 08:47:42	MarkDuplicates	Tracking 887770 as yet unmatched pairs. 40130 records in RAM.
INFO	2026-06-08 08:47:44	MarkDuplicates	Read   298,000,000 records.  Elapsed time: 00:09:33s.  Time for last 1,000,000:    1s.  Last read position: chr9:96,013,073
INFO	2026-06-08 08:47:44	MarkDuplicates	Tracking 884420 as yet unmatched pairs. 36762 records in RAM.
INFO	2026-06-08 08:47:45	MarkDuplicates	Read   299,000,000 records.  Elapsed time: 00:09:35s.  Time for last 1,000,000:    1s.  Last read position: chr9:105,521,106
INFO	2026-06-08 08:47:45	MarkDuplicates	Tracking 881968 as yet unmatched pairs. 34273 records in RAM.
INFO	2026-06-08 08:47:46	MarkDuplicates	Read   300,000,000 records.  Elapsed time: 00:09:36s.  Time for last 1,000,000:    1s.  Last read position: chr9:114,093,377
INFO	2026-06-08 08:47:46	MarkDuplicates	Tracking 880227 as yet unmatched pairs. 32467 records in RAM.
INFO	2026-06-08 08:47:48	MarkDuplicates	Read   301,000,000 records.  Elapsed time: 00:09:38s.  Time for last 1,000,000:    1s.  Last read position: chr9:115,086,512
INFO	2026-06-08 08:47:48	MarkDuplicates	Tracking 878776 as yet unmatched pairs. 30990 records in RAM.
INFO	2026-06-08 08:47:50	MarkDuplicates	Read   302,000,000 records.  Elapsed time: 00:09:40s.  Time for last 1,000,000:    1s.  Last read position: chr9:122,986,255
INFO	2026-06-08 08:47:50	MarkDuplicates	Tracking 874651 as yet unmatched pairs. 26842 records in RAM.
INFO	2026-06-08 08:47:51	MarkDuplicates	Read   303,000,000 records.  Elapsed time: 00:09:41s.  Time for last 1,000,000:    1s.  Last read position: chr9:127,454,927
INFO	2026-06-08 08:47:51	MarkDuplicates	Tracking 872284 as yet unmatched pairs. 24450 records in RAM.
INFO	2026-06-08 08:47:53	MarkDuplicates	Read   304,000,000 records.  Elapsed time: 00:09:43s.  Time for last 1,000,000:    1s.  Last read position: chr9:128,473,644
INFO	2026-06-08 08:47:53	MarkDuplicates	Tracking 868817 as yet unmatched pairs. 20957 records in RAM.
INFO	2026-06-08 08:47:56	MarkDuplicates	Read   305,000,000 records.  Elapsed time: 00:09:46s.  Time for last 1,000,000:    3s.  Last read position: chr9:129,134,840
INFO	2026-06-08 08:47:56	MarkDuplicates	Tracking 866414 as yet unmatched pairs. 18524 records in RAM.
INFO	2026-06-08 08:47:58	MarkDuplicates	Read   306,000,000 records.  Elapsed time: 00:09:48s.  Time for last 1,000,000:    1s.  Last read position: chr9:131,464,867
INFO	2026-06-08 08:47:58	MarkDuplicates	Tracking 864279 as yet unmatched pairs. 16361 records in RAM.
INFO	2026-06-08 08:48:01	MarkDuplicates	Read   307,000,000 records.  Elapsed time: 00:09:51s.  Time for last 1,000,000:    2s.  Last read position: chr9:133,349,031
INFO	2026-06-08 08:48:01	MarkDuplicates	Tracking 862869 as yet unmatched pairs. 14932 records in RAM.
INFO	2026-06-08 08:48:03	MarkDuplicates	Read   308,000,000 records.  Elapsed time: 00:09:53s.  Time for last 1,000,000:    1s.  Last read position: chr9:134,784,908
INFO	2026-06-08 08:48:03	MarkDuplicates	Tracking 858626 as yet unmatched pairs. 10662 records in RAM.
INFO	2026-06-08 08:48:04	MarkDuplicates	Read   309,000,000 records.  Elapsed time: 00:09:54s.  Time for last 1,000,000:    1s.  Last read position: chr9:136,475,629
INFO	2026-06-08 08:48:04	MarkDuplicates	Tracking 856065 as yet unmatched pairs. 8092 records in RAM.
INFO	2026-06-08 08:48:06	MarkDuplicates	Read   310,000,000 records.  Elapsed time: 00:09:56s.  Time for last 1,000,000:    1s.  Last read position: chr9:137,040,376
INFO	2026-06-08 08:48:06	MarkDuplicates	Tracking 853044 as yet unmatched pairs. 5053 records in RAM.
INFO	2026-06-08 08:48:08	MarkDuplicates	Read   311,000,000 records.  Elapsed time: 00:09:58s.  Time for last 1,000,000:    1s.  Last read position: chr9:137,716,967
INFO	2026-06-08 08:48:08	MarkDuplicates	Tracking 849362 as yet unmatched pairs. 1362 records in RAM.
INFO	2026-06-08 08:48:10	MarkDuplicates	Read   312,000,000 records.  Elapsed time: 00:10:00s.  Time for last 1,000,000:    2s.  Last read position: chr10:5,754,960
INFO	2026-06-08 08:48:10	MarkDuplicates	Tracking 846144 as yet unmatched pairs. 49702 records in RAM.
INFO	2026-06-08 08:48:11	MarkDuplicates	Read   313,000,000 records.  Elapsed time: 00:10:01s.  Time for last 1,000,000:    1s.  Last read position: chr10:12,035,339
INFO	2026-06-08 08:48:11	MarkDuplicates	Tracking 843670 as yet unmatched pairs. 47198 records in RAM.
INFO	2026-06-08 08:48:13	MarkDuplicates	Read   314,000,000 records.  Elapsed time: 00:10:03s.  Time for last 1,000,000:    1s.  Last read position: chr10:17,906,947
INFO	2026-06-08 08:48:13	MarkDuplicates	Tracking 840688 as yet unmatched pairs. 44169 records in RAM.
INFO	2026-06-08 08:48:15	MarkDuplicates	Read   315,000,000 records.  Elapsed time: 00:10:05s.  Time for last 1,000,000:    1s.  Last read position: chr10:24,585,782
INFO	2026-06-08 08:48:15	MarkDuplicates	Tracking 839672 as yet unmatched pairs. 43113 records in RAM.
INFO	2026-06-08 08:48:17	MarkDuplicates	Read   316,000,000 records.  Elapsed time: 00:10:07s.  Time for last 1,000,000:    1s.  Last read position: chr10:31,510,788
INFO	2026-06-08 08:48:17	MarkDuplicates	Tracking 836248 as yet unmatched pairs. 39671 records in RAM.
INFO	2026-06-08 08:48:18	MarkDuplicates	Read   317,000,000 records.  Elapsed time: 00:10:08s.  Time for last 1,000,000:    1s.  Last read position: chr10:32,911,644
INFO	2026-06-08 08:48:18	MarkDuplicates	Tracking 835479 as yet unmatched pairs. 38899 records in RAM.
INFO	2026-06-08 08:48:20	MarkDuplicates	Read   318,000,000 records.  Elapsed time: 00:10:09s.  Time for last 1,000,000:    1s.  Last read position: chr10:42,793,894
INFO	2026-06-08 08:48:20	MarkDuplicates	Tracking 831469 as yet unmatched pairs. 34872 records in RAM.
INFO	2026-06-08 08:48:21	MarkDuplicates	Read   319,000,000 records.  Elapsed time: 00:10:11s.  Time for last 1,000,000:    1s.  Last read position: chr10:48,374,551
INFO	2026-06-08 08:48:21	MarkDuplicates	Tracking 829530 as yet unmatched pairs. 32913 records in RAM.
INFO	2026-06-08 08:48:22	MarkDuplicates	Read   320,000,000 records.  Elapsed time: 00:10:12s.  Time for last 1,000,000:    1s.  Last read position: chr10:63,343,745
INFO	2026-06-08 08:48:22	MarkDuplicates	Tracking 827064 as yet unmatched pairs. 30426 records in RAM.
INFO	2026-06-08 08:48:24	MarkDuplicates	Read   321,000,000 records.  Elapsed time: 00:10:14s.  Time for last 1,000,000:    1s.  Last read position: chr10:71,299,193
INFO	2026-06-08 08:48:24	MarkDuplicates	Tracking 824640 as yet unmatched pairs. 27973 records in RAM.
INFO	2026-06-08 08:48:25	MarkDuplicates	Read   322,000,000 records.  Elapsed time: 00:10:15s.  Time for last 1,000,000:    1s.  Last read position: chr10:73,815,223
INFO	2026-06-08 08:48:25	MarkDuplicates	Tracking 822035 as yet unmatched pairs. 25351 records in RAM.
INFO	2026-06-08 08:48:27	MarkDuplicates	Read   323,000,000 records.  Elapsed time: 00:10:17s.  Time for last 1,000,000:    1s.  Last read position: chr10:77,817,828
INFO	2026-06-08 08:48:27	MarkDuplicates	Tracking 824687 as yet unmatched pairs. 27968 records in RAM.
INFO	2026-06-08 08:48:28	MarkDuplicates	Read   324,000,000 records.  Elapsed time: 00:10:18s.  Time for last 1,000,000:    1s.  Last read position: chr10:78,035,689
INFO	2026-06-08 08:48:28	MarkDuplicates	Tracking 831760 as yet unmatched pairs. 35028 records in RAM.
INFO	2026-06-08 08:48:30	MarkDuplicates	Read   325,000,000 records.  Elapsed time: 00:10:20s.  Time for last 1,000,000:    1s.  Last read position: chr10:86,500,596
INFO	2026-06-08 08:48:30	MarkDuplicates	Tracking 814404 as yet unmatched pairs. 17663 records in RAM.
INFO	2026-06-08 08:48:31	MarkDuplicates	Read   326,000,000 records.  Elapsed time: 00:10:21s.  Time for last 1,000,000:    1s.  Last read position: chr10:92,028,793
INFO	2026-06-08 08:48:31	MarkDuplicates	Tracking 811872 as yet unmatched pairs. 15108 records in RAM.
INFO	2026-06-08 08:48:33	MarkDuplicates	Read   327,000,000 records.  Elapsed time: 00:10:23s.  Time for last 1,000,000:    1s.  Last read position: chr10:97,459,233
INFO	2026-06-08 08:48:33	MarkDuplicates	Tracking 809692 as yet unmatched pairs. 12915 records in RAM.
INFO	2026-06-08 08:48:35	MarkDuplicates	Read   328,000,000 records.  Elapsed time: 00:10:25s.  Time for last 1,000,000:    1s.  Last read position: chr10:102,159,494
INFO	2026-06-08 08:48:35	MarkDuplicates	Tracking 806801 as yet unmatched pairs. 9989 records in RAM.
INFO	2026-06-08 08:48:36	MarkDuplicates	Read   329,000,000 records.  Elapsed time: 00:10:26s.  Time for last 1,000,000:    1s.  Last read position: chr10:110,901,594
INFO	2026-06-08 08:48:36	MarkDuplicates	Tracking 804261 as yet unmatched pairs. 7416 records in RAM.
INFO	2026-06-08 08:48:38	MarkDuplicates	Read   330,000,000 records.  Elapsed time: 00:10:28s.  Time for last 1,000,000:    1s.  Last read position: chr10:119,651,762
INFO	2026-06-08 08:48:38	MarkDuplicates	Tracking 801896 as yet unmatched pairs. 5037 records in RAM.
INFO	2026-06-08 08:48:39	MarkDuplicates	Read   331,000,000 records.  Elapsed time: 00:10:29s.  Time for last 1,000,000:    1s.  Last read position: chr10:125,841,253
INFO	2026-06-08 08:48:39	MarkDuplicates	Tracking 799524 as yet unmatched pairs. 2644 records in RAM.
INFO	2026-06-08 08:48:42	MarkDuplicates	Read   332,000,000 records.  Elapsed time: 00:10:32s.  Time for last 1,000,000:    2s.  Last read position: chr11:235,987
INFO	2026-06-08 08:48:42	MarkDuplicates	Tracking 796826 as yet unmatched pairs. 108185 records in RAM.
INFO	2026-06-08 08:48:43	MarkDuplicates	Read   333,000,000 records.  Elapsed time: 00:10:33s.  Time for last 1,000,000:    1s.  Last read position: chr11:319,753
INFO	2026-06-08 08:48:43	MarkDuplicates	Tracking 799752 as yet unmatched pairs. 111106 records in RAM.
INFO	2026-06-08 08:48:45	MarkDuplicates	Read   334,000,000 records.  Elapsed time: 00:10:35s.  Time for last 1,000,000:    1s.  Last read position: chr11:681,015
INFO	2026-06-08 08:48:45	MarkDuplicates	Tracking 791213 as yet unmatched pairs. 102555 records in RAM.
INFO	2026-06-08 08:48:47	MarkDuplicates	Read   335,000,000 records.  Elapsed time: 00:10:37s.  Time for last 1,000,000:    2s.  Last read position: chr11:1,016,609
INFO	2026-06-08 08:48:47	MarkDuplicates	Tracking 790818 as yet unmatched pairs. 102140 records in RAM.
INFO	2026-06-08 08:48:49	MarkDuplicates	Read   336,000,000 records.  Elapsed time: 00:10:39s.  Time for last 1,000,000:    1s.  Last read position: chr11:1,032,011
INFO	2026-06-08 08:48:49	MarkDuplicates	Tracking 786902 as yet unmatched pairs. 98220 records in RAM.
INFO	2026-06-08 08:48:50	MarkDuplicates	Read   337,000,000 records.  Elapsed time: 00:10:40s.  Time for last 1,000,000:    1s.  Last read position: chr11:1,229,227
INFO	2026-06-08 08:48:50	MarkDuplicates	Tracking 784775 as yet unmatched pairs. 96091 records in RAM.
INFO	2026-06-08 08:48:52	MarkDuplicates	Read   338,000,000 records.  Elapsed time: 00:10:42s.  Time for last 1,000,000:    1s.  Last read position: chr11:1,243,127
INFO	2026-06-08 08:48:52	MarkDuplicates	Tracking 782503 as yet unmatched pairs. 93814 records in RAM.
INFO	2026-06-08 08:48:53	MarkDuplicates	Read   339,000,000 records.  Elapsed time: 00:10:43s.  Time for last 1,000,000:    1s.  Last read position: chr11:1,244,281
INFO	2026-06-08 08:48:53	MarkDuplicates	Tracking 786266 as yet unmatched pairs. 97574 records in RAM.
INFO	2026-06-08 08:48:55	MarkDuplicates	Read   340,000,000 records.  Elapsed time: 00:10:45s.  Time for last 1,000,000:    1s.  Last read position: chr11:1,245,276
INFO	2026-06-08 08:48:55	MarkDuplicates	Tracking 782853 as yet unmatched pairs. 94161 records in RAM.
INFO	2026-06-08 08:48:56	MarkDuplicates	Read   341,000,000 records.  Elapsed time: 00:10:46s.  Time for last 1,000,000:    1s.  Last read position: chr11:1,246,980
INFO	2026-06-08 08:48:56	MarkDuplicates	Tracking 780896 as yet unmatched pairs. 92202 records in RAM.
INFO	2026-06-08 08:48:57	MarkDuplicates	Read   342,000,000 records.  Elapsed time: 00:10:47s.  Time for last 1,000,000:    1s.  Last read position: chr11:1,248,172
INFO	2026-06-08 08:48:57	MarkDuplicates	Tracking 778263 as yet unmatched pairs. 89565 records in RAM.
INFO	2026-06-08 08:48:58	MarkDuplicates	Read   343,000,000 records.  Elapsed time: 00:10:48s.  Time for last 1,000,000:    1s.  Last read position: chr11:1,249,443
INFO	2026-06-08 08:48:58	MarkDuplicates	Tracking 778938 as yet unmatched pairs. 90240 records in RAM.
INFO	2026-06-08 08:48:59	MarkDuplicates	Read   344,000,000 records.  Elapsed time: 00:10:49s.  Time for last 1,000,000:    1s.  Last read position: chr11:1,251,051
INFO	2026-06-08 08:48:59	MarkDuplicates	Tracking 774593 as yet unmatched pairs. 85895 records in RAM.
INFO	2026-06-08 08:49:01	MarkDuplicates	Read   345,000,000 records.  Elapsed time: 00:10:51s.  Time for last 1,000,000:    1s.  Last read position: chr11:1,761,441
INFO	2026-06-08 08:49:01	MarkDuplicates	Tracking 771209 as yet unmatched pairs. 82505 records in RAM.
INFO	2026-06-08 08:49:03	MarkDuplicates	Read   346,000,000 records.  Elapsed time: 00:10:53s.  Time for last 1,000,000:    1s.  Last read position: chr11:6,478,561
INFO	2026-06-08 08:49:03	MarkDuplicates	Tracking 768566 as yet unmatched pairs. 79841 records in RAM.
INFO	2026-06-08 08:49:04	MarkDuplicates	Read   347,000,000 records.  Elapsed time: 00:10:54s.  Time for last 1,000,000:    1s.  Last read position: chr11:9,204,065
INFO	2026-06-08 08:49:04	MarkDuplicates	Tracking 765388 as yet unmatched pairs. 76655 records in RAM.
INFO	2026-06-08 08:49:06	MarkDuplicates	Read   348,000,000 records.  Elapsed time: 00:10:56s.  Time for last 1,000,000:    1s.  Last read position: chr11:12,216,227
INFO	2026-06-08 08:49:06	MarkDuplicates	Tracking 762737 as yet unmatched pairs. 73998 records in RAM.
INFO	2026-06-08 08:49:07	MarkDuplicates	Read   349,000,000 records.  Elapsed time: 00:10:57s.  Time for last 1,000,000:    1s.  Last read position: chr11:18,402,962
INFO	2026-06-08 08:49:07	MarkDuplicates	Tracking 763173 as yet unmatched pairs. 74409 records in RAM.
INFO	2026-06-08 08:49:09	MarkDuplicates	Read   350,000,000 records.  Elapsed time: 00:10:59s.  Time for last 1,000,000:    1s.  Last read position: chr11:33,706,458
INFO	2026-06-08 08:49:09	MarkDuplicates	Tracking 757486 as yet unmatched pairs. 68703 records in RAM.
INFO	2026-06-08 08:49:10	MarkDuplicates	Read   351,000,000 records.  Elapsed time: 00:11:00s.  Time for last 1,000,000:    1s.  Last read position: chr11:44,936,680
INFO	2026-06-08 08:49:10	MarkDuplicates	Tracking 756688 as yet unmatched pairs. 67883 records in RAM.
INFO	2026-06-08 08:49:12	MarkDuplicates	Read   352,000,000 records.  Elapsed time: 00:11:02s.  Time for last 1,000,000:    1s.  Last read position: chr11:47,178,915
INFO	2026-06-08 08:49:12	MarkDuplicates	Tracking 752416 as yet unmatched pairs. 63603 records in RAM.
INFO	2026-06-08 08:49:13	MarkDuplicates	Read   353,000,000 records.  Elapsed time: 00:11:03s.  Time for last 1,000,000:    1s.  Last read position: chr11:57,414,950
INFO	2026-06-08 08:49:13	MarkDuplicates	Tracking 749797 as yet unmatched pairs. 60968 records in RAM.
INFO	2026-06-08 08:49:15	MarkDuplicates	Read   354,000,000 records.  Elapsed time: 00:11:05s.  Time for last 1,000,000:    1s.  Last read position: chr11:60,384,981
INFO	2026-06-08 08:49:15	MarkDuplicates	Tracking 748515 as yet unmatched pairs. 59685 records in RAM.
INFO	2026-06-08 08:49:16	MarkDuplicates	Read   355,000,000 records.  Elapsed time: 00:11:06s.  Time for last 1,000,000:    1s.  Last read position: chr11:61,964,749
INFO	2026-06-08 08:49:16	MarkDuplicates	Tracking 746668 as yet unmatched pairs. 57819 records in RAM.
INFO	2026-06-08 08:49:18	MarkDuplicates	Read   356,000,000 records.  Elapsed time: 00:11:08s.  Time for last 1,000,000:    1s.  Last read position: chr11:62,270,984
INFO	2026-06-08 08:49:18	MarkDuplicates	Tracking 782985 as yet unmatched pairs. 94118 records in RAM.
INFO	2026-06-08 08:49:19	MarkDuplicates	Read   357,000,000 records.  Elapsed time: 00:11:09s.  Time for last 1,000,000:    1s.  Last read position: chr11:62,521,551
INFO	2026-06-08 08:49:19	MarkDuplicates	Tracking 743038 as yet unmatched pairs. 54164 records in RAM.
INFO	2026-06-08 08:49:21	MarkDuplicates	Read   358,000,000 records.  Elapsed time: 00:11:11s.  Time for last 1,000,000:    1s.  Last read position: chr11:62,527,490
INFO	2026-06-08 08:49:21	MarkDuplicates	Tracking 741689 as yet unmatched pairs. 52810 records in RAM.
INFO	2026-06-08 08:49:22	MarkDuplicates	Read   359,000,000 records.  Elapsed time: 00:11:12s.  Time for last 1,000,000:    1s.  Last read position: chr11:62,532,611
INFO	2026-06-08 08:49:22	MarkDuplicates	Tracking 739232 as yet unmatched pairs. 50344 records in RAM.
INFO	2026-06-08 08:49:24	MarkDuplicates	Read   360,000,000 records.  Elapsed time: 00:11:14s.  Time for last 1,000,000:    1s.  Last read position: chr11:62,786,274
INFO	2026-06-08 08:49:24	MarkDuplicates	Tracking 732643 as yet unmatched pairs. 43751 records in RAM.
INFO	2026-06-08 08:49:26	MarkDuplicates	Read   361,000,000 records.  Elapsed time: 00:11:15s.  Time for last 1,000,000:    1s.  Last read position: chr11:64,265,954
INFO	2026-06-08 08:49:26	MarkDuplicates	Tracking 729975 as yet unmatched pairs. 41061 records in RAM.
INFO	2026-06-08 08:49:27	MarkDuplicates	Read   362,000,000 records.  Elapsed time: 00:11:17s.  Time for last 1,000,000:    1s.  Last read position: chr11:65,289,810
INFO	2026-06-08 08:49:27	MarkDuplicates	Tracking 726787 as yet unmatched pairs. 37866 records in RAM.
INFO	2026-06-08 08:49:28	MarkDuplicates	Read   363,000,000 records.  Elapsed time: 00:11:18s.  Time for last 1,000,000:    1s.  Last read position: chr11:65,659,715
INFO	2026-06-08 08:49:28	MarkDuplicates	Tracking 726034 as yet unmatched pairs. 37039 records in RAM.
INFO	2026-06-08 08:49:30	MarkDuplicates	Read   364,000,000 records.  Elapsed time: 00:11:20s.  Time for last 1,000,000:    1s.  Last read position: chr11:66,514,436
INFO	2026-06-08 08:49:30	MarkDuplicates	Tracking 721146 as yet unmatched pairs. 32139 records in RAM.
INFO	2026-06-08 08:49:31	MarkDuplicates	Read   365,000,000 records.  Elapsed time: 00:11:21s.  Time for last 1,000,000:    1s.  Last read position: chr11:67,506,961
INFO	2026-06-08 08:49:31	MarkDuplicates	Tracking 718388 as yet unmatched pairs. 29358 records in RAM.
INFO	2026-06-08 08:49:33	MarkDuplicates	Read   366,000,000 records.  Elapsed time: 00:11:23s.  Time for last 1,000,000:    1s.  Last read position: chr11:69,648,054
INFO	2026-06-08 08:49:33	MarkDuplicates	Tracking 719188 as yet unmatched pairs. 30150 records in RAM.
INFO	2026-06-08 08:49:34	MarkDuplicates	Read   367,000,000 records.  Elapsed time: 00:11:24s.  Time for last 1,000,000:    1s.  Last read position: chr11:72,017,753
INFO	2026-06-08 08:49:34	MarkDuplicates	Tracking 712983 as yet unmatched pairs. 23922 records in RAM.
INFO	2026-06-08 08:49:36	MarkDuplicates	Read   368,000,000 records.  Elapsed time: 00:11:26s.  Time for last 1,000,000:    1s.  Last read position: chr11:74,949,328
INFO	2026-06-08 08:49:36	MarkDuplicates	Tracking 710162 as yet unmatched pairs. 21071 records in RAM.
