Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir/ref_genome.fa Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/67/e00c42f8a68df19dbf51d6f8de308b/.command.sh Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4e/ffd79a928055941e334b80b2b6d101/aih-tih-sc-1ba302-R1_B23WHYVLT4_1.Aligned.sortedByCoord.out.bam Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/67/e00c42f8a68df19dbf51d6f8de308b/.command.run Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir/ref_genome.fa.fai ==> STAGING COMPLETE (5 inputs) Using GATK jar /usr/local/share/gatk4-4.4.0.0-0/gatk-package-4.4.0.0-local.jar Running: java -Dsamjdk.use_async_io_read_samtools=false -Dsamjdk.use_async_io_write_samtools=true -Dsamjdk.use_async_io_write_tribble=false -Dsamjdk.compression_level=2 -Xmx60620M -XX:-UsePerfData -XX:ParallelGCThreads=2 -jar /usr/local/share/gatk4-4.4.0.0-0/gatk-package-4.4.0.0-local.jar MarkDuplicates --INPUT aih-tih-sc-1ba302-R1_B23WHYVLT4_1.Aligned.sortedByCoord.out.bam --OUTPUT aih-tih-sc-1ba302-R1_B23WHYVLT4_1.md.bam --METRICS_FILE aih-tih-sc-1ba302-R1_B23WHYVLT4_1.md.bam.metrics --TMP_DIR . --CREATE_INDEX true --REFERENCE_SEQUENCE ref_genome.fa -REMOVE_DUPLICATES false -VALIDATION_STRINGENCY LENIENT 08:38:08.625 INFO NativeLibraryLoader - Loading libgkl_compression.so from jar:file:/usr/local/share/gatk4-4.4.0.0-0/gatk-package-4.4.0.0-local.jar!/com/intel/gkl/native/libgkl_compression.so [Mon Jun 08 08:38:08 GMT 2026] MarkDuplicates --INPUT aih-tih-sc-1ba302-R1_B23WHYVLT4_1.Aligned.sortedByCoord.out.bam --OUTPUT aih-tih-sc-1ba302-R1_B23WHYVLT4_1.md.bam --METRICS_FILE aih-tih-sc-1ba302-R1_B23WHYVLT4_1.md.bam.metrics --REMOVE_DUPLICATES false --TMP_DIR . --VALIDATION_STRINGENCY LENIENT --CREATE_INDEX true --REFERENCE_SEQUENCE ref_genome.fa --MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP 50000 --MAX_FILE_HANDLES_FOR_READ_ENDS_MAP 8000 --SORTING_COLLECTION_SIZE_RATIO 0.25 --TAG_DUPLICATE_SET_MEMBERS false --REMOVE_SEQUENCING_DUPLICATES false --TAGGING_POLICY DontTag --CLEAR_DT true --DUPLEX_UMI false --FLOW_MODE false --FLOW_QUALITY_SUM_STRATEGY false --USE_END_IN_UNPAIRED_READS false --USE_UNPAIRED_CLIPPED_END false --UNPAIRED_END_UNCERTAINTY 0 --FLOW_SKIP_FIRST_N_FLOWS 0 --FLOW_Q_IS_KNOWN_END false --FLOW_EFFECTIVE_QUALITY_THRESHOLD 15 --ADD_PG_TAG_TO_READS true --ASSUME_SORTED false --DUPLICATE_SCORING_STRATEGY SUM_OF_BASE_QUALITIES --PROGRAM_RECORD_ID MarkDuplicates --PROGRAM_GROUP_NAME MarkDuplicates --READ_NAME_REGEX --OPTICAL_DUPLICATE_PIXEL_DISTANCE 100 --MAX_OPTICAL_DUPLICATE_SET_SIZE 300000 --VERBOSITY INFO --QUIET false --COMPRESSION_LEVEL 2 --MAX_RECORDS_IN_RAM 500000 --CREATE_MD5_FILE false --help false --version false --showHidden false --USE_JDK_DEFLATER false --USE_JDK_INFLATER false [Mon Jun 08 08:38:08 GMT 2026] Executing as ?@nf-67e00c42f8a68df19dbf51d6f8de308b-257c8-x6zxx on Linux 6.12.88 amd64; OpenJDK 64-Bit Server VM 17.0.3-internal+0-adhoc..src; Deflater: Intel; Inflater: Intel; Provider GCS is available; Picard version: Version:4.4.0.0 INFO 2026-06-08 08:38:08 MarkDuplicates Start of doWork freeMemory: 105826080; totalMemory: 134217728; maxMemory: 63585648640 INFO 2026-06-08 08:38:08 MarkDuplicates Reading input file and constructing read end information. INFO 2026-06-08 08:38:08 MarkDuplicates Will retain up to 230382784 data points before spilling to disk. INFO 2026-06-08 08:38:12 MarkDuplicates Read 1,000,000 records. Elapsed time: 00:00:02s. Time for last 1,000,000: 2s. Last read position: chr1:1,339,398 INFO 2026-06-08 08:38:12 MarkDuplicates Tracking 3750 as yet unmatched pairs. 621 records in RAM. INFO 2026-06-08 08:38:14 MarkDuplicates Read 2,000,000 records. Elapsed time: 00:00:04s. Time for last 1,000,000: 2s. Last read position: chr1:2,306,582 INFO 2026-06-08 08:38:14 MarkDuplicates Tracking 6684 as yet unmatched pairs. 348 records in RAM. INFO 2026-06-08 08:38:16 MarkDuplicates Read 3,000,000 records. Elapsed time: 00:00:06s. Time for last 1,000,000: 2s. Last read position: chr1:8,465,925 INFO 2026-06-08 08:38:16 MarkDuplicates Tracking 9582 as yet unmatched pairs. 238 records in RAM. INFO 2026-06-08 08:38:18 MarkDuplicates Read 4,000,000 records. Elapsed time: 00:00:08s. Time for last 1,000,000: 1s. Last read position: chr1:11,150,175 INFO 2026-06-08 08:38:18 MarkDuplicates Tracking 12163 as yet unmatched pairs. 148 records in RAM. INFO 2026-06-08 08:38:19 MarkDuplicates Read 5,000,000 records. Elapsed time: 00:00:09s. Time for last 1,000,000: 1s. Last read position: chr1:15,930,404 INFO 2026-06-08 08:38:19 MarkDuplicates Tracking 15386 as yet unmatched pairs. 632 records in RAM. INFO 2026-06-08 08:38:22 MarkDuplicates Read 6,000,000 records. Elapsed time: 00:00:12s. Time for last 1,000,000: 2s. Last read position: chr1:19,127,656 INFO 2026-06-08 08:38:22 MarkDuplicates Tracking 17425 as yet unmatched pairs. 182 records in RAM. INFO 2026-06-08 08:38:23 MarkDuplicates Read 7,000,000 records. Elapsed time: 00:00:13s. Time for last 1,000,000: 1s. Last read position: chr1:21,689,974 INFO 2026-06-08 08:38:23 MarkDuplicates Tracking 20217 as yet unmatched pairs. 326 records in RAM. INFO 2026-06-08 08:38:25 MarkDuplicates Read 8,000,000 records. Elapsed time: 00:00:15s. Time for last 1,000,000: 1s. Last read position: chr1:22,120,390 INFO 2026-06-08 08:38:25 MarkDuplicates Tracking 23043 as yet unmatched pairs. 78 records in RAM. INFO 2026-06-08 08:38:27 MarkDuplicates Read 9,000,000 records. Elapsed time: 00:00:17s. Time for last 1,000,000: 1s. Last read position: chr1:24,651,439 INFO 2026-06-08 08:38:27 MarkDuplicates Tracking 26205 as yet unmatched pairs. 610 records in RAM. INFO 2026-06-08 08:38:28 MarkDuplicates Read 10,000,000 records. Elapsed time: 00:00:18s. Time for last 1,000,000: 1s. Last read position: chr1:27,364,266 INFO 2026-06-08 08:38:28 MarkDuplicates Tracking 28578 as yet unmatched pairs. 372 records in RAM. INFO 2026-06-08 08:38:30 MarkDuplicates Read 11,000,000 records. Elapsed time: 00:00:20s. Time for last 1,000,000: 1s. Last read position: chr1:31,423,712 INFO 2026-06-08 08:38:30 MarkDuplicates Tracking 32108 as yet unmatched pairs. 1179 records in RAM. INFO 2026-06-08 08:38:33 MarkDuplicates Read 12,000,000 records. Elapsed time: 00:00:23s. Time for last 1,000,000: 2s. Last read position: chr1:32,946,544 INFO 2026-06-08 08:38:33 MarkDuplicates Tracking 34028 as yet unmatched pairs. 260 records in RAM. INFO 2026-06-08 08:38:34 MarkDuplicates Read 13,000,000 records. Elapsed time: 00:00:24s. Time for last 1,000,000: 1s. Last read position: chr1:36,322,371 INFO 2026-06-08 08:38:34 MarkDuplicates Tracking 37762 as yet unmatched pairs. 1188 records in RAM. INFO 2026-06-08 08:38:36 MarkDuplicates Read 14,000,000 records. Elapsed time: 00:00:26s. Time for last 1,000,000: 1s. Last read position: chr1:39,334,567 INFO 2026-06-08 08:38:36 MarkDuplicates Tracking 41476 as yet unmatched pairs. 2386 records in RAM. INFO 2026-06-08 08:38:37 MarkDuplicates Read 15,000,000 records. Elapsed time: 00:00:27s. Time for last 1,000,000: 1s. Last read position: chr1:39,485,703 INFO 2026-06-08 08:38:37 MarkDuplicates Tracking 41782 as yet unmatched pairs. 189 records in RAM. INFO 2026-06-08 08:38:39 MarkDuplicates Read 16,000,000 records. Elapsed time: 00:00:29s. Time for last 1,000,000: 1s. Last read position: chr1:40,304,337 INFO 2026-06-08 08:38:39 MarkDuplicates Tracking 44454 as yet unmatched pairs. 310 records in RAM. INFO 2026-06-08 08:38:41 MarkDuplicates Read 17,000,000 records. Elapsed time: 00:00:31s. Time for last 1,000,000: 2s. Last read position: chr1:42,927,205 INFO 2026-06-08 08:38:41 MarkDuplicates Tracking 47505 as yet unmatched pairs. 674 records in RAM. INFO 2026-06-08 08:38:43 MarkDuplicates Read 18,000,000 records. Elapsed time: 00:00:33s. Time for last 1,000,000: 2s. Last read position: chr1:43,619,551 INFO 2026-06-08 08:38:43 MarkDuplicates Tracking 50911 as yet unmatched pairs. 1059 records in RAM. INFO 2026-06-08 08:38:45 MarkDuplicates Read 19,000,000 records. Elapsed time: 00:00:35s. Time for last 1,000,000: 2s. Last read position: chr1:45,013,166 INFO 2026-06-08 08:38:45 MarkDuplicates Tracking 53262 as yet unmatched pairs. 645 records in RAM. INFO 2026-06-08 08:38:47 MarkDuplicates Read 20,000,000 records. Elapsed time: 00:00:37s. Time for last 1,000,000: 1s. Last read position: chr1:46,716,317 INFO 2026-06-08 08:38:47 MarkDuplicates Tracking 56166 as yet unmatched pairs. 974 records in RAM. INFO 2026-06-08 08:38:49 MarkDuplicates Read 21,000,000 records. Elapsed time: 00:00:38s. Time for last 1,000,000: 1s. Last read position: chr1:52,534,220 INFO 2026-06-08 08:38:49 MarkDuplicates Tracking 57905 as yet unmatched pairs. 71 records in RAM. INFO 2026-06-08 08:38:51 MarkDuplicates Read 22,000,000 records. Elapsed time: 00:00:41s. Time for last 1,000,000: 2s. Last read position: chr1:58,689,078 INFO 2026-06-08 08:38:51 MarkDuplicates Tracking 61013 as yet unmatched pairs. 366 records in RAM. INFO 2026-06-08 08:38:52 MarkDuplicates Read 23,000,000 records. Elapsed time: 00:00:42s. Time for last 1,000,000: 1s. Last read position: chr1:64,847,655 INFO 2026-06-08 08:38:52 MarkDuplicates Tracking 63987 as yet unmatched pairs. 803 records in RAM. INFO 2026-06-08 08:38:54 MarkDuplicates Read 24,000,000 records. Elapsed time: 00:00:44s. Time for last 1,000,000: 2s. Last read position: chr1:78,660,565 INFO 2026-06-08 08:38:54 MarkDuplicates Tracking 66104 as yet unmatched pairs. 451 records in RAM. INFO 2026-06-08 08:38:56 MarkDuplicates Read 25,000,000 records. Elapsed time: 00:00:46s. Time for last 1,000,000: 1s. Last read position: chr1:93,258,769 INFO 2026-06-08 08:38:56 MarkDuplicates Tracking 68306 as yet unmatched pairs. 169 records in RAM. INFO 2026-06-08 08:38:58 MarkDuplicates Read 26,000,000 records. Elapsed time: 00:00:48s. Time for last 1,000,000: 1s. Last read position: chr1:102,881,731 INFO 2026-06-08 08:38:58 MarkDuplicates Tracking 72023 as yet unmatched pairs. 1648 records in RAM. INFO 2026-06-08 08:39:00 MarkDuplicates Read 27,000,000 records. Elapsed time: 00:00:50s. Time for last 1,000,000: 1s. Last read position: chr1:109,271,213 INFO 2026-06-08 08:39:00 MarkDuplicates Tracking 73927 as yet unmatched pairs. 829 records in RAM. INFO 2026-06-08 08:39:02 MarkDuplicates Read 28,000,000 records. Elapsed time: 00:00:51s. Time for last 1,000,000: 1s. Last read position: chr1:111,982,262 INFO 2026-06-08 08:39:02 MarkDuplicates Tracking 75776 as yet unmatched pairs. 114 records in RAM. INFO 2026-06-08 08:39:04 MarkDuplicates Read 29,000,000 records. Elapsed time: 00:00:54s. Time for last 1,000,000: 2s. Last read position: chr1:113,683,794 INFO 2026-06-08 08:39:04 MarkDuplicates Tracking 80205 as yet unmatched pairs. 1993 records in RAM. INFO 2026-06-08 08:39:05 MarkDuplicates Read 30,000,000 records. Elapsed time: 00:00:55s. Time for last 1,000,000: 1s. Last read position: chr1:116,616,360 INFO 2026-06-08 08:39:05 MarkDuplicates Tracking 81155 as yet unmatched pairs. 392 records in RAM. INFO 2026-06-08 08:39:07 MarkDuplicates Read 31,000,000 records. Elapsed time: 00:00:57s. Time for last 1,000,000: 1s. Last read position: chr1:119,955,081 INFO 2026-06-08 08:39:07 MarkDuplicates Tracking 85626 as yet unmatched pairs. 2284 records in RAM. INFO 2026-06-08 08:39:09 MarkDuplicates Read 32,000,000 records. Elapsed time: 00:00:59s. Time for last 1,000,000: 1s. Last read position: chr1:144,995,165 INFO 2026-06-08 08:39:09 MarkDuplicates Tracking 85777 as yet unmatched pairs. 696 records in RAM. INFO 2026-06-08 08:39:10 MarkDuplicates Read 33,000,000 records. Elapsed time: 00:01:00s. Time for last 1,000,000: 1s. Last read position: chr1:146,975,701 INFO 2026-06-08 08:39:10 MarkDuplicates Tracking 86809 as yet unmatched pairs. 495 records in RAM. INFO 2026-06-08 08:39:12 MarkDuplicates Read 34,000,000 records. Elapsed time: 00:01:02s. Time for last 1,000,000: 1s. Last read position: chr1:149,016,445 INFO 2026-06-08 08:39:12 MarkDuplicates Tracking 87608 as yet unmatched pairs. 157 records in RAM. INFO 2026-06-08 08:39:13 MarkDuplicates Read 35,000,000 records. Elapsed time: 00:01:03s. Time for last 1,000,000: 1s. Last read position: chr1:149,926,907 INFO 2026-06-08 08:39:13 MarkDuplicates Tracking 89656 as yet unmatched pairs. 754 records in RAM. INFO 2026-06-08 08:39:15 MarkDuplicates Read 36,000,000 records. Elapsed time: 00:01:05s. Time for last 1,000,000: 2s. Last read position: chr1:150,964,297 INFO 2026-06-08 08:39:15 MarkDuplicates Tracking 91890 as yet unmatched pairs. 322 records in RAM. INFO 2026-06-08 08:39:17 MarkDuplicates Read 37,000,000 records. Elapsed time: 00:01:07s. Time for last 1,000,000: 1s. Last read position: chr1:152,215,537 INFO 2026-06-08 08:39:17 MarkDuplicates Tracking 94518 as yet unmatched pairs. 383 records in RAM. INFO 2026-06-08 08:39:18 MarkDuplicates Read 38,000,000 records. Elapsed time: 00:01:08s. Time for last 1,000,000: 1s. Last read position: chr1:154,157,587 INFO 2026-06-08 08:39:18 MarkDuplicates Tracking 102899 as yet unmatched pairs. 6055 records in RAM. INFO 2026-06-08 08:39:20 MarkDuplicates Read 39,000,000 records. Elapsed time: 00:01:10s. Time for last 1,000,000: 1s. Last read position: chr1:154,261,612 INFO 2026-06-08 08:39:20 MarkDuplicates Tracking 100468 as yet unmatched pairs. 1353 records in RAM. INFO 2026-06-08 08:39:22 MarkDuplicates Read 40,000,000 records. Elapsed time: 00:01:12s. Time for last 1,000,000: 2s. Last read position: chr1:155,062,265 INFO 2026-06-08 08:39:22 MarkDuplicates Tracking 102454 as yet unmatched pairs. 678 records in RAM. INFO 2026-06-08 08:39:24 MarkDuplicates Read 41,000,000 records. Elapsed time: 00:01:14s. Time for last 1,000,000: 1s. Last read position: chr1:155,200,589 INFO 2026-06-08 08:39:24 MarkDuplicates Tracking 104180 as yet unmatched pairs. 361 records in RAM. INFO 2026-06-08 08:39:26 MarkDuplicates Read 42,000,000 records. Elapsed time: 00:01:16s. Time for last 1,000,000: 1s. Last read position: chr1:155,753,263 INFO 2026-06-08 08:39:26 MarkDuplicates Tracking 106513 as yet unmatched pairs. 337 records in RAM. INFO 2026-06-08 08:39:28 MarkDuplicates Read 43,000,000 records. Elapsed time: 00:01:18s. Time for last 1,000,000: 1s. Last read position: chr1:156,139,780 INFO 2026-06-08 08:39:28 MarkDuplicates Tracking 110020 as yet unmatched pairs. 630 records in RAM. INFO 2026-06-08 08:39:30 MarkDuplicates Read 44,000,000 records. Elapsed time: 00:01:20s. Time for last 1,000,000: 2s. Last read position: chr1:158,076,225 INFO 2026-06-08 08:39:30 MarkDuplicates Tracking 112442 as yet unmatched pairs. 330 records in RAM. INFO 2026-06-08 08:39:32 MarkDuplicates Read 45,000,000 records. Elapsed time: 00:01:22s. Time for last 1,000,000: 1s. Last read position: chr1:161,158,135 INFO 2026-06-08 08:39:32 MarkDuplicates Tracking 115369 as yet unmatched pairs. 645 records in RAM. INFO 2026-06-08 08:39:33 MarkDuplicates Read 46,000,000 records. Elapsed time: 00:01:23s. Time for last 1,000,000: 1s. Last read position: chr1:162,587,478 INFO 2026-06-08 08:39:33 MarkDuplicates Tracking 117499 as yet unmatched pairs. 475 records in RAM. INFO 2026-06-08 08:39:35 MarkDuplicates Read 47,000,000 records. Elapsed time: 00:01:25s. Time for last 1,000,000: 2s. Last read position: chr1:171,540,169 INFO 2026-06-08 08:39:35 MarkDuplicates Tracking 119919 as yet unmatched pairs. 259 records in RAM. INFO 2026-06-08 08:39:37 MarkDuplicates Read 48,000,000 records. Elapsed time: 00:01:27s. Time for last 1,000,000: 1s. Last read position: chr1:179,095,124 INFO 2026-06-08 08:39:37 MarkDuplicates Tracking 122364 as yet unmatched pairs. 269 records in RAM. INFO 2026-06-08 08:39:38 MarkDuplicates Read 49,000,000 records. Elapsed time: 00:01:28s. Time for last 1,000,000: 1s. Last read position: chr1:183,529,397 INFO 2026-06-08 08:39:38 MarkDuplicates Tracking 124921 as yet unmatched pairs. 267 records in RAM. INFO 2026-06-08 08:39:40 MarkDuplicates Read 50,000,000 records. Elapsed time: 00:01:30s. Time for last 1,000,000: 1s. Last read position: chr1:186,341,084 INFO 2026-06-08 08:39:40 MarkDuplicates Tracking 128150 as yet unmatched pairs. 1236 records in RAM. INFO 2026-06-08 08:39:42 MarkDuplicates Read 51,000,000 records. Elapsed time: 00:01:31s. Time for last 1,000,000: 1s. Last read position: chr1:200,407,628 INFO 2026-06-08 08:39:42 MarkDuplicates Tracking 129643 as yet unmatched pairs. 388 records in RAM. INFO 2026-06-08 08:39:43 MarkDuplicates Read 52,000,000 records. Elapsed time: 00:01:33s. Time for last 1,000,000: 1s. Last read position: chr1:203,007,837 INFO 2026-06-08 08:39:43 MarkDuplicates Tracking 132307 as yet unmatched pairs. 461 records in RAM. INFO 2026-06-08 08:39:45 MarkDuplicates Read 53,000,000 records. Elapsed time: 00:01:35s. Time for last 1,000,000: 1s. Last read position: chr1:204,954,343 INFO 2026-06-08 08:39:45 MarkDuplicates Tracking 134442 as yet unmatched pairs. 55 records in RAM. INFO 2026-06-08 08:39:46 MarkDuplicates Read 54,000,000 records. Elapsed time: 00:01:36s. Time for last 1,000,000: 1s. Last read position: chr1:209,839,089 INFO 2026-06-08 08:39:46 MarkDuplicates Tracking 137111 as yet unmatched pairs. 182 records in RAM. INFO 2026-06-08 08:39:49 MarkDuplicates Read 55,000,000 records. Elapsed time: 00:01:39s. Time for last 1,000,000: 2s. Last read position: chr1:220,102,140 INFO 2026-06-08 08:39:49 MarkDuplicates Tracking 140490 as yet unmatched pairs. 1180 records in RAM. INFO 2026-06-08 08:39:51 MarkDuplicates Read 56,000,000 records. Elapsed time: 00:01:41s. Time for last 1,000,000: 2s. Last read position: chr1:225,080,459 INFO 2026-06-08 08:39:51 MarkDuplicates Tracking 142135 as yet unmatched pairs. 318 records in RAM. INFO 2026-06-08 08:39:53 MarkDuplicates Read 57,000,000 records. Elapsed time: 00:01:43s. Time for last 1,000,000: 2s. Last read position: chr1:226,908,572 INFO 2026-06-08 08:39:53 MarkDuplicates Tracking 144329 as yet unmatched pairs. 69 records in RAM. INFO 2026-06-08 08:39:55 MarkDuplicates Read 58,000,000 records. Elapsed time: 00:01:45s. Time for last 1,000,000: 1s. Last read position: chr1:228,359,915 INFO 2026-06-08 08:39:55 MarkDuplicates Tracking 147626 as yet unmatched pairs. 354 records in RAM. INFO 2026-06-08 08:39:57 MarkDuplicates Read 59,000,000 records. Elapsed time: 00:01:47s. Time for last 1,000,000: 1s. Last read position: chr1:234,373,540 INFO 2026-06-08 08:39:57 MarkDuplicates Tracking 150411 as yet unmatched pairs. 55 records in RAM. INFO 2026-06-08 08:39:58 MarkDuplicates Read 60,000,000 records. Elapsed time: 00:01:48s. Time for last 1,000,000: 1s. Last read position: chr1:241,633,816 INFO 2026-06-08 08:39:58 MarkDuplicates Tracking 153433 as yet unmatched pairs. 360 records in RAM. INFO 2026-06-08 08:40:00 MarkDuplicates Read 61,000,000 records. Elapsed time: 00:01:49s. Time for last 1,000,000: 1s. Last read position: chr1:246,840,921 INFO 2026-06-08 08:40:00 MarkDuplicates Tracking 156190 as yet unmatched pairs. 527 records in RAM. INFO 2026-06-08 08:40:03 MarkDuplicates Read 62,000,000 records. Elapsed time: 00:01:53s. Time for last 1,000,000: 3s. Last read position: chr2:9,400,741 INFO 2026-06-08 08:40:03 MarkDuplicates Tracking 158416 as yet unmatched pairs. 156296 records in RAM. INFO 2026-06-08 08:40:04 MarkDuplicates Read 63,000,000 records. Elapsed time: 00:01:54s. Time for last 1,000,000: 1s. Last read position: chr2:16,561,416 INFO 2026-06-08 08:40:04 MarkDuplicates Tracking 161048 as yet unmatched pairs. 158902 records in RAM. INFO 2026-06-08 08:40:06 MarkDuplicates Read 64,000,000 records. Elapsed time: 00:01:56s. Time for last 1,000,000: 1s. Last read position: chr2:24,822,550 INFO 2026-06-08 08:40:06 MarkDuplicates Tracking 163986 as yet unmatched pairs. 161797 records in RAM. INFO 2026-06-08 08:40:08 MarkDuplicates Read 65,000,000 records. Elapsed time: 00:01:58s. Time for last 1,000,000: 1s. Last read position: chr2:27,440,914 INFO 2026-06-08 08:40:08 MarkDuplicates Tracking 167094 as yet unmatched pairs. 164881 records in RAM. INFO 2026-06-08 08:40:10 MarkDuplicates Read 66,000,000 records. Elapsed time: 00:02:00s. Time for last 1,000,000: 1s. Last read position: chr2:32,916,243 INFO 2026-06-08 08:40:10 MarkDuplicates Tracking 170051 as yet unmatched pairs. 166578 records in RAM. INFO 2026-06-08 08:40:11 MarkDuplicates Read 67,000,000 records. Elapsed time: 00:02:01s. Time for last 1,000,000: 1s. Last read position: chr2:32,916,264 INFO 2026-06-08 08:40:11 MarkDuplicates Tracking 335300 as yet unmatched pairs. 162851 records in RAM. INFO 2026-06-08 08:40:13 MarkDuplicates Read 68,000,000 records. Elapsed time: 00:02:03s. Time for last 1,000,000: 2s. Last read position: chr2:32,916,264 INFO 2026-06-08 08:40:13 MarkDuplicates Tracking 1003291 as yet unmatched pairs. 151507 records in RAM. INFO 2026-06-08 08:40:15 MarkDuplicates Read 69,000,000 records. Elapsed time: 00:02:05s. Time for last 1,000,000: 1s. Last read position: chr2:32,916,406 INFO 2026-06-08 08:40:15 MarkDuplicates Tracking 1351240 as yet unmatched pairs. 145351 records in RAM. INFO 2026-06-08 08:40:16 MarkDuplicates Read 70,000,000 records. Elapsed time: 00:02:06s. Time for last 1,000,000: 1s. Last read position: chr2:32,916,406 INFO 2026-06-08 08:40:16 MarkDuplicates Tracking 1354911 as yet unmatched pairs. 145255 records in RAM. INFO 2026-06-08 08:40:18 MarkDuplicates Read 71,000,000 records. Elapsed time: 00:02:08s. Time for last 1,000,000: 1s. Last read position: chr2:36,905,537 INFO 2026-06-08 08:40:18 MarkDuplicates Tracking 1444746 as yet unmatched pairs. 142478 records in RAM. INFO 2026-06-08 08:40:19 MarkDuplicates Read 72,000,000 records. Elapsed time: 00:02:09s. Time for last 1,000,000: 1s. Last read position: chr2:43,549,292 INFO 2026-06-08 08:40:19 MarkDuplicates Tracking 1442888 as yet unmatched pairs. 140608 records in RAM. INFO 2026-06-08 08:40:21 MarkDuplicates Read 73,000,000 records. Elapsed time: 00:02:11s. Time for last 1,000,000: 1s. Last read position: chr2:53,817,901 INFO 2026-06-08 08:40:21 MarkDuplicates Tracking 1439593 as yet unmatched pairs. 137287 records in RAM. INFO 2026-06-08 08:40:23 MarkDuplicates Read 74,000,000 records. Elapsed time: 00:02:13s. Time for last 1,000,000: 1s. Last read position: chr2:60,891,711 INFO 2026-06-08 08:40:23 MarkDuplicates Tracking 1436500 as yet unmatched pairs. 134159 records in RAM. INFO 2026-06-08 08:40:25 MarkDuplicates Read 75,000,000 records. Elapsed time: 00:02:15s. Time for last 1,000,000: 1s. Last read position: chr2:68,252,140 INFO 2026-06-08 08:40:25 MarkDuplicates Tracking 1434008 as yet unmatched pairs. 131638 records in RAM. INFO 2026-06-08 08:40:27 MarkDuplicates Read 76,000,000 records. Elapsed time: 00:02:17s. Time for last 1,000,000: 2s. Last read position: chr2:73,080,225 INFO 2026-06-08 08:40:27 MarkDuplicates Tracking 1431697 as yet unmatched pairs. 129281 records in RAM. INFO 2026-06-08 08:40:30 MarkDuplicates Read 77,000,000 records. Elapsed time: 00:02:19s. Time for last 1,000,000: 2s. Last read position: chr2:84,906,020 INFO 2026-06-08 08:40:30 MarkDuplicates Tracking 1429994 as yet unmatched pairs. 127559 records in RAM. INFO 2026-06-08 08:40:32 MarkDuplicates Read 78,000,000 records. Elapsed time: 00:02:22s. Time for last 1,000,000: 2s. Last read position: chr2:91,748,315 INFO 2026-06-08 08:40:32 MarkDuplicates Tracking 1426797 as yet unmatched pairs. 124305 records in RAM. INFO 2026-06-08 08:40:33 MarkDuplicates Read 79,000,000 records. Elapsed time: 00:02:23s. Time for last 1,000,000: 1s. Last read position: chr2:98,536,129 INFO 2026-06-08 08:40:33 MarkDuplicates Tracking 1424838 as yet unmatched pairs. 122318 records in RAM. INFO 2026-06-08 08:40:35 MarkDuplicates Read 80,000,000 records. Elapsed time: 00:02:25s. Time for last 1,000,000: 1s. Last read position: chr2:108,496,987 INFO 2026-06-08 08:40:35 MarkDuplicates Tracking 1422701 as yet unmatched pairs. 120130 records in RAM. INFO 2026-06-08 08:40:36 MarkDuplicates Read 81,000,000 records. Elapsed time: 00:02:26s. Time for last 1,000,000: 1s. Last read position: chr2:109,835,027 INFO 2026-06-08 08:40:36 MarkDuplicates Tracking 1420824 as yet unmatched pairs. 118250 records in RAM. INFO 2026-06-08 08:40:38 MarkDuplicates Read 82,000,000 records. Elapsed time: 00:02:27s. Time for last 1,000,000: 1s. Last read position: chr2:112,417,850 INFO 2026-06-08 08:40:38 MarkDuplicates Tracking 1419349 as yet unmatched pairs. 116743 records in RAM. INFO 2026-06-08 08:40:39 MarkDuplicates Read 83,000,000 records. Elapsed time: 00:02:29s. Time for last 1,000,000: 1s. Last read position: chr2:127,873,839 INFO 2026-06-08 08:40:39 MarkDuplicates Tracking 1417100 as yet unmatched pairs. 114431 records in RAM. INFO 2026-06-08 08:40:41 MarkDuplicates Read 84,000,000 records. Elapsed time: 00:02:31s. Time for last 1,000,000: 1s. Last read position: chr2:135,916,226 INFO 2026-06-08 08:40:41 MarkDuplicates Tracking 1415024 as yet unmatched pairs. 112320 records in RAM. INFO 2026-06-08 08:40:42 MarkDuplicates Read 85,000,000 records. Elapsed time: 00:02:32s. Time for last 1,000,000: 1s. Last read position: chr2:160,005,654 INFO 2026-06-08 08:40:42 MarkDuplicates Tracking 1412348 as yet unmatched pairs. 109597 records in RAM. INFO 2026-06-08 08:40:44 MarkDuplicates Read 86,000,000 records. Elapsed time: 00:02:34s. Time for last 1,000,000: 2s. Last read position: chr2:171,726,227 INFO 2026-06-08 08:40:44 MarkDuplicates Tracking 1410193 as yet unmatched pairs. 107383 records in RAM. INFO 2026-06-08 08:40:46 MarkDuplicates Read 87,000,000 records. Elapsed time: 00:02:36s. Time for last 1,000,000: 1s. Last read position: chr2:178,541,474 INFO 2026-06-08 08:40:46 MarkDuplicates Tracking 1407512 as yet unmatched pairs. 104665 records in RAM. INFO 2026-06-08 08:40:48 MarkDuplicates Read 88,000,000 records. Elapsed time: 00:02:38s. Time for last 1,000,000: 1s. Last read position: chr2:188,988,607 INFO 2026-06-08 08:40:48 MarkDuplicates Tracking 1422394 as yet unmatched pairs. 119507 records in RAM. INFO 2026-06-08 08:40:50 MarkDuplicates Read 89,000,000 records. Elapsed time: 00:02:40s. Time for last 1,000,000: 1s. Last read position: chr2:188,999,550 INFO 2026-06-08 08:40:50 MarkDuplicates Tracking 1409053 as yet unmatched pairs. 106139 records in RAM. INFO 2026-06-08 08:40:53 MarkDuplicates Read 90,000,000 records. Elapsed time: 00:02:43s. Time for last 1,000,000: 2s. Last read position: chr2:189,010,791 INFO 2026-06-08 08:40:53 MarkDuplicates Tracking 1404511 as yet unmatched pairs. 101555 records in RAM. INFO 2026-06-08 08:40:55 MarkDuplicates Read 91,000,000 records. Elapsed time: 00:02:45s. Time for last 1,000,000: 2s. Last read position: chr2:189,864,004 INFO 2026-06-08 08:40:55 MarkDuplicates Tracking 1396065 as yet unmatched pairs. 93081 records in RAM. INFO 2026-06-08 08:40:57 MarkDuplicates Read 92,000,000 records. Elapsed time: 00:02:47s. Time for last 1,000,000: 1s. Last read position: chr2:201,137,506 INFO 2026-06-08 08:40:57 MarkDuplicates Tracking 1394012 as yet unmatched pairs. 90976 records in RAM. INFO 2026-06-08 08:40:58 MarkDuplicates Read 93,000,000 records. Elapsed time: 00:02:48s. Time for last 1,000,000: 1s. Last read position: chr2:211,712,098 INFO 2026-06-08 08:40:58 MarkDuplicates Tracking 1391844 as yet unmatched pairs. 88771 records in RAM. INFO 2026-06-08 08:41:00 MarkDuplicates Read 94,000,000 records. Elapsed time: 00:02:50s. Time for last 1,000,000: 1s. Last read position: chr2:215,361,613 INFO 2026-06-08 08:41:00 MarkDuplicates Tracking 1461839 as yet unmatched pairs. 158749 records in RAM. INFO 2026-06-08 08:41:02 MarkDuplicates Read 95,000,000 records. Elapsed time: 00:02:52s. Time for last 1,000,000: 2s. Last read position: chr2:215,364,936 INFO 2026-06-08 08:41:02 MarkDuplicates Tracking 1434429 as yet unmatched pairs. 131336 records in RAM. INFO 2026-06-08 08:41:04 MarkDuplicates Read 96,000,000 records. Elapsed time: 00:02:54s. Time for last 1,000,000: 1s. Last read position: chr2:215,368,013 INFO 2026-06-08 08:41:04 MarkDuplicates Tracking 1458678 as yet unmatched pairs. 155569 records in RAM. INFO 2026-06-08 08:41:06 MarkDuplicates Read 97,000,000 records. Elapsed time: 00:02:56s. Time for last 1,000,000: 1s. Last read position: chr2:215,371,979 INFO 2026-06-08 08:41:06 MarkDuplicates Tracking 1439016 as yet unmatched pairs. 135886 records in RAM. INFO 2026-06-08 08:41:08 MarkDuplicates Read 98,000,000 records. Elapsed time: 00:02:57s. Time for last 1,000,000: 1s. Last read position: chr2:215,372,152 INFO 2026-06-08 08:41:08 MarkDuplicates Tracking 1479896 as yet unmatched pairs. 176761 records in RAM. INFO 2026-06-08 08:41:09 MarkDuplicates Read 99,000,000 records. Elapsed time: 00:02:59s. Time for last 1,000,000: 1s. Last read position: chr2:215,372,346 INFO 2026-06-08 08:41:09 MarkDuplicates Tracking 1418001 as yet unmatched pairs. 114850 records in RAM. INFO 2026-06-08 08:41:11 MarkDuplicates Read 100,000,000 records. Elapsed time: 00:03:01s. Time for last 1,000,000: 1s. Last read position: chr2:215,375,270 INFO 2026-06-08 08:41:11 MarkDuplicates Tracking 1433087 as yet unmatched pairs. 129925 records in RAM. INFO 2026-06-08 08:41:13 MarkDuplicates Read 101,000,000 records. Elapsed time: 00:03:03s. Time for last 1,000,000: 1s. Last read position: chr2:215,375,653 INFO 2026-06-08 08:41:13 MarkDuplicates Tracking 1468954 as yet unmatched pairs. 165777 records in RAM. INFO 2026-06-08 08:41:14 MarkDuplicates Read 102,000,000 records. Elapsed time: 00:03:04s. Time for last 1,000,000: 1s. Last read position: chr2:215,376,616 INFO 2026-06-08 08:41:14 MarkDuplicates Tracking 1436970 as yet unmatched pairs. 133791 records in RAM. INFO 2026-06-08 08:41:16 MarkDuplicates Read 103,000,000 records. Elapsed time: 00:03:06s. Time for last 1,000,000: 1s. Last read position: chr2:215,379,190 INFO 2026-06-08 08:41:16 MarkDuplicates Tracking 1413764 as yet unmatched pairs. 110581 records in RAM. INFO 2026-06-08 08:41:18 MarkDuplicates Read 104,000,000 records. Elapsed time: 00:03:08s. Time for last 1,000,000: 1s. Last read position: chr2:215,380,925 INFO 2026-06-08 08:41:18 MarkDuplicates Tracking 1447404 as yet unmatched pairs. 144194 records in RAM. INFO 2026-06-08 08:41:20 MarkDuplicates Read 105,000,000 records. Elapsed time: 00:03:10s. Time for last 1,000,000: 1s. Last read position: chr2:215,383,378 INFO 2026-06-08 08:41:20 MarkDuplicates Tracking 1414439 as yet unmatched pairs. 111206 records in RAM. INFO 2026-06-08 08:41:22 MarkDuplicates Read 106,000,000 records. Elapsed time: 00:03:12s. Time for last 1,000,000: 2s. Last read position: chr2:215,384,866 INFO 2026-06-08 08:41:22 MarkDuplicates Tracking 1399580 as yet unmatched pairs. 96324 records in RAM. INFO 2026-06-08 08:41:23 MarkDuplicates Read 107,000,000 records. Elapsed time: 00:03:13s. Time for last 1,000,000: 1s. Last read position: chr2:215,386,869 INFO 2026-06-08 08:41:23 MarkDuplicates Tracking 1459571 as yet unmatched pairs. 156298 records in RAM. INFO 2026-06-08 08:41:25 MarkDuplicates Read 108,000,000 records. Elapsed time: 00:03:15s. Time for last 1,000,000: 1s. Last read position: chr2:215,391,731 INFO 2026-06-08 08:41:25 MarkDuplicates Tracking 1382564 as yet unmatched pairs. 79282 records in RAM. INFO 2026-06-08 08:41:27 MarkDuplicates Read 109,000,000 records. Elapsed time: 00:03:17s. Time for last 1,000,000: 1s. Last read position: chr2:215,394,681 INFO 2026-06-08 08:41:27 MarkDuplicates Tracking 1412960 as yet unmatched pairs. 109656 records in RAM. INFO 2026-06-08 08:41:29 MarkDuplicates Read 110,000,000 records. Elapsed time: 00:03:19s. Time for last 1,000,000: 1s. Last read position: chr2:215,397,744 INFO 2026-06-08 08:41:29 MarkDuplicates Tracking 1405773 as yet unmatched pairs. 102454 records in RAM. INFO 2026-06-08 08:41:31 MarkDuplicates Read 111,000,000 records. Elapsed time: 00:03:21s. Time for last 1,000,000: 1s. Last read position: chr2:215,404,455 INFO 2026-06-08 08:41:31 MarkDuplicates Tracking 1390726 as yet unmatched pairs. 87384 records in RAM. INFO 2026-06-08 08:41:33 MarkDuplicates Read 112,000,000 records. Elapsed time: 00:03:23s. Time for last 1,000,000: 2s. Last read position: chr2:215,406,328 INFO 2026-06-08 08:41:33 MarkDuplicates Tracking 1389658 as yet unmatched pairs. 86304 records in RAM. INFO 2026-06-08 08:41:35 MarkDuplicates Read 113,000,000 records. Elapsed time: 00:03:25s. Time for last 1,000,000: 2s. Last read position: chr2:215,407,248 INFO 2026-06-08 08:41:35 MarkDuplicates Tracking 1399393 as yet unmatched pairs. 96012 records in RAM. INFO 2026-06-08 08:41:37 MarkDuplicates Read 114,000,000 records. Elapsed time: 00:03:27s. Time for last 1,000,000: 2s. Last read position: chr2:215,408,315 INFO 2026-06-08 08:41:37 MarkDuplicates Tracking 1404333 as yet unmatched pairs. 100948 records in RAM. INFO 2026-06-08 08:41:39 MarkDuplicates Read 115,000,000 records. Elapsed time: 00:03:29s. Time for last 1,000,000: 1s. Last read position: chr2:215,409,936 INFO 2026-06-08 08:41:39 MarkDuplicates Tracking 1372566 as yet unmatched pairs. 69161 records in RAM. INFO 2026-06-08 08:41:41 MarkDuplicates Read 116,000,000 records. Elapsed time: 00:03:31s. Time for last 1,000,000: 1s. Last read position: chr2:215,414,837 INFO 2026-06-08 08:41:41 MarkDuplicates Tracking 1368707 as yet unmatched pairs. 65284 records in RAM. INFO 2026-06-08 08:41:43 MarkDuplicates Read 117,000,000 records. Elapsed time: 00:03:33s. Time for last 1,000,000: 1s. Last read position: chr2:215,420,695 INFO 2026-06-08 08:41:43 MarkDuplicates Tracking 1343906 as yet unmatched pairs. 40478 records in RAM. INFO 2026-06-08 08:41:44 MarkDuplicates Read 118,000,000 records. Elapsed time: 00:03:34s. Time for last 1,000,000: 1s. Last read position: chr2:215,423,459 INFO 2026-06-08 08:41:44 MarkDuplicates Tracking 1355157 as yet unmatched pairs. 51724 records in RAM. INFO 2026-06-08 08:41:46 MarkDuplicates Read 119,000,000 records. Elapsed time: 00:03:36s. Time for last 1,000,000: 1s. Last read position: chr2:215,425,144 INFO 2026-06-08 08:41:46 MarkDuplicates Tracking 1357706 as yet unmatched pairs. 54251 records in RAM. INFO 2026-06-08 08:41:48 MarkDuplicates Read 120,000,000 records. Elapsed time: 00:03:38s. Time for last 1,000,000: 1s. Last read position: chr2:215,428,319 INFO 2026-06-08 08:41:48 MarkDuplicates Tracking 1376942 as yet unmatched pairs. 73463 records in RAM. INFO 2026-06-08 08:41:49 MarkDuplicates Read 121,000,000 records. Elapsed time: 00:03:39s. Time for last 1,000,000: 1s. Last read position: chr2:215,431,948 INFO 2026-06-08 08:41:49 MarkDuplicates Tracking 1374683 as yet unmatched pairs. 71202 records in RAM. INFO 2026-06-08 08:41:51 MarkDuplicates Read 122,000,000 records. Elapsed time: 00:03:41s. Time for last 1,000,000: 1s. Last read position: chr2:215,435,711 INFO 2026-06-08 08:41:51 MarkDuplicates Tracking 1340454 as yet unmatched pairs. 36945 records in RAM. INFO 2026-06-08 08:41:53 MarkDuplicates Read 123,000,000 records. Elapsed time: 00:03:43s. Time for last 1,000,000: 1s. Last read position: chr2:218,277,945 INFO 2026-06-08 08:41:53 MarkDuplicates Tracking 1319829 as yet unmatched pairs. 16281 records in RAM. INFO 2026-06-08 08:41:55 MarkDuplicates Read 124,000,000 records. Elapsed time: 00:03:44s. Time for last 1,000,000: 1s. Last read position: chr2:226,797,745 INFO 2026-06-08 08:41:55 MarkDuplicates Tracking 1315442 as yet unmatched pairs. 11858 records in RAM. INFO 2026-06-08 08:41:57 MarkDuplicates Read 125,000,000 records. Elapsed time: 00:03:47s. Time for last 1,000,000: 2s. Last read position: chr2:232,662,934 INFO 2026-06-08 08:41:57 MarkDuplicates Tracking 1313313 as yet unmatched pairs. 9696 records in RAM. INFO 2026-06-08 08:41:59 MarkDuplicates Read 126,000,000 records. Elapsed time: 00:03:49s. Time for last 1,000,000: 2s. Last read position: chr2:237,352,548 INFO 2026-06-08 08:41:59 MarkDuplicates Tracking 1313335 as yet unmatched pairs. 9660 records in RAM. INFO 2026-06-08 08:42:01 MarkDuplicates Read 127,000,000 records. Elapsed time: 00:03:51s. Time for last 1,000,000: 1s. Last read position: chr2:237,381,210 INFO 2026-06-08 08:42:01 MarkDuplicates Tracking 1310053 as yet unmatched pairs. 6338 records in RAM. INFO 2026-06-08 08:42:03 MarkDuplicates Read 128,000,000 records. Elapsed time: 00:03:53s. Time for last 1,000,000: 1s. Last read position: chr2:241,249,882 INFO 2026-06-08 08:42:03 MarkDuplicates Tracking 1306040 as yet unmatched pairs. 2287 records in RAM. INFO 2026-06-08 08:42:05 MarkDuplicates Read 129,000,000 records. Elapsed time: 00:03:55s. Time for last 1,000,000: 2s. Last read position: chr3:9,473,460 INFO 2026-06-08 08:42:05 MarkDuplicates Tracking 1302664 as yet unmatched pairs. 71303 records in RAM. INFO 2026-06-08 08:42:07 MarkDuplicates Read 130,000,000 records. Elapsed time: 00:03:57s. Time for last 1,000,000: 1s. Last read position: chr3:12,618,560 INFO 2026-06-08 08:42:07 MarkDuplicates Tracking 1302177 as yet unmatched pairs. 70789 records in RAM. INFO 2026-06-08 08:42:08 MarkDuplicates Read 131,000,000 records. Elapsed time: 00:03:58s. Time for last 1,000,000: 1s. Last read position: chr3:15,738,593 INFO 2026-06-08 08:42:08 MarkDuplicates Tracking 1297536 as yet unmatched pairs. 66107 records in RAM. INFO 2026-06-08 08:42:10 MarkDuplicates Read 132,000,000 records. Elapsed time: 00:04:00s. Time for last 1,000,000: 1s. Last read position: chr3:33,402,836 INFO 2026-06-08 08:42:10 MarkDuplicates Tracking 1295525 as yet unmatched pairs. 64050 records in RAM. INFO 2026-06-08 08:42:12 MarkDuplicates Read 133,000,000 records. Elapsed time: 00:04:02s. Time for last 1,000,000: 1s. Last read position: chr3:39,407,740 INFO 2026-06-08 08:42:12 MarkDuplicates Tracking 1295756 as yet unmatched pairs. 64253 records in RAM. INFO 2026-06-08 08:42:13 MarkDuplicates Read 134,000,000 records. Elapsed time: 00:04:03s. Time for last 1,000,000: 1s. Last read position: chr3:43,081,004 INFO 2026-06-08 08:42:13 MarkDuplicates Tracking 1290239 as yet unmatched pairs. 58701 records in RAM. INFO 2026-06-08 08:42:15 MarkDuplicates Read 135,000,000 records. Elapsed time: 00:04:05s. Time for last 1,000,000: 1s. Last read position: chr3:47,407,714 INFO 2026-06-08 08:42:15 MarkDuplicates Tracking 1287797 as yet unmatched pairs. 56220 records in RAM. INFO 2026-06-08 08:42:17 MarkDuplicates Read 136,000,000 records. Elapsed time: 00:04:07s. Time for last 1,000,000: 1s. Last read position: chr3:48,421,301 INFO 2026-06-08 08:42:17 MarkDuplicates Tracking 1285485 as yet unmatched pairs. 53878 records in RAM. INFO 2026-06-08 08:42:18 MarkDuplicates Read 137,000,000 records. Elapsed time: 00:04:08s. Time for last 1,000,000: 1s. Last read position: chr3:49,026,298 INFO 2026-06-08 08:42:18 MarkDuplicates Tracking 1282852 as yet unmatched pairs. 51218 records in RAM. INFO 2026-06-08 08:42:21 MarkDuplicates Read 138,000,000 records. Elapsed time: 00:04:11s. Time for last 1,000,000: 2s. Last read position: chr3:49,368,532 INFO 2026-06-08 08:42:21 MarkDuplicates Tracking 1282762 as yet unmatched pairs. 51098 records in RAM. INFO 2026-06-08 08:42:23 MarkDuplicates Read 139,000,000 records. Elapsed time: 00:04:13s. Time for last 1,000,000: 1s. Last read position: chr3:50,326,101 INFO 2026-06-08 08:42:23 MarkDuplicates Tracking 1277144 as yet unmatched pairs. 45457 records in RAM. INFO 2026-06-08 08:42:24 MarkDuplicates Read 140,000,000 records. Elapsed time: 00:04:14s. Time for last 1,000,000: 1s. Last read position: chr3:52,488,122 INFO 2026-06-08 08:42:24 MarkDuplicates Tracking 1274386 as yet unmatched pairs. 42683 records in RAM. INFO 2026-06-08 08:42:27 MarkDuplicates Read 141,000,000 records. Elapsed time: 00:04:17s. Time for last 1,000,000: 2s. Last read position: chr3:53,723,620 INFO 2026-06-08 08:42:27 MarkDuplicates Tracking 1271661 as yet unmatched pairs. 39918 records in RAM. INFO 2026-06-08 08:42:29 MarkDuplicates Read 142,000,000 records. Elapsed time: 00:04:19s. Time for last 1,000,000: 2s. Last read position: chr3:58,124,447 INFO 2026-06-08 08:42:29 MarkDuplicates Tracking 1270069 as yet unmatched pairs. 38318 records in RAM. INFO 2026-06-08 08:42:31 MarkDuplicates Read 143,000,000 records. Elapsed time: 00:04:21s. Time for last 1,000,000: 1s. Last read position: chr3:69,048,338 INFO 2026-06-08 08:42:31 MarkDuplicates Tracking 1266447 as yet unmatched pairs. 34624 records in RAM. INFO 2026-06-08 08:42:33 MarkDuplicates Read 144,000,000 records. Elapsed time: 00:04:23s. Time for last 1,000,000: 1s. Last read position: chr3:99,850,014 INFO 2026-06-08 08:42:33 MarkDuplicates Tracking 1265208 as yet unmatched pairs. 33320 records in RAM. INFO 2026-06-08 08:42:34 MarkDuplicates Read 145,000,000 records. Elapsed time: 00:04:24s. Time for last 1,000,000: 1s. Last read position: chr3:112,550,218 INFO 2026-06-08 08:42:34 MarkDuplicates Tracking 1261422 as yet unmatched pairs. 29497 records in RAM. INFO 2026-06-08 08:42:36 MarkDuplicates Read 146,000,000 records. Elapsed time: 00:04:26s. Time for last 1,000,000: 1s. Last read position: chr3:121,696,309 INFO 2026-06-08 08:42:36 MarkDuplicates Tracking 1259040 as yet unmatched pairs. 27085 records in RAM. INFO 2026-06-08 08:42:38 MarkDuplicates Read 147,000,000 records. Elapsed time: 00:04:28s. Time for last 1,000,000: 1s. Last read position: chr3:125,233,573 INFO 2026-06-08 08:42:38 MarkDuplicates Tracking 1256710 as yet unmatched pairs. 24722 records in RAM. INFO 2026-06-08 08:42:39 MarkDuplicates Read 148,000,000 records. Elapsed time: 00:04:29s. Time for last 1,000,000: 1s. Last read position: chr3:129,265,742 INFO 2026-06-08 08:42:39 MarkDuplicates Tracking 1253986 as yet unmatched pairs. 21957 records in RAM. INFO 2026-06-08 08:42:41 MarkDuplicates Read 149,000,000 records. Elapsed time: 00:04:31s. Time for last 1,000,000: 1s. Last read position: chr3:133,623,175 INFO 2026-06-08 08:42:41 MarkDuplicates Tracking 1251079 as yet unmatched pairs. 19030 records in RAM. INFO 2026-06-08 08:42:43 MarkDuplicates Read 150,000,000 records. Elapsed time: 00:04:33s. Time for last 1,000,000: 1s. Last read position: chr3:142,689,805 INFO 2026-06-08 08:42:43 MarkDuplicates Tracking 1248335 as yet unmatched pairs. 16249 records in RAM. INFO 2026-06-08 08:42:44 MarkDuplicates Read 151,000,000 records. Elapsed time: 00:04:34s. Time for last 1,000,000: 1s. Last read position: chr3:155,167,001 INFO 2026-06-08 08:42:44 MarkDuplicates Tracking 1245853 as yet unmatched pairs. 