INFO	2026-06-08 08:49:37	MarkDuplicates	Read   369,000,000 records.  Elapsed time: 00:11:27s.  Time for last 1,000,000:    1s.  Last read position: chr11:78,889,892
INFO	2026-06-08 08:49:37	MarkDuplicates	Tracking 707108 as yet unmatched pairs. 17997 records in RAM.
INFO	2026-06-08 08:49:39	MarkDuplicates	Read   370,000,000 records.  Elapsed time: 00:11:29s.  Time for last 1,000,000:    1s.  Last read position: chr11:95,836,207
INFO	2026-06-08 08:49:39	MarkDuplicates	Tracking 704794 as yet unmatched pairs. 15650 records in RAM.
INFO	2026-06-08 08:49:40	MarkDuplicates	Read   371,000,000 records.  Elapsed time: 00:11:30s.  Time for last 1,000,000:    1s.  Last read position: chr11:108,289,777
INFO	2026-06-08 08:49:40	MarkDuplicates	Tracking 702396 as yet unmatched pairs. 13229 records in RAM.
INFO	2026-06-08 08:49:42	MarkDuplicates	Read   372,000,000 records.  Elapsed time: 00:11:32s.  Time for last 1,000,000:    1s.  Last read position: chr11:117,204,269
INFO	2026-06-08 08:49:42	MarkDuplicates	Tracking 700876 as yet unmatched pairs. 11695 records in RAM.
INFO	2026-06-08 08:49:44	MarkDuplicates	Read   373,000,000 records.  Elapsed time: 00:11:34s.  Time for last 1,000,000:    1s.  Last read position: chr11:118,898,789
INFO	2026-06-08 08:49:44	MarkDuplicates	Tracking 697195 as yet unmatched pairs. 8002 records in RAM.
INFO	2026-06-08 08:49:45	MarkDuplicates	Read   374,000,000 records.  Elapsed time: 00:11:35s.  Time for last 1,000,000:    1s.  Last read position: chr11:120,481,557
INFO	2026-06-08 08:49:45	MarkDuplicates	Tracking 695125 as yet unmatched pairs. 5921 records in RAM.
INFO	2026-06-08 08:49:47	MarkDuplicates	Read   375,000,000 records.  Elapsed time: 00:11:37s.  Time for last 1,000,000:    1s.  Last read position: chr11:126,292,516
INFO	2026-06-08 08:49:47	MarkDuplicates	Tracking 692054 as yet unmatched pairs. 2842 records in RAM.
INFO	2026-06-08 08:49:48	MarkDuplicates	Read   376,000,000 records.  Elapsed time: 00:11:38s.  Time for last 1,000,000:    1s.  Last read position: chr11:134,249,218
INFO	2026-06-08 08:49:48	MarkDuplicates	Tracking 689436 as yet unmatched pairs. 202 records in RAM.
INFO	2026-06-08 08:49:51	MarkDuplicates	Read   377,000,000 records.  Elapsed time: 00:11:41s.  Time for last 1,000,000:    2s.  Last read position: chr12:884,181
INFO	2026-06-08 08:49:51	MarkDuplicates	Tracking 690231 as yet unmatched pairs. 88516 records in RAM.
INFO	2026-06-08 08:49:52	MarkDuplicates	Read   378,000,000 records.  Elapsed time: 00:11:42s.  Time for last 1,000,000:    1s.  Last read position: chr12:2,800,038
INFO	2026-06-08 08:49:52	MarkDuplicates	Tracking 686559 as yet unmatched pairs. 84814 records in RAM.
INFO	2026-06-08 08:49:54	MarkDuplicates	Read   379,000,000 records.  Elapsed time: 00:11:44s.  Time for last 1,000,000:    1s.  Last read position: chr12:6,348,958
INFO	2026-06-08 08:49:54	MarkDuplicates	Tracking 682002 as yet unmatched pairs. 80243 records in RAM.
INFO	2026-06-08 08:49:56	MarkDuplicates	Read   380,000,000 records.  Elapsed time: 00:11:46s.  Time for last 1,000,000:    2s.  Last read position: chr12:6,867,590
INFO	2026-06-08 08:49:56	MarkDuplicates	Tracking 679031 as yet unmatched pairs. 77267 records in RAM.
INFO	2026-06-08 08:49:57	MarkDuplicates	Read   381,000,000 records.  Elapsed time: 00:11:47s.  Time for last 1,000,000:    1s.  Last read position: chr12:7,497,084
INFO	2026-06-08 08:49:57	MarkDuplicates	Tracking 677694 as yet unmatched pairs. 75922 records in RAM.
INFO	2026-06-08 08:49:59	MarkDuplicates	Read   382,000,000 records.  Elapsed time: 00:11:49s.  Time for last 1,000,000:    1s.  Last read position: chr12:10,882,341
INFO	2026-06-08 08:49:59	MarkDuplicates	Tracking 673906 as yet unmatched pairs. 72126 records in RAM.
INFO	2026-06-08 08:50:01	MarkDuplicates	Read   383,000,000 records.  Elapsed time: 00:11:50s.  Time for last 1,000,000:    1s.  Last read position: chr12:14,424,297
INFO	2026-06-08 08:50:01	MarkDuplicates	Tracking 673217 as yet unmatched pairs. 71421 records in RAM.
INFO	2026-06-08 08:50:03	MarkDuplicates	Read   384,000,000 records.  Elapsed time: 00:11:53s.  Time for last 1,000,000:    2s.  Last read position: chr12:30,710,169
INFO	2026-06-08 08:50:03	MarkDuplicates	Tracking 669023 as yet unmatched pairs. 67211 records in RAM.
INFO	2026-06-08 08:50:05	MarkDuplicates	Read   385,000,000 records.  Elapsed time: 00:11:55s.  Time for last 1,000,000:    1s.  Last read position: chr12:46,371,194
INFO	2026-06-08 08:50:05	MarkDuplicates	Tracking 666708 as yet unmatched pairs. 64858 records in RAM.
INFO	2026-06-08 08:50:07	MarkDuplicates	Read   386,000,000 records.  Elapsed time: 00:11:57s.  Time for last 1,000,000:    1s.  Last read position: chr12:49,051,970
INFO	2026-06-08 08:50:07	MarkDuplicates	Tracking 663956 as yet unmatched pairs. 62096 records in RAM.
INFO	2026-06-08 08:50:09	MarkDuplicates	Read   387,000,000 records.  Elapsed time: 00:11:59s.  Time for last 1,000,000:    1s.  Last read position: chr12:49,791,926
INFO	2026-06-08 08:50:09	MarkDuplicates	Tracking 661593 as yet unmatched pairs. 59722 records in RAM.
INFO	2026-06-08 08:50:10	MarkDuplicates	Read   388,000,000 records.  Elapsed time: 00:12:00s.  Time for last 1,000,000:    1s.  Last read position: chr12:52,519,046
INFO	2026-06-08 08:50:10	MarkDuplicates	Tracking 658896 as yet unmatched pairs. 56998 records in RAM.
INFO	2026-06-08 08:50:12	MarkDuplicates	Read   389,000,000 records.  Elapsed time: 00:12:02s.  Time for last 1,000,000:    1s.  Last read position: chr12:53,307,661
INFO	2026-06-08 08:50:12	MarkDuplicates	Tracking 656403 as yet unmatched pairs. 54499 records in RAM.
INFO	2026-06-08 08:50:14	MarkDuplicates	Read   390,000,000 records.  Elapsed time: 00:12:04s.  Time for last 1,000,000:    1s.  Last read position: chr12:54,282,462
INFO	2026-06-08 08:50:14	MarkDuplicates	Tracking 654728 as yet unmatched pairs. 52784 records in RAM.
INFO	2026-06-08 08:50:15	MarkDuplicates	Read   391,000,000 records.  Elapsed time: 00:12:05s.  Time for last 1,000,000:    1s.  Last read position: chr12:56,152,623
INFO	2026-06-08 08:50:15	MarkDuplicates	Tracking 651298 as yet unmatched pairs. 49344 records in RAM.
INFO	2026-06-08 08:50:17	MarkDuplicates	Read   392,000,000 records.  Elapsed time: 00:12:07s.  Time for last 1,000,000:    1s.  Last read position: chr12:56,644,880
INFO	2026-06-08 08:50:17	MarkDuplicates	Tracking 649815 as yet unmatched pairs. 47844 records in RAM.
INFO	2026-06-08 08:50:19	MarkDuplicates	Read   393,000,000 records.  Elapsed time: 00:12:09s.  Time for last 1,000,000:    1s.  Last read position: chr12:57,154,580
INFO	2026-06-08 08:50:19	MarkDuplicates	Tracking 647792 as yet unmatched pairs. 45808 records in RAM.
INFO	2026-06-08 08:50:20	MarkDuplicates	Read   394,000,000 records.  Elapsed time: 00:12:10s.  Time for last 1,000,000:    1s.  Last read position: chr12:57,255,898
INFO	2026-06-08 08:50:20	MarkDuplicates	Tracking 643314 as yet unmatched pairs. 41328 records in RAM.
INFO	2026-06-08 08:50:22	MarkDuplicates	Read   395,000,000 records.  Elapsed time: 00:12:12s.  Time for last 1,000,000:    1s.  Last read position: chr12:64,111,852
INFO	2026-06-08 08:50:22	MarkDuplicates	Tracking 640746 as yet unmatched pairs. 38749 records in RAM.
INFO	2026-06-08 08:50:23	MarkDuplicates	Read   396,000,000 records.  Elapsed time: 00:12:13s.  Time for last 1,000,000:    1s.  Last read position: chr12:69,587,504
INFO	2026-06-08 08:50:23	MarkDuplicates	Tracking 639215 as yet unmatched pairs. 37208 records in RAM.
INFO	2026-06-08 08:50:25	MarkDuplicates	Read   397,000,000 records.  Elapsed time: 00:12:15s.  Time for last 1,000,000:    1s.  Last read position: chr12:88,084,698
INFO	2026-06-08 08:50:25	MarkDuplicates	Tracking 635859 as yet unmatched pairs. 33815 records in RAM.
INFO	2026-06-08 08:50:27	MarkDuplicates	Read   398,000,000 records.  Elapsed time: 00:12:16s.  Time for last 1,000,000:    1s.  Last read position: chr12:95,085,842
INFO	2026-06-08 08:50:27	MarkDuplicates	Tracking 633558 as yet unmatched pairs. 31506 records in RAM.
INFO	2026-06-08 08:50:28	MarkDuplicates	Read   399,000,000 records.  Elapsed time: 00:12:18s.  Time for last 1,000,000:    1s.  Last read position: chr12:101,634,581
INFO	2026-06-08 08:50:28	MarkDuplicates	Tracking 630836 as yet unmatched pairs. 28769 records in RAM.
INFO	2026-06-08 08:50:30	MarkDuplicates	Read   400,000,000 records.  Elapsed time: 00:12:20s.  Time for last 1,000,000:    1s.  Last read position: chr12:105,121,122
INFO	2026-06-08 08:50:30	MarkDuplicates	Tracking 628873 as yet unmatched pairs. 26783 records in RAM.
INFO	2026-06-08 08:50:31	MarkDuplicates	Read   401,000,000 records.  Elapsed time: 00:12:21s.  Time for last 1,000,000:    1s.  Last read position: chr12:109,938,438
INFO	2026-06-08 08:50:31	MarkDuplicates	Tracking 625975 as yet unmatched pairs. 23878 records in RAM.
INFO	2026-06-08 08:50:33	MarkDuplicates	Read   402,000,000 records.  Elapsed time: 00:12:23s.  Time for last 1,000,000:    1s.  Last read position: chr12:112,071,967
INFO	2026-06-08 08:50:33	MarkDuplicates	Tracking 623410 as yet unmatched pairs. 21290 records in RAM.
INFO	2026-06-08 08:50:34	MarkDuplicates	Read   403,000,000 records.  Elapsed time: 00:12:24s.  Time for last 1,000,000:    1s.  Last read position: chr12:113,176,850
INFO	2026-06-08 08:50:34	MarkDuplicates	Tracking 620795 as yet unmatched pairs. 18662 records in RAM.
INFO	2026-06-08 08:50:36	MarkDuplicates	Read   404,000,000 records.  Elapsed time: 00:12:26s.  Time for last 1,000,000:    1s.  Last read position: chr12:118,144,598
INFO	2026-06-08 08:50:36	MarkDuplicates	Tracking 618283 as yet unmatched pairs. 16122 records in RAM.
INFO	2026-06-08 08:50:38	MarkDuplicates	Read   405,000,000 records.  Elapsed time: 00:12:28s.  Time for last 1,000,000:    1s.  Last read position: chr12:120,438,388
INFO	2026-06-08 08:50:38	MarkDuplicates	Tracking 618560 as yet unmatched pairs. 16368 records in RAM.
INFO	2026-06-08 08:50:39	MarkDuplicates	Read   406,000,000 records.  Elapsed time: 00:12:29s.  Time for last 1,000,000:    1s.  Last read position: chr12:122,135,584
INFO	2026-06-08 08:50:39	MarkDuplicates	Tracking 613129 as yet unmatched pairs. 10926 records in RAM.
INFO	2026-06-08 08:50:41	MarkDuplicates	Read   407,000,000 records.  Elapsed time: 00:12:31s.  Time for last 1,000,000:    1s.  Last read position: chr12:123,586,902
INFO	2026-06-08 08:50:41	MarkDuplicates	Tracking 614281 as yet unmatched pairs. 12059 records in RAM.
INFO	2026-06-08 08:50:42	MarkDuplicates	Read   408,000,000 records.  Elapsed time: 00:12:32s.  Time for last 1,000,000:    1s.  Last read position: chr12:124,912,568
INFO	2026-06-08 08:50:42	MarkDuplicates	Tracking 607791 as yet unmatched pairs. 5557 records in RAM.
INFO	2026-06-08 08:50:44	MarkDuplicates	Read   409,000,000 records.  Elapsed time: 00:12:34s.  Time for last 1,000,000:    1s.  Last read position: chr12:132,642,331
INFO	2026-06-08 08:50:44	MarkDuplicates	Tracking 604761 as yet unmatched pairs. 2522 records in RAM.
INFO	2026-06-08 08:50:45	MarkDuplicates	Read   410,000,000 records.  Elapsed time: 00:12:35s.  Time for last 1,000,000:    1s.  Last read position: chr13:20,002,956
INFO	2026-06-08 08:50:45	MarkDuplicates	Tracking 602599 as yet unmatched pairs. 20760 records in RAM.
INFO	2026-06-08 08:50:47	MarkDuplicates	Read   411,000,000 records.  Elapsed time: 00:12:37s.  Time for last 1,000,000:    1s.  Last read position: chr13:27,435,524
INFO	2026-06-08 08:50:47	MarkDuplicates	Tracking 599619 as yet unmatched pairs. 17774 records in RAM.
INFO	2026-06-08 08:50:48	MarkDuplicates	Read   412,000,000 records.  Elapsed time: 00:12:38s.  Time for last 1,000,000:    1s.  Last read position: chr13:37,564,537
INFO	2026-06-08 08:50:48	MarkDuplicates	Tracking 609570 as yet unmatched pairs. 27701 records in RAM.
INFO	2026-06-08 08:50:50	MarkDuplicates	Read   413,000,000 records.  Elapsed time: 00:12:40s.  Time for last 1,000,000:    1s.  Last read position: chr13:38,362,662
INFO	2026-06-08 08:50:50	MarkDuplicates	Tracking 594819 as yet unmatched pairs. 12943 records in RAM.
INFO	2026-06-08 08:50:51	MarkDuplicates	Read   414,000,000 records.  Elapsed time: 00:12:41s.  Time for last 1,000,000:    1s.  Last read position: chr13:45,985,588
INFO	2026-06-08 08:50:51	MarkDuplicates	Tracking 592549 as yet unmatched pairs. 10654 records in RAM.
INFO	2026-06-08 08:50:53	MarkDuplicates	Read   415,000,000 records.  Elapsed time: 00:12:43s.  Time for last 1,000,000:    1s.  Last read position: chr13:75,530,171
INFO	2026-06-08 08:50:53	MarkDuplicates	Tracking 590604 as yet unmatched pairs. 8702 records in RAM.
INFO	2026-06-08 08:50:54	MarkDuplicates	Read   416,000,000 records.  Elapsed time: 00:12:44s.  Time for last 1,000,000:    1s.  Last read position: chr13:98,922,051
INFO	2026-06-08 08:50:54	MarkDuplicates	Tracking 587599 as yet unmatched pairs. 5681 records in RAM.
INFO	2026-06-08 08:50:56	MarkDuplicates	Read   417,000,000 records.  Elapsed time: 00:12:46s.  Time for last 1,000,000:    1s.  Last read position: chr13:110,482,546
INFO	2026-06-08 08:50:56	MarkDuplicates	Tracking 585540 as yet unmatched pairs. 3601 records in RAM.
INFO	2026-06-08 08:50:58	MarkDuplicates	Read   418,000,000 records.  Elapsed time: 00:12:48s.  Time for last 1,000,000:    1s.  Last read position: chr14:20,389,712
INFO	2026-06-08 08:50:58	MarkDuplicates	Tracking 582051 as yet unmatched pairs. 49121 records in RAM.
INFO	2026-06-08 08:50:59	MarkDuplicates	Read   419,000,000 records.  Elapsed time: 00:12:49s.  Time for last 1,000,000:    1s.  Last read position: chr14:22,812,956
INFO	2026-06-08 08:50:59	MarkDuplicates	Tracking 579192 as yet unmatched pairs. 46245 records in RAM.
INFO	2026-06-08 08:51:01	MarkDuplicates	Read   420,000,000 records.  Elapsed time: 00:12:50s.  Time for last 1,000,000:    1s.  Last read position: chr14:23,560,322
INFO	2026-06-08 08:51:01	MarkDuplicates	Tracking 576721 as yet unmatched pairs. 43769 records in RAM.
INFO	2026-06-08 08:51:02	MarkDuplicates	Read   421,000,000 records.  Elapsed time: 00:12:52s.  Time for last 1,000,000:    1s.  Last read position: chr14:24,431,656
INFO	2026-06-08 08:51:02	MarkDuplicates	Tracking 573720 as yet unmatched pairs. 40767 records in RAM.
INFO	2026-06-08 08:51:04	MarkDuplicates	Read   422,000,000 records.  Elapsed time: 00:12:54s.  Time for last 1,000,000:    1s.  Last read position: chr14:35,402,002
INFO	2026-06-08 08:51:04	MarkDuplicates	Tracking 571916 as yet unmatched pairs. 38943 records in RAM.
INFO	2026-06-08 08:51:05	MarkDuplicates	Read   423,000,000 records.  Elapsed time: 00:12:55s.  Time for last 1,000,000:    1s.  Last read position: chr14:49,583,582
INFO	2026-06-08 08:51:05	MarkDuplicates	Tracking 572031 as yet unmatched pairs. 39039 records in RAM.
INFO	2026-06-08 08:51:07	MarkDuplicates	Read   424,000,000 records.  Elapsed time: 00:12:56s.  Time for last 1,000,000:    1s.  Last read position: chr14:52,042,190
INFO	2026-06-08 08:51:07	MarkDuplicates	Tracking 566496 as yet unmatched pairs. 33452 records in RAM.
INFO	2026-06-08 08:51:08	MarkDuplicates	Read   425,000,000 records.  Elapsed time: 00:12:58s.  Time for last 1,000,000:    1s.  Last read position: chr14:58,257,989
INFO	2026-06-08 08:51:08	MarkDuplicates	Tracking 563782 as yet unmatched pairs. 30712 records in RAM.
INFO	2026-06-08 08:51:09	MarkDuplicates	Read   426,000,000 records.  Elapsed time: 00:12:59s.  Time for last 1,000,000:    1s.  Last read position: chr14:64,454,727
INFO	2026-06-08 08:51:09	MarkDuplicates	Tracking 561118 as yet unmatched pairs. 28037 records in RAM.
INFO	2026-06-08 08:51:11	MarkDuplicates	Read   427,000,000 records.  Elapsed time: 00:13:01s.  Time for last 1,000,000:    1s.  Last read position: chr14:68,909,362
INFO	2026-06-08 08:51:11	MarkDuplicates	Tracking 560732 as yet unmatched pairs. 27636 records in RAM.
INFO	2026-06-08 08:51:13	MarkDuplicates	Read   428,000,000 records.  Elapsed time: 00:13:03s.  Time for last 1,000,000:    1s.  Last read position: chr14:73,277,180
INFO	2026-06-08 08:51:13	MarkDuplicates	Tracking 556068 as yet unmatched pairs. 22955 records in RAM.
INFO	2026-06-08 08:51:14	MarkDuplicates	Read   429,000,000 records.  Elapsed time: 00:13:04s.  Time for last 1,000,000:    1s.  Last read position: chr14:75,003,048
INFO	2026-06-08 08:51:14	MarkDuplicates	Tracking 552953 as yet unmatched pairs. 19832 records in RAM.
INFO	2026-06-08 08:51:15	MarkDuplicates	Read   430,000,000 records.  Elapsed time: 00:13:05s.  Time for last 1,000,000:    1s.  Last read position: chr14:88,426,591
INFO	2026-06-08 08:51:15	MarkDuplicates	Tracking 550251 as yet unmatched pairs. 17118 records in RAM.
INFO	2026-06-08 08:51:17	MarkDuplicates	Read   431,000,000 records.  Elapsed time: 00:13:07s.  Time for last 1,000,000:    1s.  Last read position: chr14:93,242,318
INFO	2026-06-08 08:51:17	MarkDuplicates	Tracking 547883 as yet unmatched pairs. 14742 records in RAM.
INFO	2026-06-08 08:51:19	MarkDuplicates	Read   432,000,000 records.  Elapsed time: 00:13:09s.  Time for last 1,000,000:    1s.  Last read position: chr14:100,135,912
INFO	2026-06-08 08:51:19	MarkDuplicates	Tracking 545893 as yet unmatched pairs. 12749 records in RAM.
INFO	2026-06-08 08:51:20	MarkDuplicates	Read   433,000,000 records.  Elapsed time: 00:13:10s.  Time for last 1,000,000:    1s.  Last read position: chr14:102,083,179
INFO	2026-06-08 08:51:20	MarkDuplicates	Tracking 543652 as yet unmatched pairs. 10489 records in RAM.
INFO	2026-06-08 08:51:21	MarkDuplicates	Read   434,000,000 records.  Elapsed time: 00:13:11s.  Time for last 1,000,000:    1s.  Last read position: chr14:103,742,044
INFO	2026-06-08 08:51:21	MarkDuplicates	Tracking 540282 as yet unmatched pairs. 7116 records in RAM.
INFO	2026-06-08 08:51:23	MarkDuplicates	Read   435,000,000 records.  Elapsed time: 00:13:13s.  Time for last 1,000,000:    1s.  Last read position: chr14:104,945,071
INFO	2026-06-08 08:51:23	MarkDuplicates	Tracking 538515 as yet unmatched pairs. 5336 records in RAM.
INFO	2026-06-08 08:51:25	MarkDuplicates	Read   436,000,000 records.  Elapsed time: 00:13:15s.  Time for last 1,000,000:    2s.  Last read position: chr14:105,469,261
INFO	2026-06-08 08:51:25	MarkDuplicates	Tracking 534081 as yet unmatched pairs. 898 records in RAM.
INFO	2026-06-08 08:51:27	MarkDuplicates	Read   437,000,000 records.  Elapsed time: 00:13:17s.  Time for last 1,000,000:    1s.  Last read position: chr15:28,651,423
INFO	2026-06-08 08:51:27	MarkDuplicates	Tracking 531704 as yet unmatched pairs. 38010 records in RAM.
INFO	2026-06-08 08:51:28	MarkDuplicates	Read   438,000,000 records.  Elapsed time: 00:13:18s.  Time for last 1,000,000:    1s.  Last read position: chr15:34,528,731
INFO	2026-06-08 08:51:28	MarkDuplicates	Tracking 529581 as yet unmatched pairs. 35865 records in RAM.
INFO	2026-06-08 08:51:30	MarkDuplicates	Read   439,000,000 records.  Elapsed time: 00:13:20s.  Time for last 1,000,000:    1s.  Last read position: chr15:40,652,023
INFO	2026-06-08 08:51:30	MarkDuplicates	Tracking 526927 as yet unmatched pairs. 33202 records in RAM.
INFO	2026-06-08 08:51:31	MarkDuplicates	Read   440,000,000 records.  Elapsed time: 00:13:21s.  Time for last 1,000,000:    1s.  Last read position: chr15:42,444,884
INFO	2026-06-08 08:51:31	MarkDuplicates	Tracking 524388 as yet unmatched pairs. 30650 records in RAM.
INFO	2026-06-08 08:51:33	MarkDuplicates	Read   441,000,000 records.  Elapsed time: 00:13:23s.  Time for last 1,000,000:    1s.  Last read position: chr15:43,793,754
INFO	2026-06-08 08:51:33	MarkDuplicates	Tracking 527717 as yet unmatched pairs. 33978 records in RAM.
INFO	2026-06-08 08:51:35	MarkDuplicates	Read   442,000,000 records.  Elapsed time: 00:13:25s.  Time for last 1,000,000:    2s.  Last read position: chr15:48,510,072
INFO	2026-06-08 08:51:35	MarkDuplicates	Tracking 519877 as yet unmatched pairs. 26128 records in RAM.
INFO	2026-06-08 08:51:37	MarkDuplicates	Read   443,000,000 records.  Elapsed time: 00:13:27s.  Time for last 1,000,000:    1s.  Last read position: chr15:56,087,394
INFO	2026-06-08 08:51:37	MarkDuplicates	Tracking 516736 as yet unmatched pairs. 22966 records in RAM.
INFO	2026-06-08 08:51:38	MarkDuplicates	Read   444,000,000 records.  Elapsed time: 00:13:28s.  Time for last 1,000,000:    1s.  Last read position: chr15:60,511,312
INFO	2026-06-08 08:51:38	MarkDuplicates	Tracking 514462 as yet unmatched pairs. 20679 records in RAM.
INFO	2026-06-08 08:51:40	MarkDuplicates	Read   445,000,000 records.  Elapsed time: 00:13:30s.  Time for last 1,000,000:    1s.  Last read position: chr15:64,180,388
INFO	2026-06-08 08:51:40	MarkDuplicates	Tracking 512022 as yet unmatched pairs. 18232 records in RAM.
INFO	2026-06-08 08:51:41	MarkDuplicates	Read   446,000,000 records.  Elapsed time: 00:13:31s.  Time for last 1,000,000:    1s.  Last read position: chr15:68,369,266
INFO	2026-06-08 08:51:41	MarkDuplicates	Tracking 509463 as yet unmatched pairs. 15658 records in RAM.
INFO	2026-06-08 08:51:43	MarkDuplicates	Read   447,000,000 records.  Elapsed time: 00:13:33s.  Time for last 1,000,000:    1s.  Last read position: chr15:72,570,190
INFO	2026-06-08 08:51:43	MarkDuplicates	Tracking 506918 as yet unmatched pairs. 13107 records in RAM.
INFO	2026-06-08 08:51:44	MarkDuplicates	Read   448,000,000 records.  Elapsed time: 00:13:34s.  Time for last 1,000,000:    1s.  Last read position: chr15:75,208,720
INFO	2026-06-08 08:51:44	MarkDuplicates	Tracking 503907 as yet unmatched pairs. 10087 records in RAM.
INFO	2026-06-08 08:51:46	MarkDuplicates	Read   449,000,000 records.  Elapsed time: 00:13:36s.  Time for last 1,000,000:    1s.  Last read position: chr15:80,121,717
INFO	2026-06-08 08:51:46	MarkDuplicates	Tracking 501850 as yet unmatched pairs. 8019 records in RAM.
INFO	2026-06-08 08:51:47	MarkDuplicates	Read   450,000,000 records.  Elapsed time: 00:13:37s.  Time for last 1,000,000:    1s.  Last read position: chr15:87,074,034
INFO	2026-06-08 08:51:47	MarkDuplicates	Tracking 498771 as yet unmatched pairs. 4928 records in RAM.
INFO	2026-06-08 08:51:49	MarkDuplicates	Read   451,000,000 records.  Elapsed time: 00:13:39s.  Time for last 1,000,000:    1s.  Last read position: chr15:90,815,206
INFO	2026-06-08 08:51:49	MarkDuplicates	Tracking 495939 as yet unmatched pairs. 2078 records in RAM.
INFO	2026-06-08 08:51:51	MarkDuplicates	Read   452,000,000 records.  Elapsed time: 00:13:41s.  Time for last 1,000,000:    1s.  Last read position: chr16:234,815
INFO	2026-06-08 08:51:51	MarkDuplicates	Tracking 493242 as yet unmatched pairs. 67917 records in RAM.
INFO	2026-06-08 08:51:53	MarkDuplicates	Read   453,000,000 records.  Elapsed time: 00:13:42s.  Time for last 1,000,000:    1s.  Last read position: chr16:764,951
INFO	2026-06-08 08:51:53	MarkDuplicates	Tracking 491218 as yet unmatched pairs. 65887 records in RAM.
INFO	2026-06-08 08:51:54	MarkDuplicates	Read   454,000,000 records.  Elapsed time: 00:13:44s.  Time for last 1,000,000:    1s.  Last read position: chr16:1,770,906
INFO	2026-06-08 08:51:54	MarkDuplicates	Tracking 487253 as yet unmatched pairs. 61916 records in RAM.
INFO	2026-06-08 08:51:56	MarkDuplicates	Read   455,000,000 records.  Elapsed time: 00:13:46s.  Time for last 1,000,000:    1s.  Last read position: chr16:2,114,768
INFO	2026-06-08 08:51:56	MarkDuplicates	Tracking 483395 as yet unmatched pairs. 58053 records in RAM.
INFO	2026-06-08 08:51:57	MarkDuplicates	Read   456,000,000 records.  Elapsed time: 00:13:47s.  Time for last 1,000,000:    1s.  Last read position: chr16:2,762,519
INFO	2026-06-08 08:51:57	MarkDuplicates	Tracking 481165 as yet unmatched pairs. 55814 records in RAM.
INFO	2026-06-08 08:51:59	MarkDuplicates	Read   457,000,000 records.  Elapsed time: 00:13:49s.  Time for last 1,000,000:    1s.  Last read position: chr16:2,855,703
INFO	2026-06-08 08:51:59	MarkDuplicates	Tracking 478219 as yet unmatched pairs. 52863 records in RAM.
INFO	2026-06-08 08:52:00	MarkDuplicates	Read   458,000,000 records.  Elapsed time: 00:13:50s.  Time for last 1,000,000:    1s.  Last read position: chr16:4,335,169
INFO	2026-06-08 08:52:00	MarkDuplicates	Tracking 475263 as yet unmatched pairs. 49895 records in RAM.
INFO	2026-06-08 08:52:02	MarkDuplicates	Read   459,000,000 records.  Elapsed time: 00:13:52s.  Time for last 1,000,000:    1s.  Last read position: chr16:11,549,508
INFO	2026-06-08 08:52:02	MarkDuplicates	Tracking 472724 as yet unmatched pairs. 47347 records in RAM.
INFO	2026-06-08 08:52:04	MarkDuplicates	Read   460,000,000 records.  Elapsed time: 00:13:54s.  Time for last 1,000,000:    1s.  Last read position: chr16:14,875,245
INFO	2026-06-08 08:52:04	MarkDuplicates	Tracking 470835 as yet unmatched pairs. 45445 records in RAM.
INFO	2026-06-08 08:52:05	MarkDuplicates	Read   461,000,000 records.  Elapsed time: 00:13:55s.  Time for last 1,000,000:    1s.  Last read position: chr16:15,363,746
INFO	2026-06-08 08:52:05	MarkDuplicates	Tracking 468956 as yet unmatched pairs. 43558 records in RAM.
INFO	2026-06-08 08:52:06	MarkDuplicates	Read   462,000,000 records.  Elapsed time: 00:13:56s.  Time for last 1,000,000:    1s.  Last read position: chr16:16,350,090
INFO	2026-06-08 08:52:06	MarkDuplicates	Tracking 469118 as yet unmatched pairs. 43720 records in RAM.
INFO	2026-06-08 08:52:07	MarkDuplicates	Read   463,000,000 records.  Elapsed time: 00:13:57s.  Time for last 1,000,000:    1s.  Last read position: chr16:18,358,360
INFO	2026-06-08 08:52:07	MarkDuplicates	Tracking 467763 as yet unmatched pairs. 42365 records in RAM.
INFO	2026-06-08 08:52:09	MarkDuplicates	Read   464,000,000 records.  Elapsed time: 00:13:59s.  Time for last 1,000,000:    1s.  Last read position: chr16:18,868,337
INFO	2026-06-08 08:52:09	MarkDuplicates	Tracking 465478 as yet unmatched pairs. 40077 records in RAM.
INFO	2026-06-08 08:52:10	MarkDuplicates	Read   465,000,000 records.  Elapsed time: 00:14:00s.  Time for last 1,000,000:    1s.  Last read position: chr16:21,404,998
INFO	2026-06-08 08:52:10	MarkDuplicates	Tracking 463596 as yet unmatched pairs. 38193 records in RAM.
INFO	2026-06-08 08:52:11	MarkDuplicates	Read   466,000,000 records.  Elapsed time: 00:14:01s.  Time for last 1,000,000:    1s.  Last read position: chr16:21,837,158
INFO	2026-06-08 08:52:11	MarkDuplicates	Tracking 462235 as yet unmatched pairs. 36825 records in RAM.
INFO	2026-06-08 08:52:12	MarkDuplicates	Read   467,000,000 records.  Elapsed time: 00:14:02s.  Time for last 1,000,000:    1s.  Last read position: chr16:22,513,676
INFO	2026-06-08 08:52:12	MarkDuplicates	Tracking 461488 as yet unmatched pairs. 36067 records in RAM.
INFO	2026-06-08 08:52:14	MarkDuplicates	Read   468,000,000 records.  Elapsed time: 00:14:04s.  Time for last 1,000,000:    1s.  Last read position: chr16:22,540,813
INFO	2026-06-08 08:52:14	MarkDuplicates	Tracking 460633 as yet unmatched pairs. 35210 records in RAM.
INFO	2026-06-08 08:52:15	MarkDuplicates	Read   469,000,000 records.  Elapsed time: 00:14:05s.  Time for last 1,000,000:    1s.  Last read position: chr16:28,400,461
INFO	2026-06-08 08:52:15	MarkDuplicates	Tracking 459238 as yet unmatched pairs. 33811 records in RAM.
INFO	2026-06-08 08:52:16	MarkDuplicates	Read   470,000,000 records.  Elapsed time: 00:14:06s.  Time for last 1,000,000:    1s.  Last read position: chr16:29,382,296
INFO	2026-06-08 08:52:16	MarkDuplicates	Tracking 456436 as yet unmatched pairs. 31002 records in RAM.
INFO	2026-06-08 08:52:17	MarkDuplicates	Read   471,000,000 records.  Elapsed time: 00:14:07s.  Time for last 1,000,000:    1s.  Last read position: chr16:29,796,964
INFO	2026-06-08 08:52:17	MarkDuplicates	Tracking 456063 as yet unmatched pairs. 30626 records in RAM.
INFO	2026-06-08 08:52:19	MarkDuplicates	Read   472,000,000 records.  Elapsed time: 00:14:09s.  Time for last 1,000,000:    1s.  Last read position: chr16:30,092,680
INFO	2026-06-08 08:52:19	MarkDuplicates	Tracking 452882 as yet unmatched pairs. 27444 records in RAM.
INFO	2026-06-08 08:52:21	MarkDuplicates	Read   473,000,000 records.  Elapsed time: 00:14:11s.  Time for last 1,000,000:    1s.  Last read position: chr16:30,583,111
INFO	2026-06-08 08:52:21	MarkDuplicates	Tracking 451531 as yet unmatched pairs. 26087 records in RAM.
INFO	2026-06-08 08:52:22	MarkDuplicates	Read   474,000,000 records.  Elapsed time: 00:14:12s.  Time for last 1,000,000:    1s.  Last read position: chr16:31,180,166
INFO	2026-06-08 08:52:22	MarkDuplicates	Tracking 452889 as yet unmatched pairs. 27432 records in RAM.
INFO	2026-06-08 08:52:24	MarkDuplicates	Read   475,000,000 records.  Elapsed time: 00:14:14s.  Time for last 1,000,000:    1s.  Last read position: chr16:46,967,562
INFO	2026-06-08 08:52:24	MarkDuplicates	Tracking 446264 as yet unmatched pairs. 20805 records in RAM.
INFO	2026-06-08 08:52:25	MarkDuplicates	Read   476,000,000 records.  Elapsed time: 00:14:15s.  Time for last 1,000,000:    1s.  Last read position: chr16:55,491,807
INFO	2026-06-08 08:52:25	MarkDuplicates	Tracking 443935 as yet unmatched pairs. 18464 records in RAM.
INFO	2026-06-08 08:52:27	MarkDuplicates	Read   477,000,000 records.  Elapsed time: 00:14:17s.  Time for last 1,000,000:    1s.  Last read position: chr16:64,998,571
INFO	2026-06-08 08:52:27	MarkDuplicates	Tracking 442669 as yet unmatched pairs. 17193 records in RAM.
INFO	2026-06-08 08:52:28	MarkDuplicates	Read   478,000,000 records.  Elapsed time: 00:14:18s.  Time for last 1,000,000:    1s.  Last read position: chr16:68,275,030
INFO	2026-06-08 08:52:28	MarkDuplicates	Tracking 438208 as yet unmatched pairs. 12721 records in RAM.
INFO	2026-06-08 08:52:30	MarkDuplicates	Read   479,000,000 records.  Elapsed time: 00:14:20s.  Time for last 1,000,000:    1s.  Last read position: chr16:70,970,620
INFO	2026-06-08 08:52:30	MarkDuplicates	Tracking 435191 as yet unmatched pairs. 9686 records in RAM.
INFO	2026-06-08 08:52:31	MarkDuplicates	Read   480,000,000 records.  Elapsed time: 00:14:21s.  Time for last 1,000,000:    1s.  Last read position: chr16:82,148,745
INFO	2026-06-08 08:52:31	MarkDuplicates	Tracking 432703 as yet unmatched pairs. 7181 records in RAM.
INFO	2026-06-08 08:52:33	MarkDuplicates	Read   481,000,000 records.  Elapsed time: 00:14:23s.  Time for last 1,000,000:    1s.  Last read position: chr16:88,433,893
INFO	2026-06-08 08:52:33	MarkDuplicates	Tracking 430040 as yet unmatched pairs. 4500 records in RAM.
INFO	2026-06-08 08:52:34	MarkDuplicates	Read   482,000,000 records.  Elapsed time: 00:14:24s.  Time for last 1,000,000:    1s.  Last read position: chr16:89,561,725
INFO	2026-06-08 08:52:34	MarkDuplicates	Tracking 429535 as yet unmatched pairs. 3986 records in RAM.
INFO	2026-06-08 08:52:37	MarkDuplicates	Read   483,000,000 records.  Elapsed time: 00:14:27s.  Time for last 1,000,000:    2s.  Last read position: chr17:1,471,945
INFO	2026-06-08 08:52:37	MarkDuplicates	Tracking 424686 as yet unmatched pairs. 177843 records in RAM.
INFO	2026-06-08 08:52:39	MarkDuplicates	Read   484,000,000 records.  Elapsed time: 00:14:29s.  Time for last 1,000,000:    1s.  Last read position: chr17:3,885,391
INFO	2026-06-08 08:52:39	MarkDuplicates	Tracking 421249 as yet unmatched pairs. 174405 records in RAM.
INFO	2026-06-08 08:52:41	MarkDuplicates	Read   485,000,000 records.  Elapsed time: 00:14:31s.  Time for last 1,000,000:    1s.  Last read position: chr17:6,628,322
INFO	2026-06-08 08:52:41	MarkDuplicates	Tracking 418531 as yet unmatched pairs. 171680 records in RAM.
INFO	2026-06-08 08:52:43	MarkDuplicates	Read   486,000,000 records.  Elapsed time: 00:14:33s.  Time for last 1,000,000:    1s.  Last read position: chr17:7,513,962
INFO	2026-06-08 08:52:43	MarkDuplicates	Tracking 416810 as yet unmatched pairs. 169955 records in RAM.
INFO	2026-06-08 08:52:45	MarkDuplicates	Read   487,000,000 records.  Elapsed time: 00:14:35s.  Time for last 1,000,000:    1s.  Last read position: chr17:8,521,165
INFO	2026-06-08 08:52:45	MarkDuplicates	Tracking 413683 as yet unmatched pairs. 166825 records in RAM.
INFO	2026-06-08 08:52:46	MarkDuplicates	Read   488,000,000 records.  Elapsed time: 00:14:36s.  Time for last 1,000,000:    1s.  Last read position: chr17:17,175,301
INFO	2026-06-08 08:52:46	MarkDuplicates	Tracking 410956 as yet unmatched pairs. 164093 records in RAM.
INFO	2026-06-08 08:52:48	MarkDuplicates	Read   489,000,000 records.  Elapsed time: 00:14:38s.  Time for last 1,000,000:    1s.  Last read position: chr17:18,671,495
INFO	2026-06-08 08:52:48	MarkDuplicates	Tracking 407885 as yet unmatched pairs. 161014 records in RAM.
INFO	2026-06-08 08:52:49	MarkDuplicates	Read   490,000,000 records.  Elapsed time: 00:14:39s.  Time for last 1,000,000:    1s.  Last read position: chr17:27,752,858
INFO	2026-06-08 08:52:49	MarkDuplicates	Tracking 405342 as yet unmatched pairs. 158466 records in RAM.
INFO	2026-06-08 08:52:51	MarkDuplicates	Read   491,000,000 records.  Elapsed time: 00:14:41s.  Time for last 1,000,000:    1s.  Last read position: chr17:29,264,557
INFO	2026-06-08 08:52:51	MarkDuplicates	Tracking 403285 as yet unmatched pairs. 156404 records in RAM.
INFO	2026-06-08 08:52:52	MarkDuplicates	Read   492,000,000 records.  Elapsed time: 00:14:42s.  Time for last 1,000,000:    1s.  Last read position: chr17:31,940,310
INFO	2026-06-08 08:52:52	MarkDuplicates	Tracking 401948 as yet unmatched pairs. 155066 records in RAM.
INFO	2026-06-08 08:52:54	MarkDuplicates	Read   493,000,000 records.  Elapsed time: 00:14:44s.  Time for last 1,000,000:    1s.  Last read position: chr17:35,844,280
INFO	2026-06-08 08:52:54	MarkDuplicates	Tracking 398115 as yet unmatched pairs. 151229 records in RAM.
INFO	2026-06-08 08:52:55	MarkDuplicates	Read   494,000,000 records.  Elapsed time: 00:14:45s.  Time for last 1,000,000:    1s.  Last read position: chr17:38,138,560
INFO	2026-06-08 08:52:55	MarkDuplicates	Tracking 396132 as yet unmatched pairs. 149238 records in RAM.
INFO	2026-06-08 08:52:57	MarkDuplicates	Read   495,000,000 records.  Elapsed time: 00:14:47s.  Time for last 1,000,000:    1s.  Last read position: chr17:39,261,494
INFO	2026-06-08 08:52:57	MarkDuplicates	Tracking 393631 as yet unmatched pairs. 146735 records in RAM.
INFO	2026-06-08 08:52:58	MarkDuplicates	Read   496,000,000 records.  Elapsed time: 00:14:48s.  Time for last 1,000,000:    1s.  Last read position: chr17:39,716,388
INFO	2026-06-08 08:52:58	MarkDuplicates	Tracking 397130 as yet unmatched pairs. 150228 records in RAM.
INFO	2026-06-08 08:53:00	MarkDuplicates	Read   497,000,000 records.  Elapsed time: 00:14:50s.  Time for last 1,000,000:    1s.  Last read position: chr17:40,164,115
INFO	2026-06-08 08:53:00	MarkDuplicates	Tracking 388190 as yet unmatched pairs. 141279 records in RAM.
INFO	2026-06-08 08:53:01	MarkDuplicates	Read   498,000,000 records.  Elapsed time: 00:14:51s.  Time for last 1,000,000:    1s.  Last read position: chr17:41,524,854
INFO	2026-06-08 08:53:01	MarkDuplicates	Tracking 392596 as yet unmatched pairs. 145679 records in RAM.
INFO	2026-06-08 08:53:03	MarkDuplicates	Read   499,000,000 records.  Elapsed time: 00:14:53s.  Time for last 1,000,000:    1s.  Last read position: chr17:42,114,032
INFO	2026-06-08 08:53:03	MarkDuplicates	Tracking 383614 as yet unmatched pairs. 136693 records in RAM.
INFO	2026-06-08 08:53:04	MarkDuplicates	Read   500,000,000 records.  Elapsed time: 00:14:54s.  Time for last 1,000,000:    1s.  Last read position: chr17:42,782,799
INFO	2026-06-08 08:53:04	MarkDuplicates	Tracking 379304 as yet unmatched pairs. 132378 records in RAM.
INFO	2026-06-08 08:53:06	MarkDuplicates	Read   501,000,000 records.  Elapsed time: 00:14:56s.  Time for last 1,000,000:    1s.  Last read position: chr17:44,349,267
INFO	2026-06-08 08:53:06	MarkDuplicates	Tracking 377503 as yet unmatched pairs. 130572 records in RAM.
INFO	2026-06-08 08:55:16	MarkDuplicates	Read   502,000,000 records.  Elapsed time: 00:17:06s.  Time for last 1,000,000:  130s.  Last read position: chr17:46,082,270
INFO	2026-06-08 08:55:16	MarkDuplicates	Tracking 373941 as yet unmatched pairs. 127007 records in RAM.
INFO	2026-06-08 08:55:18	MarkDuplicates	Read   503,000,000 records.  Elapsed time: 00:17:08s.  Time for last 1,000,000:    1s.  Last read position: chr17:48,921,266
INFO	2026-06-08 08:55:18	MarkDuplicates	Tracking 371961 as yet unmatched pairs. 125019 records in RAM.
INFO	2026-06-08 08:55:19	MarkDuplicates	Read   504,000,000 records.  Elapsed time: 00:17:09s.  Time for last 1,000,000:    1s.  Last read position: chr17:50,149,509
INFO	2026-06-08 08:55:19	MarkDuplicates	Tracking 369492 as yet unmatched pairs. 122543 records in RAM.
INFO	2026-06-08 08:55:21	MarkDuplicates	Read   505,000,000 records.  Elapsed time: 00:17:11s.  Time for last 1,000,000:    1s.  Last read position: chr17:50,185,855
INFO	2026-06-08 08:55:21	MarkDuplicates	Tracking 388604 as yet unmatched pairs. 141653 records in RAM.
INFO	2026-06-08 08:55:23	MarkDuplicates	Read   506,000,000 records.  Elapsed time: 00:17:12s.  Time for last 1,000,000:    1s.  Last read position: chr17:50,186,488
INFO	2026-06-08 08:55:23	MarkDuplicates	Tracking 377438 as yet unmatched pairs. 130486 records in RAM.
INFO	2026-06-08 08:55:24	MarkDuplicates	Read   507,000,000 records.  Elapsed time: 00:17:14s.  Time for last 1,000,000:    1s.  Last read position: chr17:50,186,912
INFO	2026-06-08 08:55:24	MarkDuplicates	Tracking 425700 as yet unmatched pairs. 178743 records in RAM.
INFO	2026-06-08 08:55:26	MarkDuplicates	Read   508,000,000 records.  Elapsed time: 00:17:16s.  Time for last 1,000,000:    1s.  Last read position: chr17:50,187,483
INFO	2026-06-08 08:55:26	MarkDuplicates	Tracking 450711 as yet unmatched pairs. 203754 records in RAM.
INFO	2026-06-08 08:55:28	MarkDuplicates	Read   509,000,000 records.  Elapsed time: 00:17:18s.  Time for last 1,000,000:    1s.  Last read position: chr17:50,187,951
INFO	2026-06-08 08:55:28	MarkDuplicates	Tracking 441050 as yet unmatched pairs. 194089 records in RAM.
INFO	2026-06-08 08:55:30	MarkDuplicates	Read   510,000,000 records.  Elapsed time: 00:17:20s.  Time for last 1,000,000:    2s.  Last read position: chr17:50,188,568
INFO	2026-06-08 08:55:30	MarkDuplicates	Tracking 419474 as yet unmatched pairs. 172513 records in RAM.
INFO	2026-06-08 08:55:32	MarkDuplicates	Read   511,000,000 records.  Elapsed time: 00:17:22s.  Time for last 1,000,000:    2s.  Last read position: chr17:50,188,928
INFO	2026-06-08 08:55:32	MarkDuplicates	Tracking 434637 as yet unmatched pairs. 187674 records in RAM.