13732 records in RAM. INFO 2026-06-08 08:42:46 MarkDuplicates Read 152,000,000 records. Elapsed time: 00:04:36s. Time for last 1,000,000: 1s. Last read position: chr3:170,361,025 INFO 2026-06-08 08:42:46 MarkDuplicates Tracking 1244343 as yet unmatched pairs. 12165 records in RAM. INFO 2026-06-08 08:42:48 MarkDuplicates Read 153,000,000 records. Elapsed time: 00:04:38s. Time for last 1,000,000: 2s. Last read position: chr3:183,729,012 INFO 2026-06-08 08:42:48 MarkDuplicates Tracking 1241185 as yet unmatched pairs. 8958 records in RAM. INFO 2026-06-08 08:42:50 MarkDuplicates Read 154,000,000 records. Elapsed time: 00:04:40s. Time for last 1,000,000: 1s. Last read position: chr3:184,572,744 INFO 2026-06-08 08:42:50 MarkDuplicates Tracking 1238584 as yet unmatched pairs. 6339 records in RAM. INFO 2026-06-08 08:42:51 MarkDuplicates Read 155,000,000 records. Elapsed time: 00:04:41s. Time for last 1,000,000: 1s. Last read position: chr3:188,609,525 INFO 2026-06-08 08:42:51 MarkDuplicates Tracking 1237411 as yet unmatched pairs. 5148 records in RAM. INFO 2026-06-08 08:42:53 MarkDuplicates Read 156,000,000 records. Elapsed time: 00:04:43s. Time for last 1,000,000: 1s. Last read position: chr3:196,257,803 INFO 2026-06-08 08:42:53 MarkDuplicates Tracking 1233918 as yet unmatched pairs. 1610 records in RAM. INFO 2026-06-08 08:42:55 MarkDuplicates Read 157,000,000 records. Elapsed time: 00:04:45s. Time for last 1,000,000: 2s. Last read position: chr4:1,170,419 INFO 2026-06-08 08:42:55 MarkDuplicates Tracking 1231169 as yet unmatched pairs. 34793 records in RAM. INFO 2026-06-08 08:42:57 MarkDuplicates Read 158,000,000 records. Elapsed time: 00:04:47s. Time for last 1,000,000: 1s. Last read position: chr4:3,105,384 INFO 2026-06-08 08:42:57 MarkDuplicates Tracking 1228086 as yet unmatched pairs. 31664 records in RAM. INFO 2026-06-08 08:42:58 MarkDuplicates Read 159,000,000 records. Elapsed time: 00:04:48s. Time for last 1,000,000: 1s. Last read position: chr4:9,249,103 INFO 2026-06-08 08:42:58 MarkDuplicates Tracking 1225025 as yet unmatched pairs. 28570 records in RAM. INFO 2026-06-08 08:43:00 MarkDuplicates Read 160,000,000 records. Elapsed time: 00:04:50s. Time for last 1,000,000: 2s. Last read position: chr4:26,430,716 INFO 2026-06-08 08:43:00 MarkDuplicates Tracking 1223043 as yet unmatched pairs. 26547 records in RAM. INFO 2026-06-08 08:43:02 MarkDuplicates Read 161,000,000 records. Elapsed time: 00:04:52s. Time for last 1,000,000: 1s. Last read position: chr4:41,938,630 INFO 2026-06-08 08:43:02 MarkDuplicates Tracking 1220457 as yet unmatched pairs. 23908 records in RAM. INFO 2026-06-08 08:43:04 MarkDuplicates Read 162,000,000 records. Elapsed time: 00:04:54s. Time for last 1,000,000: 1s. Last read position: chr4:56,976,698 INFO 2026-06-08 08:43:04 MarkDuplicates Tracking 1217886 as yet unmatched pairs. 21306 records in RAM. INFO 2026-06-08 08:43:06 MarkDuplicates Read 163,000,000 records. Elapsed time: 00:04:56s. Time for last 1,000,000: 1s. Last read position: chr4:76,741,096 INFO 2026-06-08 08:43:06 MarkDuplicates Tracking 1215208 as yet unmatched pairs. 18597 records in RAM. INFO 2026-06-08 08:43:08 MarkDuplicates Read 164,000,000 records. Elapsed time: 00:04:58s. Time for last 1,000,000: 1s. Last read position: chr4:84,826,819 INFO 2026-06-08 08:43:08 MarkDuplicates Tracking 1212857 as yet unmatched pairs. 16215 records in RAM. INFO 2026-06-08 08:43:09 MarkDuplicates Read 165,000,000 records. Elapsed time: 00:04:59s. Time for last 1,000,000: 1s. Last read position: chr4:87,982,623 INFO 2026-06-08 08:43:09 MarkDuplicates Tracking 1226159 as yet unmatched pairs. 29497 records in RAM. INFO 2026-06-08 08:43:11 MarkDuplicates Read 166,000,000 records. Elapsed time: 00:05:01s. Time for last 1,000,000: 1s. Last read position: chr4:105,552,905 INFO 2026-06-08 08:43:11 MarkDuplicates Tracking 1208171 as yet unmatched pairs. 11450 records in RAM. INFO 2026-06-08 08:43:13 MarkDuplicates Read 167,000,000 records. Elapsed time: 00:05:03s. Time for last 1,000,000: 1s. Last read position: chr4:122,230,083 INFO 2026-06-08 08:43:13 MarkDuplicates Tracking 1205713 as yet unmatched pairs. 8953 records in RAM. INFO 2026-06-08 08:43:14 MarkDuplicates Read 168,000,000 records. Elapsed time: 00:05:04s. Time for last 1,000,000: 1s. Last read position: chr4:145,104,393 INFO 2026-06-08 08:43:14 MarkDuplicates Tracking 1203579 as yet unmatched pairs. 6756 records in RAM. INFO 2026-06-08 08:43:16 MarkDuplicates Read 169,000,000 records. Elapsed time: 00:05:06s. Time for last 1,000,000: 1s. Last read position: chr4:153,788,536 INFO 2026-06-08 08:43:16 MarkDuplicates Tracking 1205818 as yet unmatched pairs. 8973 records in RAM. INFO 2026-06-08 08:43:17 MarkDuplicates Read 170,000,000 records. Elapsed time: 00:05:07s. Time for last 1,000,000: 1s. Last read position: chr4:183,322,077 INFO 2026-06-08 08:43:17 MarkDuplicates Tracking 1198259 as yet unmatched pairs. 1376 records in RAM. INFO 2026-06-08 08:43:20 MarkDuplicates Read 171,000,000 records. Elapsed time: 00:05:09s. Time for last 1,000,000: 2s. Last read position: chr5:1,085,246 INFO 2026-06-08 08:43:20 MarkDuplicates Tracking 1196463 as yet unmatched pairs. 62926 records in RAM. INFO 2026-06-08 08:43:21 MarkDuplicates Read 172,000,000 records. Elapsed time: 00:05:11s. Time for last 1,000,000: 1s. Last read position: chr5:13,781,057 INFO 2026-06-08 08:43:21 MarkDuplicates Tracking 1193133 as yet unmatched pairs. 59577 records in RAM. INFO 2026-06-08 08:43:23 MarkDuplicates Read 173,000,000 records. Elapsed time: 00:05:13s. Time for last 1,000,000: 1s. Last read position: chr5:14,378,048 INFO 2026-06-08 08:43:23 MarkDuplicates Tracking 1197369 as yet unmatched pairs. 63771 records in RAM. INFO 2026-06-08 08:43:24 MarkDuplicates Read 174,000,000 records. Elapsed time: 00:05:14s. Time for last 1,000,000: 1s. Last read position: chr5:14,497,000 INFO 2026-06-08 08:43:24 MarkDuplicates Tracking 1191581 as yet unmatched pairs. 57977 records in RAM. INFO 2026-06-08 08:43:26 MarkDuplicates Read 175,000,000 records. Elapsed time: 00:05:16s. Time for last 1,000,000: 1s. Last read position: chr5:33,661,931 INFO 2026-06-08 08:43:26 MarkDuplicates Tracking 1185118 as yet unmatched pairs. 51501 records in RAM. INFO 2026-06-08 08:43:28 MarkDuplicates Read 176,000,000 records. Elapsed time: 00:05:18s. Time for last 1,000,000: 1s. Last read position: chr5:39,377,009 INFO 2026-06-08 08:43:28 MarkDuplicates Tracking 1183559 as yet unmatched pairs. 49886 records in RAM. INFO 2026-06-08 08:43:29 MarkDuplicates Read 177,000,000 records. Elapsed time: 00:05:19s. Time for last 1,000,000: 1s. Last read position: chr5:55,954,849 INFO 2026-06-08 08:43:29 MarkDuplicates Tracking 1181913 as yet unmatched pairs. 48201 records in RAM. INFO 2026-06-08 08:43:31 MarkDuplicates Read 178,000,000 records. Elapsed time: 00:05:21s. Time for last 1,000,000: 1s. Last read position: chr5:70,108,301 INFO 2026-06-08 08:43:31 MarkDuplicates Tracking 1177915 as yet unmatched pairs. 44162 records in RAM. INFO 2026-06-08 08:43:33 MarkDuplicates Read 179,000,000 records. Elapsed time: 00:05:23s. Time for last 1,000,000: 2s. Last read position: chr5:76,733,310 INFO 2026-06-08 08:43:33 MarkDuplicates Tracking 1176198 as yet unmatched pairs. 42421 records in RAM. INFO 2026-06-08 08:43:34 MarkDuplicates Read 180,000,000 records. Elapsed time: 00:05:24s. Time for last 1,000,000: 1s. Last read position: chr5:83,537,762 INFO 2026-06-08 08:43:34 MarkDuplicates Tracking 1175433 as yet unmatched pairs. 41615 records in RAM. INFO 2026-06-08 08:43:36 MarkDuplicates Read 181,000,000 records. Elapsed time: 00:05:26s. Time for last 1,000,000: 1s. Last read position: chr5:96,662,483 INFO 2026-06-08 08:43:36 MarkDuplicates Tracking 1171439 as yet unmatched pairs. 37594 records in RAM. INFO 2026-06-08 08:43:37 MarkDuplicates Read 182,000,000 records. Elapsed time: 00:05:27s. Time for last 1,000,000: 1s. Last read position: chr5:119,529,958 INFO 2026-06-08 08:43:37 MarkDuplicates Tracking 1168635 as yet unmatched pairs. 34758 records in RAM. INFO 2026-06-08 08:43:39 MarkDuplicates Read 183,000,000 records. Elapsed time: 00:05:29s. Time for last 1,000,000: 1s. Last read position: chr5:134,201,994 INFO 2026-06-08 08:43:39 MarkDuplicates Tracking 1166697 as yet unmatched pairs. 32799 records in RAM. INFO 2026-06-08 08:43:41 MarkDuplicates Read 184,000,000 records. Elapsed time: 00:05:31s. Time for last 1,000,000: 1s. Last read position: chr5:138,824,581 INFO 2026-06-08 08:43:41 MarkDuplicates Tracking 1164371 as yet unmatched pairs. 30442 records in RAM. INFO 2026-06-08 08:43:42 MarkDuplicates Read 185,000,000 records. Elapsed time: 00:05:32s. Time for last 1,000,000: 1s. Last read position: chr5:141,399,283 INFO 2026-06-08 08:43:42 MarkDuplicates Tracking 1160883 as yet unmatched pairs. 26917 records in RAM. INFO 2026-06-08 08:43:44 MarkDuplicates Read 186,000,000 records. Elapsed time: 00:05:34s. Time for last 1,000,000: 1s. Last read position: chr5:150,070,535 INFO 2026-06-08 08:43:44 MarkDuplicates Tracking 1158440 as yet unmatched pairs. 24443 records in RAM. INFO 2026-06-08 08:43:46 MarkDuplicates Read 187,000,000 records. Elapsed time: 00:05:36s. Time for last 1,000,000: 2s. Last read position: chr5:150,135,789 INFO 2026-06-08 08:43:46 MarkDuplicates Tracking 1160650 as yet unmatched pairs. 26642 records in RAM. INFO 2026-06-08 08:43:48 MarkDuplicates Read 188,000,000 records. Elapsed time: 00:05:38s. Time for last 1,000,000: 1s. Last read position: chr5:150,403,273 INFO 2026-06-08 08:43:48 MarkDuplicates Tracking 1180465 as yet unmatched pairs. 46444 records in RAM. INFO 2026-06-08 08:43:49 MarkDuplicates Read 189,000,000 records. Elapsed time: 00:05:39s. Time for last 1,000,000: 1s. Last read position: chr5:150,406,892 INFO 2026-06-08 08:43:49 MarkDuplicates Tracking 1189775 as yet unmatched pairs. 55735 records in RAM. INFO 2026-06-08 08:43:51 MarkDuplicates Read 190,000,000 records. Elapsed time: 00:05:41s. Time for last 1,000,000: 1s. Last read position: chr5:151,664,125 INFO 2026-06-08 08:43:51 MarkDuplicates Tracking 1149217 as yet unmatched pairs. 15160 records in RAM. INFO 2026-06-08 08:43:52 MarkDuplicates Read 191,000,000 records. Elapsed time: 00:05:42s. Time for last 1,000,000: 1s. Last read position: chr5:166,382,561 INFO 2026-06-08 08:43:52 MarkDuplicates Tracking 1144340 as yet unmatched pairs. 10265 records in RAM. INFO 2026-06-08 08:43:54 MarkDuplicates Read 192,000,000 records. Elapsed time: 00:05:44s. Time for last 1,000,000: 1s. Last read position: chr5:172,093,635 INFO 2026-06-08 08:43:54 MarkDuplicates Tracking 1142407 as yet unmatched pairs. 8319 records in RAM. INFO 2026-06-08 08:43:55 MarkDuplicates Read 193,000,000 records. Elapsed time: 00:05:45s. Time for last 1,000,000: 1s. Last read position: chr5:177,490,825 INFO 2026-06-08 08:43:55 MarkDuplicates Tracking 1140769 as yet unmatched pairs. 6660 records in RAM. INFO 2026-06-08 08:43:57 MarkDuplicates Read 194,000,000 records. Elapsed time: 00:05:47s. Time for last 1,000,000: 1s. Last read position: chr5:179,795,863 INFO 2026-06-08 08:43:57 MarkDuplicates Tracking 1136960 as yet unmatched pairs. 2832 records in RAM. INFO 2026-06-08 08:43:59 MarkDuplicates Read 195,000,000 records. Elapsed time: 00:05:49s. Time for last 1,000,000: 2s. Last read position: chr6:555,990 INFO 2026-06-08 08:43:59 MarkDuplicates Tracking 1134460 as yet unmatched pairs. 72371 records in RAM. INFO 2026-06-08 08:44:01 MarkDuplicates Read 196,000,000 records. Elapsed time: 00:05:51s. Time for last 1,000,000: 1s. Last read position: chr6:7,289,823 INFO 2026-06-08 08:44:01 MarkDuplicates Tracking 1135426 as yet unmatched pairs. 73300 records in RAM. INFO 2026-06-08 08:44:02 MarkDuplicates Read 197,000,000 records. Elapsed time: 00:05:52s. Time for last 1,000,000: 1s. Last read position: chr6:12,121,914 INFO 2026-06-08 08:44:02 MarkDuplicates Tracking 1129126 as yet unmatched pairs. 66968 records in RAM. INFO 2026-06-08 08:44:04 MarkDuplicates Read 198,000,000 records. Elapsed time: 00:05:54s. Time for last 1,000,000: 1s. Last read position: chr6:26,031,833 INFO 2026-06-08 08:44:04 MarkDuplicates Tracking 1127293 as yet unmatched pairs. 65097 records in RAM. INFO 2026-06-08 08:44:06 MarkDuplicates Read 199,000,000 records. Elapsed time: 00:05:56s. Time for last 1,000,000: 1s. Last read position: chr6:27,831,214 INFO 2026-06-08 08:44:06 MarkDuplicates Tracking 1124891 as yet unmatched pairs. 62673 records in RAM. INFO 2026-06-08 08:44:07 MarkDuplicates Read 200,000,000 records. Elapsed time: 00:05:57s. Time for last 1,000,000: 1s. Last read position: chr6:30,685,843 INFO 2026-06-08 08:44:07 MarkDuplicates Tracking 1121530 as yet unmatched pairs. 59289 records in RAM. INFO 2026-06-08 08:44:09 MarkDuplicates Read 201,000,000 records. Elapsed time: 00:05:59s. Time for last 1,000,000: 1s. Last read position: chr6:31,625,288 INFO 2026-06-08 08:44:09 MarkDuplicates Tracking 1119763 as yet unmatched pairs. 57503 records in RAM. INFO 2026-06-08 08:44:11 MarkDuplicates Read 202,000,000 records. Elapsed time: 00:06:01s. Time for last 1,000,000: 1s. Last read position: chr6:31,816,906 INFO 2026-06-08 08:44:11 MarkDuplicates Tracking 1116318 as yet unmatched pairs. 54047 records in RAM. INFO 2026-06-08 08:44:12 MarkDuplicates Read 203,000,000 records. Elapsed time: 00:06:02s. Time for last 1,000,000: 1s. Last read position: chr6:31,962,503 INFO 2026-06-08 08:44:12 MarkDuplicates Tracking 1114244 as yet unmatched pairs. 51960 records in RAM. INFO 2026-06-08 08:44:13 MarkDuplicates Read 204,000,000 records. Elapsed time: 00:06:03s. Time for last 1,000,000: 1s. Last read position: chr6:31,999,515 INFO 2026-06-08 08:44:13 MarkDuplicates Tracking 1118254 as yet unmatched pairs. 55962 records in RAM. INFO 2026-06-08 08:44:15 MarkDuplicates Read 205,000,000 records. Elapsed time: 00:06:05s. Time for last 1,000,000: 1s. Last read position: chr6:32,030,017 INFO 2026-06-08 08:44:15 MarkDuplicates Tracking 1114055 as yet unmatched pairs. 51758 records in RAM. INFO 2026-06-08 08:44:17 MarkDuplicates Read 206,000,000 records. Elapsed time: 00:06:06s. Time for last 1,000,000: 1s. Last read position: chr6:32,841,545 INFO 2026-06-08 08:44:17 MarkDuplicates Tracking 1108878 as yet unmatched pairs. 46570 records in RAM. INFO 2026-06-08 08:44:18 MarkDuplicates Read 207,000,000 records. Elapsed time: 00:06:08s. Time for last 1,000,000: 1s. Last read position: chr6:33,319,759 INFO 2026-06-08 08:44:18 MarkDuplicates Tracking 1106241 as yet unmatched pairs. 43916 records in RAM. INFO 2026-06-08 08:44:20 MarkDuplicates Read 208,000,000 records. Elapsed time: 00:06:10s. Time for last 1,000,000: 1s. Last read position: chr6:35,469,006 INFO 2026-06-08 08:44:20 MarkDuplicates Tracking 1104046 as yet unmatched pairs. 41703 records in RAM. INFO 2026-06-08 08:44:21 MarkDuplicates Read 209,000,000 records. Elapsed time: 00:06:11s. Time for last 1,000,000: 1s. Last read position: chr6:41,937,269 INFO 2026-06-08 08:44:21 MarkDuplicates Tracking 1100830 as yet unmatched pairs. 38448 records in RAM. INFO 2026-06-08 08:44:23 MarkDuplicates Read 210,000,000 records. Elapsed time: 00:06:13s. Time for last 1,000,000: 1s. Last read position: chr6:43,516,747 INFO 2026-06-08 08:44:23 MarkDuplicates Tracking 1098139 as yet unmatched pairs. 35743 records in RAM. INFO 2026-06-08 08:44:25 MarkDuplicates Read 211,000,000 records. Elapsed time: 00:06:14s. Time for last 1,000,000: 1s. Last read position: chr6:49,463,423 INFO 2026-06-08 08:44:25 MarkDuplicates Tracking 1095481 as yet unmatched pairs. 33058 records in RAM. INFO 2026-06-08 08:44:26 MarkDuplicates Read 212,000,000 records. Elapsed time: 00:06:16s. Time for last 1,000,000: 1s. Last read position: chr6:63,685,216 INFO 2026-06-08 08:44:26 MarkDuplicates Tracking 1094025 as yet unmatched pairs. 31533 records in RAM. INFO 2026-06-08 08:44:28 MarkDuplicates Read 213,000,000 records. Elapsed time: 00:06:18s. Time for last 1,000,000: 1s. Last read position: chr6:75,148,455 INFO 2026-06-08 08:44:28 MarkDuplicates Tracking 1092597 as yet unmatched pairs. 30063 records in RAM. INFO 2026-06-08 08:44:30 MarkDuplicates Read 214,000,000 records. Elapsed time: 00:06:20s. Time for last 1,000,000: 1s. Last read position: chr6:82,181,988 INFO 2026-06-08 08:44:30 MarkDuplicates Tracking 1088335 as yet unmatched pairs. 25782 records in RAM. INFO 2026-06-08 08:44:32 MarkDuplicates Read 215,000,000 records. Elapsed time: 00:06:22s. Time for last 1,000,000: 2s. Last read position: chr6:89,738,437 INFO 2026-06-08 08:44:32 MarkDuplicates Tracking 1085922 as yet unmatched pairs. 23330 records in RAM. INFO 2026-06-08 08:44:34 MarkDuplicates Read 216,000,000 records. Elapsed time: 00:06:24s. Time for last 1,000,000: 1s. Last read position: chr6:108,664,084 INFO 2026-06-08 08:44:34 MarkDuplicates Tracking 1083940 as yet unmatched pairs. 21295 records in RAM. INFO 2026-06-08 08:44:35 MarkDuplicates Read 217,000,000 records. Elapsed time: 00:06:25s. Time for last 1,000,000: 1s. Last read position: chr6:116,278,897 INFO 2026-06-08 08:44:35 MarkDuplicates Tracking 1080826 as yet unmatched pairs. 18163 records in RAM. INFO 2026-06-08 08:44:38 MarkDuplicates Read 218,000,000 records. Elapsed time: 00:06:28s. Time for last 1,000,000: 2s. Last read position: chr6:131,282,436 INFO 2026-06-08 08:44:38 MarkDuplicates Tracking 1078352 as yet unmatched pairs. 15652 records in RAM. INFO 2026-06-08 08:44:39 MarkDuplicates Read 219,000,000 records. Elapsed time: 00:06:29s. Time for last 1,000,000: 1s. Last read position: chr6:139,034,177 INFO 2026-06-08 08:44:39 MarkDuplicates Tracking 1076071 as yet unmatched pairs. 13343 records in RAM. INFO 2026-06-08 08:44:41 MarkDuplicates Read 220,000,000 records. Elapsed time: 00:06:31s. Time for last 1,000,000: 1s. Last read position: chr6:149,683,443 INFO 2026-06-08 08:44:41 MarkDuplicates Tracking 1074032 as yet unmatched pairs. 11260 records in RAM. INFO 2026-06-08 08:44:42 MarkDuplicates Read 221,000,000 records. Elapsed time: 00:06:32s. Time for last 1,000,000: 1s. Last read position: chr6:156,829,322 INFO 2026-06-08 08:44:42 MarkDuplicates Tracking 1071293 as yet unmatched pairs. 8495 records in RAM. INFO 2026-06-08 08:44:44 MarkDuplicates Read 222,000,000 records. Elapsed time: 00:06:34s. Time for last 1,000,000: 1s. Last read position: chr6:159,233,297 INFO 2026-06-08 08:44:44 MarkDuplicates Tracking 1068130 as yet unmatched pairs. 5307 records in RAM. INFO 2026-06-08 08:44:46 MarkDuplicates Read 223,000,000 records. Elapsed time: 00:06:36s. Time for last 1,000,000: 1s. Last read position: chr6:166,500,907 INFO 2026-06-08 08:44:46 MarkDuplicates Tracking 1065695 as yet unmatched pairs. 2843 records in RAM. INFO 2026-06-08 08:44:48 MarkDuplicates Read 224,000,000 records. Elapsed time: 00:06:38s. Time for last 1,000,000: 2s. Last read position: chr7:195,606 INFO 2026-06-08 08:44:48 MarkDuplicates Tracking 1063013 as yet unmatched pairs. 75007 records in RAM. INFO 2026-06-08 08:44:49 MarkDuplicates Read 225,000,000 records. Elapsed time: 00:06:39s. Time for last 1,000,000: 1s. Last read position: chr7:4,786,358 INFO 2026-06-08 08:44:49 MarkDuplicates Tracking 1059450 as yet unmatched pairs. 71425 records in RAM. INFO 2026-06-08 08:44:51 MarkDuplicates Read 226,000,000 records. Elapsed time: 00:06:41s. Time for last 1,000,000: 1s. Last read position: chr7:5,527,871 INFO 2026-06-08 08:44:51 MarkDuplicates Tracking 1068757 as yet unmatched pairs. 80718 records in RAM. INFO 2026-06-08 08:44:53 MarkDuplicates Read 227,000,000 records. Elapsed time: 00:06:43s. Time for last 1,000,000: 1s. Last read position: chr7:5,529,202 INFO 2026-06-08 08:44:53 MarkDuplicates Tracking 1082071 as yet unmatched pairs. 94018 records in RAM. INFO 2026-06-08 08:44:54 MarkDuplicates Read 228,000,000 records. Elapsed time: 00:06:44s. Time for last 1,000,000: 1s. Last read position: chr7:6,697,645 INFO 2026-06-08 08:44:54 MarkDuplicates Tracking 1051007 as yet unmatched pairs. 62932 records in RAM. INFO 2026-06-08 08:44:56 MarkDuplicates Read 229,000,000 records. Elapsed time: 00:06:46s. Time for last 1,000,000: 1s. Last read position: chr7:23,274,107 INFO 2026-06-08 08:44:56 MarkDuplicates Tracking 1049362 as yet unmatched pairs. 61258 records in RAM. INFO 2026-06-08 08:44:57 MarkDuplicates Read 230,000,000 records. Elapsed time: 00:06:47s. Time for last 1,000,000: 1s. Last read position: chr7:35,832,888 INFO 2026-06-08 08:44:57 MarkDuplicates Tracking 1046653 as yet unmatched pairs. 58520 records in RAM. INFO 2026-06-08 08:44:59 MarkDuplicates Read 231,000,000 records. Elapsed time: 00:06:49s. Time for last 1,000,000: 1s. Last read position: chr7:44,074,448 INFO 2026-06-08 08:44:59 MarkDuplicates Tracking 1043656 as yet unmatched pairs. 55493 records in RAM. INFO 2026-06-08 08:45:01 MarkDuplicates Read 232,000,000 records. Elapsed time: 00:06:51s. Time for last 1,000,000: 1s. Last read position: chr7:44,121,893 INFO 2026-06-08 08:45:01 MarkDuplicates Tracking 1041138 as yet unmatched pairs. 52968 records in RAM. INFO 2026-06-08 08:45:02 MarkDuplicates Read 233,000,000 records. Elapsed time: 00:06:52s. Time for last 1,000,000: 1s. Last read position: chr7:55,165,380 INFO 2026-06-08 08:45:02 MarkDuplicates Tracking 1038317 as yet unmatched pairs. 