INFO	2026-06-08 08:55:34	MarkDuplicates	Read   512,000,000 records.  Elapsed time: 00:17:24s.  Time for last 1,000,000:    2s.  Last read position: chr17:50,189,384
INFO	2026-06-08 08:55:34	MarkDuplicates	Tracking 390423 as yet unmatched pairs. 143457 records in RAM.
INFO	2026-06-08 08:55:36	MarkDuplicates	Read   513,000,000 records.  Elapsed time: 00:17:26s.  Time for last 1,000,000:    1s.  Last read position: chr17:50,189,518
INFO	2026-06-08 08:55:36	MarkDuplicates	Tracking 456426 as yet unmatched pairs. 209455 records in RAM.
INFO	2026-06-08 08:55:38	MarkDuplicates	Read   514,000,000 records.  Elapsed time: 00:17:28s.  Time for last 1,000,000:    1s.  Last read position: chr17:50,189,900
INFO	2026-06-08 08:55:38	MarkDuplicates	Tracking 425063 as yet unmatched pairs. 178088 records in RAM.
INFO	2026-06-08 08:55:39	MarkDuplicates	Read   515,000,000 records.  Elapsed time: 00:17:29s.  Time for last 1,000,000:    1s.  Last read position: chr17:50,190,327
INFO	2026-06-08 08:55:39	MarkDuplicates	Tracking 478905 as yet unmatched pairs. 231930 records in RAM.
INFO	2026-06-08 08:55:41	MarkDuplicates	Read   516,000,000 records.  Elapsed time: 00:17:31s.  Time for last 1,000,000:    2s.  Last read position: chr17:50,190,886
INFO	2026-06-08 08:55:41	MarkDuplicates	Tracking 408834 as yet unmatched pairs. 161845 records in RAM.
INFO	2026-06-08 08:55:43	MarkDuplicates	Read   517,000,000 records.  Elapsed time: 00:17:33s.  Time for last 1,000,000:    1s.  Last read position: chr17:50,191,856
INFO	2026-06-08 08:55:43	MarkDuplicates	Tracking 395560 as yet unmatched pairs. 148570 records in RAM.
INFO	2026-06-08 08:55:44	MarkDuplicates	Read   518,000,000 records.  Elapsed time: 00:17:34s.  Time for last 1,000,000:    1s.  Last read position: chr17:50,192,676
INFO	2026-06-08 08:55:44	MarkDuplicates	Tracking 417803 as yet unmatched pairs. 170807 records in RAM.
INFO	2026-06-08 08:55:46	MarkDuplicates	Read   519,000,000 records.  Elapsed time: 00:17:36s.  Time for last 1,000,000:    1s.  Last read position: chr17:50,193,940
INFO	2026-06-08 08:55:46	MarkDuplicates	Tracking 414783 as yet unmatched pairs. 167777 records in RAM.
INFO	2026-06-08 08:55:48	MarkDuplicates	Read   520,000,000 records.  Elapsed time: 00:17:38s.  Time for last 1,000,000:    1s.  Last read position: chr17:50,194,129
INFO	2026-06-08 08:55:48	MarkDuplicates	Tracking 453548 as yet unmatched pairs. 206534 records in RAM.
INFO	2026-06-08 08:55:49	MarkDuplicates	Read   521,000,000 records.  Elapsed time: 00:17:39s.  Time for last 1,000,000:    1s.  Last read position: chr17:50,194,390
INFO	2026-06-08 08:55:49	MarkDuplicates	Tracking 441843 as yet unmatched pairs. 194825 records in RAM.
INFO	2026-06-08 08:55:51	MarkDuplicates	Read   522,000,000 records.  Elapsed time: 00:17:41s.  Time for last 1,000,000:    1s.  Last read position: chr17:50,194,742
INFO	2026-06-08 08:55:51	MarkDuplicates	Tracking 417887 as yet unmatched pairs. 170869 records in RAM.
INFO	2026-06-08 08:55:53	MarkDuplicates	Read   523,000,000 records.  Elapsed time: 00:17:43s.  Time for last 1,000,000:    1s.  Last read position: chr17:50,195,249
INFO	2026-06-08 08:55:53	MarkDuplicates	Tracking 412473 as yet unmatched pairs. 165442 records in RAM.
INFO	2026-06-08 08:55:54	MarkDuplicates	Read   524,000,000 records.  Elapsed time: 00:17:44s.  Time for last 1,000,000:    1s.  Last read position: chr17:50,195,595
INFO	2026-06-08 08:55:54	MarkDuplicates	Tracking 417140 as yet unmatched pairs. 170107 records in RAM.
INFO	2026-06-08 08:55:56	MarkDuplicates	Read   525,000,000 records.  Elapsed time: 00:17:46s.  Time for last 1,000,000:    1s.  Last read position: chr17:50,196,177
INFO	2026-06-08 08:55:56	MarkDuplicates	Tracking 365187 as yet unmatched pairs. 118154 records in RAM.
INFO	2026-06-08 08:55:58	MarkDuplicates	Read   526,000,000 records.  Elapsed time: 00:17:48s.  Time for last 1,000,000:    1s.  Last read position: chr17:50,196,326
INFO	2026-06-08 08:55:58	MarkDuplicates	Tracking 472854 as yet unmatched pairs. 225818 records in RAM.
INFO	2026-06-08 08:56:00	MarkDuplicates	Read   527,000,000 records.  Elapsed time: 00:17:50s.  Time for last 1,000,000:    2s.  Last read position: chr17:50,196,647
INFO	2026-06-08 08:56:00	MarkDuplicates	Tracking 436717 as yet unmatched pairs. 189673 records in RAM.
INFO	2026-06-08 08:56:02	MarkDuplicates	Read   528,000,000 records.  Elapsed time: 00:17:52s.  Time for last 1,000,000:    2s.  Last read position: chr17:50,197,230
INFO	2026-06-08 08:56:02	MarkDuplicates	Tracking 398102 as yet unmatched pairs. 151057 records in RAM.
INFO	2026-06-08 08:56:05	MarkDuplicates	Read   529,000,000 records.  Elapsed time: 00:17:55s.  Time for last 1,000,000:    2s.  Last read position: chr17:50,198,176
INFO	2026-06-08 08:56:05	MarkDuplicates	Tracking 340312 as yet unmatched pairs. 93267 records in RAM.
INFO	2026-06-08 08:56:07	MarkDuplicates	Read   530,000,000 records.  Elapsed time: 00:17:57s.  Time for last 1,000,000:    1s.  Last read position: chr17:50,199,269
INFO	2026-06-08 08:56:07	MarkDuplicates	Tracking 355115 as yet unmatched pairs. 108065 records in RAM.
INFO	2026-06-08 08:56:08	MarkDuplicates	Read   531,000,000 records.  Elapsed time: 00:17:58s.  Time for last 1,000,000:    1s.  Last read position: chr17:50,199,753
INFO	2026-06-08 08:56:08	MarkDuplicates	Tracking 334445 as yet unmatched pairs. 87395 records in RAM.
INFO	2026-06-08 08:56:10	MarkDuplicates	Read   532,000,000 records.  Elapsed time: 00:18:00s.  Time for last 1,000,000:    1s.  Last read position: chr17:50,201,437
INFO	2026-06-08 08:56:10	MarkDuplicates	Tracking 311904 as yet unmatched pairs. 64840 records in RAM.
INFO	2026-06-08 08:56:11	MarkDuplicates	Read   533,000,000 records.  Elapsed time: 00:18:01s.  Time for last 1,000,000:    1s.  Last read position: chr17:50,750,828
INFO	2026-06-08 08:56:11	MarkDuplicates	Tracking 284320 as yet unmatched pairs. 37233 records in RAM.
INFO	2026-06-08 08:56:13	MarkDuplicates	Read   534,000,000 records.  Elapsed time: 00:18:03s.  Time for last 1,000,000:    1s.  Last read position: chr17:57,105,545
INFO	2026-06-08 08:56:13	MarkDuplicates	Tracking 282178 as yet unmatched pairs. 35091 records in RAM.
INFO	2026-06-08 08:56:14	MarkDuplicates	Read   535,000,000 records.  Elapsed time: 00:18:04s.  Time for last 1,000,000:    1s.  Last read position: chr17:59,620,127
INFO	2026-06-08 08:56:14	MarkDuplicates	Tracking 282393 as yet unmatched pairs. 35302 records in RAM.
INFO	2026-06-08 08:56:16	MarkDuplicates	Read   536,000,000 records.  Elapsed time: 00:18:06s.  Time for last 1,000,000:    1s.  Last read position: chr17:59,681,370
INFO	2026-06-08 08:56:16	MarkDuplicates	Tracking 280999 as yet unmatched pairs. 33907 records in RAM.
INFO	2026-06-08 08:56:17	MarkDuplicates	Read   537,000,000 records.  Elapsed time: 00:18:07s.  Time for last 1,000,000:    1s.  Last read position: chr17:60,910,656
INFO	2026-06-08 08:56:17	MarkDuplicates	Tracking 272951 as yet unmatched pairs. 25847 records in RAM.
INFO	2026-06-08 08:56:19	MarkDuplicates	Read   538,000,000 records.  Elapsed time: 00:18:09s.  Time for last 1,000,000:    1s.  Last read position: chr17:63,792,551
INFO	2026-06-08 08:56:19	MarkDuplicates	Tracking 270658 as yet unmatched pairs. 23552 records in RAM.
INFO	2026-06-08 08:56:20	MarkDuplicates	Read   539,000,000 records.  Elapsed time: 00:18:10s.  Time for last 1,000,000:    1s.  Last read position: chr17:64,504,278
INFO	2026-06-08 08:56:20	MarkDuplicates	Tracking 269277 as yet unmatched pairs. 22165 records in RAM.
INFO	2026-06-08 08:56:22	MarkDuplicates	Read   540,000,000 records.  Elapsed time: 00:18:11s.  Time for last 1,000,000:    1s.  Last read position: chr17:67,874,848
INFO	2026-06-08 08:56:22	MarkDuplicates	Tracking 265056 as yet unmatched pairs. 17941 records in RAM.
INFO	2026-06-08 08:56:23	MarkDuplicates	Read   541,000,000 records.  Elapsed time: 00:18:13s.  Time for last 1,000,000:    1s.  Last read position: chr17:75,213,119
INFO	2026-06-08 08:56:23	MarkDuplicates	Tracking 262583 as yet unmatched pairs. 15464 records in RAM.
INFO	2026-06-08 08:56:25	MarkDuplicates	Read   542,000,000 records.  Elapsed time: 00:18:15s.  Time for last 1,000,000:    1s.  Last read position: chr17:76,710,636
INFO	2026-06-08 08:56:25	MarkDuplicates	Tracking 259307 as yet unmatched pairs. 12178 records in RAM.
INFO	2026-06-08 08:56:27	MarkDuplicates	Read   543,000,000 records.  Elapsed time: 00:18:17s.  Time for last 1,000,000:    2s.  Last read position: chr17:80,110,735
INFO	2026-06-08 08:56:27	MarkDuplicates	Tracking 257165 as yet unmatched pairs. 10033 records in RAM.
INFO	2026-06-08 08:56:30	MarkDuplicates	Read   544,000,000 records.  Elapsed time: 00:18:20s.  Time for last 1,000,000:    2s.  Last read position: chr17:81,512,242
INFO	2026-06-08 08:56:30	MarkDuplicates	Tracking 255365 as yet unmatched pairs. 8223 records in RAM.
INFO	2026-06-08 08:56:31	MarkDuplicates	Read   545,000,000 records.  Elapsed time: 00:18:21s.  Time for last 1,000,000:    1s.  Last read position: chr17:82,081,667
INFO	2026-06-08 08:56:31	MarkDuplicates	Tracking 252676 as yet unmatched pairs. 5524 records in RAM.
INFO	2026-06-08 08:56:33	MarkDuplicates	Read   546,000,000 records.  Elapsed time: 00:18:23s.  Time for last 1,000,000:    1s.  Last read position: chr17:82,757,789
INFO	2026-06-08 08:56:33	MarkDuplicates	Tracking 247933 as yet unmatched pairs. 771 records in RAM.
INFO	2026-06-08 08:56:34	MarkDuplicates	Read   547,000,000 records.  Elapsed time: 00:18:24s.  Time for last 1,000,000:    1s.  Last read position: chr18:9,254,897
INFO	2026-06-08 08:56:34	MarkDuplicates	Tracking 245203 as yet unmatched pairs. 13376 records in RAM.
INFO	2026-06-08 08:56:36	MarkDuplicates	Read   548,000,000 records.  Elapsed time: 00:18:26s.  Time for last 1,000,000:    1s.  Last read position: chr18:21,574,250
INFO	2026-06-08 08:56:36	MarkDuplicates	Tracking 242748 as yet unmatched pairs. 10912 records in RAM.
INFO	2026-06-08 08:56:37	MarkDuplicates	Read   549,000,000 records.  Elapsed time: 00:18:27s.  Time for last 1,000,000:    1s.  Last read position: chr18:32,412,759
INFO	2026-06-08 08:56:37	MarkDuplicates	Tracking 240061 as yet unmatched pairs. 8222 records in RAM.
INFO	2026-06-08 08:56:38	MarkDuplicates	Read   550,000,000 records.  Elapsed time: 00:18:28s.  Time for last 1,000,000:    1s.  Last read position: chr18:49,490,477
INFO	2026-06-08 08:56:38	MarkDuplicates	Tracking 239121 as yet unmatched pairs. 7282 records in RAM.
INFO	2026-06-08 08:56:40	MarkDuplicates	Read   551,000,000 records.  Elapsed time: 00:18:30s.  Time for last 1,000,000:    1s.  Last read position: chr18:59,345,951
INFO	2026-06-08 08:56:40	MarkDuplicates	Tracking 235955 as yet unmatched pairs. 4106 records in RAM.
INFO	2026-06-08 08:56:41	MarkDuplicates	Read   552,000,000 records.  Elapsed time: 00:18:31s.  Time for last 1,000,000:    1s.  Last read position: chr18:79,717,905
INFO	2026-06-08 08:56:41	MarkDuplicates	Tracking 232326 as yet unmatched pairs. 471 records in RAM.
INFO	2026-06-08 08:56:44	MarkDuplicates	Read   553,000,000 records.  Elapsed time: 00:18:34s.  Time for last 1,000,000:    2s.  Last read position: chr19:1,116,034
INFO	2026-06-08 08:56:44	MarkDuplicates	Tracking 229246 as yet unmatched pairs. 91160 records in RAM.
INFO	2026-06-08 08:56:45	MarkDuplicates	Read   554,000,000 records.  Elapsed time: 00:18:35s.  Time for last 1,000,000:    1s.  Last read position: chr19:2,211,152
INFO	2026-06-08 08:56:45	MarkDuplicates	Tracking 225917 as yet unmatched pairs. 87831 records in RAM.
INFO	2026-06-08 08:56:47	MarkDuplicates	Read   555,000,000 records.  Elapsed time: 00:18:37s.  Time for last 1,000,000:    1s.  Last read position: chr19:4,362,329
INFO	2026-06-08 08:56:47	MarkDuplicates	Tracking 222735 as yet unmatched pairs. 84648 records in RAM.
INFO	2026-06-08 08:56:48	MarkDuplicates	Read   556,000,000 records.  Elapsed time: 00:18:38s.  Time for last 1,000,000:    1s.  Last read position: chr19:6,383,387
INFO	2026-06-08 08:56:48	MarkDuplicates	Tracking 219667 as yet unmatched pairs. 81579 records in RAM.
INFO	2026-06-08 08:56:50	MarkDuplicates	Read   557,000,000 records.  Elapsed time: 00:18:40s.  Time for last 1,000,000:    1s.  Last read position: chr19:7,870,713
INFO	2026-06-08 08:56:50	MarkDuplicates	Tracking 216940 as yet unmatched pairs. 78852 records in RAM.
INFO	2026-06-08 08:56:51	MarkDuplicates	Read   558,000,000 records.  Elapsed time: 00:18:41s.  Time for last 1,000,000:    1s.  Last read position: chr19:9,973,607
INFO	2026-06-08 08:56:51	MarkDuplicates	Tracking 214071 as yet unmatched pairs. 75983 records in RAM.
INFO	2026-06-08 08:56:52	MarkDuplicates	Read   559,000,000 records.  Elapsed time: 00:18:42s.  Time for last 1,000,000:    1s.  Last read position: chr19:10,637,905
INFO	2026-06-08 08:56:52	MarkDuplicates	Tracking 213099 as yet unmatched pairs. 75002 records in RAM.
INFO	2026-06-08 08:56:54	MarkDuplicates	Read   560,000,000 records.  Elapsed time: 00:18:44s.  Time for last 1,000,000:    1s.  Last read position: chr19:11,194,483
INFO	2026-06-08 08:56:54	MarkDuplicates	Tracking 208684 as yet unmatched pairs. 70581 records in RAM.
INFO	2026-06-08 08:56:56	MarkDuplicates	Read   561,000,000 records.  Elapsed time: 00:18:46s.  Time for last 1,000,000:    1s.  Last read position: chr19:12,745,418
INFO	2026-06-08 08:56:56	MarkDuplicates	Tracking 205673 as yet unmatched pairs. 67569 records in RAM.
INFO	2026-06-08 08:56:58	MarkDuplicates	Read   562,000,000 records.  Elapsed time: 00:18:48s.  Time for last 1,000,000:    2s.  Last read position: chr19:14,097,781
INFO	2026-06-08 08:56:58	MarkDuplicates	Tracking 203446 as yet unmatched pairs. 65342 records in RAM.
INFO	2026-06-08 08:57:00	MarkDuplicates	Read   563,000,000 records.  Elapsed time: 00:18:50s.  Time for last 1,000,000:    1s.  Last read position: chr19:15,186,927
INFO	2026-06-08 08:57:00	MarkDuplicates	Tracking 200322 as yet unmatched pairs. 62217 records in RAM.
INFO	2026-06-08 08:57:02	MarkDuplicates	Read   564,000,000 records.  Elapsed time: 00:18:52s.  Time for last 1,000,000:    1s.  Last read position: chr19:15,403,550
INFO	2026-06-08 08:57:02	MarkDuplicates	Tracking 197895 as yet unmatched pairs. 59789 records in RAM.
INFO	2026-06-08 08:57:03	MarkDuplicates	Read   565,000,000 records.  Elapsed time: 00:18:53s.  Time for last 1,000,000:    1s.  Last read position: chr19:17,235,539
INFO	2026-06-08 08:57:03	MarkDuplicates	Tracking 194087 as yet unmatched pairs. 55978 records in RAM.
INFO	2026-06-08 08:57:05	MarkDuplicates	Read   566,000,000 records.  Elapsed time: 00:18:55s.  Time for last 1,000,000:    1s.  Last read position: chr19:18,177,950
INFO	2026-06-08 08:57:05	MarkDuplicates	Tracking 190824 as yet unmatched pairs. 52711 records in RAM.
INFO	2026-06-08 08:57:06	MarkDuplicates	Read   567,000,000 records.  Elapsed time: 00:18:56s.  Time for last 1,000,000:    1s.  Last read position: chr19:19,009,875
INFO	2026-06-08 08:57:06	MarkDuplicates	Tracking 188590 as yet unmatched pairs. 50473 records in RAM.
INFO	2026-06-08 08:57:07	MarkDuplicates	Read   568,000,000 records.  Elapsed time: 00:18:57s.  Time for last 1,000,000:    1s.  Last read position: chr19:31,278,616
INFO	2026-06-08 08:57:07	MarkDuplicates	Tracking 185409 as yet unmatched pairs. 47288 records in RAM.
INFO	2026-06-08 08:57:09	MarkDuplicates	Read   569,000,000 records.  Elapsed time: 00:18:59s.  Time for last 1,000,000:    1s.  Last read position: chr19:35,262,570
INFO	2026-06-08 08:57:09	MarkDuplicates	Tracking 183411 as yet unmatched pairs. 45283 records in RAM.
INFO	2026-06-08 08:57:11	MarkDuplicates	Read   570,000,000 records.  Elapsed time: 00:19:00s.  Time for last 1,000,000:    1s.  Last read position: chr19:36,973,726
INFO	2026-06-08 08:57:11	MarkDuplicates	Tracking 179528 as yet unmatched pairs. 41399 records in RAM.
INFO	2026-06-08 08:57:12	MarkDuplicates	Read   571,000,000 records.  Elapsed time: 00:19:02s.  Time for last 1,000,000:    1s.  Last read position: chr19:38,905,500
INFO	2026-06-08 08:57:12	MarkDuplicates	Tracking 176967 as yet unmatched pairs. 38832 records in RAM.
INFO	2026-06-08 08:57:13	MarkDuplicates	Read   572,000,000 records.  Elapsed time: 00:19:03s.  Time for last 1,000,000:    1s.  Last read position: chr19:39,972,400
INFO	2026-06-08 08:57:13	MarkDuplicates	Tracking 174816 as yet unmatched pairs. 36674 records in RAM.
INFO	2026-06-08 08:57:15	MarkDuplicates	Read   573,000,000 records.  Elapsed time: 00:19:05s.  Time for last 1,000,000:    1s.  Last read position: chr19:41,276,175
INFO	2026-06-08 08:57:15	MarkDuplicates	Tracking 171998 as yet unmatched pairs. 33856 records in RAM.
INFO	2026-06-08 08:57:16	MarkDuplicates	Read   574,000,000 records.  Elapsed time: 00:19:06s.  Time for last 1,000,000:    1s.  Last read position: chr19:42,289,045
INFO	2026-06-08 08:57:16	MarkDuplicates	Tracking 169267 as yet unmatched pairs. 31125 records in RAM.
INFO	2026-06-08 08:57:18	MarkDuplicates	Read   575,000,000 records.  Elapsed time: 00:19:08s.  Time for last 1,000,000:    1s.  Last read position: chr19:44,820,918
INFO	2026-06-08 08:57:18	MarkDuplicates	Tracking 166108 as yet unmatched pairs. 27960 records in RAM.
INFO	2026-06-08 08:57:19	MarkDuplicates	Read   576,000,000 records.  Elapsed time: 00:19:09s.  Time for last 1,000,000:    1s.  Last read position: chr19:45,777,447
INFO	2026-06-08 08:57:19	MarkDuplicates	Tracking 163121 as yet unmatched pairs. 24971 records in RAM.
INFO	2026-06-08 08:57:21	MarkDuplicates	Read   577,000,000 records.  Elapsed time: 00:19:10s.  Time for last 1,000,000:    1s.  Last read position: chr19:47,679,964
INFO	2026-06-08 08:57:21	MarkDuplicates	Tracking 159732 as yet unmatched pairs. 21577 records in RAM.
INFO	2026-06-08 08:57:22	MarkDuplicates	Read   578,000,000 records.  Elapsed time: 00:19:12s.  Time for last 1,000,000:    1s.  Last read position: chr19:48,969,511
INFO	2026-06-08 08:57:22	MarkDuplicates	Tracking 156800 as yet unmatched pairs. 18645 records in RAM.
INFO	2026-06-08 08:57:24	MarkDuplicates	Read   579,000,000 records.  Elapsed time: 00:19:14s.  Time for last 1,000,000:    1s.  Last read position: chr19:49,635,523
INFO	2026-06-08 08:57:24	MarkDuplicates	Tracking 153846 as yet unmatched pairs. 15687 records in RAM.
INFO	2026-06-08 08:57:26	MarkDuplicates	Read   580,000,000 records.  Elapsed time: 00:19:16s.  Time for last 1,000,000:    2s.  Last read position: chr19:50,725,399
INFO	2026-06-08 08:57:26	MarkDuplicates	Tracking 150916 as yet unmatched pairs. 12755 records in RAM.
INFO	2026-06-08 08:57:28	MarkDuplicates	Read   581,000,000 records.  Elapsed time: 00:19:18s.  Time for last 1,000,000:    1s.  Last read position: chr19:53,402,082
INFO	2026-06-08 08:57:28	MarkDuplicates	Tracking 148690 as yet unmatched pairs. 10527 records in RAM.
INFO	2026-06-08 08:57:29	MarkDuplicates	Read   582,000,000 records.  Elapsed time: 00:19:19s.  Time for last 1,000,000:    1s.  Last read position: chr19:54,667,910
INFO	2026-06-08 08:57:29	MarkDuplicates	Tracking 146163 as yet unmatched pairs. 7998 records in RAM.
INFO	2026-06-08 08:57:31	MarkDuplicates	Read   583,000,000 records.  Elapsed time: 00:19:20s.  Time for last 1,000,000:    1s.  Last read position: chr19:56,087,958
INFO	2026-06-08 08:57:31	MarkDuplicates	Tracking 142740 as yet unmatched pairs. 4573 records in RAM.
INFO	2026-06-08 08:57:32	MarkDuplicates	Read   584,000,000 records.  Elapsed time: 00:19:22s.  Time for last 1,000,000:    1s.  Last read position: chr19:58,084,772
INFO	2026-06-08 08:57:32	MarkDuplicates	Tracking 140432 as yet unmatched pairs. 2264 records in RAM.
INFO	2026-06-08 08:57:34	MarkDuplicates	Read   585,000,000 records.  Elapsed time: 00:19:24s.  Time for last 1,000,000:    1s.  Last read position: chr20:1,369,890
INFO	2026-06-08 08:57:34	MarkDuplicates	Tracking 137957 as yet unmatched pairs. 34028 records in RAM.
INFO	2026-06-08 08:57:35	MarkDuplicates	Read   586,000,000 records.  Elapsed time: 00:19:25s.  Time for last 1,000,000:    1s.  Last read position: chr20:3,865,313
INFO	2026-06-08 08:57:35	MarkDuplicates	Tracking 134430 as yet unmatched pairs. 30500 records in RAM.
INFO	2026-06-08 08:57:37	MarkDuplicates	Read   587,000,000 records.  Elapsed time: 00:19:27s.  Time for last 1,000,000:    1s.  Last read position: chr20:18,316,133
INFO	2026-06-08 08:57:37	MarkDuplicates	Tracking 131955 as yet unmatched pairs. 28024 records in RAM.
INFO	2026-06-08 08:57:38	MarkDuplicates	Read   588,000,000 records.  Elapsed time: 00:19:28s.  Time for last 1,000,000:    1s.  Last read position: chr20:31,798,448
INFO	2026-06-08 08:57:38	MarkDuplicates	Tracking 129135 as yet unmatched pairs. 25203 records in RAM.
INFO	2026-06-08 08:57:40	MarkDuplicates	Read   589,000,000 records.  Elapsed time: 00:19:30s.  Time for last 1,000,000:    1s.  Last read position: chr20:35,003,501
INFO	2026-06-08 08:57:40	MarkDuplicates	Tracking 126712 as yet unmatched pairs. 22777 records in RAM.
INFO	2026-06-08 08:57:41	MarkDuplicates	Read   590,000,000 records.  Elapsed time: 00:19:31s.  Time for last 1,000,000:    1s.  Last read position: chr20:36,912,437
INFO	2026-06-08 08:57:41	MarkDuplicates	Tracking 123966 as yet unmatched pairs. 20025 records in RAM.
INFO	2026-06-08 08:57:42	MarkDuplicates	Read   591,000,000 records.  Elapsed time: 00:19:32s.  Time for last 1,000,000:    1s.  Last read position: chr20:43,458,030
INFO	2026-06-08 08:57:42	MarkDuplicates	Tracking 121057 as yet unmatched pairs. 17108 records in RAM.
INFO	2026-06-08 08:57:44	MarkDuplicates	Read   592,000,000 records.  Elapsed time: 00:19:34s.  Time for last 1,000,000:    1s.  Last read position: chr20:46,355,769
INFO	2026-06-08 08:57:44	MarkDuplicates	Tracking 118276 as yet unmatched pairs. 14325 records in RAM.
INFO	2026-06-08 08:57:46	MarkDuplicates	Read   593,000,000 records.  Elapsed time: 00:19:36s.  Time for last 1,000,000:    1s.  Last read position: chr20:49,248,615
INFO	2026-06-08 08:57:46	MarkDuplicates	Tracking 115877 as yet unmatched pairs. 11911 records in RAM.
INFO	2026-06-08 08:57:47	MarkDuplicates	Read   594,000,000 records.  Elapsed time: 00:19:37s.  Time for last 1,000,000:    1s.  Last read position: chr20:58,668,051
INFO	2026-06-08 08:57:47	MarkDuplicates	Tracking 113039 as yet unmatched pairs. 9073 records in RAM.
INFO	2026-06-08 08:57:48	MarkDuplicates	Read   595,000,000 records.  Elapsed time: 00:19:38s.  Time for last 1,000,000:    1s.  Last read position: chr20:62,315,146
INFO	2026-06-08 08:57:48	MarkDuplicates	Tracking 110162 as yet unmatched pairs. 6196 records in RAM.
INFO	2026-06-08 08:57:50	MarkDuplicates	Read   596,000,000 records.  Elapsed time: 00:19:40s.  Time for last 1,000,000:    1s.  Last read position: chr20:63,213,892
INFO	2026-06-08 08:57:50	MarkDuplicates	Tracking 106824 as yet unmatched pairs. 2858 records in RAM.
INFO	2026-06-08 08:57:51	MarkDuplicates	Read   597,000,000 records.  Elapsed time: 00:19:41s.  Time for last 1,000,000:    1s.  Last read position: chr21:6,487,386
INFO	2026-06-08 08:57:51	MarkDuplicates	Tracking 104166 as yet unmatched pairs. 21126 records in RAM.
INFO	2026-06-08 08:57:53	MarkDuplicates	Read   598,000,000 records.  Elapsed time: 00:19:43s.  Time for last 1,000,000:    1s.  Last read position: chr21:8,441,983
INFO	2026-06-08 08:57:53	MarkDuplicates	Tracking 102696 as yet unmatched pairs. 19651 records in RAM.
INFO	2026-06-08 08:57:55	MarkDuplicates	Read   599,000,000 records.  Elapsed time: 00:19:45s.  Time for last 1,000,000:    2s.  Last read position: chr21:31,666,466
INFO	2026-06-08 08:57:55	MarkDuplicates	Tracking 101065 as yet unmatched pairs. 18018 records in RAM.
INFO	2026-06-08 08:57:56	MarkDuplicates	Read   600,000,000 records.  Elapsed time: 00:19:46s.  Time for last 1,000,000:    1s.  Last read position: chr21:34,669,569
INFO	2026-06-08 08:57:56	MarkDuplicates	Tracking 97792 as yet unmatched pairs. 14726 records in RAM.
INFO	2026-06-08 08:57:58	MarkDuplicates	Read   601,000,000 records.  Elapsed time: 00:19:47s.  Time for last 1,000,000:    1s.  Last read position: chr21:37,225,492
INFO	2026-06-08 08:57:58	MarkDuplicates	Tracking 94670 as yet unmatched pairs. 11600 records in RAM.
INFO	2026-06-08 08:57:59	MarkDuplicates	Read   602,000,000 records.  Elapsed time: 00:19:49s.  Time for last 1,000,000:    1s.  Last read position: chr21:43,743,733
INFO	2026-06-08 08:57:59	MarkDuplicates	Tracking 92219 as yet unmatched pairs. 9149 records in RAM.
INFO	2026-06-08 08:58:01	MarkDuplicates	Read   603,000,000 records.  Elapsed time: 00:19:51s.  Time for last 1,000,000:    1s.  Last read position: chr21:45,509,493
INFO	2026-06-08 08:58:01	MarkDuplicates	Tracking 89177 as yet unmatched pairs. 6106 records in RAM.
INFO	2026-06-08 08:58:02	MarkDuplicates	Read   604,000,000 records.  Elapsed time: 00:19:52s.  Time for last 1,000,000:    1s.  Last read position: chr21:46,116,770
INFO	2026-06-08 08:58:02	MarkDuplicates	Tracking 87271 as yet unmatched pairs. 4200 records in RAM.
INFO	2026-06-08 08:58:04	MarkDuplicates	Read   605,000,000 records.  Elapsed time: 00:19:54s.  Time for last 1,000,000:    1s.  Last read position: chr22:17,734,236
INFO	2026-06-08 08:58:04	MarkDuplicates	Tracking 82787 as yet unmatched pairs. 37375 records in RAM.
INFO	2026-06-08 08:58:05	MarkDuplicates	Read   606,000,000 records.  Elapsed time: 00:19:55s.  Time for last 1,000,000:    1s.  Last read position: chr22:20,798,636
INFO	2026-06-08 08:58:05	MarkDuplicates	Tracking 80512 as yet unmatched pairs. 35099 records in RAM.
INFO	2026-06-08 08:58:07	MarkDuplicates	Read   607,000,000 records.  Elapsed time: 00:19:57s.  Time for last 1,000,000:    1s.  Last read position: chr22:23,622,093
INFO	2026-06-08 08:58:07	MarkDuplicates	Tracking 76753 as yet unmatched pairs. 31338 records in RAM.
INFO	2026-06-08 08:58:08	MarkDuplicates	Read   608,000,000 records.  Elapsed time: 00:19:58s.  Time for last 1,000,000:    1s.  Last read position: chr22:24,232,849
INFO	2026-06-08 08:58:08	MarkDuplicates	Tracking 73579 as yet unmatched pairs. 28162 records in RAM.
INFO	2026-06-08 08:58:10	MarkDuplicates	Read   609,000,000 records.  Elapsed time: 00:20:00s.  Time for last 1,000,000:    1s.  Last read position: chr22:28,797,089
INFO	2026-06-08 08:58:10	MarkDuplicates	Tracking 77364 as yet unmatched pairs. 31947 records in RAM.
INFO	2026-06-08 08:58:11	MarkDuplicates	Read   610,000,000 records.  Elapsed time: 00:20:01s.  Time for last 1,000,000:    1s.  Last read position: chr22:29,299,798
INFO	2026-06-08 08:58:11	MarkDuplicates	Tracking 68180 as yet unmatched pairs. 22758 records in RAM.
INFO	2026-06-08 08:58:13	MarkDuplicates	Read   611,000,000 records.  Elapsed time: 00:20:03s.  Time for last 1,000,000:    1s.  Last read position: chr22:31,619,808
INFO	2026-06-08 08:58:13	MarkDuplicates	Tracking 65217 as yet unmatched pairs. 19792 records in RAM.
INFO	2026-06-08 08:58:14	MarkDuplicates	Read   612,000,000 records.  Elapsed time: 00:20:04s.  Time for last 1,000,000:    1s.  Last read position: chr22:36,305,976
INFO	2026-06-08 08:58:14	MarkDuplicates	Tracking 63432 as yet unmatched pairs. 18005 records in RAM.
INFO	2026-06-08 08:58:16	MarkDuplicates	Read   613,000,000 records.  Elapsed time: 00:20:06s.  Time for last 1,000,000:    1s.  Last read position: chr22:38,247,816
INFO	2026-06-08 08:58:16	MarkDuplicates	Tracking 60297 as yet unmatched pairs. 14870 records in RAM.
INFO	2026-06-08 08:58:17	MarkDuplicates	Read   614,000,000 records.  Elapsed time: 00:20:07s.  Time for last 1,000,000:    1s.  Last read position: chr22:40,418,429
INFO	2026-06-08 08:58:17	MarkDuplicates	Tracking 56891 as yet unmatched pairs. 11464 records in RAM.
INFO	2026-06-08 08:58:18	MarkDuplicates	Read   615,000,000 records.  Elapsed time: 00:20:08s.  Time for last 1,000,000:    1s.  Last read position: chr22:41,893,166
INFO	2026-06-08 08:58:18	MarkDuplicates	Tracking 54467 as yet unmatched pairs. 9035 records in RAM.
INFO	2026-06-08 08:58:21	MarkDuplicates	Read   616,000,000 records.  Elapsed time: 00:20:10s.  Time for last 1,000,000:    2s.  Last read position: chr22:45,525,664
INFO	2026-06-08 08:58:21	MarkDuplicates	Tracking 51806 as yet unmatched pairs. 6373 records in RAM.
INFO	2026-06-08 08:58:22	MarkDuplicates	Read   617,000,000 records.  Elapsed time: 00:20:12s.  Time for last 1,000,000:    1s.  Last read position: chr22:50,280,751
INFO	2026-06-08 08:58:22	MarkDuplicates	Tracking 48623 as yet unmatched pairs. 3188 records in RAM.
INFO	2026-06-08 08:58:24	MarkDuplicates	Read   618,000,000 records.  Elapsed time: 00:20:14s.  Time for last 1,000,000:    2s.  Last read position: chrX:2,266,759
INFO	2026-06-08 08:58:24	MarkDuplicates	Tracking 44888 as yet unmatched pairs. 38968 records in RAM.
INFO	2026-06-08 08:58:26	MarkDuplicates	Read   619,000,000 records.  Elapsed time: 00:20:16s.  Time for last 1,000,000:    1s.  Last read position: chrX:10,015,304
INFO	2026-06-08 08:58:26	MarkDuplicates	Tracking 42138 as yet unmatched pairs. 36217 records in RAM.
INFO	2026-06-08 08:58:27	MarkDuplicates	Read   620,000,000 records.  Elapsed time: 00:20:17s.  Time for last 1,000,000:    1s.  Last read position: chrX:21,940,807
INFO	2026-06-08 08:58:27	MarkDuplicates	Tracking 40176 as yet unmatched pairs. 34254 records in RAM.
INFO	2026-06-08 08:58:29	MarkDuplicates	Read   621,000,000 records.  Elapsed time: 00:20:19s.  Time for last 1,000,000:    1s.  Last read position: chrX:40,680,811
INFO	2026-06-08 08:58:29	MarkDuplicates	Tracking 37717 as yet unmatched pairs. 31794 records in RAM.
INFO	2026-06-08 08:58:30	MarkDuplicates	Read   622,000,000 records.  Elapsed time: 00:20:20s.  Time for last 1,000,000:    1s.  Last read position: chrX:47,227,078
INFO	2026-06-08 08:58:30	MarkDuplicates	Tracking 35117 as yet unmatched pairs. 29192 records in RAM.
INFO	2026-06-08 08:58:32	MarkDuplicates	Read   623,000,000 records.  Elapsed time: 00:20:22s.  Time for last 1,000,000:    1s.  Last read position: chrX:51,895,107
INFO	2026-06-08 08:58:32	MarkDuplicates	Tracking 32976 as yet unmatched pairs. 27051 records in RAM.
INFO	2026-06-08 08:58:34	MarkDuplicates	Read   624,000,000 records.  Elapsed time: 00:20:24s.  Time for last 1,000,000:    1s.  Last read position: chrX:53,617,058
INFO	2026-06-08 08:58:34	MarkDuplicates	Tracking 30537 as yet unmatched pairs. 24612 records in RAM.
INFO	2026-06-08 08:58:35	MarkDuplicates	Read   625,000,000 records.  Elapsed time: 00:20:25s.  Time for last 1,000,000:    1s.  Last read position: chrX:70,500,543
INFO	2026-06-08 08:58:35	MarkDuplicates	Tracking 27090 as yet unmatched pairs. 21165 records in RAM.
INFO	2026-06-08 08:58:37	MarkDuplicates	Read   626,000,000 records.  Elapsed time: 00:20:26s.  Time for last 1,000,000:    1s.  Last read position: chrX:74,592,034
INFO	2026-06-08 08:58:37	MarkDuplicates	Tracking 24574 as yet unmatched pairs. 18649 records in RAM.
INFO	2026-06-08 08:58:38	MarkDuplicates	Read   627,000,000 records.  Elapsed time: 00:20:28s.  Time for last 1,000,000:    1s.  Last read position: chrX:100,646,255
INFO	2026-06-08 08:58:38	MarkDuplicates	Tracking 22274 as yet unmatched pairs. 16349 records in RAM.
INFO	2026-06-08 08:58:40	MarkDuplicates	Read   628,000,000 records.  Elapsed time: 00:20:30s.  Time for last 1,000,000:    1s.  Last read position: chrX:118,761,145
INFO	2026-06-08 08:58:40	MarkDuplicates	Tracking 20445 as yet unmatched pairs. 14519 records in RAM.
INFO	2026-06-08 08:58:41	MarkDuplicates	Read   629,000,000 records.  Elapsed time: 00:20:31s.  Time for last 1,000,000:    1s.  Last read position: chrX:130,140,593
INFO	2026-06-08 08:58:41	MarkDuplicates	Tracking 17392 as yet unmatched pairs. 11466 records in RAM.
INFO	2026-06-08 08:58:43	MarkDuplicates	Read   630,000,000 records.  Elapsed time: 00:20:33s.  Time for last 1,000,000:    1s.  Last read position: chrX:153,508,326
INFO	2026-06-08 08:58:43	MarkDuplicates	Tracking 16056 as yet unmatched pairs. 10130 records in RAM.
INFO	2026-06-08 08:58:44	MarkDuplicates	Read   631,000,000 records.  Elapsed time: 00:20:34s.  Time for last 1,000,000:    1s.  Last read position: chrX:154,352,788
INFO	2026-06-08 08:58:44	MarkDuplicates	Tracking 15019 as yet unmatched pairs. 9092 records in RAM.
INFO	2026-06-08 08:58:46	MarkDuplicates	Read   632,000,000 records.  Elapsed time: 00:20:36s.  Time for last 1,000,000:    1s.  Last read position: chrX:154,366,138
INFO	2026-06-08 08:58:46	MarkDuplicates	Tracking 11561 as yet unmatched pairs. 5634 records in RAM.
INFO	2026-06-08 08:58:48	MarkDuplicates	Read   633,000,000 records.  Elapsed time: 00:20:38s.  Time for last 1,000,000:    1s.  Last read position: chrX:155,046,573
INFO	2026-06-08 08:58:48	MarkDuplicates	Tracking 6298 as yet unmatched pairs. 371 records in RAM.
INFO	2026-06-08 08:58:49	MarkDuplicates	Read   634,000,000 records.  Elapsed time: 00:20:39s.  Time for last 1,000,000:    1s.  Last read position: GL000220.1:158,167
INFO	2026-06-08 08:58:49	MarkDuplicates	Tracking 3914 as yet unmatched pairs. 55 records in RAM.
INFO	2026-06-08 08:58:50	MarkDuplicates	Read   635,000,000 records.  Elapsed time: 00:20:40s.  Time for last 1,000,000:    1s.  Last read position: KI270733.1:178,324
INFO	2026-06-08 08:58:50	MarkDuplicates	Tracking 37 as yet unmatched pairs. 3 records in RAM.
INFO	2026-06-08 08:58:50	MarkDuplicates	Read 635075698 records. 0 pairs never matched.
INFO	2026-06-08 08:59:36	MarkDuplicates	After buildSortedReadEndLists freeMemory: 204139896; totalMemory: 234881024; maxMemory: 63585648640
INFO	2026-06-08 08:59:36	MarkDuplicates	Will retain up to 1987051520 duplicate indices before spilling to disk.
INFO	2026-06-08 08:59:40	MarkDuplicates	Traversing read pair information and detecting duplicates.
WARNING	2026-06-08 08:59:40	SortingCollection	There is not enough memory per file for buffering. Reading will be unbuffered.