50115 records in RAM. INFO 2026-06-08 08:45:04 MarkDuplicates Read 234,000,000 records. Elapsed time: 00:06:54s. Time for last 1,000,000: 2s. Last read position: chr7:72,868,984 INFO 2026-06-08 08:45:04 MarkDuplicates Tracking 1035820 as yet unmatched pairs. 47577 records in RAM. INFO 2026-06-08 08:45:06 MarkDuplicates Read 235,000,000 records. Elapsed time: 00:06:56s. Time for last 1,000,000: 1s. Last read position: chr7:74,120,899 INFO 2026-06-08 08:45:06 MarkDuplicates Tracking 1034556 as yet unmatched pairs. 46273 records in RAM. INFO 2026-06-08 08:45:07 MarkDuplicates Read 236,000,000 records. Elapsed time: 00:06:57s. Time for last 1,000,000: 1s. Last read position: chr7:75,442,380 INFO 2026-06-08 08:45:07 MarkDuplicates Tracking 1033037 as yet unmatched pairs. 44739 records in RAM. INFO 2026-06-08 08:45:08 MarkDuplicates Read 237,000,000 records. Elapsed time: 00:06:58s. Time for last 1,000,000: 1s. Last read position: chr7:77,262,227 INFO 2026-06-08 08:45:08 MarkDuplicates Tracking 1030536 as yet unmatched pairs. 42217 records in RAM. INFO 2026-06-08 08:45:11 MarkDuplicates Read 238,000,000 records. Elapsed time: 00:07:01s. Time for last 1,000,000: 2s. Last read position: chr7:92,061,284 INFO 2026-06-08 08:45:11 MarkDuplicates Tracking 1029185 as yet unmatched pairs. 40827 records in RAM. INFO 2026-06-08 08:45:13 MarkDuplicates Read 239,000,000 records. Elapsed time: 00:07:03s. Time for last 1,000,000: 2s. Last read position: chr7:94,404,731 INFO 2026-06-08 08:45:13 MarkDuplicates Tracking 1042608 as yet unmatched pairs. 54228 records in RAM. INFO 2026-06-08 08:45:15 MarkDuplicates Read 240,000,000 records. Elapsed time: 00:07:05s. Time for last 1,000,000: 1s. Last read position: chr7:94,416,458 INFO 2026-06-08 08:45:15 MarkDuplicates Tracking 1037039 as yet unmatched pairs. 48645 records in RAM. INFO 2026-06-08 08:45:16 MarkDuplicates Read 241,000,000 records. Elapsed time: 00:07:06s. Time for last 1,000,000: 1s. Last read position: chr7:94,428,310 INFO 2026-06-08 08:45:16 MarkDuplicates Tracking 1025031 as yet unmatched pairs. 36615 records in RAM. INFO 2026-06-08 08:45:18 MarkDuplicates Read 242,000,000 records. Elapsed time: 00:07:08s. Time for last 1,000,000: 1s. Last read position: chr7:99,392,694 INFO 2026-06-08 08:45:18 MarkDuplicates Tracking 1017035 as yet unmatched pairs. 28588 records in RAM. INFO 2026-06-08 08:45:20 MarkDuplicates Read 243,000,000 records. Elapsed time: 00:07:10s. Time for last 1,000,000: 1s. Last read position: chr7:100,572,541 INFO 2026-06-08 08:45:20 MarkDuplicates Tracking 1014564 as yet unmatched pairs. 26105 records in RAM. INFO 2026-06-08 08:45:21 MarkDuplicates Read 244,000,000 records. Elapsed time: 00:07:11s. Time for last 1,000,000: 1s. Last read position: chr7:102,355,864 INFO 2026-06-08 08:45:21 MarkDuplicates Tracking 1011791 as yet unmatched pairs. 23318 records in RAM. INFO 2026-06-08 08:45:22 MarkDuplicates Read 245,000,000 records. Elapsed time: 00:07:12s. Time for last 1,000,000: 1s. Last read position: chr7:103,119,739 INFO 2026-06-08 08:45:22 MarkDuplicates Tracking 1010659 as yet unmatched pairs. 22177 records in RAM. INFO 2026-06-08 08:45:24 MarkDuplicates Read 246,000,000 records. Elapsed time: 00:07:14s. Time for last 1,000,000: 1s. Last read position: chr7:107,998,485 INFO 2026-06-08 08:45:24 MarkDuplicates Tracking 1009058 as yet unmatched pairs. 20536 records in RAM. INFO 2026-06-08 08:46:25 MarkDuplicates Read 247,000,000 records. Elapsed time: 00:08:15s. Time for last 1,000,000: 61s. Last read position: chr7:127,702,467 INFO 2026-06-08 08:46:25 MarkDuplicates Tracking 1011204 as yet unmatched pairs. 22642 records in RAM. INFO 2026-06-08 08:46:27 MarkDuplicates Read 248,000,000 records. Elapsed time: 00:08:17s. Time for last 1,000,000: 1s. Last read position: chr7:128,767,605 INFO 2026-06-08 08:46:27 MarkDuplicates Tracking 1004304 as yet unmatched pairs. 15722 records in RAM. INFO 2026-06-08 08:46:29 MarkDuplicates Read 249,000,000 records. Elapsed time: 00:08:19s. Time for last 1,000,000: 1s. Last read position: chr7:135,950,638 INFO 2026-06-08 08:46:29 MarkDuplicates Tracking 1001383 as yet unmatched pairs. 12765 records in RAM. INFO 2026-06-08 08:46:30 MarkDuplicates Read 250,000,000 records. Elapsed time: 00:08:20s. Time for last 1,000,000: 1s. Last read position: chr7:139,716,873 INFO 2026-06-08 08:46:30 MarkDuplicates Tracking 999682 as yet unmatched pairs. 11050 records in RAM. INFO 2026-06-08 08:46:32 MarkDuplicates Read 251,000,000 records. Elapsed time: 00:08:22s. Time for last 1,000,000: 1s. Last read position: chr7:143,863,652 INFO 2026-06-08 08:46:32 MarkDuplicates Tracking 995919 as yet unmatched pairs. 7263 records in RAM. INFO 2026-06-08 08:46:33 MarkDuplicates Read 252,000,000 records. Elapsed time: 00:08:23s. Time for last 1,000,000: 1s. Last read position: chr7:151,028,600 INFO 2026-06-08 08:46:33 MarkDuplicates Tracking 993629 as yet unmatched pairs. 4963 records in RAM. INFO 2026-06-08 08:46:35 MarkDuplicates Read 253,000,000 records. Elapsed time: 00:08:25s. Time for last 1,000,000: 1s. Last read position: chr7:152,262,862 INFO 2026-06-08 08:46:35 MarkDuplicates Tracking 991259 as yet unmatched pairs. 2579 records in RAM. INFO 2026-06-08 08:46:37 MarkDuplicates Read 254,000,000 records. Elapsed time: 00:08:27s. Time for last 1,000,000: 2s. Last read position: chr8:11,809,749 INFO 2026-06-08 08:46:37 MarkDuplicates Tracking 989204 as yet unmatched pairs. 89141 records in RAM. INFO 2026-06-08 08:46:38 MarkDuplicates Read 255,000,000 records. Elapsed time: 00:08:28s. Time for last 1,000,000: 1s. Last read position: chr8:19,458,565 INFO 2026-06-08 08:46:38 MarkDuplicates Tracking 985493 as yet unmatched pairs. 85415 records in RAM. INFO 2026-06-08 08:46:40 MarkDuplicates Read 256,000,000 records. Elapsed time: 00:08:30s. Time for last 1,000,000: 1s. Last read position: chr8:26,354,479 INFO 2026-06-08 08:46:40 MarkDuplicates Tracking 982967 as yet unmatched pairs. 82841 records in RAM. INFO 2026-06-08 08:46:41 MarkDuplicates Read 257,000,000 records. Elapsed time: 00:08:31s. Time for last 1,000,000: 1s. Last read position: chr8:37,844,533 INFO 2026-06-08 08:46:41 MarkDuplicates Tracking 979802 as yet unmatched pairs. 79657 records in RAM. INFO 2026-06-08 08:46:43 MarkDuplicates Read 258,000,000 records. Elapsed time: 00:08:33s. Time for last 1,000,000: 1s. Last read position: chr8:38,842,366 INFO 2026-06-08 08:46:43 MarkDuplicates Tracking 978914 as yet unmatched pairs. 78761 records in RAM. INFO 2026-06-08 08:46:45 MarkDuplicates Read 259,000,000 records. Elapsed time: 00:08:34s. Time for last 1,000,000: 1s. Last read position: chr8:47,737,462 INFO 2026-06-08 08:46:45 MarkDuplicates Tracking 975067 as yet unmatched pairs. 74891 records in RAM. INFO 2026-06-08 08:46:46 MarkDuplicates Read 260,000,000 records. Elapsed time: 00:08:36s. Time for last 1,000,000: 1s. Last read position: chr8:52,642,434 INFO 2026-06-08 08:46:46 MarkDuplicates Tracking 972265 as yet unmatched pairs. 72070 records in RAM. INFO 2026-06-08 08:46:47 MarkDuplicates Read 261,000,000 records. Elapsed time: 00:08:37s. Time for last 1,000,000: 1s. Last read position: chr8:60,742,768 INFO 2026-06-08 08:46:47 MarkDuplicates Tracking 969969 as yet unmatched pairs. 69755 records in RAM. INFO 2026-06-08 08:46:49 MarkDuplicates Read 262,000,000 records. Elapsed time: 00:08:39s. Time for last 1,000,000: 2s. Last read position: chr8:67,059,334 INFO 2026-06-08 08:46:49 MarkDuplicates Tracking 967878 as yet unmatched pairs. 67627 records in RAM. INFO 2026-06-08 08:46:51 MarkDuplicates Read 263,000,000 records. Elapsed time: 00:08:41s. Time for last 1,000,000: 1s. Last read position: chr8:70,156,059 INFO 2026-06-08 08:46:51 MarkDuplicates Tracking 964884 as yet unmatched pairs. 64605 records in RAM. INFO 2026-06-08 08:46:53 MarkDuplicates Read 264,000,000 records. Elapsed time: 00:08:42s. Time for last 1,000,000: 1s. Last read position: chr8:76,855,728 INFO 2026-06-08 08:46:53 MarkDuplicates Tracking 962752 as yet unmatched pairs. 62467 records in RAM. INFO 2026-06-08 08:46:54 MarkDuplicates Read 265,000,000 records. Elapsed time: 00:08:44s. Time for last 1,000,000: 1s. Last read position: chr8:93,808,917 INFO 2026-06-08 08:46:54 MarkDuplicates Tracking 960388 as yet unmatched pairs. 60076 records in RAM. INFO 2026-06-08 08:46:56 MarkDuplicates Read 266,000,000 records. Elapsed time: 00:08:46s. Time for last 1,000,000: 1s. Last read position: chr8:97,816,057 INFO 2026-06-08 08:46:56 MarkDuplicates Tracking 959123 as yet unmatched pairs. 58783 records in RAM. INFO 2026-06-08 08:46:57 MarkDuplicates Read 267,000,000 records. Elapsed time: 00:08:47s. Time for last 1,000,000: 1s. Last read position: chr8:100,258,607 INFO 2026-06-08 08:46:57 MarkDuplicates Tracking 956040 as yet unmatched pairs. 55673 records in RAM. INFO 2026-06-08 08:46:59 MarkDuplicates Read 268,000,000 records. Elapsed time: 00:08:49s. Time for last 1,000,000: 1s. Last read position: chr8:100,715,461 INFO 2026-06-08 08:46:59 MarkDuplicates Tracking 960172 as yet unmatched pairs. 59778 records in RAM. INFO 2026-06-08 08:47:00 MarkDuplicates Read 269,000,000 records. Elapsed time: 00:08:50s. Time for last 1,000,000: 1s. Last read position: chr8:102,288,230 INFO 2026-06-08 08:47:00 MarkDuplicates Tracking 950849 as yet unmatched pairs. 50412 records in RAM. INFO 2026-06-08 08:47:01 MarkDuplicates Read 270,000,000 records. Elapsed time: 00:08:51s. Time for last 1,000,000: 1s. Last read position: chr8:108,239,992 INFO 2026-06-08 08:47:01 MarkDuplicates Tracking 956660 as yet unmatched pairs. 56203 records in RAM. INFO 2026-06-08 08:47:03 MarkDuplicates Read 271,000,000 records. Elapsed time: 00:08:53s. Time for last 1,000,000: 1s. Last read position: chr8:115,604,112 INFO 2026-06-08 08:47:03 MarkDuplicates Tracking 958813 as yet unmatched pairs. 58284 records in RAM. INFO 2026-06-08 08:47:05 MarkDuplicates Read 272,000,000 records. Elapsed time: 00:08:55s. Time for last 1,000,000: 1s. Last read position: chr8:115,623,563 INFO 2026-06-08 08:47:05 MarkDuplicates Tracking 953184 as yet unmatched pairs. 52637 records in RAM. INFO 2026-06-08 08:47:06 MarkDuplicates Read 273,000,000 records. Elapsed time: 00:08:56s. Time for last 1,000,000: 1s. Last read position: chr8:123,534,794 INFO 2026-06-08 08:47:06 MarkDuplicates Tracking 941600 as yet unmatched pairs. 41008 records in RAM. INFO 2026-06-08 08:47:08 MarkDuplicates Read 274,000,000 records. Elapsed time: 00:08:58s. Time for last 1,000,000: 1s. Last read position: chr8:127,738,903 INFO 2026-06-08 08:47:08 MarkDuplicates Tracking 940122 as yet unmatched pairs. 39508 records in RAM. INFO 2026-06-08 08:47:09 MarkDuplicates Read 275,000,000 records. Elapsed time: 00:08:59s. Time for last 1,000,000: 1s. Last read position: chr8:140,300,504 INFO 2026-06-08 08:47:09 MarkDuplicates Tracking 935771 as yet unmatched pairs. 35106 records in RAM. INFO 2026-06-08 08:47:11 MarkDuplicates Read 276,000,000 records. Elapsed time: 00:09:01s. Time for last 1,000,000: 1s. Last read position: chr8:143,507,869 INFO 2026-06-08 08:47:11 MarkDuplicates Tracking 932386 as yet unmatched pairs. 31679 records in RAM. INFO 2026-06-08 08:47:13 MarkDuplicates Read 277,000,000 records. Elapsed time: 00:09:03s. Time for last 1,000,000: 1s. Last read position: chr8:143,728,225 INFO 2026-06-08 08:47:13 MarkDuplicates Tracking 929440 as yet unmatched pairs. 28711 records in RAM. INFO 2026-06-08 08:47:14 MarkDuplicates Read 278,000,000 records. Elapsed time: 00:09:04s. Time for last 1,000,000: 1s. Last read position: chr8:143,858,290 INFO 2026-06-08 08:47:14 MarkDuplicates Tracking 927313 as yet unmatched pairs. 26576 records in RAM. INFO 2026-06-08 08:47:15 MarkDuplicates Read 279,000,000 records. Elapsed time: 00:09:05s. Time for last 1,000,000: 1s. Last read position: chr8:143,859,610 INFO 2026-06-08 08:47:15 MarkDuplicates Tracking 928929 as yet unmatched pairs. 28183 records in RAM. INFO 2026-06-08 08:47:16 MarkDuplicates Read 280,000,000 records. Elapsed time: 00:09:06s. Time for last 1,000,000: 1s. Last read position: chr8:143,860,723 INFO 2026-06-08 08:47:16 MarkDuplicates Tracking 928829 as yet unmatched pairs. 28083 records in RAM. INFO 2026-06-08 08:47:17 MarkDuplicates Read 281,000,000 records. Elapsed time: 00:09:07s. Time for last 1,000,000: 0s. Last read position: chr8:143,861,602 INFO 2026-06-08 08:47:17 MarkDuplicates Tracking 925691 as yet unmatched pairs. 24944 records in RAM. INFO 2026-06-08 08:47:18 MarkDuplicates Read 282,000,000 records. Elapsed time: 00:09:08s. Time for last 1,000,000: 1s. Last read position: chr8:143,862,907 INFO 2026-06-08 08:47:18 MarkDuplicates Tracking 932705 as yet unmatched pairs. 31953 records in RAM. INFO 2026-06-08 08:47:20 MarkDuplicates Read 283,000,000 records. Elapsed time: 00:09:10s. Time for last 1,000,000: 1s. Last read position: chr8:143,863,789 INFO 2026-06-08 08:47:20 MarkDuplicates Tracking 920962 as yet unmatched pairs. 20197 records in RAM. INFO 2026-06-08 08:47:21 MarkDuplicates Read 284,000,000 records. Elapsed time: 00:09:11s. Time for last 1,000,000: 1s. Last read position: chr8:143,864,903 INFO 2026-06-08 08:47:21 MarkDuplicates Tracking 921715 as yet unmatched pairs. 20949 records in RAM. INFO 2026-06-08 08:47:22 MarkDuplicates Read 285,000,000 records. Elapsed time: 00:09:11s. Time for last 1,000,000: 0s. Last read position: chr8:143,866,204 INFO 2026-06-08 08:47:22 MarkDuplicates Tracking 920257 as yet unmatched pairs. 19491 records in RAM. INFO 2026-06-08 08:47:23 MarkDuplicates Read 286,000,000 records. Elapsed time: 00:09:13s. Time for last 1,000,000: 1s. Last read position: chr8:143,869,779 INFO 2026-06-08 08:47:23 MarkDuplicates Tracking 920781 as yet unmatched pairs. 20004 records in RAM. INFO 2026-06-08 08:47:24 MarkDuplicates Read 287,000,000 records. Elapsed time: 00:09:14s. Time for last 1,000,000: 1s. Last read position: chr8:143,919,332 INFO 2026-06-08 08:47:24 MarkDuplicates Tracking 921418 as yet unmatched pairs. 20617 records in RAM. INFO 2026-06-08 08:47:26 MarkDuplicates Read 288,000,000 records. Elapsed time: 00:09:16s. Time for last 1,000,000: 1s. Last read position: chr8:143,930,261 INFO 2026-06-08 08:47:26 MarkDuplicates Tracking 913396 as yet unmatched pairs. 12580 records in RAM. INFO 2026-06-08 08:47:28 MarkDuplicates Read 289,000,000 records. Elapsed time: 00:09:17s. Time for last 1,000,000: 1s. Last read position: chr8:144,163,773 INFO 2026-06-08 08:47:28 MarkDuplicates Tracking 908880 as yet unmatched pairs. 8047 records in RAM. INFO 2026-06-08 08:47:29 MarkDuplicates Read 290,000,000 records. Elapsed time: 00:09:19s. Time for last 1,000,000: 1s. Last read position: chr8:144,436,844 INFO 2026-06-08 08:47:29 MarkDuplicates Tracking 905255 as yet unmatched pairs. 4395 records in RAM. INFO 2026-06-08 08:47:30 MarkDuplicates Read 291,000,000 records. Elapsed time: 00:09:20s. Time for last 1,000,000: 1s. Last read position: chr8:144,791,993 INFO 2026-06-08 08:47:30 MarkDuplicates Tracking 904127 as yet unmatched pairs. 3250 records in RAM. INFO 2026-06-08 08:47:32 MarkDuplicates Read 292,000,000 records. Elapsed time: 00:09:22s. Time for last 1,000,000: 1s. Last read position: chr9:5,924,670 INFO 2026-06-08 08:47:32 MarkDuplicates Tracking 899443 as yet unmatched pairs. 51985 records in RAM. INFO 2026-06-08 08:47:34 MarkDuplicates Read 293,000,000 records. Elapsed time: 00:09:24s. Time for last 1,000,000: 2s. Last read position: chr9:19,116,373 INFO 2026-06-08 08:47:34 MarkDuplicates Tracking 897741 as yet unmatched pairs. 50226 records in RAM. INFO 2026-06-08 08:47:37 MarkDuplicates Read 294,000,000 records. Elapsed time: 00:09:27s. Time for last 1,000,000: 2s. Last read position: chr9:33,675,433 INFO 2026-06-08 08:47:37 MarkDuplicates Tracking 894429 as yet unmatched pairs. 46889 records in RAM. INFO 2026-06-08 08:47:39 MarkDuplicates Read 295,000,000 records. Elapsed time: 00:09:29s. Time for last 1,000,000: 1s. Last read position: chr9:35,712,029 INFO 2026-06-08 08:47:39 MarkDuplicates Tracking 892098 as yet unmatched pairs. 44525 records in RAM. INFO 2026-06-08 08:47:40 MarkDuplicates Read 296,000,000 records. Elapsed time: 00:09:30s. Time for last 1,000,000: 1s. Last read position: chr9:68,256,921 INFO 2026-06-08 08:47:40 MarkDuplicates Tracking 889873 as yet unmatched pairs. 42264 records in RAM. INFO 2026-06-08 08:47:42 MarkDuplicates Read 297,000,000 records. Elapsed time: 00:09:32s. Time for last 1,000,000: 1s. Last read position: chr9:87,728,679 INFO 2026-06-08 08:47:42 MarkDuplicates Tracking 887770 as yet unmatched pairs. 40130 records in RAM. INFO 2026-06-08 08:47:44 MarkDuplicates Read 298,000,000 records. Elapsed time: 00:09:33s. Time for last 1,000,000: 1s. Last read position: chr9:96,013,073 INFO 2026-06-08 08:47:44 MarkDuplicates Tracking 884420 as yet unmatched pairs. 36762 records in RAM. INFO 2026-06-08 08:47:45 MarkDuplicates Read 299,000,000 records. Elapsed time: 00:09:35s. Time for last 1,000,000: 1s. Last read position: chr9:105,521,106 INFO 2026-06-08 08:47:45 MarkDuplicates Tracking 881968 as yet unmatched pairs. 34273 records in RAM. INFO 2026-06-08 08:47:46 MarkDuplicates Read 300,000,000 records. Elapsed time: 00:09:36s. Time for last 1,000,000: 1s. Last read position: chr9:114,093,377 INFO 2026-06-08 08:47:46 MarkDuplicates Tracking 880227 as yet unmatched pairs. 32467 records in RAM. INFO 2026-06-08 08:47:48 MarkDuplicates Read 301,000,000 records. Elapsed time: 00:09:38s. Time for last 1,000,000: 1s. Last read position: chr9:115,086,512 INFO 2026-06-08 08:47:48 MarkDuplicates Tracking 878776 as yet unmatched pairs. 30990 records in RAM. INFO 2026-06-08 08:47:50 MarkDuplicates Read 302,000,000 records. Elapsed time: 00:09:40s. Time for last 1,000,000: 1s. Last read position: chr9:122,986,255 INFO 2026-06-08 08:47:50 MarkDuplicates Tracking 874651 as yet unmatched pairs. 26842 records in RAM. INFO 2026-06-08 08:47:51 MarkDuplicates Read 303,000,000 records. Elapsed time: 00:09:41s. Time for last 1,000,000: 1s. Last read position: chr9:127,454,927 INFO 2026-06-08 08:47:51 MarkDuplicates Tracking 872284 as yet unmatched pairs. 24450 records in RAM. INFO 2026-06-08 08:47:53 MarkDuplicates Read 304,000,000 records. Elapsed time: 00:09:43s. Time for last 1,000,000: 1s. Last read position: chr9:128,473,644 INFO 2026-06-08 08:47:53 MarkDuplicates Tracking 868817 as yet unmatched pairs. 20957 records in RAM. INFO 2026-06-08 08:47:56 MarkDuplicates Read 305,000,000 records. Elapsed time: 00:09:46s. Time for last 1,000,000: 3s. Last read position: chr9:129,134,840 INFO 2026-06-08 08:47:56 MarkDuplicates Tracking 866414 as yet unmatched pairs. 18524 records in RAM. INFO 2026-06-08 08:47:58 MarkDuplicates Read 306,000,000 records. Elapsed time: 00:09:48s. Time for last 1,000,000: 1s. Last read position: chr9:131,464,867 INFO 2026-06-08 08:47:58 MarkDuplicates Tracking 864279 as yet unmatched pairs. 16361 records in RAM. INFO 2026-06-08 08:48:01 MarkDuplicates Read 307,000,000 records. Elapsed time: 00:09:51s. Time for last 1,000,000: 2s. Last read position: chr9:133,349,031 INFO 2026-06-08 08:48:01 MarkDuplicates Tracking 862869 as yet unmatched pairs. 14932 records in RAM. INFO 2026-06-08 08:48:03 MarkDuplicates Read 308,000,000 records. Elapsed time: 00:09:53s. Time for last 1,000,000: 1s. Last read position: chr9:134,784,908 INFO 2026-06-08 08:48:03 MarkDuplicates Tracking 858626 as yet unmatched pairs. 10662 records in RAM. INFO 2026-06-08 08:48:04 MarkDuplicates Read 309,000,000 records. Elapsed time: 00:09:54s. Time for last 1,000,000: 1s. Last read position: chr9:136,475,629 INFO 2026-06-08 08:48:04 MarkDuplicates Tracking 856065 as yet unmatched pairs. 8092 records in RAM. INFO 2026-06-08 08:48:06 MarkDuplicates Read 310,000,000 records. Elapsed time: 00:09:56s. Time for last 1,000,000: 1s. Last read position: chr9:137,040,376 INFO 2026-06-08 08:48:06 MarkDuplicates Tracking 853044 as yet unmatched pairs. 5053 records in RAM. INFO 2026-06-08 08:48:08 MarkDuplicates Read 311,000,000 records. Elapsed time: 00:09:58s. Time for last 1,000,000: 1s. Last read position: chr9:137,716,967 INFO 2026-06-08 08:48:08 MarkDuplicates Tracking 849362 as yet unmatched pairs. 1362 records in RAM. INFO 2026-06-08 08:48:10 MarkDuplicates Read 312,000,000 records. Elapsed time: 00:10:00s. Time for last 1,000,000: 2s. Last read position: chr10:5,754,960 INFO 2026-06-08 08:48:10 MarkDuplicates Tracking 846144 as yet unmatched pairs. 49702 records in RAM. INFO 2026-06-08 08:48:11 MarkDuplicates Read 313,000,000 records. Elapsed time: 00:10:01s. Time for last 1,000,000: 1s. Last read position: chr10:12,035,339 INFO 2026-06-08 08:48:11 MarkDuplicates Tracking 843670 as yet unmatched pairs. 47198 records in RAM. INFO 2026-06-08 08:48:13 MarkDuplicates Read 314,000,000 records. Elapsed time: 00:10:03s. Time for last 1,000,000: 1s. Last read position: chr10:17,906,947 INFO 2026-06-08 08:48:13 MarkDuplicates Tracking 840688 as yet unmatched pairs. 