INFO	2026-06-08 08:59:51	OpticalDuplicateFinder	Large duplicate set. size = 1381
INFO	2026-06-08 08:59:51	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-22,711
INFO	2026-06-08 08:59:51	OpticalDuplicateFinder	Large duplicate set. size = 1152
INFO	2026-06-08 08:59:51	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:9,357
INFO	2026-06-08 08:59:51	OpticalDuplicateFinder	Large duplicate set. size = 3475
INFO	2026-06-08 08:59:51	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-30,906
INFO	2026-06-08 08:59:51	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:12,771
INFO	2026-06-08 08:59:51	OpticalDuplicateFinder	compared         3,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:27,794
INFO	2026-06-08 08:59:51	OpticalDuplicateFinder	Large duplicate set. size = 1964
INFO	2026-06-08 08:59:51	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-18,763
INFO	2026-06-08 08:59:51	OpticalDuplicateFinder	Large duplicate set. size = 1966
INFO	2026-06-08 08:59:51	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:22,123
INFO	2026-06-08 08:59:51	OpticalDuplicateFinder	Large duplicate set. size = 1285
INFO	2026-06-08 08:59:51	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:11,800
INFO	2026-06-08 08:59:51	OpticalDuplicateFinder	Large duplicate set. size = 2903
INFO	2026-06-08 08:59:51	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-17,865
INFO	2026-06-08 08:59:51	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:9,915
INFO	2026-06-08 08:59:51	OpticalDuplicateFinder	Large duplicate set. size = 1357
INFO	2026-06-08 08:59:51	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-25,922
INFO	2026-06-08 08:59:51	OpticalDuplicateFinder	Large duplicate set. size = 1808
INFO	2026-06-08 08:59:51	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:26,484
INFO	2026-06-08 08:59:51	OpticalDuplicateFinder	Large duplicate set. size = 1056
INFO	2026-06-08 08:59:51	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:30,666
INFO	2026-06-08 08:59:51	OpticalDuplicateFinder	Large duplicate set. size = 1679
INFO	2026-06-08 08:59:51	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-20,745
INFO	2026-06-08 08:59:51	OpticalDuplicateFinder	Large duplicate set. size = 1291
INFO	2026-06-08 08:59:51	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-22,541
INFO	2026-06-08 08:59:51	OpticalDuplicateFinder	Large duplicate set. size = 1431
INFO	2026-06-08 08:59:51	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-22,630
INFO	2026-06-08 08:59:51	OpticalDuplicateFinder	Large duplicate set. size = 1061
INFO	2026-06-08 08:59:51	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-32,314
INFO	2026-06-08 08:59:51	OpticalDuplicateFinder	Large duplicate set. size = 1208
INFO	2026-06-08 08:59:51	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-18,116
INFO	2026-06-08 08:59:52	OpticalDuplicateFinder	Large duplicate set. size = 1425
INFO	2026-06-08 08:59:52	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-22,047
INFO	2026-06-08 08:59:52	OpticalDuplicateFinder	Large duplicate set. size = 1612
INFO	2026-06-08 08:59:52	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:8,435
INFO	2026-06-08 08:59:52	OpticalDuplicateFinder	Large duplicate set. size = 1370
INFO	2026-06-08 08:59:52	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-26,440
INFO	2026-06-08 08:59:52	OpticalDuplicateFinder	Large duplicate set. size = 1834
INFO	2026-06-08 08:59:52	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:4,673
INFO	2026-06-08 08:59:52	OpticalDuplicateFinder	Large duplicate set. size = 3516
INFO	2026-06-08 08:59:52	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:31,588
INFO	2026-06-08 08:59:52	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-15,341
INFO	2026-06-08 08:59:52	OpticalDuplicateFinder	compared         3,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:23,142
INFO	2026-06-08 08:59:52	OpticalDuplicateFinder	Large duplicate set. size = 1066
INFO	2026-06-08 08:59:52	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-27,249
INFO	2026-06-08 08:59:52	OpticalDuplicateFinder	Large duplicate set. size = 2105
INFO	2026-06-08 08:59:52	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:11,436
INFO	2026-06-08 08:59:52	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-19,952
INFO	2026-06-08 08:59:52	OpticalDuplicateFinder	Large duplicate set. size = 1079
INFO	2026-06-08 08:59:52	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-23,932
INFO	2026-06-08 08:59:52	OpticalDuplicateFinder	Large duplicate set. size = 3899
INFO	2026-06-08 08:59:52	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-21,983
INFO	2026-06-08 08:59:52	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:22,875
INFO	2026-06-08 08:59:52	OpticalDuplicateFinder	compared         3,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-32,314
INFO	2026-06-08 08:59:52	OpticalDuplicateFinder	Large duplicate set. size = 1294
INFO	2026-06-08 08:59:52	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-29,660
INFO	2026-06-08 08:59:52	OpticalDuplicateFinder	Large duplicate set. size = 1010
INFO	2026-06-08 08:59:52	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:27,616
INFO	2026-06-08 08:59:52	OpticalDuplicateFinder	Large duplicate set. size = 1020
INFO	2026-06-08 08:59:52	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:31,483
INFO	2026-06-08 08:59:52	OpticalDuplicateFinder	Large duplicate set. size = 1295
INFO	2026-06-08 08:59:52	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:4,131
INFO	2026-06-08 08:59:52	OpticalDuplicateFinder	Large duplicate set. size = 1707
INFO	2026-06-08 08:59:52	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:26,500
INFO	2026-06-08 08:59:52	OpticalDuplicateFinder	Large duplicate set. size = 1969
INFO	2026-06-08 08:59:52	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-17,056
INFO	2026-06-08 08:59:52	OpticalDuplicateFinder	Large duplicate set. size = 1400
INFO	2026-06-08 08:59:52	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-13,820
INFO	2026-06-08 08:59:52	OpticalDuplicateFinder	Large duplicate set. size = 1063
INFO	2026-06-08 08:59:52	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-22,476
INFO	2026-06-08 08:59:52	OpticalDuplicateFinder	Large duplicate set. size = 1228
INFO	2026-06-08 08:59:52	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-21,044
INFO	2026-06-08 08:59:52	OpticalDuplicateFinder	Large duplicate set. size = 1156
INFO	2026-06-08 08:59:52	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:9,527
INFO	2026-06-08 08:59:52	OpticalDuplicateFinder	Large duplicate set. size = 1305
INFO	2026-06-08 08:59:52	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:18,361
INFO	2026-06-08 08:59:52	OpticalDuplicateFinder	Large duplicate set. size = 1559
INFO	2026-06-08 08:59:52	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:29,275
INFO	2026-06-08 08:59:52	OpticalDuplicateFinder	Large duplicate set. size = 1540
INFO	2026-06-08 08:59:52	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:23,806
INFO	2026-06-08 08:59:52	OpticalDuplicateFinder	Large duplicate set. size = 1040
INFO	2026-06-08 08:59:52	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:27,770
INFO	2026-06-08 08:59:52	OpticalDuplicateFinder	Large duplicate set. size = 1250
INFO	2026-06-08 08:59:52	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-26,562
INFO	2026-06-08 08:59:52	OpticalDuplicateFinder	Large duplicate set. size = 1250
INFO	2026-06-08 08:59:52	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:25,238
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	Large duplicate set. size = 1065
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-30,785
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	Large duplicate set. size = 1402
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-30,259
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	Large duplicate set. size = 1153
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-14,346
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	Large duplicate set. size = 1606
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:10,846
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	Large duplicate set. size = 1108
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:15,004
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	Large duplicate set. size = 1058
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:7,804
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	Large duplicate set. size = 1050
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:1,057
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	Large duplicate set. size = 1112
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-20,065
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	Large duplicate set. size = 1574
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:21,427
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	Large duplicate set. size = 1200
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-22,063
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	Large duplicate set. size = 1352
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:17,042
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	Large duplicate set. size = 1214
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-18,253
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	Large duplicate set. size = 2871
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:13,790
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:13,127
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	Large duplicate set. size = 2444
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:4,932
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:27,325
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	Large duplicate set. size = 1585
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:29,315
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	Large duplicate set. size = 2401
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-23,050
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:5,611
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	Large duplicate set. size = 1194
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-17,476
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	Large duplicate set. size = 1161
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:4,956
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	Large duplicate set. size = 1410
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-18,051
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	Large duplicate set. size = 1390
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:21,880
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	Large duplicate set. size = 1208
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:28,927
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	Large duplicate set. size = 1119
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:2,578
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	Large duplicate set. size = 1335
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-17,339
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	Large duplicate set. size = 1161
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:21,209
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	Large duplicate set. size = 2083
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:16,468
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:9,737
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	Large duplicate set. size = 1106
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-31,974
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	Large duplicate set. size = 1056
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:11,905
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	Large duplicate set. size = 1103
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:6,776
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	Large duplicate set. size = 1095
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:1,243
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	Large duplicate set. size = 2231
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:28,336
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:9,147
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	Large duplicate set. size = 1057
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:20,586
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	Large duplicate set. size = 1119
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-29,927
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	Large duplicate set. size = 1015
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:8,370
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	Large duplicate set. size = 1914
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-15,956
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	Large duplicate set. size = 1121
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:29,258
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	Large duplicate set. size = 1067
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:22,495
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	Large duplicate set. size = 1066
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:30,067
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	Large duplicate set. size = 2046
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:14,276
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:3,484
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	Large duplicate set. size = 1102
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-15,381
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	Large duplicate set. size = 1023
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:21,791
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	Large duplicate set. size = 1323
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:23,045
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	Large duplicate set. size = 1240
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-24,288
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	Large duplicate set. size = 1526
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:26,945
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	Large duplicate set. size = 1226
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:19,777
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	Large duplicate set. size = 1486
INFO	2026-06-08 08:59:53	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-16,878
INFO	2026-06-08 08:59:54	OpticalDuplicateFinder	Large duplicate set. size = 1218
INFO	2026-06-08 08:59:54	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:11,744
INFO	2026-06-08 08:59:54	OpticalDuplicateFinder	Large duplicate set. size = 1077
INFO	2026-06-08 08:59:54	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-20,494
INFO	2026-06-08 08:59:54	OpticalDuplicateFinder	Large duplicate set. size = 1232
INFO	2026-06-08 08:59:54	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-25,437
INFO	2026-06-08 08:59:54	OpticalDuplicateFinder	Large duplicate set. size = 1691
INFO	2026-06-08 08:59:54	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:23,167
INFO	2026-06-08 08:59:54	OpticalDuplicateFinder	Large duplicate set. size = 1180
INFO	2026-06-08 08:59:54	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-27,799
INFO	2026-06-08 08:59:54	OpticalDuplicateFinder	Large duplicate set. size = 1166
INFO	2026-06-08 08:59:54	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-23,625
INFO	2026-06-08 08:59:54	OpticalDuplicateFinder	Large duplicate set. size = 1265
INFO	2026-06-08 08:59:54	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-24,183
INFO	2026-06-08 08:59:54	OpticalDuplicateFinder	Large duplicate set. size = 1315
INFO	2026-06-08 08:59:54	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-24,814
INFO	2026-06-08 08:59:54	OpticalDuplicateFinder	Large duplicate set. size = 1100
INFO	2026-06-08 08:59:54	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:27,479
INFO	2026-06-08 08:59:54	OpticalDuplicateFinder	Large duplicate set. size = 1774
INFO	2026-06-08 08:59:54	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:17,868
INFO	2026-06-08 08:59:54	OpticalDuplicateFinder	Large duplicate set. size = 2300
INFO	2026-06-08 08:59:54	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:7,343
INFO	2026-06-08 08:59:54	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-25,712
INFO	2026-06-08 08:59:54	OpticalDuplicateFinder	Large duplicate set. size = 1282
INFO	2026-06-08 08:59:54	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-27,702
INFO	2026-06-08 08:59:54	OpticalDuplicateFinder	Large duplicate set. size = 1461
INFO	2026-06-08 08:59:54	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:9,939
INFO	2026-06-08 08:59:54	OpticalDuplicateFinder	Large duplicate set. size = 1109
INFO	2026-06-08 08:59:54	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:13,653
INFO	2026-06-08 08:59:54	OpticalDuplicateFinder	Large duplicate set. size = 1534
INFO	2026-06-08 08:59:54	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:29,315
INFO	2026-06-08 08:59:54	OpticalDuplicateFinder	Large duplicate set. size = 1345
INFO	2026-06-08 08:59:54	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:21,419
INFO	2026-06-08 08:59:54	OpticalDuplicateFinder	Large duplicate set. size = 1837
INFO	2026-06-08 08:59:54	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-15,600
INFO	2026-06-08 08:59:54	OpticalDuplicateFinder	Large duplicate set. size = 1358
INFO	2026-06-08 08:59:54	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:25,755
INFO	2026-06-08 08:59:54	OpticalDuplicateFinder	Large duplicate set. size = 1532
INFO	2026-06-08 08:59:54	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-15,858
INFO	2026-06-08 08:59:54	OpticalDuplicateFinder	Large duplicate set. size = 1102
INFO	2026-06-08 08:59:54	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:14,251
INFO	2026-06-08 08:59:54	OpticalDuplicateFinder	Large duplicate set. size = 1039
INFO	2026-06-08 08:59:54	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:24,914
INFO	2026-06-08 08:59:54	OpticalDuplicateFinder	Large duplicate set. size = 1551
INFO	2026-06-08 08:59:54	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-22,646
INFO	2026-06-08 08:59:55	OpticalDuplicateFinder	Large duplicate set. size = 1004
INFO	2026-06-08 08:59:55	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:14,009
INFO	2026-06-08 08:59:55	OpticalDuplicateFinder	Large duplicate set. size = 1084
INFO	2026-06-08 08:59:55	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:4,471
INFO	2026-06-08 08:59:55	OpticalDuplicateFinder	Large duplicate set. size = 1044
INFO	2026-06-08 08:59:55	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-29,393
INFO	2026-06-08 08:59:55	OpticalDuplicateFinder	Large duplicate set. size = 1076
INFO	2026-06-08 08:59:55	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-28,430
INFO	2026-06-08 08:59:55	OpticalDuplicateFinder	Large duplicate set. size = 1672
INFO	2026-06-08 08:59:55	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:4,252
INFO	2026-06-08 08:59:55	OpticalDuplicateFinder	Large duplicate set. size = 1139
INFO	2026-06-08 08:59:55	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-17,048
INFO	2026-06-08 08:59:55	OpticalDuplicateFinder	Large duplicate set. size = 1286
INFO	2026-06-08 08:59:55	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:5,506
INFO	2026-06-08 08:59:55	OpticalDuplicateFinder	Large duplicate set. size = 1425
INFO	2026-06-08 08:59:55	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:27,810
INFO	2026-06-08 08:59:55	OpticalDuplicateFinder	Large duplicate set. size = 1184
INFO	2026-06-08 08:59:55	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-17,193
INFO	2026-06-08 08:59:55	OpticalDuplicateFinder	Large duplicate set. size = 1261
INFO	2026-06-08 08:59:55	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:3,904
INFO	2026-06-08 08:59:55	OpticalDuplicateFinder	Large duplicate set. size = 1992
INFO	2026-06-08 08:59:55	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-31,108
INFO	2026-06-08 08:59:55	OpticalDuplicateFinder	Large duplicate set. size = 2564
INFO	2026-06-08 08:59:55	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-30,785
INFO	2026-06-08 08:59:55	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:30,375
INFO	2026-06-08 08:59:55	OpticalDuplicateFinder	Large duplicate set. size = 1202
INFO	2026-06-08 08:59:55	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-29,652
INFO	2026-06-08 08:59:55	OpticalDuplicateFinder	Large duplicate set. size = 1003
INFO	2026-06-08 08:59:55	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-19,531
INFO	2026-06-08 08:59:55	OpticalDuplicateFinder	Large duplicate set. size = 2276
INFO	2026-06-08 08:59:55	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-15,689
INFO	2026-06-08 08:59:55	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-30,331
INFO	2026-06-08 08:59:55	OpticalDuplicateFinder	Large duplicate set. size = 1769
INFO	2026-06-08 08:59:55	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:2,424
INFO	2026-06-08 08:59:55	OpticalDuplicateFinder	Large duplicate set. size = 1057
INFO	2026-06-08 08:59:55	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:4,948
INFO	2026-06-08 08:59:55	OpticalDuplicateFinder	Large duplicate set. size = 1017
INFO	2026-06-08 08:59:55	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-16,449
INFO	2026-06-08 08:59:56	OpticalDuplicateFinder	Large duplicate set. size = 1470
INFO	2026-06-08 08:59:56	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:9,171
INFO	2026-06-08 08:59:56	OpticalDuplicateFinder	Large duplicate set. size = 1416
INFO	2026-06-08 08:59:56	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:16,039
INFO	2026-06-08 08:59:56	OpticalDuplicateFinder	Large duplicate set. size = 1194
INFO	2026-06-08 08:59:56	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-25,761
INFO	2026-06-08 08:59:56	OpticalDuplicateFinder	Large duplicate set. size = 1208
INFO	2026-06-08 08:59:56	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-20,664
INFO	2026-06-08 08:59:56	OpticalDuplicateFinder	Large duplicate set. size = 1356
INFO	2026-06-08 08:59:56	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:30,019
INFO	2026-06-08 08:59:56	OpticalDuplicateFinder	Large duplicate set. size = 1373
INFO	2026-06-08 08:59:56	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:19,825
INFO	2026-06-08 08:59:56	OpticalDuplicateFinder	Large duplicate set. size = 1422
INFO	2026-06-08 08:59:56	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-17,323
INFO	2026-06-08 08:59:56	OpticalDuplicateFinder	Large duplicate set. size = 1066
INFO	2026-06-08 08:59:56	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:3,144
INFO	2026-06-08 08:59:56	OpticalDuplicateFinder	Large duplicate set. size = 1820
INFO	2026-06-08 08:59:56	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:25,626
INFO	2026-06-08 08:59:56	OpticalDuplicateFinder	Large duplicate set. size = 1170
INFO	2026-06-08 08:59:56	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:31,863
INFO	2026-06-08 08:59:56	OpticalDuplicateFinder	Large duplicate set. size = 1042
INFO	2026-06-08 08:59:56	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:17,196
INFO	2026-06-08 08:59:56	OpticalDuplicateFinder	Large duplicate set. size = 1260
INFO	2026-06-08 08:59:56	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:9,422
INFO	2026-06-08 08:59:57	OpticalDuplicateFinder	Large duplicate set. size = 1039
INFO	2026-06-08 08:59:57	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:5,336
INFO	2026-06-08 08:59:57	OpticalDuplicateFinder	Large duplicate set. size = 1221
INFO	2026-06-08 08:59:57	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-29,142
INFO	2026-06-08 08:59:57	OpticalDuplicateFinder	Large duplicate set. size = 2721
INFO	2026-06-08 08:59:57	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:16,460
INFO	2026-06-08 08:59:57	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-27,265
INFO	2026-06-08 08:59:57	OpticalDuplicateFinder	Large duplicate set. size = 1069
INFO	2026-06-08 08:59:57	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-21,708
INFO	2026-06-08 08:59:57	OpticalDuplicateFinder	Large duplicate set. size = 1282
INFO	2026-06-08 08:59:57	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:2,408
INFO	2026-06-08 08:59:57	OpticalDuplicateFinder	Large duplicate set. size = 1107
INFO	2026-06-08 08:59:57	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:21,905
INFO	2026-06-08 08:59:57	OpticalDuplicateFinder	Large duplicate set. size = 1299
INFO	2026-06-08 08:59:57	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-28,778
INFO	2026-06-08 08:59:57	OpticalDuplicateFinder	Large duplicate set. size = 1434
INFO	2026-06-08 08:59:57	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:2,472
INFO	2026-06-08 08:59:57	OpticalDuplicateFinder	Large duplicate set. size = 2335
INFO	2026-06-08 08:59:57	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-22,881
INFO	2026-06-08 08:59:57	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-16,231
INFO	2026-06-08 08:59:57	OpticalDuplicateFinder	Large duplicate set. size = 1042
INFO	2026-06-08 08:59:57	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-30,744
INFO	2026-06-08 08:59:57	OpticalDuplicateFinder	Large duplicate set. size = 1873
INFO	2026-06-08 08:59:57	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-22,848
INFO	2026-06-08 08:59:57	OpticalDuplicateFinder	Large duplicate set. size = 1369
INFO	2026-06-08 08:59:57	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:30,019
INFO	2026-06-08 08:59:57	OpticalDuplicateFinder	Large duplicate set. size = 1242
INFO	2026-06-08 08:59:57	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-15,397
INFO	2026-06-08 08:59:57	OpticalDuplicateFinder	Large duplicate set. size = 1383
INFO	2026-06-08 08:59:57	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-17,509
INFO	2026-06-08 08:59:57	OpticalDuplicateFinder	Large duplicate set. size = 1075
INFO	2026-06-08 08:59:57	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-30,008
INFO	2026-06-08 08:59:57	OpticalDuplicateFinder	Large duplicate set. size = 1776
INFO	2026-06-08 08:59:57	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:3,459
INFO	2026-06-08 08:59:57	OpticalDuplicateFinder	Large duplicate set. size = 1029
INFO	2026-06-08 08:59:57	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:9,155
INFO	2026-06-08 08:59:57	OpticalDuplicateFinder	Large duplicate set. size = 1085
INFO	2026-06-08 08:59:57	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:2,966
INFO	2026-06-08 08:59:57	OpticalDuplicateFinder	Large duplicate set. size = 1285
INFO	2026-06-08 08:59:57	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-18,585
INFO	2026-06-08 08:59:57	OpticalDuplicateFinder	Large duplicate set. size = 1053
INFO	2026-06-08 08:59:57	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-32,645
INFO	2026-06-08 08:59:57	OpticalDuplicateFinder	Large duplicate set. size = 1246
INFO	2026-06-08 08:59:57	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:5,668
INFO	2026-06-08 08:59:57	OpticalDuplicateFinder	Large duplicate set. size = 1488
INFO	2026-06-08 08:59:57	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:4,204
INFO	2026-06-08 08:59:57	OpticalDuplicateFinder	Large duplicate set. size = 1194
INFO	2026-06-08 08:59:57	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-22,614
INFO	2026-06-08 08:59:57	OpticalDuplicateFinder	Large duplicate set. size = 1287
INFO	2026-06-08 08:59:57	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:32,640
INFO	2026-06-08 08:59:57	OpticalDuplicateFinder	Large duplicate set. size = 1276
INFO	2026-06-08 08:59:57	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:29,849
INFO	2026-06-08 08:59:57	OpticalDuplicateFinder	Large duplicate set. size = 1085
INFO	2026-06-08 08:59:57	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-17,096
INFO	2026-06-08 08:59:58	OpticalDuplicateFinder	Large duplicate set. size = 1050
INFO	2026-06-08 08:59:58	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:12,399
INFO	2026-06-08 08:59:58	OpticalDuplicateFinder	Large duplicate set. size = 1115
INFO	2026-06-08 08:59:58	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-14,669
INFO	2026-06-08 08:59:58	OpticalDuplicateFinder	Large duplicate set. size = 1925
INFO	2026-06-08 08:59:58	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:31,402
INFO	2026-06-08 08:59:58	OpticalDuplicateFinder	Large duplicate set. size = 1827
INFO	2026-06-08 08:59:58	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:30,949
INFO	2026-06-08 08:59:58	OpticalDuplicateFinder	Large duplicate set. size = 1236
INFO	2026-06-08 08:59:58	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:6,404
INFO	2026-06-08 08:59:58	OpticalDuplicateFinder	Large duplicate set. size = 1705
INFO	2026-06-08 08:59:58	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:7,043
INFO	2026-06-08 08:59:58	OpticalDuplicateFinder	Large duplicate set. size = 1382
INFO	2026-06-08 08:59:58	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-21,651
INFO	2026-06-08 08:59:58	OpticalDuplicateFinder	Large duplicate set. size = 1511
INFO	2026-06-08 08:59:58	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:23,692
INFO	2026-06-08 08:59:58	OpticalDuplicateFinder	Large duplicate set. size = 1104
INFO	2026-06-08 08:59:58	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:32,753
INFO	2026-06-08 08:59:58	OpticalDuplicateFinder	Large duplicate set. size = 1076
INFO	2026-06-08 08:59:58	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:3,176
INFO	2026-06-08 08:59:58	OpticalDuplicateFinder	Large duplicate set. size = 1268
INFO	2026-06-08 08:59:58	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-28,633
INFO	2026-06-08 08:59:58	OpticalDuplicateFinder	Large duplicate set. size = 1079
INFO	2026-06-08 08:59:58	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-28,980
INFO	2026-06-08 08:59:58	OpticalDuplicateFinder	Large duplicate set. size = 1113
INFO	2026-06-08 08:59:58	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:7,456
INFO	2026-06-08 08:59:58	OpticalDuplicateFinder	Large duplicate set. size = 1614
INFO	2026-06-08 08:59:58	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:21,241
INFO	2026-06-08 08:59:58	OpticalDuplicateFinder	Large duplicate set. size = 1278
INFO	2026-06-08 08:59:58	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-31,375
INFO	2026-06-08 08:59:58	OpticalDuplicateFinder	Large duplicate set. size = 1222
INFO	2026-06-08 08:59:58	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:11,493
INFO	2026-06-08 08:59:58	OpticalDuplicateFinder	Large duplicate set. size = 1565
INFO	2026-06-08 08:59:58	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:13,200
INFO	2026-06-08 08:59:58	OpticalDuplicateFinder	Large duplicate set. size = 1323
INFO	2026-06-08 08:59:58	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-16,854
INFO	2026-06-08 08:59:58	OpticalDuplicateFinder	Large duplicate set. size = 1250
INFO	2026-06-08 08:59:58	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:2,610
INFO	2026-06-08 08:59:58	OpticalDuplicateFinder	Large duplicate set. size = 1890
INFO	2026-06-08 08:59:58	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-21,934
INFO	2026-06-08 08:59:58	OpticalDuplicateFinder	Large duplicate set. size = 1509
INFO	2026-06-08 08:59:58	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-28,819
INFO	2026-06-08 08:59:58	OpticalDuplicateFinder	Large duplicate set. size = 3325
INFO	2026-06-08 08:59:58	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-26,837
INFO	2026-06-08 08:59:58	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:27,899
INFO	2026-06-08 08:59:58	OpticalDuplicateFinder	compared         3,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:30,310
INFO	2026-06-08 08:59:58	OpticalDuplicateFinder	Large duplicate set. size = 1356
INFO	2026-06-08 08:59:58	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:13,661
INFO	2026-06-08 08:59:58	OpticalDuplicateFinder	Large duplicate set. size = 2868
INFO	2026-06-08 08:59:58	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-19,070
INFO	2026-06-08 08:59:58	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:4,074
INFO	2026-06-08 08:59:58	OpticalDuplicateFinder	Large duplicate set. size = 2557
INFO	2026-06-08 08:59:58	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-20,170
INFO	2026-06-08 08:59:58	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:20,699
INFO	2026-06-08 08:59:58	OpticalDuplicateFinder	Large duplicate set. size = 1361
INFO	2026-06-08 08:59:58	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:27,600
INFO	2026-06-08 08:59:58	OpticalDuplicateFinder	Large duplicate set. size = 1218
INFO	2026-06-08 08:59:58	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-18,803
INFO	2026-06-08 08:59:58	OpticalDuplicateFinder	Large duplicate set. size = 1098
INFO	2026-06-08 08:59:58	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:11,218
INFO	2026-06-08 08:59:59	OpticalDuplicateFinder	Large duplicate set. size = 1130
INFO	2026-06-08 08:59:59	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-18,099
INFO	2026-06-08 08:59:59	OpticalDuplicateFinder	Large duplicate set. size = 1256
INFO	2026-06-08 08:59:59	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:4,649
INFO	2026-06-08 08:59:59	OpticalDuplicateFinder	Large duplicate set. size = 1519
INFO	2026-06-08 08:59:59	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-28,689
INFO	2026-06-08 08:59:59	OpticalDuplicateFinder	Large duplicate set. size = 1473
INFO	2026-06-08 08:59:59	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:23,935
INFO	2026-06-08 08:59:59	OpticalDuplicateFinder	Large duplicate set. size = 1101
INFO	2026-06-08 08:59:59	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:2,157
INFO	2026-06-08 08:59:59	OpticalDuplicateFinder	Large duplicate set. size = 1349
INFO	2026-06-08 08:59:59	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:12,286
INFO	2026-06-08 08:59:59	OpticalDuplicateFinder	Large duplicate set. size = 1027
INFO	2026-06-08 08:59:59	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:28,571
INFO	2026-06-08 08:59:59	OpticalDuplicateFinder	Large duplicate set. size = 1961
INFO	2026-06-08 08:59:59	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:9,430
INFO	2026-06-08 08:59:59	OpticalDuplicateFinder	Large duplicate set. size = 1072
INFO	2026-06-08 08:59:59	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:15,052
INFO	2026-06-08 08:59:59	OpticalDuplicateFinder	Large duplicate set. size = 1126
INFO	2026-06-08 08:59:59	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:9,260
INFO	2026-06-08 09:00:06	OpticalDuplicateFinder	Large duplicate set. size = 1328
INFO	2026-06-08 09:00:06	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:6,331
INFO	2026-06-08 09:00:06	OpticalDuplicateFinder	Large duplicate set. size = 2596
INFO	2026-06-08 09:00:06	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:14,971
INFO	2026-06-08 09:00:06	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-25,720
INFO	2026-06-08 09:00:06	OpticalDuplicateFinder	Large duplicate set. size = 1126
INFO	2026-06-08 09:00:06	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:6,267
INFO	2026-06-08 09:00:10	OpticalDuplicateFinder	Large duplicate set. size = 1437
INFO	2026-06-08 09:00:10	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:2,691
INFO	2026-06-08 09:00:10	OpticalDuplicateFinder	Large duplicate set. size = 1260
INFO	2026-06-08 09:00:10	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-20,098
INFO	2026-06-08 09:00:12	OpticalDuplicateFinder	Large duplicate set. size = 1029
INFO	2026-06-08 09:00:12	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:23,684
INFO	2026-06-08 09:00:22	OpticalDuplicateFinder	Large duplicate set. size = 1032
INFO	2026-06-08 09:00:22	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:21,613
INFO	2026-06-08 09:00:39	OpticalDuplicateFinder	Large duplicate set. size = 2664
INFO	2026-06-08 09:00:39	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-29,765
INFO	2026-06-08 09:00:39	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-30,841
INFO	2026-06-08 09:00:39	OpticalDuplicateFinder	Large duplicate set. size = 1873
INFO	2026-06-08 09:00:39	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:3,435
INFO	2026-06-08 09:00:39	OpticalDuplicateFinder	Large duplicate set. size = 1178
INFO	2026-06-08 09:00:40	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-17,808
INFO	2026-06-08 09:00:40	OpticalDuplicateFinder	Large duplicate set. size = 1165
INFO	2026-06-08 09:00:40	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:4,689
INFO	2026-06-08 09:00:40	OpticalDuplicateFinder	Large duplicate set. size = 2400
INFO	2026-06-08 09:00:40	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:23,579
INFO	2026-06-08 09:00:40	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:20,448
INFO	2026-06-08 09:00:40	OpticalDuplicateFinder	Large duplicate set. size = 1057
INFO	2026-06-08 09:00:40	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:12,803
INFO	2026-06-08 09:00:40	OpticalDuplicateFinder	Large duplicate set. size = 1007
INFO	2026-06-08 09:00:40	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:14,106
INFO	2026-06-08 09:00:40	OpticalDuplicateFinder	Large duplicate set. size = 1464
INFO	2026-06-08 09:00:40	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-24,329
INFO	2026-06-08 09:00:40	OpticalDuplicateFinder	Large duplicate set. size = 1066
INFO	2026-06-08 09:00:40	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:24,696
INFO	2026-06-08 09:00:40	OpticalDuplicateFinder	Large duplicate set. size = 1451
INFO	2026-06-08 09:00:40	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:9,664
INFO	2026-06-08 09:00:40	OpticalDuplicateFinder	Large duplicate set. size = 1689
INFO	2026-06-08 09:00:40	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:32,511
INFO	2026-06-08 09:00:40	OpticalDuplicateFinder	Large duplicate set. size = 1121
INFO	2026-06-08 09:00:40	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:31,920
INFO	2026-06-08 09:00:40	OpticalDuplicateFinder	Large duplicate set. size = 1064
INFO	2026-06-08 09:00:40	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:14,284
INFO	2026-06-08 09:00:40	OpticalDuplicateFinder	Large duplicate set. size = 1990
INFO	2026-06-08 09:00:40	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:9,583
INFO	2026-06-08 09:00:40	OpticalDuplicateFinder	Large duplicate set. size = 1201
INFO	2026-06-08 09:00:40	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-16,093
INFO	2026-06-08 09:00:40	OpticalDuplicateFinder	Large duplicate set. size = 1346
INFO	2026-06-08 09:00:40	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:16,945
INFO	2026-06-08 09:00:40	OpticalDuplicateFinder	Large duplicate set. size = 1022
INFO	2026-06-08 09:00:40	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-21,975
INFO	2026-06-08 09:00:40	OpticalDuplicateFinder	Large duplicate set. size = 1009
INFO	2026-06-08 09:00:40	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:3,718
INFO	2026-06-08 09:00:40	OpticalDuplicateFinder	Large duplicate set. size = 1343
INFO	2026-06-08 09:00:40	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:27,932
INFO	2026-06-08 09:00:40	OpticalDuplicateFinder	Large duplicate set. size = 1315
INFO	2026-06-08 09:00:40	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:16,646
INFO	2026-06-08 09:00:40	OpticalDuplicateFinder	Large duplicate set. size = 1181
INFO	2026-06-08 09:00:40	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-21,255
INFO	2026-06-08 09:00:40	OpticalDuplicateFinder	Large duplicate set. size = 1149
INFO	2026-06-08 09:00:40	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-31,092
INFO	2026-06-08 09:00:40	OpticalDuplicateFinder	Large duplicate set. size = 1271
INFO	2026-06-08 09:00:40	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-19,459
INFO	2026-06-08 09:00:40	OpticalDuplicateFinder	Large duplicate set. size = 1426
INFO	2026-06-08 09:00:40	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-20,162
INFO	2026-06-08 09:00:40	OpticalDuplicateFinder	Large duplicate set. size = 1044
INFO	2026-06-08 09:00:40	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-27,484
INFO	2026-06-08 09:00:40	OpticalDuplicateFinder	Large duplicate set. size = 1192
INFO	2026-06-08 09:00:40	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:5,425
INFO	2026-06-08 09:00:40	OpticalDuplicateFinder	Large duplicate set. size = 1020
INFO	2026-06-08 09:00:40	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:25,221
INFO	2026-06-08 09:00:40	OpticalDuplicateFinder	Large duplicate set. size = 1427
INFO	2026-06-08 09:00:40	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:31,661
INFO	2026-06-08 09:00:40	OpticalDuplicateFinder	Large duplicate set. size = 1250
INFO	2026-06-08 09:00:40	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-26,893
INFO	2026-06-08 09:00:40	OpticalDuplicateFinder	Large duplicate set. size = 1428
INFO	2026-06-08 09:00:40	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:26,484
INFO	2026-06-08 09:00:40	OpticalDuplicateFinder	Large duplicate set. size = 1072
INFO	2026-06-08 09:00:40	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:28,296
INFO	2026-06-08 09:00:40	OpticalDuplicateFinder	Large duplicate set. size = 2946
INFO	2026-06-08 09:00:40	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-18,900
INFO	2026-06-08 09:00:40	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:31,313
INFO	2026-06-08 09:00:40	OpticalDuplicateFinder	Large duplicate set. size = 1210
INFO	2026-06-08 09:00:40	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:26,904
INFO	2026-06-08 09:00:40	OpticalDuplicateFinder	Large duplicate set. size = 1244
INFO	2026-06-08 09:00:40	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:26,572
INFO	2026-06-08 09:00:40	OpticalDuplicateFinder	Large duplicate set. size = 1202
INFO	2026-06-08 09:00:40	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:22,301
INFO	2026-06-08 09:00:41	OpticalDuplicateFinder	Large duplicate set. size = 1249
INFO	2026-06-08 09:00:41	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:10,668
INFO	2026-06-08 09:00:41	OpticalDuplicateFinder	Large duplicate set. size = 1443
INFO	2026-06-08 09:00:41	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-23,390
INFO	2026-06-08 09:00:41	OpticalDuplicateFinder	Large duplicate set. size = 1088
INFO	2026-06-08 09:00:41	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:26,144
INFO	2026-06-08 09:00:41	OpticalDuplicateFinder	Large duplicate set. size = 1250
INFO	2026-06-08 09:00:41	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-32,087
INFO	2026-06-08 09:00:41	OpticalDuplicateFinder	Large duplicate set. size = 1137
INFO	2026-06-08 09:00:41	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-18,722
INFO	2026-06-08 09:00:41	OpticalDuplicateFinder	Large duplicate set. size = 1403
INFO	2026-06-08 09:00:41	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-25,704
INFO	2026-06-08 09:00:41	OpticalDuplicateFinder	Large duplicate set. size = 1008
INFO	2026-06-08 09:00:41	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:3,103
INFO	2026-06-08 09:00:41	OpticalDuplicateFinder	Large duplicate set. size = 1269
INFO	2026-06-08 09:00:41	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-26,456
INFO	2026-06-08 09:00:41	OpticalDuplicateFinder	Large duplicate set. size = 1182
INFO	2026-06-08 09:00:41	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:8,346
INFO	2026-06-08 09:00:41	OpticalDuplicateFinder	Large duplicate set. size = 1485
INFO	2026-06-08 09:00:41	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:17,884
INFO	2026-06-08 09:00:41	OpticalDuplicateFinder	Large duplicate set. size = 1994
INFO	2026-06-08 09:00:41	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:14,866
INFO	2026-06-08 09:00:41	OpticalDuplicateFinder	Large duplicate set. size = 1386
INFO	2026-06-08 09:00:41	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:13,952
INFO	2026-06-08 09:00:41	OpticalDuplicateFinder	Large duplicate set. size = 1268
INFO	2026-06-08 09:00:41	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:13,976
INFO	2026-06-08 09:00:42	OpticalDuplicateFinder	Large duplicate set. size = 1254
INFO	2026-06-08 09:00:42	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:28,401
INFO	2026-06-08 09:00:42	OpticalDuplicateFinder	Large duplicate set. size = 1026
INFO	2026-06-08 09:00:42	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-32,216
INFO	2026-06-08 09:00:42	OpticalDuplicateFinder	Large duplicate set. size = 1304
INFO	2026-06-08 09:00:42	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-27,921
INFO	2026-06-08 09:00:42	OpticalDuplicateFinder	Large duplicate set. size = 1274
INFO	2026-06-08 09:00:42	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:28,150
INFO	2026-06-08 09:00:42	OpticalDuplicateFinder	Large duplicate set. size = 1355
INFO	2026-06-08 09:00:42	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:26,354
INFO	2026-06-08 09:00:42	OpticalDuplicateFinder	Large duplicate set. size = 1134
INFO	2026-06-08 09:00:42	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-24,612
INFO	2026-06-08 09:00:42	OpticalDuplicateFinder	Large duplicate set. size = 1076
INFO	2026-06-08 09:00:42	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:7,569
INFO	2026-06-08 09:00:42	OpticalDuplicateFinder	Large duplicate set. size = 1129
INFO	2026-06-08 09:00:42	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-26,343
INFO	2026-06-08 09:00:42	OpticalDuplicateFinder	Large duplicate set. size = 1544
INFO	2026-06-08 09:00:42	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:25,772
INFO	2026-06-08 09:00:42	OpticalDuplicateFinder	Large duplicate set. size = 1496
INFO	2026-06-08 09:00:42	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:5,765
INFO	2026-06-08 09:00:42	OpticalDuplicateFinder	Large duplicate set. size = 1541
INFO	2026-06-08 09:00:42	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:22,244
INFO	2026-06-08 09:00:42	OpticalDuplicateFinder	Large duplicate set. size = 1960
INFO	2026-06-08 09:00:42	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-17,096
INFO	2026-06-08 09:00:42	OpticalDuplicateFinder	Large duplicate set. size = 1448
INFO	2026-06-08 09:00:42	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-20,543
INFO	2026-06-08 09:00:42	OpticalDuplicateFinder	Large duplicate set. size = 2157
INFO	2026-06-08 09:00:42	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:16,784
INFO	2026-06-08 09:00:42	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:10,530
INFO	2026-06-08 09:00:42	OpticalDuplicateFinder	Large duplicate set. size = 1142
INFO	2026-06-08 09:00:42	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:25,974
INFO	2026-06-08 09:00:42	OpticalDuplicateFinder	Large duplicate set. size = 1851
INFO	2026-06-08 09:00:42	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-17,865
INFO	2026-06-08 09:00:42	OpticalDuplicateFinder	Large duplicate set. size = 1279
INFO	2026-06-08 09:00:42	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-13,990
INFO	2026-06-08 09:00:42	OpticalDuplicateFinder	Large duplicate set. size = 1080
INFO	2026-06-08 09:00:42	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:1,202
INFO	2026-06-08 09:00:42	OpticalDuplicateFinder	Large duplicate set. size = 1692
INFO	2026-06-08 09:00:42	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-18,585
INFO	2026-06-08 09:00:42	OpticalDuplicateFinder	Large duplicate set. size = 1127
INFO	2026-06-08 09:00:42	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:13,847
INFO	2026-06-08 09:00:42	OpticalDuplicateFinder	Large duplicate set. size = 1586
INFO	2026-06-08 09:00:42	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:8,783
INFO	2026-06-08 09:00:42	OpticalDuplicateFinder	Large duplicate set. size = 1555
INFO	2026-06-08 09:00:42	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:9,389
INFO	2026-06-08 09:00:42	OpticalDuplicateFinder	Large duplicate set. size = 1397
INFO	2026-06-08 09:00:42	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:16,929
INFO	2026-06-08 09:00:42	OpticalDuplicateFinder	Large duplicate set. size = 1057
INFO	2026-06-08 09:00:42	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-20,251
INFO	2026-06-08 09:00:42	OpticalDuplicateFinder	Large duplicate set. size = 1188
INFO	2026-06-08 09:00:42	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:27,810
INFO	2026-06-08 09:00:42	OpticalDuplicateFinder	Large duplicate set. size = 1144
INFO	2026-06-08 09:00:42	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:7,051
INFO	2026-06-08 09:00:42	OpticalDuplicateFinder	Large duplicate set. size = 1674
INFO	2026-06-08 09:00:42	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-15,227
INFO	2026-06-08 09:00:42	OpticalDuplicateFinder	Large duplicate set. size = 1265
INFO	2026-06-08 09:00:42	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:16,905
INFO	2026-06-08 09:00:42	OpticalDuplicateFinder	Large duplicate set. size = 1587
INFO	2026-06-08 09:00:42	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:2,400
INFO	2026-06-08 09:00:42	OpticalDuplicateFinder	Large duplicate set. size = 1475
INFO	2026-06-08 09:00:42	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-14,758
INFO	2026-06-08 09:00:42	OpticalDuplicateFinder	Large duplicate set. size = 1164
INFO	2026-06-08 09:00:42	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:20,821
INFO	2026-06-08 09:00:42	OpticalDuplicateFinder	Large duplicate set. size = 1320
INFO	2026-06-08 09:00:42	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:15,724
INFO	2026-06-08 09:00:42	OpticalDuplicateFinder	Large duplicate set. size = 1012
INFO	2026-06-08 09:00:42	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:12,480
INFO	2026-06-08 09:00:43	OpticalDuplicateFinder	Large duplicate set. size = 1061
INFO	2026-06-08 09:00:43	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:16,573
INFO	2026-06-08 09:00:43	OpticalDuplicateFinder	Large duplicate set. size = 1082
INFO	2026-06-08 09:00:43	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:19,445
INFO	2026-06-08 09:00:43	OpticalDuplicateFinder	Large duplicate set. size = 1155
INFO	2026-06-08 09:00:43	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:29,040
INFO	2026-06-08 09:00:43	OpticalDuplicateFinder	Large duplicate set. size = 1076
INFO	2026-06-08 09:00:43	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:13,491
INFO	2026-06-08 09:00:43	OpticalDuplicateFinder	Large duplicate set. size = 1400
INFO	2026-06-08 09:00:43	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:12,083
INFO	2026-06-08 09:00:43	OpticalDuplicateFinder	Large duplicate set. size = 1657
INFO	2026-06-08 09:00:43	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:9,948
INFO	2026-06-08 09:00:43	OpticalDuplicateFinder	Large duplicate set. size = 1244
INFO	2026-06-08 09:00:43	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:32,721
INFO	2026-06-08 09:00:43	OpticalDuplicateFinder	Large duplicate set. size = 2017
INFO	2026-06-08 09:00:43	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:2,658
INFO	2026-06-08 09:00:43	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:20,456
INFO	2026-06-08 09:00:43	OpticalDuplicateFinder	Large duplicate set. size = 1116
INFO	2026-06-08 09:00:43	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-31,788
INFO	2026-06-08 09:00:43	OpticalDuplicateFinder	Large duplicate set. size = 1113
INFO	2026-06-08 09:00:43	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:14,971
INFO	2026-06-08 09:00:43	OpticalDuplicateFinder	Large duplicate set. size = 1300
INFO	2026-06-08 09:00:43	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:16,484
INFO	2026-06-08 09:00:43	OpticalDuplicateFinder	Large duplicate set. size = 1306
INFO	2026-06-08 09:00:43	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-24,361
INFO	2026-06-08 09:00:43	OpticalDuplicateFinder	Large duplicate set. size = 1922
INFO	2026-06-08 09:00:43	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-24,037
INFO	2026-06-08 09:00:43	OpticalDuplicateFinder	Large duplicate set. size = 1218
INFO	2026-06-08 09:00:43	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-14,443
INFO	2026-06-08 09:00:43	OpticalDuplicateFinder	Large duplicate set. size = 1167
INFO	2026-06-08 09:00:43	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-18,633
INFO	2026-06-08 09:00:43	OpticalDuplicateFinder	Large duplicate set. size = 1161
INFO	2026-06-08 09:00:43	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:16,339
INFO	2026-06-08 09:00:43	OpticalDuplicateFinder	Large duplicate set. size = 1206
INFO	2026-06-08 09:00:43	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:2,877
INFO	2026-06-08 09:00:43	OpticalDuplicateFinder	Large duplicate set. size = 1084
INFO	2026-06-08 09:00:43	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:24,639
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	Large duplicate set. size = 1066
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-20,357
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	Large duplicate set. size = 1413
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-21,044
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	Large duplicate set. size = 1504
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-19,507
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	Large duplicate set. size = 1932
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:23,636
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	Large duplicate set. size = 1023
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:11,064
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	Large duplicate set. size = 1184
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:27,155
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	Large duplicate set. size = 1513
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:21,379
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	Large duplicate set. size = 1924
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-16,595
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	Large duplicate set. size = 1049
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:17,738
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	Large duplicate set. size = 1033
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-23,900
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	Large duplicate set. size = 1143
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:23,951
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	Large duplicate set. size = 1094
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-14,580
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	Large duplicate set. size = 1289
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-15,090
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	Large duplicate set. size = 1034
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-23,851
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	Large duplicate set. size = 3317
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-18,601
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:31,451
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	compared         3,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-22,646
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	Large duplicate set. size = 1084
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:20,416
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	Large duplicate set. size = 1596
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:11,331
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	Large duplicate set. size = 1001
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-25,947
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	Large duplicate set. size = 1098
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-20,462
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	Large duplicate set. size = 2715
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:22,074
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:29,380
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	Large duplicate set. size = 2369
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:21,063
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:15,853
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	Large duplicate set. size = 1237
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:10,109
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	Large duplicate set. size = 1477
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:5,822
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	Large duplicate set. size = 2880
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:2,400
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:5,668
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	Large duplicate set. size = 2515
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:11,808
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-26,651
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	Large duplicate set. size = 2687
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:26,920
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:8,928
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	Large duplicate set. size = 1896
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:24,461
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	Large duplicate set. size = 1998
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:12,852
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	Large duplicate set. size = 4001
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:21,565
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-17,331
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	compared         3,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:14,599
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	compared         4,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:17,512
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	Large duplicate set. size = 1362
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:15,505
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	Large duplicate set. size = 1443
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-20,753
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	Large duplicate set. size = 1386
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-14,232
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	Large duplicate set. size = 1530
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-14,289
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	Large duplicate set. size = 2668
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:10,206
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:28,733
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	Large duplicate set. size = 1700
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:30,609
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	Large duplicate set. size = 5081
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:16,978
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:20,853
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	compared         3,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:14,397
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	compared         4,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:23,976
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	compared         5,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-17,274
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	Large duplicate set. size = 1846
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-16,789
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	Large duplicate set. size = 1065
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:30,795
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	Large duplicate set. size = 2119
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:10,837
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:31,426
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	Large duplicate set. size = 1267
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:26,289
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	Large duplicate set. size = 2018
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-24,709
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-14,710
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	Large duplicate set. size = 1153
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:15,619
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	Large duplicate set. size = 2362
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-16,959
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:5,676
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	Large duplicate set. size = 1294
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-16,093
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	Large duplicate set. size = 1113
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:9,187
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	Large duplicate set. size = 1113
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:32,745
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	Large duplicate set. size = 1048
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-31,933
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	Large duplicate set. size = 1230
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:20,715
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	Large duplicate set. size = 1828
INFO	2026-06-08 09:00:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:30,561
INFO	2026-06-08 09:01:00	OpticalDuplicateFinder	Large duplicate set. size = 1175
INFO	2026-06-08 09:01:00	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:16,371
INFO	2026-06-08 09:01:00	OpticalDuplicateFinder	Large duplicate set. size = 1333
INFO	2026-06-08 09:01:00	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-21,246
INFO	2026-06-08 09:01:00	OpticalDuplicateFinder	Large duplicate set. size = 2075
INFO	2026-06-08 09:01:00	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-21,198
INFO	2026-06-08 09:01:00	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-31,683
INFO	2026-06-08 09:01:00	OpticalDuplicateFinder	Large duplicate set. size = 2545
INFO	2026-06-08 09:01:00	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:12,407
INFO	2026-06-08 09:01:00	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-28,794
INFO	2026-06-08 09:01:00	OpticalDuplicateFinder	Large duplicate set. size = 1261
INFO	2026-06-08 09:01:00	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-15,818
INFO	2026-06-08 09:01:00	OpticalDuplicateFinder	Large duplicate set. size = 1038
INFO	2026-06-08 09:01:00	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:12,261
INFO	2026-06-08 09:01:00	OpticalDuplicateFinder	Large duplicate set. size = 1444
INFO	2026-06-08 09:01:00	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-24,191
INFO	2026-06-08 09:01:00	OpticalDuplicateFinder	Large duplicate set. size = 1172
INFO	2026-06-08 09:01:00	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:7,990
INFO	2026-06-08 09:01:00	OpticalDuplicateFinder	Large duplicate set. size = 1932
INFO	2026-06-08 09:01:00	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:24,218
INFO	2026-06-08 09:01:00	OpticalDuplicateFinder	Large duplicate set. size = 2823
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:10,142
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-30,477
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	Large duplicate set. size = 3673
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:13,839
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-16,991
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	compared         3,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:3,621
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	Large duplicate set. size = 1772
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-26,756
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	Large duplicate set. size = 1032
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-22,606
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	Large duplicate set. size = 1274
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:2,934
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	Large duplicate set. size = 2773
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:21,209
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:16,703
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	Large duplicate set. size = 1156
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:12,229
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	Large duplicate set. size = 1200
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:21,193
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	Large duplicate set. size = 3238
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-14,346
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:17,868
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	compared         3,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:2,173
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	Large duplicate set. size = 1338
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:20,165
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	Large duplicate set. size = 1889
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:9,923
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	Large duplicate set. size = 1304
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:9,001
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	Large duplicate set. size = 1089
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-23,188
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	Large duplicate set. size = 1556
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-13,440
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	Large duplicate set. size = 2410
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:28,288
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:6,356
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	Large duplicate set. size = 1146
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-14,750
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	Large duplicate set. size = 2752
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:26,888
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-23,277
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	Large duplicate set. size = 1176
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:1,663
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	Large duplicate set. size = 2301
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-21,772
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:21,662
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	Large duplicate set. size = 2793
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-17,048
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-17,234
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	Large duplicate set. size = 1972
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-17,363
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	Large duplicate set. size = 1015
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:8,580
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	Large duplicate set. size = 2760
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-16,182