44169 records in RAM. INFO 2026-06-08 08:48:15 MarkDuplicates Read 315,000,000 records. Elapsed time: 00:10:05s. Time for last 1,000,000: 1s. Last read position: chr10:24,585,782 INFO 2026-06-08 08:48:15 MarkDuplicates Tracking 839672 as yet unmatched pairs. 43113 records in RAM. INFO 2026-06-08 08:48:17 MarkDuplicates Read 316,000,000 records. Elapsed time: 00:10:07s. Time for last 1,000,000: 1s. Last read position: chr10:31,510,788 INFO 2026-06-08 08:48:17 MarkDuplicates Tracking 836248 as yet unmatched pairs. 39671 records in RAM. INFO 2026-06-08 08:48:18 MarkDuplicates Read 317,000,000 records. Elapsed time: 00:10:08s. Time for last 1,000,000: 1s. Last read position: chr10:32,911,644 INFO 2026-06-08 08:48:18 MarkDuplicates Tracking 835479 as yet unmatched pairs. 38899 records in RAM. INFO 2026-06-08 08:48:20 MarkDuplicates Read 318,000,000 records. Elapsed time: 00:10:09s. Time for last 1,000,000: 1s. Last read position: chr10:42,793,894 INFO 2026-06-08 08:48:20 MarkDuplicates Tracking 831469 as yet unmatched pairs. 34872 records in RAM. INFO 2026-06-08 08:48:21 MarkDuplicates Read 319,000,000 records. Elapsed time: 00:10:11s. Time for last 1,000,000: 1s. Last read position: chr10:48,374,551 INFO 2026-06-08 08:48:21 MarkDuplicates Tracking 829530 as yet unmatched pairs. 32913 records in RAM. INFO 2026-06-08 08:48:22 MarkDuplicates Read 320,000,000 records. Elapsed time: 00:10:12s. Time for last 1,000,000: 1s. Last read position: chr10:63,343,745 INFO 2026-06-08 08:48:22 MarkDuplicates Tracking 827064 as yet unmatched pairs. 30426 records in RAM. INFO 2026-06-08 08:48:24 MarkDuplicates Read 321,000,000 records. Elapsed time: 00:10:14s. Time for last 1,000,000: 1s. Last read position: chr10:71,299,193 INFO 2026-06-08 08:48:24 MarkDuplicates Tracking 824640 as yet unmatched pairs. 27973 records in RAM. INFO 2026-06-08 08:48:25 MarkDuplicates Read 322,000,000 records. Elapsed time: 00:10:15s. Time for last 1,000,000: 1s. Last read position: chr10:73,815,223 INFO 2026-06-08 08:48:25 MarkDuplicates Tracking 822035 as yet unmatched pairs. 25351 records in RAM. INFO 2026-06-08 08:48:27 MarkDuplicates Read 323,000,000 records. Elapsed time: 00:10:17s. Time for last 1,000,000: 1s. Last read position: chr10:77,817,828 INFO 2026-06-08 08:48:27 MarkDuplicates Tracking 824687 as yet unmatched pairs. 27968 records in RAM. INFO 2026-06-08 08:48:28 MarkDuplicates Read 324,000,000 records. Elapsed time: 00:10:18s. Time for last 1,000,000: 1s. Last read position: chr10:78,035,689 INFO 2026-06-08 08:48:28 MarkDuplicates Tracking 831760 as yet unmatched pairs. 35028 records in RAM. INFO 2026-06-08 08:48:30 MarkDuplicates Read 325,000,000 records. Elapsed time: 00:10:20s. Time for last 1,000,000: 1s. Last read position: chr10:86,500,596 INFO 2026-06-08 08:48:30 MarkDuplicates Tracking 814404 as yet unmatched pairs. 17663 records in RAM. INFO 2026-06-08 08:48:31 MarkDuplicates Read 326,000,000 records. Elapsed time: 00:10:21s. Time for last 1,000,000: 1s. Last read position: chr10:92,028,793 INFO 2026-06-08 08:48:31 MarkDuplicates Tracking 811872 as yet unmatched pairs. 15108 records in RAM. INFO 2026-06-08 08:48:33 MarkDuplicates Read 327,000,000 records. Elapsed time: 00:10:23s. Time for last 1,000,000: 1s. Last read position: chr10:97,459,233 INFO 2026-06-08 08:48:33 MarkDuplicates Tracking 809692 as yet unmatched pairs. 12915 records in RAM. INFO 2026-06-08 08:48:35 MarkDuplicates Read 328,000,000 records. Elapsed time: 00:10:25s. Time for last 1,000,000: 1s. Last read position: chr10:102,159,494 INFO 2026-06-08 08:48:35 MarkDuplicates Tracking 806801 as yet unmatched pairs. 9989 records in RAM. INFO 2026-06-08 08:48:36 MarkDuplicates Read 329,000,000 records. Elapsed time: 00:10:26s. Time for last 1,000,000: 1s. Last read position: chr10:110,901,594 INFO 2026-06-08 08:48:36 MarkDuplicates Tracking 804261 as yet unmatched pairs. 7416 records in RAM. INFO 2026-06-08 08:48:38 MarkDuplicates Read 330,000,000 records. Elapsed time: 00:10:28s. Time for last 1,000,000: 1s. Last read position: chr10:119,651,762 INFO 2026-06-08 08:48:38 MarkDuplicates Tracking 801896 as yet unmatched pairs. 5037 records in RAM. INFO 2026-06-08 08:48:39 MarkDuplicates Read 331,000,000 records. Elapsed time: 00:10:29s. Time for last 1,000,000: 1s. Last read position: chr10:125,841,253 INFO 2026-06-08 08:48:39 MarkDuplicates Tracking 799524 as yet unmatched pairs. 2644 records in RAM. INFO 2026-06-08 08:48:42 MarkDuplicates Read 332,000,000 records. Elapsed time: 00:10:32s. Time for last 1,000,000: 2s. Last read position: chr11:235,987 INFO 2026-06-08 08:48:42 MarkDuplicates Tracking 796826 as yet unmatched pairs. 108185 records in RAM. INFO 2026-06-08 08:48:43 MarkDuplicates Read 333,000,000 records. Elapsed time: 00:10:33s. Time for last 1,000,000: 1s. Last read position: chr11:319,753 INFO 2026-06-08 08:48:43 MarkDuplicates Tracking 799752 as yet unmatched pairs. 111106 records in RAM. INFO 2026-06-08 08:48:45 MarkDuplicates Read 334,000,000 records. Elapsed time: 00:10:35s. Time for last 1,000,000: 1s. Last read position: chr11:681,015 INFO 2026-06-08 08:48:45 MarkDuplicates Tracking 791213 as yet unmatched pairs. 102555 records in RAM. INFO 2026-06-08 08:48:47 MarkDuplicates Read 335,000,000 records. Elapsed time: 00:10:37s. Time for last 1,000,000: 2s. Last read position: chr11:1,016,609 INFO 2026-06-08 08:48:47 MarkDuplicates Tracking 790818 as yet unmatched pairs. 102140 records in RAM. INFO 2026-06-08 08:48:49 MarkDuplicates Read 336,000,000 records. Elapsed time: 00:10:39s. Time for last 1,000,000: 1s. Last read position: chr11:1,032,011 INFO 2026-06-08 08:48:49 MarkDuplicates Tracking 786902 as yet unmatched pairs. 98220 records in RAM. INFO 2026-06-08 08:48:50 MarkDuplicates Read 337,000,000 records. Elapsed time: 00:10:40s. Time for last 1,000,000: 1s. Last read position: chr11:1,229,227 INFO 2026-06-08 08:48:50 MarkDuplicates Tracking 784775 as yet unmatched pairs. 96091 records in RAM. INFO 2026-06-08 08:48:52 MarkDuplicates Read 338,000,000 records. Elapsed time: 00:10:42s. Time for last 1,000,000: 1s. Last read position: chr11:1,243,127 INFO 2026-06-08 08:48:52 MarkDuplicates Tracking 782503 as yet unmatched pairs. 93814 records in RAM. INFO 2026-06-08 08:48:53 MarkDuplicates Read 339,000,000 records. Elapsed time: 00:10:43s. Time for last 1,000,000: 1s. Last read position: chr11:1,244,281 INFO 2026-06-08 08:48:53 MarkDuplicates Tracking 786266 as yet unmatched pairs. 97574 records in RAM. INFO 2026-06-08 08:48:55 MarkDuplicates Read 340,000,000 records. Elapsed time: 00:10:45s. Time for last 1,000,000: 1s. Last read position: chr11:1,245,276 INFO 2026-06-08 08:48:55 MarkDuplicates Tracking 782853 as yet unmatched pairs. 94161 records in RAM. INFO 2026-06-08 08:48:56 MarkDuplicates Read 341,000,000 records. Elapsed time: 00:10:46s. Time for last 1,000,000: 1s. Last read position: chr11:1,246,980 INFO 2026-06-08 08:48:56 MarkDuplicates Tracking 780896 as yet unmatched pairs. 92202 records in RAM. INFO 2026-06-08 08:48:57 MarkDuplicates Read 342,000,000 records. Elapsed time: 00:10:47s. Time for last 1,000,000: 1s. Last read position: chr11:1,248,172 INFO 2026-06-08 08:48:57 MarkDuplicates Tracking 778263 as yet unmatched pairs. 89565 records in RAM. INFO 2026-06-08 08:48:58 MarkDuplicates Read 343,000,000 records. Elapsed time: 00:10:48s. Time for last 1,000,000: 1s. Last read position: chr11:1,249,443 INFO 2026-06-08 08:48:58 MarkDuplicates Tracking 778938 as yet unmatched pairs. 90240 records in RAM. INFO 2026-06-08 08:48:59 MarkDuplicates Read 344,000,000 records. Elapsed time: 00:10:49s. Time for last 1,000,000: 1s. Last read position: chr11:1,251,051 INFO 2026-06-08 08:48:59 MarkDuplicates Tracking 774593 as yet unmatched pairs. 85895 records in RAM. INFO 2026-06-08 08:49:01 MarkDuplicates Read 345,000,000 records. Elapsed time: 00:10:51s. Time for last 1,000,000: 1s. Last read position: chr11:1,761,441 INFO 2026-06-08 08:49:01 MarkDuplicates Tracking 771209 as yet unmatched pairs. 82505 records in RAM. INFO 2026-06-08 08:49:03 MarkDuplicates Read 346,000,000 records. Elapsed time: 00:10:53s. Time for last 1,000,000: 1s. Last read position: chr11:6,478,561 INFO 2026-06-08 08:49:03 MarkDuplicates Tracking 768566 as yet unmatched pairs. 79841 records in RAM. INFO 2026-06-08 08:49:04 MarkDuplicates Read 347,000,000 records. Elapsed time: 00:10:54s. Time for last 1,000,000: 1s. Last read position: chr11:9,204,065 INFO 2026-06-08 08:49:04 MarkDuplicates Tracking 765388 as yet unmatched pairs. 76655 records in RAM. INFO 2026-06-08 08:49:06 MarkDuplicates Read 348,000,000 records. Elapsed time: 00:10:56s. Time for last 1,000,000: 1s. Last read position: chr11:12,216,227 INFO 2026-06-08 08:49:06 MarkDuplicates Tracking 762737 as yet unmatched pairs. 73998 records in RAM. INFO 2026-06-08 08:49:07 MarkDuplicates Read 349,000,000 records. Elapsed time: 00:10:57s. Time for last 1,000,000: 1s. Last read position: chr11:18,402,962 INFO 2026-06-08 08:49:07 MarkDuplicates Tracking 763173 as yet unmatched pairs. 74409 records in RAM. INFO 2026-06-08 08:49:09 MarkDuplicates Read 350,000,000 records. Elapsed time: 00:10:59s. Time for last 1,000,000: 1s. Last read position: chr11:33,706,458 INFO 2026-06-08 08:49:09 MarkDuplicates Tracking 757486 as yet unmatched pairs. 68703 records in RAM. INFO 2026-06-08 08:49:10 MarkDuplicates Read 351,000,000 records. Elapsed time: 00:11:00s. Time for last 1,000,000: 1s. Last read position: chr11:44,936,680 INFO 2026-06-08 08:49:10 MarkDuplicates Tracking 756688 as yet unmatched pairs. 67883 records in RAM. INFO 2026-06-08 08:49:12 MarkDuplicates Read 352,000,000 records. Elapsed time: 00:11:02s. Time for last 1,000,000: 1s. Last read position: chr11:47,178,915 INFO 2026-06-08 08:49:12 MarkDuplicates Tracking 752416 as yet unmatched pairs. 63603 records in RAM. INFO 2026-06-08 08:49:13 MarkDuplicates Read 353,000,000 records. Elapsed time: 00:11:03s. Time for last 1,000,000: 1s. Last read position: chr11:57,414,950 INFO 2026-06-08 08:49:13 MarkDuplicates Tracking 749797 as yet unmatched pairs. 60968 records in RAM. INFO 2026-06-08 08:49:15 MarkDuplicates Read 354,000,000 records. Elapsed time: 00:11:05s. Time for last 1,000,000: 1s. Last read position: chr11:60,384,981 INFO 2026-06-08 08:49:15 MarkDuplicates Tracking 748515 as yet unmatched pairs. 59685 records in RAM. INFO 2026-06-08 08:49:16 MarkDuplicates Read 355,000,000 records. Elapsed time: 00:11:06s. Time for last 1,000,000: 1s. Last read position: chr11:61,964,749 INFO 2026-06-08 08:49:16 MarkDuplicates Tracking 746668 as yet unmatched pairs. 57819 records in RAM. INFO 2026-06-08 08:49:18 MarkDuplicates Read 356,000,000 records. Elapsed time: 00:11:08s. Time for last 1,000,000: 1s. Last read position: chr11:62,270,984 INFO 2026-06-08 08:49:18 MarkDuplicates Tracking 782985 as yet unmatched pairs. 94118 records in RAM. INFO 2026-06-08 08:49:19 MarkDuplicates Read 357,000,000 records. Elapsed time: 00:11:09s. Time for last 1,000,000: 1s. Last read position: chr11:62,521,551 INFO 2026-06-08 08:49:19 MarkDuplicates Tracking 743038 as yet unmatched pairs. 54164 records in RAM. INFO 2026-06-08 08:49:21 MarkDuplicates Read 358,000,000 records. Elapsed time: 00:11:11s. Time for last 1,000,000: 1s. Last read position: chr11:62,527,490 INFO 2026-06-08 08:49:21 MarkDuplicates Tracking 741689 as yet unmatched pairs. 52810 records in RAM. INFO 2026-06-08 08:49:22 MarkDuplicates Read 359,000,000 records. Elapsed time: 00:11:12s. Time for last 1,000,000: 1s. Last read position: chr11:62,532,611 INFO 2026-06-08 08:49:22 MarkDuplicates Tracking 739232 as yet unmatched pairs. 50344 records in RAM. INFO 2026-06-08 08:49:24 MarkDuplicates Read 360,000,000 records. Elapsed time: 00:11:14s. Time for last 1,000,000: 1s. Last read position: chr11:62,786,274 INFO 2026-06-08 08:49:24 MarkDuplicates Tracking 732643 as yet unmatched pairs. 43751 records in RAM. INFO 2026-06-08 08:49:26 MarkDuplicates Read 361,000,000 records. Elapsed time: 00:11:15s. Time for last 1,000,000: 1s. Last read position: chr11:64,265,954 INFO 2026-06-08 08:49:26 MarkDuplicates Tracking 729975 as yet unmatched pairs. 41061 records in RAM. INFO 2026-06-08 08:49:27 MarkDuplicates Read 362,000,000 records. Elapsed time: 00:11:17s. Time for last 1,000,000: 1s. Last read position: chr11:65,289,810 INFO 2026-06-08 08:49:27 MarkDuplicates Tracking 726787 as yet unmatched pairs. 37866 records in RAM. INFO 2026-06-08 08:49:28 MarkDuplicates Read 363,000,000 records. Elapsed time: 00:11:18s. Time for last 1,000,000: 1s. Last read position: chr11:65,659,715 INFO 2026-06-08 08:49:28 MarkDuplicates Tracking 726034 as yet unmatched pairs. 37039 records in RAM. INFO 2026-06-08 08:49:30 MarkDuplicates Read 364,000,000 records. Elapsed time: 00:11:20s. Time for last 1,000,000: 1s. Last read position: chr11:66,514,436 INFO 2026-06-08 08:49:30 MarkDuplicates Tracking 721146 as yet unmatched pairs. 32139 records in RAM. INFO 2026-06-08 08:49:31 MarkDuplicates Read 365,000,000 records. Elapsed time: 00:11:21s. Time for last 1,000,000: 1s. Last read position: chr11:67,506,961 INFO 2026-06-08 08:49:31 MarkDuplicates Tracking 718388 as yet unmatched pairs. 29358 records in RAM. INFO 2026-06-08 08:49:33 MarkDuplicates Read 366,000,000 records. Elapsed time: 00:11:23s. Time for last 1,000,000: 1s. Last read position: chr11:69,648,054 INFO 2026-06-08 08:49:33 MarkDuplicates Tracking 719188 as yet unmatched pairs. 30150 records in RAM. INFO 2026-06-08 08:49:34 MarkDuplicates Read 367,000,000 records. Elapsed time: 00:11:24s. Time for last 1,000,000: 1s. Last read position: chr11:72,017,753 INFO 2026-06-08 08:49:34 MarkDuplicates Tracking 712983 as yet unmatched pairs. 23922 records in RAM. INFO 2026-06-08 08:49:36 MarkDuplicates Read 368,000,000 records. Elapsed time: 00:11:26s. Time for last 1,000,000: 1s. Last read position: chr11:74,949,328 INFO 2026-06-08 08:49:36 MarkDuplicates Tracking 710162 as yet unmatched pairs. 21071 records in RAM. INFO 2026-06-08 08:49:37 MarkDuplicates Read 369,000,000 records. Elapsed time: 00:11:27s. Time for last 1,000,000: 1s. Last read position: chr11:78,889,892 INFO 2026-06-08 08:49:37 MarkDuplicates Tracking 707108 as yet unmatched pairs. 17997 records in RAM. INFO 2026-06-08 08:49:39 MarkDuplicates Read 370,000,000 records. Elapsed time: 00:11:29s. Time for last 1,000,000: 1s. Last read position: chr11:95,836,207 INFO 2026-06-08 08:49:39 MarkDuplicates Tracking 704794 as yet unmatched pairs. 15650 records in RAM. INFO 2026-06-08 08:49:40 MarkDuplicates Read 371,000,000 records. Elapsed time: 00:11:30s. Time for last 1,000,000: 1s. Last read position: chr11:108,289,777 INFO 2026-06-08 08:49:40 MarkDuplicates Tracking 702396 as yet unmatched pairs. 13229 records in RAM. INFO 2026-06-08 08:49:42 MarkDuplicates Read 372,000,000 records. Elapsed time: 00:11:32s. Time for last 1,000,000: 1s. Last read position: chr11:117,204,269 INFO 2026-06-08 08:49:42 MarkDuplicates Tracking 700876 as yet unmatched pairs. 11695 records in RAM. INFO 2026-06-08 08:49:44 MarkDuplicates Read 373,000,000 records. Elapsed time: 00:11:34s. Time for last 1,000,000: 1s. Last read position: chr11:118,898,789 INFO 2026-06-08 08:49:44 MarkDuplicates Tracking 697195 as yet unmatched pairs. 8002 records in RAM. INFO 2026-06-08 08:49:45 MarkDuplicates Read 374,000,000 records. Elapsed time: 00:11:35s. Time for last 1,000,000: 1s. Last read position: chr11:120,481,557 INFO 2026-06-08 08:49:45 MarkDuplicates Tracking 695125 as yet unmatched pairs. 5921 records in RAM. INFO 2026-06-08 08:49:47 MarkDuplicates Read 375,000,000 records. Elapsed time: 00:11:37s. Time for last 1,000,000: 1s. Last read position: chr11:126,292,516 INFO 2026-06-08 08:49:47 MarkDuplicates Tracking 692054 as yet unmatched pairs. 2842 records in RAM. INFO 2026-06-08 08:49:48 MarkDuplicates Read 376,000,000 records. Elapsed time: 00:11:38s. Time for last 1,000,000: 1s. Last read position: chr11:134,249,218 INFO 2026-06-08 08:49:48 MarkDuplicates Tracking 689436 as yet unmatched pairs. 202 records in RAM. INFO 2026-06-08 08:49:51 MarkDuplicates Read 377,000,000 records. Elapsed time: 00:11:41s. Time for last 1,000,000: 2s. Last read position: chr12:884,181 INFO 2026-06-08 08:49:51 MarkDuplicates Tracking 690231 as yet unmatched pairs. 88516 records in RAM. INFO 2026-06-08 08:49:52 MarkDuplicates Read 378,000,000 records. Elapsed time: 00:11:42s. Time for last 1,000,000: 1s. Last read position: chr12:2,800,038 INFO 2026-06-08 08:49:52 MarkDuplicates Tracking 686559 as yet unmatched pairs. 84814 records in RAM. INFO 2026-06-08 08:49:54 MarkDuplicates Read 379,000,000 records. Elapsed time: 00:11:44s. Time for last 1,000,000: 1s. Last read position: chr12:6,348,958 INFO 2026-06-08 08:49:54 MarkDuplicates Tracking 682002 as yet unmatched pairs. 80243 records in RAM. INFO 2026-06-08 08:49:56 MarkDuplicates Read 380,000,000 records. Elapsed time: 00:11:46s. Time for last 1,000,000: 2s. Last read position: chr12:6,867,590 INFO 2026-06-08 08:49:56 MarkDuplicates Tracking 679031 as yet unmatched pairs. 77267 records in RAM. INFO 2026-06-08 08:49:57 MarkDuplicates Read 381,000,000 records. Elapsed time: 00:11:47s. Time for last 1,000,000: 1s. Last read position: chr12:7,497,084 INFO 2026-06-08 08:49:57 MarkDuplicates Tracking 677694 as yet unmatched pairs. 75922 records in RAM. INFO 2026-06-08 08:49:59 MarkDuplicates Read 382,000,000 records. Elapsed time: 00:11:49s. Time for last 1,000,000: 1s. Last read position: chr12:10,882,341 INFO 2026-06-08 08:49:59 MarkDuplicates Tracking 673906 as yet unmatched pairs. 72126 records in RAM. INFO 2026-06-08 08:50:01 MarkDuplicates Read 383,000,000 records. Elapsed time: 00:11:50s. Time for last 1,000,000: 1s. Last read position: chr12:14,424,297 INFO 2026-06-08 08:50:01 MarkDuplicates Tracking 673217 as yet unmatched pairs. 71421 records in RAM. INFO 2026-06-08 08:50:03 MarkDuplicates Read 384,000,000 records. Elapsed time: 00:11:53s. Time for last 1,000,000: 2s. Last read position: chr12:30,710,169 INFO 2026-06-08 08:50:03 MarkDuplicates Tracking 669023 as yet unmatched pairs. 67211 records in RAM. INFO 2026-06-08 08:50:05 MarkDuplicates Read 385,000,000 records. Elapsed time: 00:11:55s. Time for last 1,000,000: 1s. Last read position: chr12:46,371,194 INFO 2026-06-08 08:50:05 MarkDuplicates Tracking 666708 as yet unmatched pairs. 64858 records in RAM. INFO 2026-06-08 08:50:07 MarkDuplicates Read 386,000,000 records. Elapsed time: 00:11:57s. Time for last 1,000,000: 1s. Last read position: chr12:49,051,970 INFO 2026-06-08 08:50:07 MarkDuplicates Tracking 663956 as yet unmatched pairs. 62096 records in RAM. INFO 2026-06-08 08:50:09 MarkDuplicates Read 387,000,000 records. Elapsed time: 00:11:59s. Time for last 1,000,000: 1s. Last read position: chr12:49,791,926 INFO 2026-06-08 08:50:09 MarkDuplicates Tracking 661593 as yet unmatched pairs. 59722 records in RAM. INFO 2026-06-08 08:50:10 MarkDuplicates Read 388,000,000 records. Elapsed time: 00:12:00s. Time for last 1,000,000: 1s. Last read position: chr12:52,519,046 INFO 2026-06-08 08:50:10 MarkDuplicates Tracking 658896 as yet unmatched pairs. 56998 records in RAM. INFO 2026-06-08 08:50:12 MarkDuplicates Read 389,000,000 records. Elapsed time: 00:12:02s. Time for last 1,000,000: 1s. Last read position: chr12:53,307,661 INFO 2026-06-08 08:50:12 MarkDuplicates Tracking 656403 as yet unmatched pairs. 54499 records in RAM. INFO 2026-06-08 08:50:14 MarkDuplicates Read 390,000,000 records. Elapsed time: 00:12:04s. Time for last 1,000,000: 1s. Last read position: chr12:54,282,462 INFO 2026-06-08 08:50:14 MarkDuplicates Tracking 654728 as yet unmatched pairs. 52784 records in RAM. INFO 2026-06-08 08:50:15 MarkDuplicates Read 391,000,000 records. Elapsed time: 00:12:05s. Time for last 1,000,000: 1s. Last read position: chr12:56,152,623 INFO 2026-06-08 08:50:15 MarkDuplicates Tracking 651298 as yet unmatched pairs. 49344 records in RAM. INFO 2026-06-08 08:50:17 MarkDuplicates Read 392,000,000 records. Elapsed time: 00:12:07s. Time for last 1,000,000: 1s. Last read position: chr12:56,644,880 INFO 2026-06-08 08:50:17 MarkDuplicates Tracking 649815 as yet unmatched pairs. 47844 records in RAM. INFO 2026-06-08 08:50:19 MarkDuplicates Read 393,000,000 records. Elapsed time: 00:12:09s. Time for last 1,000,000: 1s. Last read position: chr12:57,154,580 INFO 2026-06-08 08:50:19 MarkDuplicates Tracking 647792 as yet unmatched pairs. 45808 records in RAM. INFO 2026-06-08 08:50:20 MarkDuplicates Read 394,000,000 records. Elapsed time: 00:12:10s. Time for last 1,000,000: 1s. Last read position: chr12:57,255,898 INFO 2026-06-08 08:50:20 MarkDuplicates Tracking 643314 as yet unmatched pairs. 41328 records in RAM. INFO 2026-06-08 08:50:22 MarkDuplicates Read 395,000,000 records. Elapsed time: 00:12:12s. Time for last 1,000,000: 1s. Last read position: chr12:64,111,852 INFO 2026-06-08 08:50:22 MarkDuplicates Tracking 640746 as yet unmatched pairs. 38749 records in RAM. INFO 2026-06-08 08:50:23 MarkDuplicates Read 396,000,000 records. Elapsed time: 00:12:13s. Time for last 1,000,000: 1s. Last read position: chr12:69,587,504 INFO 2026-06-08 08:50:23 MarkDuplicates Tracking 639215 as yet unmatched pairs. 