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:4,406
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	Large duplicate set. size = 1014
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-31,488
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	Large duplicate set. size = 1214
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:14,648
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	Large duplicate set. size = 1363
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:22,163
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	Large duplicate set. size = 1274
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-17,290
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	Large duplicate set. size = 1227
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:3,087
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	Large duplicate set. size = 1400
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:14,988
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	Large duplicate set. size = 1097
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:29,331
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	Large duplicate set. size = 1444
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-17,905
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	Large duplicate set. size = 1010
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-13,893
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	Large duplicate set. size = 1608
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:15,530
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	Large duplicate set. size = 1148
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-29,458
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	Large duplicate set. size = 1155
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-32,087
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	Large duplicate set. size = 1038
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-14,880
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	Large duplicate set. size = 1318
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:20,003
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	Large duplicate set. size = 1173
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-25,211
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	Large duplicate set. size = 1336
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:5,344
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	Large duplicate set. size = 1377
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-31,116
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	Large duplicate set. size = 2007
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:13,248
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-28,624
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	Large duplicate set. size = 2288
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:29,396
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:17,099
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	Large duplicate set. size = 1012
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-17,274
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	Large duplicate set. size = 2053
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-23,358
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:29,525
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	Large duplicate set. size = 2696
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:15,497
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:9,956
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	Large duplicate set. size = 2084
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:25,715
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:10,384
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	Large duplicate set. size = 2583
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:31,750
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-15,211
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	Large duplicate set. size = 1350
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-19,685
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	Large duplicate set. size = 2589
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-24,790
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-32,200
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	Large duplicate set. size = 1792
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:9,770
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	Large duplicate set. size = 1707
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-21,343
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	Large duplicate set. size = 1634
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-30,178
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	Large duplicate set. size = 2441
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:8,629
INFO	2026-06-08 09:01:01	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-24,766
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	Large duplicate set. size = 1289
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-27,799
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	Large duplicate set. size = 4138
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:30,739
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:3,985
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	compared         3,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:16,161
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	compared         4,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-30,671
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	Large duplicate set. size = 1163
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-18,439
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	Large duplicate set. size = 1728
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:10,506
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	Large duplicate set. size = 1846
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:3,395
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	Large duplicate set. size = 4387
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-21,530
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:6,946
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	compared         3,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:4,317
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	compared         4,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:16,719
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	Large duplicate set. size = 1921
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-28,099
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	Large duplicate set. size = 4088
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:4,171
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-29,482
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	compared         3,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:4,196
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	compared         4,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:18,717
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	Large duplicate set. size = 5196
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-17,201
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:23,053
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	compared         3,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:14,308
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	compared         4,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:24,380
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	compared         5,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-28,171
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	Large duplicate set. size = 1314
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:29,412
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	Large duplicate set. size = 3845
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:2,003
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:13,135
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	compared         3,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:4,301
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	Large duplicate set. size = 1774
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:16,565
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	Large duplicate set. size = 1009
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-16,943
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	Large duplicate set. size = 5043
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-23,528
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-21,198
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	compared         3,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:20,465
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	compared         4,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-29,167
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	compared         5,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:3,233
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	Large duplicate set. size = 1434
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:22,576
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	Large duplicate set. size = 1167
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-26,715
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	Large duplicate set. size = 1343
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:17,593
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	Large duplicate set. size = 1221
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:21,217
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	Large duplicate set. size = 1356
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:8,588
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	Large duplicate set. size = 1320
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:28,466
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	Large duplicate set. size = 1804
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:30,310
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	Large duplicate set. size = 1178
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-21,554
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	Large duplicate set. size = 1740
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:12,407
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	Large duplicate set. size = 1055
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:13,264
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	Large duplicate set. size = 1179
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:15,004
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	Large duplicate set. size = 1309
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:12,188
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	Large duplicate set. size = 1403
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:4,794
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	Large duplicate set. size = 1381
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-29,514
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	Large duplicate set. size = 1864
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:9,834
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	Large duplicate set. size = 1355
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:18,660
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	Large duplicate set. size = 2048
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-14,750
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:14,543
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	Large duplicate set. size = 1041
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:6,089
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	Large duplicate set. size = 1276
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:31,564
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	Large duplicate set. size = 1373
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:23,118
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	Large duplicate set. size = 2987
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:1,841
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-24,596
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	Large duplicate set. size = 1196
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:16,889
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	Large duplicate set. size = 4093
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:31,168
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:16,711
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	compared         3,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-16,991
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	compared         4,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-16,417
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	Large duplicate set. size = 1317
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-23,940
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	Large duplicate set. size = 1208
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:31,378
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	Large duplicate set. size = 1626
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:28,296
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	Large duplicate set. size = 1035
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-29,053
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	Large duplicate set. size = 2147
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-23,164
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-26,262
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	Large duplicate set. size = 1907
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-32,613
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	Large duplicate set. size = 1510
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-23,859
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	Large duplicate set. size = 1049
INFO	2026-06-08 09:01:02	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:1,801
INFO	2026-06-08 09:01:03	OpticalDuplicateFinder	Large duplicate set. size = 1264
INFO	2026-06-08 09:01:03	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-19,725
INFO	2026-06-08 09:01:03	OpticalDuplicateFinder	Large duplicate set. size = 1048
INFO	2026-06-08 09:01:03	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:18,369
INFO	2026-06-08 09:01:03	OpticalDuplicateFinder	Large duplicate set. size = 1539
INFO	2026-06-08 09:01:03	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-19,507
INFO	2026-06-08 09:01:03	OpticalDuplicateFinder	Large duplicate set. size = 1031
INFO	2026-06-08 09:01:03	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-15,260
INFO	2026-06-08 09:01:03	OpticalDuplicateFinder	Large duplicate set. size = 1131
INFO	2026-06-08 09:01:03	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:10,506
INFO	2026-06-08 09:01:03	OpticalDuplicateFinder	Large duplicate set. size = 2313
INFO	2026-06-08 09:01:03	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:15,182
INFO	2026-06-08 09:01:03	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:30,197
INFO	2026-06-08 09:01:03	OpticalDuplicateFinder	Large duplicate set. size = 1333
INFO	2026-06-08 09:01:03	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-22,864
INFO	2026-06-08 09:01:03	OpticalDuplicateFinder	Large duplicate set. size = 1228
INFO	2026-06-08 09:01:03	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:14,486
INFO	2026-06-08 09:01:03	OpticalDuplicateFinder	Large duplicate set. size = 1464
INFO	2026-06-08 09:01:03	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:29,639
INFO	2026-06-08 09:01:03	OpticalDuplicateFinder	Large duplicate set. size = 1422
INFO	2026-06-08 09:01:03	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:3,411
INFO	2026-06-08 09:01:03	OpticalDuplicateFinder	Large duplicate set. size = 1811
INFO	2026-06-08 09:01:03	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:6,428
INFO	2026-06-08 09:01:03	OpticalDuplicateFinder	Large duplicate set. size = 1015
INFO	2026-06-08 09:01:03	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-16,765
INFO	2026-06-08 09:01:03	OpticalDuplicateFinder	Large duplicate set. size = 1151
INFO	2026-06-08 09:01:03	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:9,155
INFO	2026-06-08 09:01:03	OpticalDuplicateFinder	Large duplicate set. size = 1630
INFO	2026-06-08 09:01:03	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:8,313
INFO	2026-06-08 09:01:03	OpticalDuplicateFinder	Large duplicate set. size = 2202
INFO	2026-06-08 09:01:03	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:26,006
INFO	2026-06-08 09:01:03	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:19,041
INFO	2026-06-08 09:01:03	OpticalDuplicateFinder	Large duplicate set. size = 1277
INFO	2026-06-08 09:01:03	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:32,753
INFO	2026-06-08 09:01:03	OpticalDuplicateFinder	Large duplicate set. size = 1344
INFO	2026-06-08 09:01:03	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-29,976
INFO	2026-06-08 09:01:03	OpticalDuplicateFinder	Large duplicate set. size = 1044
INFO	2026-06-08 09:01:03	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:5,490
INFO	2026-06-08 09:01:03	OpticalDuplicateFinder	Large duplicate set. size = 2077
INFO	2026-06-08 09:01:03	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:20,392
INFO	2026-06-08 09:01:03	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:8,127
INFO	2026-06-08 09:01:03	OpticalDuplicateFinder	Large duplicate set. size = 1299
INFO	2026-06-08 09:01:03	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:19,437
INFO	2026-06-08 09:01:03	OpticalDuplicateFinder	Large duplicate set. size = 1244
INFO	2026-06-08 09:01:03	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:24,679
INFO	2026-06-08 09:01:03	OpticalDuplicateFinder	Large duplicate set. size = 1127
INFO	2026-06-08 09:01:03	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:3,912
INFO	2026-06-08 09:01:03	OpticalDuplicateFinder	Large duplicate set. size = 2157
INFO	2026-06-08 09:01:03	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-31,707
INFO	2026-06-08 09:01:03	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:2,812
INFO	2026-06-08 09:01:03	OpticalDuplicateFinder	Large duplicate set. size = 1185
INFO	2026-06-08 09:01:03	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:15,012
INFO	2026-06-08 09:01:03	OpticalDuplicateFinder	Large duplicate set. size = 1503
INFO	2026-06-08 09:01:03	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-29,256
INFO	2026-06-08 09:01:03	OpticalDuplicateFinder	Large duplicate set. size = 1045
INFO	2026-06-08 09:01:03	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:22,584
INFO	2026-06-08 09:01:03	OpticalDuplicateFinder	Large duplicate set. size = 1057
INFO	2026-06-08 09:01:03	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:7,828
INFO	2026-06-08 09:01:04	OpticalDuplicateFinder	Large duplicate set. size = 1162
INFO	2026-06-08 09:01:04	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:30,666
INFO	2026-06-08 09:01:04	OpticalDuplicateFinder	Large duplicate set. size = 1526
INFO	2026-06-08 09:01:04	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-28,285
INFO	2026-06-08 09:01:04	OpticalDuplicateFinder	Large duplicate set. size = 1086
INFO	2026-06-08 09:01:04	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:17,002
INFO	2026-06-08 09:01:04	OpticalDuplicateFinder	Large duplicate set. size = 1036
INFO	2026-06-08 09:01:04	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:12,674
INFO	2026-06-08 09:01:04	OpticalDuplicateFinder	Large duplicate set. size = 1559
INFO	2026-06-08 09:01:04	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:26,386
INFO	2026-06-08 09:01:04	OpticalDuplicateFinder	Large duplicate set. size = 1200
INFO	2026-06-08 09:01:04	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-24,167
INFO	2026-06-08 09:01:04	OpticalDuplicateFinder	Large duplicate set. size = 1950
INFO	2026-06-08 09:01:04	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-30,615
INFO	2026-06-08 09:01:04	OpticalDuplicateFinder	Large duplicate set. size = 1068
INFO	2026-06-08 09:01:04	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:3,265
INFO	2026-06-08 09:01:04	OpticalDuplicateFinder	Large duplicate set. size = 1045
INFO	2026-06-08 09:01:04	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:2,205
INFO	2026-06-08 09:01:04	OpticalDuplicateFinder	Large duplicate set. size = 1180
INFO	2026-06-08 09:01:04	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-25,647
INFO	2026-06-08 09:01:04	OpticalDuplicateFinder	Large duplicate set. size = 1237
INFO	2026-06-08 09:01:04	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:13,386
INFO	2026-06-08 09:01:04	OpticalDuplicateFinder	Large duplicate set. size = 1113
INFO	2026-06-08 09:01:04	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-28,374
INFO	2026-06-08 09:01:04	OpticalDuplicateFinder	Large duplicate set. size = 1257
INFO	2026-06-08 09:01:04	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:21,338
INFO	2026-06-08 09:01:04	OpticalDuplicateFinder	Large duplicate set. size = 1602
INFO	2026-06-08 09:01:04	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:16,703
INFO	2026-06-08 09:01:04	OpticalDuplicateFinder	Large duplicate set. size = 1329
INFO	2026-06-08 09:01:04	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:9,503
INFO	2026-06-08 09:01:16	MarkDuplicates	Traversing fragment information and detecting duplicates.
WARNING	2026-06-08 09:01:16	SortingCollection	There is not enough memory per file for buffering. Reading will be unbuffered.
INFO	2026-06-08 09:02:14	MarkDuplicates	Sorting list of duplicate records.
INFO	2026-06-08 09:02:17	MarkDuplicates	After generateDuplicateIndexes freeMemory: 203792040; totalMemory: 234881024; maxMemory: 63585648640
INFO	2026-06-08 09:02:17	MarkDuplicates	Marking 324848142 records as duplicates.
INFO	2026-06-08 09:02:17	MarkDuplicates	Found 28102574 optical duplicate clusters.
INFO	2026-06-08 09:02:17	MarkDuplicates	Reads are assumed to be ordered by: coordinate
INFO	2026-06-08 09:02:33	MarkDuplicates	Written    10,000,000 records.  Elapsed time: 00:00:16s.  Time for last 10,000,000:   16s.  Last read position: chr1:27,364,266
INFO	2026-06-08 09:02:49	MarkDuplicates	Written    20,000,000 records.  Elapsed time: 00:00:31s.  Time for last 10,000,000:   15s.  Last read position: chr1:46,716,317
INFO	2026-06-08 09:03:04	MarkDuplicates	Written    30,000,000 records.  Elapsed time: 00:00:46s.  Time for last 10,000,000:   15s.  Last read position: chr1:116,616,360
INFO	2026-06-08 09:03:19	MarkDuplicates	Written    40,000,000 records.  Elapsed time: 00:01:02s.  Time for last 10,000,000:   15s.  Last read position: chr1:155,062,265
INFO	2026-06-08 09:03:35	MarkDuplicates	Written    50,000,000 records.  Elapsed time: 00:01:17s.  Time for last 10,000,000:   15s.  Last read position: chr1:186,341,084
INFO	2026-06-08 09:03:51	MarkDuplicates	Written    60,000,000 records.  Elapsed time: 00:01:33s.  Time for last 10,000,000:   15s.  Last read position: chr1:241,633,816
INFO	2026-06-08 09:04:06	MarkDuplicates	Written    70,000,000 records.  Elapsed time: 00:01:48s.  Time for last 10,000,000:   14s.  Last read position: chr2:32,916,406
INFO	2026-06-08 09:04:21	MarkDuplicates	Written    80,000,000 records.  Elapsed time: 00:02:03s.  Time for last 10,000,000:   15s.  Last read position: chr2:108,496,987
INFO	2026-06-08 09:04:36	MarkDuplicates	Written    90,000,000 records.  Elapsed time: 00:02:19s.  Time for last 10,000,000:   15s.  Last read position: chr2:189,010,791
INFO	2026-06-08 09:04:52	MarkDuplicates	Written   100,000,000 records.  Elapsed time: 00:02:34s.  Time for last 10,000,000:   15s.  Last read position: chr2:215,375,270
INFO	2026-06-08 09:05:07	MarkDuplicates	Written   110,000,000 records.  Elapsed time: 00:02:49s.  Time for last 10,000,000:   14s.  Last read position: chr2:215,397,744
INFO	2026-06-08 09:05:22	MarkDuplicates	Written   120,000,000 records.  Elapsed time: 00:03:04s.  Time for last 10,000,000:   14s.  Last read position: chr2:215,428,319
INFO	2026-06-08 09:05:38	MarkDuplicates	Written   130,000,000 records.  Elapsed time: 00:03:20s.  Time for last 10,000,000:   15s.  Last read position: chr3:12,618,560
INFO	2026-06-08 09:05:53	MarkDuplicates	Written   140,000,000 records.  Elapsed time: 00:03:36s.  Time for last 10,000,000:   15s.  Last read position: chr3:52,488,122
INFO	2026-06-08 09:06:09	MarkDuplicates	Written   150,000,000 records.  Elapsed time: 00:03:51s.  Time for last 10,000,000:   15s.  Last read position: chr3:142,689,805
INFO	2026-06-08 09:06:26	MarkDuplicates	Written   160,000,000 records.  Elapsed time: 00:04:08s.  Time for last 10,000,000:   16s.  Last read position: chr4:26,430,716
INFO	2026-06-08 09:06:42	MarkDuplicates	Written   170,000,000 records.  Elapsed time: 00:04:25s.  Time for last 10,000,000:   16s.  Last read position: chr4:183,322,077
INFO	2026-06-08 09:06:58	MarkDuplicates	Written   180,000,000 records.  Elapsed time: 00:04:40s.  Time for last 10,000,000:   15s.  Last read position: chr5:83,537,762
INFO	2026-06-08 09:07:13	MarkDuplicates	Written   190,000,000 records.  Elapsed time: 00:04:55s.  Time for last 10,000,000:   15s.  Last read position: chr5:151,664,125
INFO	2026-06-08 09:07:28	MarkDuplicates	Written   200,000,000 records.  Elapsed time: 00:05:10s.  Time for last 10,000,000:   15s.  Last read position: chr6:30,685,843
INFO	2026-06-08 09:07:43	MarkDuplicates	Written   210,000,000 records.  Elapsed time: 00:05:26s.  Time for last 10,000,000:   15s.  Last read position: chr6:43,516,747
INFO	2026-06-08 09:07:59	MarkDuplicates	Written   220,000,000 records.  Elapsed time: 00:05:41s.  Time for last 10,000,000:   15s.  Last read position: chr6:149,683,443
INFO	2026-06-08 09:08:14	MarkDuplicates	Written   230,000,000 records.  Elapsed time: 00:05:56s.  Time for last 10,000,000:   15s.  Last read position: chr7:35,832,888
INFO	2026-06-08 09:08:29	MarkDuplicates	Written   240,000,000 records.  Elapsed time: 00:06:11s.  Time for last 10,000,000:   15s.  Last read position: chr7:94,416,458
INFO	2026-06-08 09:08:44	MarkDuplicates	Written   250,000,000 records.  Elapsed time: 00:06:26s.  Time for last 10,000,000:   15s.  Last read position: chr7:139,716,873
INFO	2026-06-08 09:08:59	MarkDuplicates	Written   260,000,000 records.  Elapsed time: 00:06:42s.  Time for last 10,000,000:   15s.  Last read position: chr8:52,642,434
INFO	2026-06-08 09:09:14	MarkDuplicates	Written   270,000,000 records.  Elapsed time: 00:06:57s.  Time for last 10,000,000:   15s.  Last read position: chr8:108,239,992
INFO	2026-06-08 09:09:29	MarkDuplicates	Written   280,000,000 records.  Elapsed time: 00:07:11s.  Time for last 10,000,000:   14s.  Last read position: chr8:143,860,723
INFO	2026-06-08 09:09:44	MarkDuplicates	Written   290,000,000 records.  Elapsed time: 00:07:26s.  Time for last 10,000,000:   14s.  Last read position: chr8:144,436,844
INFO	2026-06-08 09:10:00	MarkDuplicates	Written   300,000,000 records.  Elapsed time: 00:07:42s.  Time for last 10,000,000:   16s.  Last read position: chr9:114,093,377
INFO	2026-06-08 09:10:15	MarkDuplicates	Written   310,000,000 records.  Elapsed time: 00:07:57s.  Time for last 10,000,000:   15s.  Last read position: chr9:137,040,376
INFO	2026-06-08 09:10:30	MarkDuplicates	Written   320,000,000 records.  Elapsed time: 00:08:13s.  Time for last 10,000,000:   15s.  Last read position: chr10:63,343,745
INFO	2026-06-08 09:10:47	MarkDuplicates	Written   330,000,000 records.  Elapsed time: 00:08:29s.  Time for last 10,000,000:   16s.  Last read position: chr10:119,651,762
INFO	2026-06-08 09:11:02	MarkDuplicates	Written   340,000,000 records.  Elapsed time: 00:08:44s.  Time for last 10,000,000:   15s.  Last read position: chr11:1,245,276
INFO	2026-06-08 09:11:17	MarkDuplicates	Written   350,000,000 records.  Elapsed time: 00:09:00s.  Time for last 10,000,000:   15s.  Last read position: chr11:33,706,458
INFO	2026-06-08 09:11:34	MarkDuplicates	Written   360,000,000 records.  Elapsed time: 00:09:17s.  Time for last 10,000,000:   17s.  Last read position: chr11:62,786,274
INFO	2026-06-08 09:11:51	MarkDuplicates	Written   370,000,000 records.  Elapsed time: 00:09:33s.  Time for last 10,000,000:   16s.  Last read position: chr11:95,836,207
INFO	2026-06-08 09:12:08	MarkDuplicates	Written   380,000,000 records.  Elapsed time: 00:09:50s.  Time for last 10,000,000:   16s.  Last read position: chr12:6,867,590
INFO	2026-06-08 09:12:25	MarkDuplicates	Written   390,000,000 records.  Elapsed time: 00:10:08s.  Time for last 10,000,000:   17s.  Last read position: chr12:54,282,462
INFO	2026-06-08 09:12:42	MarkDuplicates	Written   400,000,000 records.  Elapsed time: 00:10:24s.  Time for last 10,000,000:   16s.  Last read position: chr12:105,121,122
INFO	2026-06-08 09:12:59	MarkDuplicates	Written   410,000,000 records.  Elapsed time: 00:10:41s.  Time for last 10,000,000:   16s.  Last read position: chr13:20,002,956
INFO	2026-06-08 09:13:16	MarkDuplicates	Written   420,000,000 records.  Elapsed time: 00:10:59s.  Time for last 10,000,000:   17s.  Last read position: chr14:23,560,322
INFO	2026-06-08 09:13:32	MarkDuplicates	Written   430,000,000 records.  Elapsed time: 00:11:14s.  Time for last 10,000,000:   15s.  Last read position: chr14:88,426,591
INFO	2026-06-08 09:13:49	MarkDuplicates	Written   440,000,000 records.  Elapsed time: 00:11:31s.  Time for last 10,000,000:   17s.  Last read position: chr15:42,444,884
INFO	2026-06-08 09:14:05	MarkDuplicates	Written   450,000,000 records.  Elapsed time: 00:11:47s.  Time for last 10,000,000:   16s.  Last read position: chr15:87,074,034
INFO	2026-06-08 09:14:21	MarkDuplicates	Written   460,000,000 records.  Elapsed time: 00:12:03s.  Time for last 10,000,000:   15s.  Last read position: chr16:14,875,245
INFO	2026-06-08 09:14:37	MarkDuplicates	Written   470,000,000 records.  Elapsed time: 00:12:20s.  Time for last 10,000,000:   16s.  Last read position: chr16:29,382,296
INFO	2026-06-08 09:14:55	MarkDuplicates	Written   480,000,000 records.  Elapsed time: 00:12:37s.  Time for last 10,000,000:   17s.  Last read position: chr16:82,148,745
INFO	2026-06-08 09:15:13	MarkDuplicates	Written   490,000,000 records.  Elapsed time: 00:12:55s.  Time for last 10,000,000:   18s.  Last read position: chr17:27,752,858
INFO	2026-06-08 09:15:29	MarkDuplicates	Written   500,000,000 records.  Elapsed time: 00:13:11s.  Time for last 10,000,000:   15s.  Last read position: chr17:42,782,799
INFO	2026-06-08 09:15:45	MarkDuplicates	Written   510,000,000 records.  Elapsed time: 00:13:27s.  Time for last 10,000,000:   15s.  Last read position: chr17:50,188,568
INFO	2026-06-08 09:16:00	MarkDuplicates	Written   520,000,000 records.  Elapsed time: 00:13:43s.  Time for last 10,000,000:   15s.  Last read position: chr17:50,194,129
INFO	2026-06-08 09:16:16	MarkDuplicates	Written   530,000,000 records.  Elapsed time: 00:13:59s.  Time for last 10,000,000:   15s.  Last read position: chr17:50,199,269
INFO	2026-06-08 09:16:32	MarkDuplicates	Written   540,000,000 records.  Elapsed time: 00:14:14s.  Time for last 10,000,000:   15s.  Last read position: chr17:67,874,848
INFO	2026-06-08 09:16:47	MarkDuplicates	Written   550,000,000 records.  Elapsed time: 00:14:29s.  Time for last 10,000,000:   15s.  Last read position: chr18:49,490,477
INFO	2026-06-08 09:17:02	MarkDuplicates	Written   560,000,000 records.  Elapsed time: 00:14:44s.  Time for last 10,000,000:   15s.  Last read position: chr19:11,194,483
INFO	2026-06-08 09:17:20	MarkDuplicates	Written   570,000,000 records.  Elapsed time: 00:15:02s.  Time for last 10,000,000:   17s.  Last read position: chr19:36,973,726
INFO	2026-06-08 09:17:35	MarkDuplicates	Written   580,000,000 records.  Elapsed time: 00:15:17s.  Time for last 10,000,000:   15s.  Last read position: chr19:50,725,399
INFO	2026-06-08 09:17:50	MarkDuplicates	Written   590,000,000 records.  Elapsed time: 00:15:32s.  Time for last 10,000,000:   15s.  Last read position: chr20:36,912,437
INFO	2026-06-08 09:18:07	MarkDuplicates	Written   600,000,000 records.  Elapsed time: 00:15:49s.  Time for last 10,000,000:   16s.  Last read position: chr21:34,669,569
INFO	2026-06-08 09:18:24	MarkDuplicates	Written   610,000,000 records.  Elapsed time: 00:16:06s.  Time for last 10,000,000:   16s.  Last read position: chr22:29,299,798
INFO	2026-06-08 09:18:44	MarkDuplicates	Written   620,000,000 records.  Elapsed time: 00:16:27s.  Time for last 10,000,000:   20s.  Last read position: chrX:21,940,807
INFO	2026-06-08 09:18:59	MarkDuplicates	Written   630,000,000 records.  Elapsed time: 00:16:42s.  Time for last 10,000,000:   15s.  Last read position: chrX:153,508,326
INFO	2026-06-08 09:19:16	MarkDuplicates	Writing complete. Closing input iterator.
INFO	2026-06-08 09:19:16	MarkDuplicates	Duplicate Index cleanup.
INFO	2026-06-08 09:19:16	MarkDuplicates	Getting Memory Stats.
INFO	2026-06-08 09:19:16	MarkDuplicates	Before output close freeMemory: 203737136; totalMemory: 234881024; maxMemory: 63585648640
INFO	2026-06-08 09:19:16	MarkDuplicates	Closed outputs. Getting more Memory Stats.
INFO	2026-06-08 09:19:16	MarkDuplicates	After output close freeMemory: 103991280; totalMemory: 134217728; maxMemory: 63585648640
[Mon Jun 08 09:19:16 GMT 2026] picard.sam.markduplicates.MarkDuplicates done. Elapsed time: 41.14 minutes.
Runtime.totalMemory()=134217728
ls: *cram: No such file or directory
ls: *.crai: No such file or directory