37208 records in RAM. INFO 2026-06-08 08:50:25 MarkDuplicates Read 397,000,000 records. Elapsed time: 00:12:15s. Time for last 1,000,000: 1s. Last read position: chr12:88,084,698 INFO 2026-06-08 08:50:25 MarkDuplicates Tracking 635859 as yet unmatched pairs. 33815 records in RAM. INFO 2026-06-08 08:50:27 MarkDuplicates Read 398,000,000 records. Elapsed time: 00:12:16s. Time for last 1,000,000: 1s. Last read position: chr12:95,085,842 INFO 2026-06-08 08:50:27 MarkDuplicates Tracking 633558 as yet unmatched pairs. 31506 records in RAM. INFO 2026-06-08 08:50:28 MarkDuplicates Read 399,000,000 records. Elapsed time: 00:12:18s. Time for last 1,000,000: 1s. Last read position: chr12:101,634,581 INFO 2026-06-08 08:50:28 MarkDuplicates Tracking 630836 as yet unmatched pairs. 28769 records in RAM. INFO 2026-06-08 08:50:30 MarkDuplicates Read 400,000,000 records. Elapsed time: 00:12:20s. Time for last 1,000,000: 1s. Last read position: chr12:105,121,122 INFO 2026-06-08 08:50:30 MarkDuplicates Tracking 628873 as yet unmatched pairs. 26783 records in RAM. INFO 2026-06-08 08:50:31 MarkDuplicates Read 401,000,000 records. Elapsed time: 00:12:21s. Time for last 1,000,000: 1s. Last read position: chr12:109,938,438 INFO 2026-06-08 08:50:31 MarkDuplicates Tracking 625975 as yet unmatched pairs. 23878 records in RAM. INFO 2026-06-08 08:50:33 MarkDuplicates Read 402,000,000 records. Elapsed time: 00:12:23s. Time for last 1,000,000: 1s. Last read position: chr12:112,071,967 INFO 2026-06-08 08:50:33 MarkDuplicates Tracking 623410 as yet unmatched pairs. 21290 records in RAM. INFO 2026-06-08 08:50:34 MarkDuplicates Read 403,000,000 records. Elapsed time: 00:12:24s. Time for last 1,000,000: 1s. Last read position: chr12:113,176,850 INFO 2026-06-08 08:50:34 MarkDuplicates Tracking 620795 as yet unmatched pairs. 18662 records in RAM. INFO 2026-06-08 08:50:36 MarkDuplicates Read 404,000,000 records. Elapsed time: 00:12:26s. Time for last 1,000,000: 1s. Last read position: chr12:118,144,598 INFO 2026-06-08 08:50:36 MarkDuplicates Tracking 618283 as yet unmatched pairs. 16122 records in RAM. INFO 2026-06-08 08:50:38 MarkDuplicates Read 405,000,000 records. Elapsed time: 00:12:28s. Time for last 1,000,000: 1s. Last read position: chr12:120,438,388 INFO 2026-06-08 08:50:38 MarkDuplicates Tracking 618560 as yet unmatched pairs. 16368 records in RAM. INFO 2026-06-08 08:50:39 MarkDuplicates Read 406,000,000 records. Elapsed time: 00:12:29s. Time for last 1,000,000: 1s. Last read position: chr12:122,135,584 INFO 2026-06-08 08:50:39 MarkDuplicates Tracking 613129 as yet unmatched pairs. 10926 records in RAM. INFO 2026-06-08 08:50:41 MarkDuplicates Read 407,000,000 records. Elapsed time: 00:12:31s. Time for last 1,000,000: 1s. Last read position: chr12:123,586,902 INFO 2026-06-08 08:50:41 MarkDuplicates Tracking 614281 as yet unmatched pairs. 12059 records in RAM. INFO 2026-06-08 08:50:42 MarkDuplicates Read 408,000,000 records. Elapsed time: 00:12:32s. Time for last 1,000,000: 1s. Last read position: chr12:124,912,568 INFO 2026-06-08 08:50:42 MarkDuplicates Tracking 607791 as yet unmatched pairs. 5557 records in RAM. INFO 2026-06-08 08:50:44 MarkDuplicates Read 409,000,000 records. Elapsed time: 00:12:34s. Time for last 1,000,000: 1s. Last read position: chr12:132,642,331 INFO 2026-06-08 08:50:44 MarkDuplicates Tracking 604761 as yet unmatched pairs. 2522 records in RAM. INFO 2026-06-08 08:50:45 MarkDuplicates Read 410,000,000 records. Elapsed time: 00:12:35s. Time for last 1,000,000: 1s. Last read position: chr13:20,002,956 INFO 2026-06-08 08:50:45 MarkDuplicates Tracking 602599 as yet unmatched pairs. 20760 records in RAM. INFO 2026-06-08 08:50:47 MarkDuplicates Read 411,000,000 records. Elapsed time: 00:12:37s. Time for last 1,000,000: 1s. Last read position: chr13:27,435,524 INFO 2026-06-08 08:50:47 MarkDuplicates Tracking 599619 as yet unmatched pairs. 17774 records in RAM. INFO 2026-06-08 08:50:48 MarkDuplicates Read 412,000,000 records. Elapsed time: 00:12:38s. Time for last 1,000,000: 1s. Last read position: chr13:37,564,537 INFO 2026-06-08 08:50:48 MarkDuplicates Tracking 609570 as yet unmatched pairs. 27701 records in RAM. INFO 2026-06-08 08:50:50 MarkDuplicates Read 413,000,000 records. Elapsed time: 00:12:40s. Time for last 1,000,000: 1s. Last read position: chr13:38,362,662 INFO 2026-06-08 08:50:50 MarkDuplicates Tracking 594819 as yet unmatched pairs. 12943 records in RAM. INFO 2026-06-08 08:50:51 MarkDuplicates Read 414,000,000 records. Elapsed time: 00:12:41s. Time for last 1,000,000: 1s. Last read position: chr13:45,985,588 INFO 2026-06-08 08:50:51 MarkDuplicates Tracking 592549 as yet unmatched pairs. 10654 records in RAM. INFO 2026-06-08 08:50:53 MarkDuplicates Read 415,000,000 records. Elapsed time: 00:12:43s. Time for last 1,000,000: 1s. Last read position: chr13:75,530,171 INFO 2026-06-08 08:50:53 MarkDuplicates Tracking 590604 as yet unmatched pairs. 8702 records in RAM. INFO 2026-06-08 08:50:54 MarkDuplicates Read 416,000,000 records. Elapsed time: 00:12:44s. Time for last 1,000,000: 1s. Last read position: chr13:98,922,051 INFO 2026-06-08 08:50:54 MarkDuplicates Tracking 587599 as yet unmatched pairs. 5681 records in RAM. INFO 2026-06-08 08:50:56 MarkDuplicates Read 417,000,000 records. Elapsed time: 00:12:46s. Time for last 1,000,000: 1s. Last read position: chr13:110,482,546 INFO 2026-06-08 08:50:56 MarkDuplicates Tracking 585540 as yet unmatched pairs. 3601 records in RAM. INFO 2026-06-08 08:50:58 MarkDuplicates Read 418,000,000 records. Elapsed time: 00:12:48s. Time for last 1,000,000: 1s. Last read position: chr14:20,389,712 INFO 2026-06-08 08:50:58 MarkDuplicates Tracking 582051 as yet unmatched pairs. 49121 records in RAM. INFO 2026-06-08 08:50:59 MarkDuplicates Read 419,000,000 records. Elapsed time: 00:12:49s. Time for last 1,000,000: 1s. Last read position: chr14:22,812,956 INFO 2026-06-08 08:50:59 MarkDuplicates Tracking 579192 as yet unmatched pairs. 46245 records in RAM. INFO 2026-06-08 08:51:01 MarkDuplicates Read 420,000,000 records. Elapsed time: 00:12:50s. Time for last 1,000,000: 1s. Last read position: chr14:23,560,322 INFO 2026-06-08 08:51:01 MarkDuplicates Tracking 576721 as yet unmatched pairs. 43769 records in RAM. INFO 2026-06-08 08:51:02 MarkDuplicates Read 421,000,000 records. Elapsed time: 00:12:52s. Time for last 1,000,000: 1s. Last read position: chr14:24,431,656 INFO 2026-06-08 08:51:02 MarkDuplicates Tracking 573720 as yet unmatched pairs. 40767 records in RAM. INFO 2026-06-08 08:51:04 MarkDuplicates Read 422,000,000 records. Elapsed time: 00:12:54s. Time for last 1,000,000: 1s. Last read position: chr14:35,402,002 INFO 2026-06-08 08:51:04 MarkDuplicates Tracking 571916 as yet unmatched pairs. 38943 records in RAM. INFO 2026-06-08 08:51:05 MarkDuplicates Read 423,000,000 records. Elapsed time: 00:12:55s. Time for last 1,000,000: 1s. Last read position: chr14:49,583,582 INFO 2026-06-08 08:51:05 MarkDuplicates Tracking 572031 as yet unmatched pairs. 39039 records in RAM. INFO 2026-06-08 08:51:07 MarkDuplicates Read 424,000,000 records. Elapsed time: 00:12:56s. Time for last 1,000,000: 1s. Last read position: chr14:52,042,190 INFO 2026-06-08 08:51:07 MarkDuplicates Tracking 566496 as yet unmatched pairs. 33452 records in RAM. INFO 2026-06-08 08:51:08 MarkDuplicates Read 425,000,000 records. Elapsed time: 00:12:58s. Time for last 1,000,000: 1s. Last read position: chr14:58,257,989 INFO 2026-06-08 08:51:08 MarkDuplicates Tracking 563782 as yet unmatched pairs. 30712 records in RAM. INFO 2026-06-08 08:51:09 MarkDuplicates Read 426,000,000 records. Elapsed time: 00:12:59s. Time for last 1,000,000: 1s. Last read position: chr14:64,454,727 INFO 2026-06-08 08:51:09 MarkDuplicates Tracking 561118 as yet unmatched pairs. 28037 records in RAM. INFO 2026-06-08 08:51:11 MarkDuplicates Read 427,000,000 records. Elapsed time: 00:13:01s. Time for last 1,000,000: 1s. Last read position: chr14:68,909,362 INFO 2026-06-08 08:51:11 MarkDuplicates Tracking 560732 as yet unmatched pairs. 27636 records in RAM. INFO 2026-06-08 08:51:13 MarkDuplicates Read 428,000,000 records. Elapsed time: 00:13:03s. Time for last 1,000,000: 1s. Last read position: chr14:73,277,180 INFO 2026-06-08 08:51:13 MarkDuplicates Tracking 556068 as yet unmatched pairs. 22955 records in RAM. INFO 2026-06-08 08:51:14 MarkDuplicates Read 429,000,000 records. Elapsed time: 00:13:04s. Time for last 1,000,000: 1s. Last read position: chr14:75,003,048 INFO 2026-06-08 08:51:14 MarkDuplicates Tracking 552953 as yet unmatched pairs. 19832 records in RAM. INFO 2026-06-08 08:51:15 MarkDuplicates Read 430,000,000 records. Elapsed time: 00:13:05s. Time for last 1,000,000: 1s. Last read position: chr14:88,426,591 INFO 2026-06-08 08:51:15 MarkDuplicates Tracking 550251 as yet unmatched pairs. 17118 records in RAM. INFO 2026-06-08 08:51:17 MarkDuplicates Read 431,000,000 records. Elapsed time: 00:13:07s. Time for last 1,000,000: 1s. Last read position: chr14:93,242,318 INFO 2026-06-08 08:51:17 MarkDuplicates Tracking 547883 as yet unmatched pairs. 14742 records in RAM. INFO 2026-06-08 08:51:19 MarkDuplicates Read 432,000,000 records. Elapsed time: 00:13:09s. Time for last 1,000,000: 1s. Last read position: chr14:100,135,912 INFO 2026-06-08 08:51:19 MarkDuplicates Tracking 545893 as yet unmatched pairs. 12749 records in RAM. INFO 2026-06-08 08:51:20 MarkDuplicates Read 433,000,000 records. Elapsed time: 00:13:10s. Time for last 1,000,000: 1s. Last read position: chr14:102,083,179 INFO 2026-06-08 08:51:20 MarkDuplicates Tracking 543652 as yet unmatched pairs. 10489 records in RAM. INFO 2026-06-08 08:51:21 MarkDuplicates Read 434,000,000 records. Elapsed time: 00:13:11s. Time for last 1,000,000: 1s. Last read position: chr14:103,742,044 INFO 2026-06-08 08:51:21 MarkDuplicates Tracking 540282 as yet unmatched pairs. 7116 records in RAM. INFO 2026-06-08 08:51:23 MarkDuplicates Read 435,000,000 records. Elapsed time: 00:13:13s. Time for last 1,000,000: 1s. Last read position: chr14:104,945,071 INFO 2026-06-08 08:51:23 MarkDuplicates Tracking 538515 as yet unmatched pairs. 5336 records in RAM. INFO 2026-06-08 08:51:25 MarkDuplicates Read 436,000,000 records. Elapsed time: 00:13:15s. Time for last 1,000,000: 2s. Last read position: chr14:105,469,261 INFO 2026-06-08 08:51:25 MarkDuplicates Tracking 534081 as yet unmatched pairs. 898 records in RAM. INFO 2026-06-08 08:51:27 MarkDuplicates Read 437,000,000 records. Elapsed time: 00:13:17s. Time for last 1,000,000: 1s. Last read position: chr15:28,651,423 INFO 2026-06-08 08:51:27 MarkDuplicates Tracking 531704 as yet unmatched pairs. 38010 records in RAM. INFO 2026-06-08 08:51:28 MarkDuplicates Read 438,000,000 records. Elapsed time: 00:13:18s. Time for last 1,000,000: 1s. Last read position: chr15:34,528,731 INFO 2026-06-08 08:51:28 MarkDuplicates Tracking 529581 as yet unmatched pairs. 35865 records in RAM. INFO 2026-06-08 08:51:30 MarkDuplicates Read 439,000,000 records. Elapsed time: 00:13:20s. Time for last 1,000,000: 1s. Last read position: chr15:40,652,023 INFO 2026-06-08 08:51:30 MarkDuplicates Tracking 526927 as yet unmatched pairs. 33202 records in RAM. INFO 2026-06-08 08:51:31 MarkDuplicates Read 440,000,000 records. Elapsed time: 00:13:21s. Time for last 1,000,000: 1s. Last read position: chr15:42,444,884 INFO 2026-06-08 08:51:31 MarkDuplicates Tracking 524388 as yet unmatched pairs. 30650 records in RAM. INFO 2026-06-08 08:51:33 MarkDuplicates Read 441,000,000 records. Elapsed time: 00:13:23s. Time for last 1,000,000: 1s. Last read position: chr15:43,793,754 INFO 2026-06-08 08:51:33 MarkDuplicates Tracking 527717 as yet unmatched pairs. 33978 records in RAM. INFO 2026-06-08 08:51:35 MarkDuplicates Read 442,000,000 records. Elapsed time: 00:13:25s. Time for last 1,000,000: 2s. Last read position: chr15:48,510,072 INFO 2026-06-08 08:51:35 MarkDuplicates Tracking 519877 as yet unmatched pairs. 26128 records in RAM. INFO 2026-06-08 08:51:37 MarkDuplicates Read 443,000,000 records. Elapsed time: 00:13:27s. Time for last 1,000,000: 1s. Last read position: chr15:56,087,394 INFO 2026-06-08 08:51:37 MarkDuplicates Tracking 516736 as yet unmatched pairs. 22966 records in RAM. INFO 2026-06-08 08:51:38 MarkDuplicates Read 444,000,000 records. Elapsed time: 00:13:28s. Time for last 1,000,000: 1s. Last read position: chr15:60,511,312 INFO 2026-06-08 08:51:38 MarkDuplicates Tracking 514462 as yet unmatched pairs. 20679 records in RAM. INFO 2026-06-08 08:51:40 MarkDuplicates Read 445,000,000 records. Elapsed time: 00:13:30s. Time for last 1,000,000: 1s. Last read position: chr15:64,180,388 INFO 2026-06-08 08:51:40 MarkDuplicates Tracking 512022 as yet unmatched pairs. 18232 records in RAM. INFO 2026-06-08 08:51:41 MarkDuplicates Read 446,000,000 records. Elapsed time: 00:13:31s. Time for last 1,000,000: 1s. Last read position: chr15:68,369,266 INFO 2026-06-08 08:51:41 MarkDuplicates Tracking 509463 as yet unmatched pairs. 15658 records in RAM. INFO 2026-06-08 08:51:43 MarkDuplicates Read 447,000,000 records. Elapsed time: 00:13:33s. Time for last 1,000,000: 1s. Last read position: chr15:72,570,190 INFO 2026-06-08 08:51:43 MarkDuplicates Tracking 506918 as yet unmatched pairs. 13107 records in RAM. INFO 2026-06-08 08:51:44 MarkDuplicates Read 448,000,000 records. Elapsed time: 00:13:34s. Time for last 1,000,000: 1s. Last read position: chr15:75,208,720 INFO 2026-06-08 08:51:44 MarkDuplicates Tracking 503907 as yet unmatched pairs. 10087 records in RAM. INFO 2026-06-08 08:51:46 MarkDuplicates Read 449,000,000 records. Elapsed time: 00:13:36s. Time for last 1,000,000: 1s. Last read position: chr15:80,121,717 INFO 2026-06-08 08:51:46 MarkDuplicates Tracking 501850 as yet unmatched pairs. 8019 records in RAM. INFO 2026-06-08 08:51:47 MarkDuplicates Read 450,000,000 records. Elapsed time: 00:13:37s. Time for last 1,000,000: 1s. Last read position: chr15:87,074,034 INFO 2026-06-08 08:51:47 MarkDuplicates Tracking 498771 as yet unmatched pairs. 4928 records in RAM. INFO 2026-06-08 08:51:49 MarkDuplicates Read 451,000,000 records. Elapsed time: 00:13:39s. Time for last 1,000,000: 1s. Last read position: chr15:90,815,206 INFO 2026-06-08 08:51:49 MarkDuplicates Tracking 495939 as yet unmatched pairs. 2078 records in RAM. INFO 2026-06-08 08:51:51 MarkDuplicates Read 452,000,000 records. Elapsed time: 00:13:41s. Time for last 1,000,000: 1s. Last read position: chr16:234,815 INFO 2026-06-08 08:51:51 MarkDuplicates Tracking 493242 as yet unmatched pairs. 67917 records in RAM. INFO 2026-06-08 08:51:53 MarkDuplicates Read 453,000,000 records. Elapsed time: 00:13:42s. Time for last 1,000,000: 1s. Last read position: chr16:764,951 INFO 2026-06-08 08:51:53 MarkDuplicates Tracking 491218 as yet unmatched pairs. 65887 records in RAM. INFO 2026-06-08 08:51:54 MarkDuplicates Read 454,000,000 records. Elapsed time: 00:13:44s. Time for last 1,000,000: 1s. Last read position: chr16:1,770,906 INFO 2026-06-08 08:51:54 MarkDuplicates Tracking 487253 as yet unmatched pairs. 61916 records in RAM. INFO 2026-06-08 08:51:56 MarkDuplicates Read 455,000,000 records. Elapsed time: 00:13:46s. Time for last 1,000,000: 1s. Last read position: chr16:2,114,768 INFO 2026-06-08 08:51:56 MarkDuplicates Tracking 483395 as yet unmatched pairs. 58053 records in RAM. INFO 2026-06-08 08:51:57 MarkDuplicates Read 456,000,000 records. Elapsed time: 00:13:47s. Time for last 1,000,000: 1s. Last read position: chr16:2,762,519 INFO 2026-06-08 08:51:57 MarkDuplicates Tracking 481165 as yet unmatched pairs. 55814 records in RAM. INFO 2026-06-08 08:51:59 MarkDuplicates Read 457,000,000 records. Elapsed time: 00:13:49s. Time for last 1,000,000: 1s. Last read position: chr16:2,855,703 INFO 2026-06-08 08:51:59 MarkDuplicates Tracking 478219 as yet unmatched pairs. 52863 records in RAM. INFO 2026-06-08 08:52:00 MarkDuplicates Read 458,000,000 records. Elapsed time: 00:13:50s. Time for last 1,000,000: 1s. Last read position: chr16:4,335,169 INFO 2026-06-08 08:52:00 MarkDuplicates Tracking 475263 as yet unmatched pairs. 49895 records in RAM. INFO 2026-06-08 08:52:02 MarkDuplicates Read 459,000,000 records. Elapsed time: 00:13:52s. Time for last 1,000,000: 1s. Last read position: chr16:11,549,508 INFO 2026-06-08 08:52:02 MarkDuplicates Tracking 472724 as yet unmatched pairs. 47347 records in RAM. INFO 2026-06-08 08:52:04 MarkDuplicates Read 460,000,000 records. Elapsed time: 00:13:54s. Time for last 1,000,000: 1s. Last read position: chr16:14,875,245 INFO 2026-06-08 08:52:04 MarkDuplicates Tracking 470835 as yet unmatched pairs. 45445 records in RAM. INFO 2026-06-08 08:52:05 MarkDuplicates Read 461,000,000 records. Elapsed time: 00:13:55s. Time for last 1,000,000: 1s. Last read position: chr16:15,363,746 INFO 2026-06-08 08:52:05 MarkDuplicates Tracking 468956 as yet unmatched pairs. 43558 records in RAM. INFO 2026-06-08 08:52:06 MarkDuplicates Read 462,000,000 records. Elapsed time: 00:13:56s. Time for last 1,000,000: 1s. Last read position: chr16:16,350,090 INFO 2026-06-08 08:52:06 MarkDuplicates Tracking 469118 as yet unmatched pairs. 43720 records in RAM. INFO 2026-06-08 08:52:07 MarkDuplicates Read 463,000,000 records. Elapsed time: 00:13:57s. Time for last 1,000,000: 1s. Last read position: chr16:18,358,360 INFO 2026-06-08 08:52:07 MarkDuplicates Tracking 467763 as yet unmatched pairs. 42365 records in RAM. INFO 2026-06-08 08:52:09 MarkDuplicates Read 464,000,000 records. Elapsed time: 00:13:59s. Time for last 1,000,000: 1s. Last read position: chr16:18,868,337 INFO 2026-06-08 08:52:09 MarkDuplicates Tracking 465478 as yet unmatched pairs. 40077 records in RAM. INFO 2026-06-08 08:52:10 MarkDuplicates Read 465,000,000 records. Elapsed time: 00:14:00s. Time for last 1,000,000: 1s. Last read position: chr16:21,404,998 INFO 2026-06-08 08:52:10 MarkDuplicates Tracking 463596 as yet unmatched pairs. 38193 records in RAM. INFO 2026-06-08 08:52:11 MarkDuplicates Read 466,000,000 records. Elapsed time: 00:14:01s. Time for last 1,000,000: 1s. Last read position: chr16:21,837,158 INFO 2026-06-08 08:52:11 MarkDuplicates Tracking 462235 as yet unmatched pairs. 36825 records in RAM. INFO 2026-06-08 08:52:12 MarkDuplicates Read 467,000,000 records. Elapsed time: 00:14:02s. Time for last 1,000,000: 1s. Last read position: chr16:22,513,676 INFO 2026-06-08 08:52:12 MarkDuplicates Tracking 461488 as yet unmatched pairs. 36067 records in RAM. INFO 2026-06-08 08:52:14 MarkDuplicates Read 468,000,000 records. Elapsed time: 00:14:04s. Time for last 1,000,000: 1s. Last read position: chr16:22,540,813 INFO 2026-06-08 08:52:14 MarkDuplicates Tracking 460633 as yet unmatched pairs. 35210 records in RAM. INFO 2026-06-08 08:52:15 MarkDuplicates Read 469,000,000 records. Elapsed time: 00:14:05s. Time for last 1,000,000: 1s. Last read position: chr16:28,400,461 INFO 2026-06-08 08:52:15 MarkDuplicates Tracking 459238 as yet unmatched pairs. 33811 records in RAM. INFO 2026-06-08 08:52:16 MarkDuplicates Read 470,000,000 records. Elapsed time: 00:14:06s. Time for last 1,000,000: 1s. Last read position: chr16:29,382,296 INFO 2026-06-08 08:52:16 MarkDuplicates Tracking 456436 as yet unmatched pairs. 31002 records in RAM. INFO 2026-06-08 08:52:17 MarkDuplicates Read 471,000,000 records. Elapsed time: 00:14:07s. Time for last 1,000,000: 1s. Last read position: chr16:29,796,964 INFO 2026-06-08 08:52:17 MarkDuplicates Tracking 456063 as yet unmatched pairs. 30626 records in RAM. INFO 2026-06-08 08:52:19 MarkDuplicates Read 472,000,000 records. Elapsed time: 00:14:09s. Time for last 1,000,000: 1s. Last read position: chr16:30,092,680 INFO 2026-06-08 08:52:19 MarkDuplicates Tracking 452882 as yet unmatched pairs. 27444 records in RAM. INFO 2026-06-08 08:52:21 MarkDuplicates Read 473,000,000 records. Elapsed time: 00:14:11s. Time for last 1,000,000: 1s. Last read position: chr16:30,583,111 INFO 2026-06-08 08:52:21 MarkDuplicates Tracking 451531 as yet unmatched pairs. 26087 records in RAM. INFO 2026-06-08 08:52:22 MarkDuplicates Read 474,000,000 records. Elapsed time: 00:14:12s. Time for last 1,000,000: 1s. Last read position: chr16:31,180,166 INFO 2026-06-08 08:52:22 MarkDuplicates Tracking 452889 as yet unmatched pairs. 27432 records in RAM. INFO 2026-06-08 08:52:24 MarkDuplicates Read 475,000,000 records. Elapsed time: 00:14:14s. Time for last 1,000,000: 1s. Last read position: chr16:46,967,562 INFO 2026-06-08 08:52:24 MarkDuplicates Tracking 446264 as yet unmatched pairs. 20805 records in RAM. INFO 2026-06-08 08:52:25 MarkDuplicates Read 476,000,000 records. Elapsed time: 00:14:15s. Time for last 1,000,000: 1s. Last read position: chr16:55,491,807 INFO 2026-06-08 08:52:25 MarkDuplicates Tracking 443935 as yet unmatched pairs. 18464 records in RAM. INFO 2026-06-08 08:52:27 MarkDuplicates Read 477,000,000 records. Elapsed time: 00:14:17s. Time for last 1,000,000: 1s. Last read position: chr16:64,998,571 INFO 2026-06-08 08:52:27 MarkDuplicates Tracking 442669 as yet unmatched pairs. 17193 records in RAM. INFO 2026-06-08 08:52:28 MarkDuplicates Read 478,000,000 records. Elapsed time: 00:14:18s. Time for last 1,000,000: 1s. Last read position: chr16:68,275,030 INFO 2026-06-08 08:52:28 MarkDuplicates Tracking 438208 as yet unmatched pairs. 12721 records in RAM. INFO 2026-06-08 08:52:30 MarkDuplicates Read 479,000,000 records. Elapsed time: 00:14:20s. Time for last 1,000,000: 1s. Last read position: chr16:70,970,620 INFO 2026-06-08 08:52:30 MarkDuplicates Tracking 435191 as yet unmatched pairs. 9686 records in RAM. INFO 2026-06-08 08:52:31 MarkDuplicates Read 480,000,000 records. Elapsed time: 00:14:21s. Time for last 1,000,000: 1s. Last read position: chr16:82,148,745 INFO 2026-06-08 08:52:31 MarkDuplicates Tracking 432703 as yet unmatched pairs. 7181 records in RAM. INFO 2026-06-08 08:52:33 MarkDuplicates Read 481,000,000 records. Elapsed time: 00:14:23s. Time for last 1,000,000: 1s. Last read position: chr16:88,433,893 INFO 2026-06-08 08:52:33 MarkDuplicates Tracking 430040 as yet unmatched pairs. 4500 records in RAM. INFO 2026-06-08 08:52:34 MarkDuplicates Read 482,000,000 records. Elapsed time: 00:14:24s. Time for last 1,000,000: 1s. Last read position: chr16:89,561,725 INFO 2026-06-08 08:52:34 MarkDuplicates Tracking 429535 as yet unmatched pairs. 3986 records in RAM. INFO 2026-06-08 08:52:37 MarkDuplicates Read 483,000,000 records. Elapsed time: 00:14:27s. Time for last 1,000,000: 2s. Last read position: chr17:1,471,945 INFO 2026-06-08 08:52:37 MarkDuplicates Tracking 424686 as yet unmatched pairs. 177843 records in RAM. INFO 2026-06-08 08:52:39 MarkDuplicates Read 484,000,000 records. Elapsed time: 00:14:29s. Time for last 1,000,000: 1s. Last read position: chr17:3,885,391 INFO 2026-06-08 08:52:39 MarkDuplicates Tracking 421249 as yet unmatched pairs. 174405 records in RAM. INFO 2026-06-08 08:52:41 MarkDuplicates Read 485,000,000 records. Elapsed time: 00:14:31s. Time for last 1,000,000: 1s. Last read position: chr17:6,628,322 INFO 2026-06-08 08:52:41 MarkDuplicates Tracking 418531 as yet unmatched pairs. 171680 records in RAM. INFO 2026-06-08 08:52:43 MarkDuplicates Read 486,000,000 records. Elapsed time: 00:14:33s. Time for last 1,000,000: 1s. Last read position: chr17:7,513,962 INFO 2026-06-08 08:52:43 MarkDuplicates Tracking 416810 as yet unmatched pairs. 169955 records in RAM. INFO 2026-06-08 08:52:45 MarkDuplicates Read 487,000,000 records. Elapsed time: 00:14:35s. Time for last 1,000,000: 1s. Last read position: chr17:8,521,165 INFO 2026-06-08 08:52:45 MarkDuplicates Tracking 413683 as yet unmatched pairs. 166825 records in RAM. INFO 2026-06-08 08:52:46 MarkDuplicates Read 488,000,000 records. Elapsed time: 00:14:36s. Time for last 1,000,000: 1s. Last read position: chr17:17,175,301 INFO 2026-06-08 08:52:46 MarkDuplicates Tracking 410956 as yet unmatched pairs. 164093 records in RAM. INFO 2026-06-08 08:52:48 MarkDuplicates Read 489,000,000 records. Elapsed time: 00:14:38s. Time for last 1,000,000: 1s. Last read position: chr17:18,671,495 INFO 2026-06-08 08:52:48 MarkDuplicates Tracking 407885 as yet unmatched pairs. 161014 records in RAM. INFO 2026-06-08 08:52:49 MarkDuplicates Read 490,000,000 records. Elapsed time: 00:14:39s. Time for last 1,000,000: 1s. Last read position: chr17:27,752,858 INFO 2026-06-08 08:52:49 MarkDuplicates Tracking 405342 as yet unmatched pairs. 158466 records in RAM. INFO 2026-06-08 08:52:51 MarkDuplicates Read 491,000,000 records. Elapsed time: 00:14:41s. Time for last 1,000,000: 1s. Last read position: chr17:29,264,557 INFO 2026-06-08 08:52:51 MarkDuplicates Tracking 403285 as yet unmatched pairs. 156404 records in RAM. INFO 2026-06-08 08:52:52 MarkDuplicates Read 492,000,000 records. Elapsed time: 00:14:42s. Time for last 1,000,000: 1s. Last read position: chr17:31,940,310 INFO 2026-06-08 08:52:52 MarkDuplicates Tracking 401948 as yet unmatched pairs. 155066 records in RAM. INFO 2026-06-08 08:52:54 MarkDuplicates Read 493,000,000 records. Elapsed time: 00:14:44s. Time for last 1,000,000: 1s. Last read position: chr17:35,844,280 INFO 2026-06-08 08:52:54 MarkDuplicates Tracking 398115 as yet unmatched pairs. 151229 records in RAM. INFO 2026-06-08 08:52:55 MarkDuplicates Read 494,000,000 records. Elapsed time: 00:14:45s. Time for last 1,000,000: 1s. Last read position: chr17:38,138,560 INFO 2026-06-08 08:52:55 MarkDuplicates Tracking 396132 as yet unmatched pairs. 149238 records in RAM. INFO 2026-06-08 08:52:57 MarkDuplicates Read 495,000,000 records. Elapsed time: 00:14:47s. Time for last 1,000,000: 1s. Last read position: chr17:39,261,494 INFO 2026-06-08 08:52:57 MarkDuplicates Tracking 393631 as yet unmatched pairs. 146735 records in RAM. INFO 2026-06-08 08:52:58 MarkDuplicates Read 496,000,000 records. Elapsed time: 00:14:48s. Time for last 1,000,000: 1s. Last read position: chr17:39,716,388 INFO 2026-06-08 08:52:58 MarkDuplicates Tracking 397130 as yet unmatched pairs. 150228 records in RAM. INFO 2026-06-08 08:53:00 MarkDuplicates Read 497,000,000 records. Elapsed time: 00:14:50s. Time for last 1,000,000: 1s. Last read position: chr17:40,164,115 INFO 2026-06-08 08:53:00 MarkDuplicates Tracking 388190 as yet unmatched pairs. 141279 records in RAM. INFO 2026-06-08 08:53:01 MarkDuplicates Read 498,000,000 records. Elapsed time: 00:14:51s. Time for last 1,000,000: 1s. Last read position: chr17:41,524,854 INFO 2026-06-08 08:53:01 MarkDuplicates Tracking 392596 as yet unmatched pairs. 145679 records in RAM. INFO 2026-06-08 08:53:03 MarkDuplicates Read 499,000,000 records. Elapsed time: 00:14:53s. Time for last 1,000,000: 1s. Last read position: chr17:42,114,032 INFO 2026-06-08 08:53:03 MarkDuplicates Tracking 383614 as yet unmatched pairs. 136693 records in RAM. INFO 2026-06-08 08:53:04 MarkDuplicates Read 500,000,000 records. Elapsed time: 00:14:54s. Time for last 1,000,000: 1s. Last read position: chr17:42,782,799 INFO 2026-06-08 08:53:04 MarkDuplicates Tracking 379304 as yet unmatched pairs. 132378 records in RAM. INFO 2026-06-08 08:53:06 MarkDuplicates Read 501,000,000 records. Elapsed time: 00:14:56s. Time for last 1,000,000: 1s. Last read position: chr17:44,349,267 INFO 2026-06-08 08:53:06 MarkDuplicates Tracking 377503 as yet unmatched pairs. 130572 records in RAM. INFO 2026-06-08 08:55:16 MarkDuplicates Read 502,000,000 records. Elapsed time: 00:17:06s. Time for last 1,000,000: 130s. Last read position: chr17:46,082,270 INFO 2026-06-08 08:55:16 MarkDuplicates Tracking 373941 as yet unmatched pairs. 127007 records in RAM. INFO 2026-06-08 08:55:18 MarkDuplicates Read 503,000,000 records. Elapsed time: 00:17:08s. Time for last 1,000,000: 1s. Last read position: chr17:48,921,266 INFO 2026-06-08 08:55:18 MarkDuplicates Tracking 371961 as yet unmatched pairs. 125019 records in RAM. INFO 2026-06-08 08:55:19 MarkDuplicates Read 504,000,000 records. Elapsed time: 00:17:09s. Time for last 1,000,000: 1s. Last read position: chr17:50,149,509 INFO 2026-06-08 08:55:19 MarkDuplicates Tracking 369492 as yet unmatched pairs. 122543 records in RAM. INFO 2026-06-08 08:55:21 MarkDuplicates Read 505,000,000 records. Elapsed time: 00:17:11s. Time for last 1,000,000: 1s. Last read position: chr17:50,185,855 INFO 2026-06-08 08:55:21 MarkDuplicates Tracking 388604 as yet unmatched pairs. 141653 records in RAM. INFO 2026-06-08 08:55:23 MarkDuplicates Read 506,000,000 records. Elapsed time: 00:17:12s. Time for last 1,000,000: 1s. Last read position: chr17:50,186,488 INFO 2026-06-08 08:55:23 MarkDuplicates Tracking 377438 as yet unmatched pairs. 130486 records in RAM. INFO 2026-06-08 08:55:24 MarkDuplicates Read 507,000,000 records. Elapsed time: 00:17:14s. Time for last 1,000,000: 1s. Last read position: chr17:50,186,912 INFO 2026-06-08 08:55:24 MarkDuplicates Tracking 425700 as yet unmatched pairs. 178743 records in RAM. INFO 2026-06-08 08:55:26 MarkDuplicates Read 508,000,000 records. Elapsed time: 00:17:16s. Time for last 1,000,000: 1s. Last read position: chr17:50,187,483 INFO 2026-06-08 08:55:26 MarkDuplicates Tracking 450711 as yet unmatched pairs. 203754 records in RAM. INFO 2026-06-08 08:55:28 MarkDuplicates Read 509,000,000 records. Elapsed time: 00:17:18s. Time for last 1,000,000: 1s. Last read position: chr17:50,187,951 INFO 2026-06-08 08:55:28 MarkDuplicates Tracking 441050 as yet unmatched pairs. 194089 records in RAM. INFO 2026-06-08 08:55:30 MarkDuplicates Read 510,000,000 records. Elapsed time: 00:17:20s. Time for last 1,000,000: 2s. Last read position: chr17:50,188,568 INFO 2026-06-08 08:55:30 MarkDuplicates Tracking 419474 as yet unmatched pairs. 172513 records in RAM. INFO 2026-06-08 08:55:32 MarkDuplicates Read 511,000,000 records. Elapsed time: 00:17:22s. Time for last 1,000,000: 2s. Last read position: chr17:50,188,928 INFO 2026-06-08 08:55:32 MarkDuplicates Tracking 434637 as yet unmatched pairs. 187674 records in RAM. INFO 2026-06-08 08:55:34 MarkDuplicates Read 512,000,000 records. Elapsed time: 00:17:24s. Time for last 1,000,000: 2s. Last read position: chr17:50,189,384 INFO 2026-06-08 08:55:34 MarkDuplicates Tracking 390423 as yet unmatched pairs. 143457 records in RAM. INFO 2026-06-08 08:55:36 MarkDuplicates Read 513,000,000 records. Elapsed time: 00:17:26s. Time for last 1,000,000: 1s. Last read position: chr17:50,189,518 INFO 2026-06-08 08:55:36 MarkDuplicates Tracking 456426 as yet unmatched pairs. 209455 records in RAM. INFO 2026-06-08 08:55:38 MarkDuplicates Read 514,000,000 records. Elapsed time: 00:17:28s. Time for last 1,000,000: 1s. Last read position: chr17:50,189,900 INFO 2026-06-08 08:55:38 MarkDuplicates Tracking 425063 as yet unmatched pairs. 178088 records in RAM. INFO 2026-06-08 08:55:39 MarkDuplicates Read 515,000,000 records. Elapsed time: 00:17:29s. Time for last 1,000,000: 1s. Last read position: chr17:50,190,327 INFO 2026-06-08 08:55:39 MarkDuplicates Tracking 478905 as yet unmatched pairs. 231930 records in RAM. INFO 2026-06-08 08:55:41 MarkDuplicates Read 516,000,000 records. Elapsed time: 00:17:31s. Time for last 1,000,000: 2s. Last read position: chr17:50,190,886 INFO 2026-06-08 08:55:41 MarkDuplicates Tracking 408834 as yet unmatched pairs. 161845 records in RAM. INFO 2026-06-08 08:55:43 MarkDuplicates Read 517,000,000 records. Elapsed time: 00:17:33s. Time for last 1,000,000: 1s. Last read position: chr17:50,191,856 INFO 2026-06-08 08:55:43 MarkDuplicates Tracking 395560 as yet unmatched pairs. 148570 records in RAM. INFO 2026-06-08 08:55:44 MarkDuplicates Read 518,000,000 records. Elapsed time: 00:17:34s. Time for last 1,000,000: 1s. Last read position: chr17:50,192,676 INFO 2026-06-08 08:55:44 MarkDuplicates Tracking 417803 as yet unmatched pairs. 170807 records in RAM. INFO 2026-06-08 08:55:46 MarkDuplicates Read 519,000,000 records. Elapsed time: 00:17:36s. Time for last 1,000,000: 1s. Last read position: chr17:50,193,940 INFO 2026-06-08 08:55:46 MarkDuplicates Tracking 414783 as yet unmatched pairs. 167777 records in RAM. INFO 2026-06-08 08:55:48 MarkDuplicates Read 520,000,000 records. Elapsed time: 00:17:38s. Time for last 1,000,000: 1s. Last read position: chr17:50,194,129 INFO 2026-06-08 08:55:48 MarkDuplicates Tracking 453548 as yet unmatched pairs. 206534 records in RAM. INFO 2026-06-08 08:55:49 MarkDuplicates Read 521,000,000 records. Elapsed time: 00:17:39s. Time for last 1,000,000: 1s. Last read position: chr17:50,194,390 INFO 2026-06-08 08:55:49 MarkDuplicates Tracking 441843 as yet unmatched pairs. 194825 records in RAM. INFO 2026-06-08 08:55:51 MarkDuplicates Read 522,000,000 records. Elapsed time: 00:17:41s. Time for last 1,000,000: 1s. Last read position: chr17:50,194,742 INFO 2026-06-08 08:55:51 MarkDuplicates Tracking 417887 as yet unmatched pairs. 170869 records in RAM. INFO 2026-06-08 08:55:53 MarkDuplicates Read 523,000,000 records. Elapsed time: 00:17:43s. Time for last 1,000,000: 1s. Last read position: chr17:50,195,249 INFO 2026-06-08 08:55:53 MarkDuplicates Tracking 412473 as yet unmatched pairs. 165442 records in RAM. INFO 2026-06-08 08:55:54 MarkDuplicates Read 524,000,000 records. Elapsed time: 00:17:44s. Time for last 1,000,000: 1s. Last read position: chr17:50,195,595 INFO 2026-06-08 08:55:54 MarkDuplicates Tracking 417140 as yet unmatched pairs. 170107 records in RAM. INFO 2026-06-08 08:55:56 MarkDuplicates Read 525,000,000 records. Elapsed time: 00:17:46s. Time for last 1,000,000: 1s. Last read position: chr17:50,196,177 INFO 2026-06-08 08:55:56 MarkDuplicates Tracking 365187 as yet unmatched pairs. 118154 records in RAM. INFO 2026-06-08 08:55:58 MarkDuplicates Read 526,000,000 records. Elapsed time: 00:17:48s. Time for last 1,000,000: 1s. Last read position: chr17:50,196,326 INFO 2026-06-08 08:55:58 MarkDuplicates Tracking 472854 as yet unmatched pairs. 225818 records in RAM. INFO 2026-06-08 08:56:00 MarkDuplicates Read 527,000,000 records. Elapsed time: 00:17:50s. Time for last 1,000,000: 2s. Last read position: chr17:50,196,647 INFO 2026-06-08 08:56:00 MarkDuplicates Tracking 436717 as yet unmatched pairs. 189673 records in RAM. INFO 2026-06-08 08:56:02 MarkDuplicates Read 528,000,000 records. Elapsed time: 00:17:52s. Time for last 1,000,000: 2s. Last read position: chr17:50,197,230 INFO 2026-06-08 08:56:02 MarkDuplicates Tracking 398102 as yet unmatched pairs. 151057 records in RAM. INFO 2026-06-08 08:56:05 MarkDuplicates Read 529,000,000 records. Elapsed time: 00:17:55s. Time for last 1,000,000: 2s. Last read position: chr17:50,198,176 INFO 2026-06-08 08:56:05 MarkDuplicates Tracking 340312 as yet unmatched pairs. 93267 records in RAM. INFO 2026-06-08 08:56:07 MarkDuplicates Read 530,000,000 records. Elapsed time: 00:17:57s. Time for last 1,000,000: 1s. Last read position: chr17:50,199,269 INFO 2026-06-08 08:56:07 MarkDuplicates Tracking 355115 as yet unmatched pairs. 108065 records in RAM. INFO 2026-06-08 08:56:08 MarkDuplicates Read 531,000,000 records. Elapsed time: 00:17:58s. Time for last 1,000,000: 1s. Last read position: chr17:50,199,753 INFO 2026-06-08 08:56:08 MarkDuplicates Tracking 334445 as yet unmatched pairs. 87395 records in RAM. INFO 2026-06-08 08:56:10 MarkDuplicates Read 532,000,000 records. Elapsed time: 00:18:00s. Time for last 1,000,000: 1s. Last read position: chr17:50,201,437 INFO 2026-06-08 08:56:10 MarkDuplicates Tracking 311904 as yet unmatched pairs. 64840 records in RAM. INFO 2026-06-08 08:56:11 MarkDuplicates Read 533,000,000 records. Elapsed time: 00:18:01s. Time for last 1,000,000: 1s. Last read position: chr17:50,750,828 INFO 2026-06-08 08:56:11 MarkDuplicates Tracking 284320 as yet unmatched pairs. 37233 records in RAM. INFO 2026-06-08 08:56:13 MarkDuplicates Read 534,000,000 records. Elapsed time: 00:18:03s. Time for last 1,000,000: 1s. Last read position: chr17:57,105,545 INFO 2026-06-08 08:56:13 MarkDuplicates Tracking 282178 as yet unmatched pairs. 35091 records in RAM. INFO 2026-06-08 08:56:14 MarkDuplicates Read 535,000,000 records. Elapsed time: 00:18:04s. Time for last 1,000,000: 1s. Last read position: chr17:59,620,127 INFO 2026-06-08 08:56:14 MarkDuplicates Tracking 282393 as yet unmatched pairs. 35302 records in RAM. INFO 2026-06-08 08:56:16 MarkDuplicates Read 536,000,000 records. Elapsed time: 00:18:06s. Time for last 1,000,000: 1s. Last read position: chr17:59,681,370 INFO 2026-06-08 08:56:16 MarkDuplicates Tracking 280999 as yet unmatched pairs. 33907 records in RAM. INFO 2026-06-08 08:56:17 MarkDuplicates Read 537,000,000 records. Elapsed time: 00:18:07s. Time for last 1,000,000: 1s. Last read position: chr17:60,910,656 INFO 2026-06-08 08:56:17 MarkDuplicates Tracking 272951 as yet unmatched pairs. 25847 records in RAM. INFO 2026-06-08 08:56:19 MarkDuplicates Read 538,000,000 records. Elapsed time: 00:18:09s. Time for last 1,000,000: 1s. Last read position: chr17:63,792,551 INFO 2026-06-08 08:56:19 MarkDuplicates Tracking 270658 as yet unmatched pairs. 23552 records in RAM. INFO 2026-06-08 08:56:20 MarkDuplicates Read 539,000,000 records. Elapsed time: 00:18:10s. Time for last 1,000,000: 1s. Last read position: chr17:64,504,278 INFO 2026-06-08 08:56:20 MarkDuplicates Tracking 269277 as yet unmatched pairs. 22165 records in RAM. INFO 2026-06-08 08:56:22 MarkDuplicates Read 540,000,000 records. Elapsed time: 00:18:11s. Time for last 1,000,000: 1s. Last read position: chr17:67,874,848 INFO 2026-06-08 08:56:22 MarkDuplicates Tracking 265056 as yet unmatched pairs. 17941 records in RAM. INFO 2026-06-08 08:56:23 MarkDuplicates Read 541,000,000 records. Elapsed time: 00:18:13s. Time for last 1,000,000: 1s. Last read position: chr17:75,213,119 INFO 2026-06-08 08:56:23 MarkDuplicates Tracking 262583 as yet unmatched pairs. 15464 records in RAM. INFO 2026-06-08 08:56:25 MarkDuplicates Read 542,000,000 records. Elapsed time: 00:18:15s. Time for last 1,000,000: 1s. Last read position: chr17:76,710,636 INFO 2026-06-08 08:56:25 MarkDuplicates Tracking 259307 as yet unmatched pairs. 12178 records in RAM. INFO 2026-06-08 08:56:27 MarkDuplicates Read 543,000,000 records. Elapsed time: 00:18:17s. Time for last 1,000,000: 2s. Last read position: chr17:80,110,735 INFO 2026-06-08 08:56:27 MarkDuplicates Tracking 257165 as yet unmatched pairs. 10033 records in RAM. INFO 2026-06-08 08:56:30 MarkDuplicates Read 544,000,000 records. Elapsed time: 00:18:20s. Time for last 1,000,000: 2s. Last read position: chr17:81,512,242 INFO 2026-06-08 08:56:30 MarkDuplicates Tracking 255365 as yet unmatched pairs. 8223 records in RAM. INFO 2026-06-08 08:56:31 MarkDuplicates Read 545,000,000 records. Elapsed time: 00:18:21s. Time for last 1,000,000: 1s. Last read position: chr17:82,081,667 INFO 2026-06-08 08:56:31 MarkDuplicates Tracking 252676 as yet unmatched pairs. 5524 records in RAM. INFO 2026-06-08 08:56:33 MarkDuplicates Read 546,000,000 records. Elapsed time: 00:18:23s. Time for last 1,000,000: 1s. Last read position: chr17:82,757,789 INFO 2026-06-08 08:56:33 MarkDuplicates Tracking 247933 as yet unmatched pairs. 771 records in RAM. INFO 2026-06-08 08:56:34 MarkDuplicates Read 547,000,000 records. Elapsed time: 00:18:24s. Time for last 1,000,000: 1s. Last read position: chr18:9,254,897 INFO 2026-06-08 08:56:34 MarkDuplicates Tracking 245203 as yet unmatched pairs. 13376 records in RAM. INFO 2026-06-08 08:56:36 MarkDuplicates Read 548,000,000 records. Elapsed time: 00:18:26s. Time for last 1,000,000: 1s. Last read position: chr18:21,574,250 INFO 2026-06-08 08:56:36 MarkDuplicates Tracking 242748 as yet unmatched pairs. 10912 records in RAM. INFO 2026-06-08 08:56:37 MarkDuplicates Read 549,000,000 records. Elapsed time: 00:18:27s. Time for last 1,000,000: 1s. Last read position: chr18:32,412,759 INFO 2026-06-08 08:56:37 MarkDuplicates Tracking 240061 as yet unmatched pairs. 8222 records in RAM. INFO 2026-06-08 08:56:38 MarkDuplicates Read 550,000,000 records. Elapsed time: 00:18:28s. Time for last 1,000,000: 1s. Last read position: chr18:49,490,477 INFO 2026-06-08 08:56:38 MarkDuplicates Tracking 239121 as yet unmatched pairs. 7282 records in RAM. INFO 2026-06-08 08:56:40 MarkDuplicates Read 551,000,000 records. Elapsed time: 00:18:30s. Time for last 1,000,000: 1s. Last read position: chr18:59,345,951 INFO 2026-06-08 08:56:40 MarkDuplicates Tracking 235955 as yet unmatched pairs. 4106 records in RAM. INFO 2026-06-08 08:56:41 MarkDuplicates Read 552,000,000 records. Elapsed time: 00:18:31s. Time for last 1,000,000: 1s. Last read position: chr18:79,717,905 INFO 2026-06-08 08:56:41 MarkDuplicates Tracking 232326 as yet unmatched pairs. 471 records in RAM. INFO 2026-06-08 08:56:44 MarkDuplicates Read 553,000,000 records. Elapsed time: 00:18:34s. Time for last 1,000,000: 2s. Last read position: chr19:1,116,034 INFO 2026-06-08 08:56:44 MarkDuplicates Tracking 229246 as yet unmatched pairs. 91160 records in RAM. INFO 2026-06-08 08:56:45 MarkDuplicates Read 554,000,000 records. Elapsed time: 00:18:35s. Time for last 1,000,000: 1s. Last read position: chr19:2,211,152 INFO 2026-06-08 08:56:45 MarkDuplicates Tracking 225917 as yet unmatched pairs. 87831 records in RAM. INFO 2026-06-08 08:56:47 MarkDuplicates Read 555,000,000 records. Elapsed time: 00:18:37s. Time for last 1,000,000: 1s. Last read position: chr19:4,362,329 INFO 2026-06-08 08:56:47 MarkDuplicates Tracking 222735 as yet unmatched pairs. 84648 records in RAM. INFO 2026-06-08 08:56:48 MarkDuplicates Read 556,000,000 records. Elapsed time: 00:18:38s. Time for last 1,000,000: 1s. Last read position: chr19:6,383,387 INFO 2026-06-08 08:56:48 MarkDuplicates Tracking 219667 as yet unmatched pairs. 81579 records in RAM. INFO 2026-06-08 08:56:50 MarkDuplicates Read 557,000,000 records. Elapsed time: 00:18:40s. Time for last 1,000,000: 1s. Last read position: chr19:7,870,713 INFO 2026-06-08 08:56:50 MarkDuplicates Tracking 216940 as yet unmatched pairs. 78852 records in RAM. INFO 2026-06-08 08:56:51 MarkDuplicates Read 558,000,000 records. Elapsed time: 00:18:41s. Time for last 1,000,000: 1s. Last read position: chr19:9,973,607 INFO 2026-06-08 08:56:51 MarkDuplicates Tracking 214071 as yet unmatched pairs. 75983 records in RAM. INFO 2026-06-08 08:56:52 MarkDuplicates Read 559,000,000 records. Elapsed time: 00:18:42s. Time for last 1,000,000: 1s. Last read position: chr19:10,637,905 INFO 2026-06-08 08:56:52 MarkDuplicates Tracking 213099 as yet unmatched pairs. 75002 records in RAM. INFO 2026-06-08 08:56:54 MarkDuplicates Read 560,000,000 records. Elapsed time: 00:18:44s. Time for last 1,000,000: 1s. Last read position: chr19:11,194,483 INFO 2026-06-08 08:56:54 MarkDuplicates Tracking 208684 as yet unmatched pairs. 70581 records in RAM. INFO 2026-06-08 08:56:56 MarkDuplicates Read 561,000,000 records. Elapsed time: 00:18:46s. Time for last 1,000,000: 1s. Last read position: chr19:12,745,418 INFO 2026-06-08 08:56:56 MarkDuplicates Tracking 205673 as yet unmatched pairs. 67569 records in RAM. INFO 2026-06-08 08:56:58 MarkDuplicates Read 562,000,000 records. Elapsed time: 00:18:48s. Time for last 1,000,000: 2s. Last read position: chr19:14,097,781 INFO 2026-06-08 08:56:58 MarkDuplicates Tracking 203446 as yet unmatched pairs. 65342 records in RAM. INFO 2026-06-08 08:57:00 MarkDuplicates Read 563,000,000 records. Elapsed time: 00:18:50s. Time for last 1,000,000: 1s. Last read position: chr19:15,186,927 INFO 2026-06-08 08:57:00 MarkDuplicates Tracking 200322 as yet unmatched pairs. 62217 records in RAM. INFO 2026-06-08 08:57:02 MarkDuplicates Read 564,000,000 records. Elapsed time: 00:18:52s. Time for last 1,000,000: 1s. Last read position: chr19:15,403,550 INFO 2026-06-08 08:57:02 MarkDuplicates Tracking 197895 as yet unmatched pairs. 59789 records in RAM. INFO 2026-06-08 08:57:03 MarkDuplicates Read 565,000,000 records. Elapsed time: 00:18:53s. Time for last 1,000,000: 1s. Last read position: chr19:17,235,539 INFO 2026-06-08 08:57:03 MarkDuplicates Tracking 194087 as yet unmatched pairs. 55978 records in RAM. INFO 2026-06-08 08:57:05 MarkDuplicates Read 566,000,000 records. Elapsed time: 00:18:55s. Time for last 1,000,000: 1s. Last read position: chr19:18,177,950 INFO 2026-06-08 08:57:05 MarkDuplicates Tracking 190824 as yet unmatched pairs. 52711 records in RAM. INFO 2026-06-08 08:57:06 MarkDuplicates Read 567,000,000 records. Elapsed time: 00:18:56s. Time for last 1,000,000: 1s. Last read position: chr19:19,009,875 INFO 2026-06-08 08:57:06 MarkDuplicates Tracking 188590 as yet unmatched pairs. 50473 records in RAM. INFO 2026-06-08 08:57:07 MarkDuplicates Read 568,000,000 records. Elapsed time: 00:18:57s. Time for last 1,000,000: 1s. Last read position: chr19:31,278,616 INFO 2026-06-08 08:57:07 MarkDuplicates Tracking 185409 as yet unmatched pairs. 47288 records in RAM. INFO 2026-06-08 08:57:09 MarkDuplicates Read 569,000,000 records. Elapsed time: 00:18:59s. Time for last 1,000,000: 1s. Last read position: chr19:35,262,570 INFO 2026-06-08 08:57:09 MarkDuplicates Tracking 183411 as yet unmatched pairs. 45283 records in RAM. INFO 2026-06-08 08:57:11 MarkDuplicates Read 570,000,000 records. Elapsed time: 00:19:00s. Time for last 1,000,000: 1s. Last read position: chr19:36,973,726 INFO 2026-06-08 08:57:11 MarkDuplicates Tracking 179528 as yet unmatched pairs. 41399 records in RAM. INFO 2026-06-08 08:57:12 MarkDuplicates Read 571,000,000 records. Elapsed time: 00:19:02s. Time for last 1,000,000: 1s. Last read position: chr19:38,905,500 INFO 2026-06-08 08:57:12 MarkDuplicates Tracking 176967 as yet unmatched pairs. 38832 records in RAM. INFO 2026-06-08 08:57:13 MarkDuplicates Read 572,000,000 records. Elapsed time: 00:19:03s. Time for last 1,000,000: 1s. Last read position: chr19:39,972,400 INFO 2026-06-08 08:57:13 MarkDuplicates Tracking 174816 as yet unmatched pairs. 36674 records in RAM. INFO 2026-06-08 08:57:15 MarkDuplicates Read 573,000,000 records. Elapsed time: 00:19:05s. Time for last 1,000,000: 1s. Last read position: chr19:41,276,175 INFO 2026-06-08 08:57:15 MarkDuplicates Tracking 171998 as yet unmatched pairs. 33856 records in RAM. INFO 2026-06-08 08:57:16 MarkDuplicates Read 574,000,000 records. Elapsed time: 00:19:06s. Time for last 1,000,000: 1s. Last read position: chr19:42,289,045 INFO 2026-06-08 08:57:16 MarkDuplicates Tracking 169267 as yet unmatched pairs. 31125 records in RAM. INFO 2026-06-08 08:57:18 MarkDuplicates Read 575,000,000 records. Elapsed time: 00:19:08s. Time for last 1,000,000: 1s. Last read position: chr19:44,820,918 INFO 2026-06-08 08:57:18 MarkDuplicates Tracking 166108 as yet unmatched pairs. 27960 records in RAM. INFO 2026-06-08 08:57:19 MarkDuplicates Read 576,000,000 records. Elapsed time: 00:19:09s. Time for last 1,000,000: 1s. Last read position: chr19:45,777,447 INFO 2026-06-08 08:57:19 MarkDuplicates Tracking 163121 as yet unmatched pairs. 24971 records in RAM. INFO 2026-06-08 08:57:21 MarkDuplicates Read 577,000,000 records. Elapsed time: 00:19:10s. Time for last 1,000,000: 1s. Last read position: chr19:47,679,964 INFO 2026-06-08 08:57:21 MarkDuplicates Tracking 159732 as yet unmatched pairs. 21577 records in RAM. INFO 2026-06-08 08:57:22 MarkDuplicates Read 578,000,000 records. Elapsed time: 00:19:12s. Time for last 1,000,000: 1s. Last read position: chr19:48,969,511 INFO 2026-06-08 08:57:22 MarkDuplicates Tracking 156800 as yet unmatched pairs. 18645 records in RAM. INFO 2026-06-08 08:57:24 MarkDuplicates Read 579,000,000 records. Elapsed time: 00:19:14s. Time for last 1,000,000: 1s. Last read position: chr19:49,635,523 INFO 2026-06-08 08:57:24 MarkDuplicates Tracking 153846 as yet unmatched pairs. 15687 records in RAM. INFO 2026-06-08 08:57:26 MarkDuplicates Read 580,000,000 records. Elapsed time: 00:19:16s. Time for last 1,000,000: 2s. Last read position: chr19:50,725,399 INFO 2026-06-08 08:57:26 MarkDuplicates Tracking 150916 as yet unmatched pairs. 12755 records in RAM. INFO 2026-06-08 08:57:28 MarkDuplicates Read 581,000,000 records. Elapsed time: 00:19:18s. Time for last 1,000,000: 1s. Last read position: chr19:53,402,082 INFO 2026-06-08 08:57:28 MarkDuplicates Tracking 148690 as yet unmatched pairs. 10527 records in RAM. INFO 2026-06-08 08:57:29 MarkDuplicates Read 582,000,000 records. Elapsed time: 00:19:19s. Time for last 1,000,000: 1s. Last read position: chr19:54,667,910 INFO 2026-06-08 08:57:29 MarkDuplicates Tracking 146163 as yet unmatched pairs. 7998 records in RAM. INFO 2026-06-08 08:57:31 MarkDuplicates Read 583,000,000 records. Elapsed time: 00:19:20s. Time for last 1,000,000: 1s. Last read position: chr19:56,087,958 INFO 2026-06-08 08:57:31 MarkDuplicates Tracking 142740 as yet unmatched pairs. 4573 records in RAM. INFO 2026-06-08 08:57:32 MarkDuplicates Read 584,000,000 records. Elapsed time: 00:19:22s. Time for last 1,000,000: 1s. Last read position: chr19:58,084,772 INFO 2026-06-08 08:57:32 MarkDuplicates Tracking 140432 as yet unmatched pairs. 2264 records in RAM. INFO 2026-06-08 08:57:34 MarkDuplicates Read 585,000,000 records. Elapsed time: 00:19:24s. Time for last 1,000,000: 1s. Last read position: chr20:1,369,890 INFO 2026-06-08 08:57:34 MarkDuplicates Tracking 137957 as yet unmatched pairs. 34028 records in RAM. INFO 2026-06-08 08:57:35 MarkDuplicates Read 586,000,000 records. Elapsed time: 00:19:25s. Time for last 1,000,000: 1s. Last read position: chr20:3,865,313 INFO 2026-06-08 08:57:35 MarkDuplicates Tracking 134430 as yet unmatched pairs. 30500 records in RAM. INFO 2026-06-08 08:57:37 MarkDuplicates Read 587,000,000 records. Elapsed time: 00:19:27s. Time for last 1,000,000: 1s. Last read position: chr20:18,316,133 INFO 2026-06-08 08:57:37 MarkDuplicates Tracking 131955 as yet unmatched pairs. 28024 records in RAM. INFO 2026-06-08 08:57:38 MarkDuplicates Read 588,000,000 records. Elapsed time: 00:19:28s. Time for last 1,000,000: 1s. Last read position: chr20:31,798,448 INFO 2026-06-08 08:57:38 MarkDuplicates Tracking 129135 as yet unmatched pairs. 25203 records in RAM. INFO 2026-06-08 08:57:40 MarkDuplicates Read 589,000,000 records. Elapsed time: 00:19:30s. Time for last 1,000,000: 1s. Last read position: chr20:35,003,501 INFO 2026-06-08 08:57:40 MarkDuplicates Tracking 126712 as yet unmatched pairs. 22777 records in RAM. INFO 2026-06-08 08:57:41 MarkDuplicates Read 590,000,000 records. Elapsed time: 00:19:31s. Time for last 1,000,000: 1s. Last read position: chr20:36,912,437 INFO 2026-06-08 08:57:41 MarkDuplicates Tracking 123966 as yet unmatched pairs. 20025 records in RAM. INFO 2026-06-08 08:57:42 MarkDuplicates Read 591,000,000 records. Elapsed time: 00:19:32s. Time for last 1,000,000: 1s. Last read position: chr20:43,458,030 INFO 2026-06-08 08:57:42 MarkDuplicates Tracking 121057 as yet unmatched pairs. 17108 records in RAM. INFO 2026-06-08 08:57:44 MarkDuplicates Read 592,000,000 records. Elapsed time: 00:19:34s. Time for last 1,000,000: 1s. Last read position: chr20:46,355,769 INFO 2026-06-08 08:57:44 MarkDuplicates Tracking 118276 as yet unmatched pairs. 14325 records in RAM. INFO 2026-06-08 08:57:46 MarkDuplicates Read 593,000,000 records. Elapsed time: 00:19:36s. Time for last 1,000,000: 1s. Last read position: chr20:49,248,615 INFO 2026-06-08 08:57:46 MarkDuplicates Tracking 115877 as yet unmatched pairs. 11911 records in RAM. INFO 2026-06-08 08:57:47 MarkDuplicates Read 594,000,000 records. Elapsed time: 00:19:37s. Time for last 1,000,000: 1s. Last read position: chr20:58,668,051 INFO 2026-06-08 08:57:47 MarkDuplicates Tracking 113039 as yet unmatched pairs. 9073 records in RAM. INFO 2026-06-08 08:57:48 MarkDuplicates Read 595,000,000 records. Elapsed time: 00:19:38s. Time for last 1,000,000: 1s. Last read position: chr20:62,315,146 INFO 2026-06-08 08:57:48 MarkDuplicates Tracking 110162 as yet unmatched pairs. 6196 records in RAM. INFO 2026-06-08 08:57:50 MarkDuplicates Read 596,000,000 records. Elapsed time: 00:19:40s. Time for last 1,000,000: 1s. Last read position: chr20:63,213,892 INFO 2026-06-08 08:57:50 MarkDuplicates Tracking 106824 as yet unmatched pairs. 2858 records in RAM. INFO 2026-06-08 08:57:51 MarkDuplicates Read 597,000,000 records. Elapsed time: 00:19:41s. Time for last 1,000,000: 1s. Last read position: chr21:6,487,386 INFO 2026-06-08 08:57:51 MarkDuplicates Tracking 104166 as yet unmatched pairs. 21126 records in RAM. INFO 2026-06-08 08:57:53 MarkDuplicates Read 598,000,000 records. Elapsed time: 00:19:43s. Time for last 1,000,000: 1s. Last read position: chr21:8,441,983 INFO 2026-06-08 08:57:53 MarkDuplicates Tracking 102696 as yet unmatched pairs. 19651 records in RAM. INFO 2026-06-08 08:57:55 MarkDuplicates Read 599,000,000 records. Elapsed time: 00:19:45s. Time for last 1,000,000: 2s. Last read position: chr21:31,666,466 INFO 2026-06-08 08:57:55 MarkDuplicates Tracking 101065 as yet unmatched pairs. 18018 records in RAM. INFO 2026-06-08 08:57:56 MarkDuplicates Read 600,000,000 records. Elapsed time: 00:19:46s. Time for last 1,000,000: 1s. Last read position: chr21:34,669,569 INFO 2026-06-08 08:57:56 MarkDuplicates Tracking 97792 as yet unmatched pairs. 14726 records in RAM. INFO 2026-06-08 08:57:58 MarkDuplicates Read 601,000,000 records. Elapsed time: 00:19:47s. Time for last 1,000,000: 1s. Last read position: chr21:37,225,492 INFO 2026-06-08 08:57:58 MarkDuplicates Tracking 94670 as yet unmatched pairs. 11600 records in RAM. INFO 2026-06-08 08:57:59 MarkDuplicates Read 602,000,000 records. Elapsed time: 00:19:49s. Time for last 1,000,000: 1s. Last read position: chr21:43,743,733 INFO 2026-06-08 08:57:59 MarkDuplicates Tracking 92219 as yet unmatched pairs. 9149 records in RAM. INFO 2026-06-08 08:58:01 MarkDuplicates Read 603,000,000 records. Elapsed time: 00:19:51s. Time for last 1,000,000: 1s. Last read position: chr21:45,509,493 INFO 2026-06-08 08:58:01 MarkDuplicates Tracking 89177 as yet unmatched pairs. 6106 records in RAM. INFO 2026-06-08 08:58:02 MarkDuplicates Read 604,000,000 records. Elapsed time: 00:19:52s. Time for last 1,000,000: 1s. Last read position: chr21:46,116,770 INFO 2026-06-08 08:58:02 MarkDuplicates Tracking 87271 as yet unmatched pairs. 4200 records in RAM. INFO 2026-06-08 08:58:04 MarkDuplicates Read 605,000,000 records. Elapsed time: 00:19:54s. Time for last 1,000,000: 1s. Last read position: chr22:17,734,236 INFO 2026-06-08 08:58:04 MarkDuplicates Tracking 82787 as yet unmatched pairs. 37375 records in RAM. INFO 2026-06-08 08:58:05 MarkDuplicates Read 606,000,000 records. Elapsed time: 00:19:55s. Time for last 1,000,000: 1s. Last read position: chr22:20,798,636 INFO 2026-06-08 08:58:05 MarkDuplicates Tracking 80512 as yet unmatched pairs. 35099 records in RAM. INFO 2026-06-08 08:58:07 MarkDuplicates Read 607,000,000 records. Elapsed time: 00:19:57s. Time for last 1,000,000: 1s. Last read position: chr22:23,622,093 INFO 2026-06-08 08:58:07 MarkDuplicates Tracking 76753 as yet unmatched pairs. 31338 records in RAM. INFO 2026-06-08 08:58:08 MarkDuplicates Read 608,000,000 records. Elapsed time: 00:19:58s. Time for last 1,000,000: 1s. Last read position: chr22:24,232,849 INFO 2026-06-08 08:58:08 MarkDuplicates Tracking 73579 as yet unmatched pairs. 28162 records in RAM. INFO 2026-06-08 08:58:10 MarkDuplicates Read 609,000,000 records. Elapsed time: 00:20:00s. Time for last 1,000,000: 1s. Last read position: chr22:28,797,089 INFO 2026-06-08 08:58:10 MarkDuplicates Tracking 77364 as yet unmatched pairs. 31947 records in RAM. INFO 2026-06-08 08:58:11 MarkDuplicates Read 610,000,000 records. Elapsed time: 00:20:01s. Time for last 1,000,000: 1s. Last read position: chr22:29,299,798 INFO 2026-06-08 08:58:11 MarkDuplicates Tracking 68180 as yet unmatched pairs. 22758 records in RAM. INFO 2026-06-08 08:58:13 MarkDuplicates Read 611,000,000 records. Elapsed time: 00:20:03s. Time for last 1,000,000: 1s. Last read position: chr22:31,619,808 INFO 2026-06-08 08:58:13 MarkDuplicates Tracking 65217 as yet unmatched pairs. 19792 records in RAM. INFO 2026-06-08 08:58:14 MarkDuplicates Read 612,000,000 records. Elapsed time: 00:20:04s. Time for last 1,000,000: 1s. Last read position: chr22:36,305,976 INFO 2026-06-08 08:58:14 MarkDuplicates Tracking 63432 as yet unmatched pairs. 18005 records in RAM. INFO 2026-06-08 08:58:16 MarkDuplicates Read 613,000,000 records. Elapsed time: 00:20:06s. Time for last 1,000,000: 1s. Last read position: chr22:38,247,816 INFO 2026-06-08 08:58:16 MarkDuplicates Tracking 60297 as yet unmatched pairs. 14870 records in RAM. INFO 2026-06-08 08:58:17 MarkDuplicates Read 614,000,000 records. Elapsed time: 00:20:07s. Time for last 1,000,000: 1s. Last read position: chr22:40,418,429 INFO 2026-06-08 08:58:17 MarkDuplicates Tracking 56891 as yet unmatched pairs. 11464 records in RAM. INFO 2026-06-08 08:58:18 MarkDuplicates Read 615,000,000 records. Elapsed time: 00:20:08s. Time for last 1,000,000: 1s. Last read position: chr22:41,893,166 INFO 2026-06-08 08:58:18 MarkDuplicates Tracking 54467 as yet unmatched pairs. 9035 records in RAM. INFO 2026-06-08 08:58:21 MarkDuplicates Read 616,000,000 records. Elapsed time: 00:20:10s. Time for last 1,000,000: 2s. Last read position: chr22:45,525,664 INFO 2026-06-08 08:58:21 MarkDuplicates Tracking 51806 as yet unmatched pairs. 6373 records in RAM. INFO 2026-06-08 08:58:22 MarkDuplicates Read 617,000,000 records. Elapsed time: 00:20:12s. Time for last 1,000,000: 1s. Last read position: chr22:50,280,751 INFO 2026-06-08 08:58:22 MarkDuplicates Tracking 48623 as yet unmatched pairs. 3188 records in RAM. INFO 2026-06-08 08:58:24 MarkDuplicates Read 618,000,000 records. Elapsed time: 00:20:14s. Time for last 1,000,000: 2s. Last read position: chrX:2,266,759 INFO 2026-06-08 08:58:24 MarkDuplicates Tracking 44888 as yet unmatched pairs. 38968 records in RAM. INFO 2026-06-08 08:58:26 MarkDuplicates Read 619,000,000 records. Elapsed time: 00:20:16s. Time for last 1,000,000: 1s. Last read position: chrX:10,015,304 INFO 2026-06-08 08:58:26 MarkDuplicates Tracking 42138 as yet unmatched pairs. 36217 records in RAM. INFO 2026-06-08 08:58:27 MarkDuplicates Read 620,000,000 records. Elapsed time: 00:20:17s. Time for last 1,000,000: 1s. Last read position: chrX:21,940,807 INFO 2026-06-08 08:58:27 MarkDuplicates Tracking 40176 as yet unmatched pairs. 34254 records in RAM. INFO 2026-06-08 08:58:29 MarkDuplicates Read 621,000,000 records. Elapsed time: 00:20:19s. Time for last 1,000,000: 1s. Last read position: chrX:40,680,811 INFO 2026-06-08 08:58:29 MarkDuplicates Tracking 37717 as yet unmatched pairs. 31794 records in RAM. INFO 2026-06-08 08:58:30 MarkDuplicates Read 622,000,000 records. Elapsed time: 00:20:20s. Time for last 1,000,000: 1s. Last read position: chrX:47,227,078 INFO 2026-06-08 08:58:30 MarkDuplicates Tracking 35117 as yet unmatched pairs. 29192 records in RAM. INFO 2026-06-08 08:58:32 MarkDuplicates Read 623,000,000 records. Elapsed time: 00:20:22s. Time for last 1,000,000: 1s. Last read position: chrX:51,895,107 INFO 2026-06-08 08:58:32 MarkDuplicates Tracking 32976 as yet unmatched pairs. 27051 records in RAM. INFO 2026-06-08 08:58:34 MarkDuplicates Read 624,000,000 records. Elapsed time: 00:20:24s. Time for last 1,000,000: 1s. Last read position: chrX:53,617,058 INFO 2026-06-08 08:58:34 MarkDuplicates Tracking 30537 as yet unmatched pairs. 24612 records in RAM. INFO 2026-06-08 08:58:35 MarkDuplicates Read 625,000,000 records. Elapsed time: 00:20:25s. Time for last 1,000,000: 1s. Last read position: chrX:70,500,543 INFO 2026-06-08 08:58:35 MarkDuplicates Tracking 27090 as yet unmatched pairs. 21165 records in RAM. INFO 2026-06-08 08:58:37 MarkDuplicates Read 626,000,000 records. Elapsed time: 00:20:26s. Time for last 1,000,000: 1s. Last read position: chrX:74,592,034 INFO 2026-06-08 08:58:37 MarkDuplicates Tracking 24574 as yet unmatched pairs. 18649 records in RAM. INFO 2026-06-08 08:58:38 MarkDuplicates Read 627,000,000 records. Elapsed time: 00:20:28s. Time for last 1,000,000: 1s. Last read position: chrX:100,646,255 INFO 2026-06-08 08:58:38 MarkDuplicates Tracking 22274 as yet unmatched pairs. 16349 records in RAM. INFO 2026-06-08 08:58:40 MarkDuplicates Read 628,000,000 records. Elapsed time: 00:20:30s. Time for last 1,000,000: 1s. Last read position: chrX:118,761,145 INFO 2026-06-08 08:58:40 MarkDuplicates Tracking 20445 as yet unmatched pairs. 14519 records in RAM. INFO 2026-06-08 08:58:41 MarkDuplicates Read 629,000,000 records. Elapsed time: 00:20:31s. Time for last 1,000,000: 1s. Last read position: chrX:130,140,593 INFO 2026-06-08 08:58:41 MarkDuplicates Tracking 17392 as yet unmatched pairs. 11466 records in RAM. INFO 2026-06-08 08:58:43 MarkDuplicates Read 630,000,000 records. Elapsed time: 00:20:33s. Time for last 1,000,000: 1s. Last read position: chrX:153,508,326 INFO 2026-06-08 08:58:43 MarkDuplicates Tracking 16056 as yet unmatched pairs. 10130 records in RAM. INFO 2026-06-08 08:58:44 MarkDuplicates Read 631,000,000 records. Elapsed time: 00:20:34s. Time for last 1,000,000: 1s. Last read position: chrX:154,352,788 INFO 2026-06-08 08:58:44 MarkDuplicates Tracking 15019 as yet unmatched pairs. 9092 records in RAM. INFO 2026-06-08 08:58:46 MarkDuplicates Read 632,000,000 records. Elapsed time: 00:20:36s. Time for last 1,000,000: 1s. Last read position: chrX:154,366,138 INFO 2026-06-08 08:58:46 MarkDuplicates Tracking 11561 as yet unmatched pairs. 5634 records in RAM. INFO 2026-06-08 08:58:48 MarkDuplicates Read 633,000,000 records. Elapsed time: 00:20:38s. Time for last 1,000,000: 1s. Last read position: chrX:155,046,573 INFO 2026-06-08 08:58:48 MarkDuplicates Tracking 6298 as yet unmatched pairs. 371 records in RAM. INFO 2026-06-08 08:58:49 MarkDuplicates Read 634,000,000 records. Elapsed time: 00:20:39s. Time for last 1,000,000: 1s. Last read position: GL000220.1:158,167 INFO 2026-06-08 08:58:49 MarkDuplicates Tracking 3914 as yet unmatched pairs. 55 records in RAM. INFO 2026-06-08 08:58:50 MarkDuplicates Read 635,000,000 records. Elapsed time: 00:20:40s. Time for last 1,000,000: 1s. Last read position: KI270733.1:178,324 INFO 2026-06-08 08:58:50 MarkDuplicates Tracking 37 as yet unmatched pairs. 3 records in RAM. INFO 2026-06-08 08:58:50 MarkDuplicates Read 635075698 records. 0 pairs never matched. INFO 2026-06-08 08:59:36 MarkDuplicates After buildSortedReadEndLists freeMemory: 204139896; totalMemory: 234881024; maxMemory: 63585648640 INFO 2026-06-08 08:59:36 MarkDuplicates Will retain up to 1987051520 duplicate indices before spilling to disk. INFO 2026-06-08 08:59:40 MarkDuplicates Traversing read pair information and detecting duplicates. WARNING 2026-06-08 08:59:40 SortingCollection There is not enough memory per file for buffering. Reading will be unbuffered. INFO 2026-06-08 08:59:51 OpticalDuplicateFinder Large duplicate set. size = 1381 INFO 2026-06-08 08:59:51 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-22,711 INFO 2026-06-08 08:59:51 OpticalDuplicateFinder Large duplicate set. size = 1152 INFO 2026-06-08 08:59:51 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:9,357 INFO 2026-06-08 08:59:51 OpticalDuplicateFinder Large duplicate set. size = 3475 INFO 2026-06-08 08:59:51 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-30,906 INFO 2026-06-08 08:59:51 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:12,771 INFO 2026-06-08 08:59:51 OpticalDuplicateFinder compared 3,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:27,794 INFO 2026-06-08 08:59:51 OpticalDuplicateFinder Large duplicate set. size = 1964 INFO 2026-06-08 08:59:51 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-18,763 INFO 2026-06-08 08:59:51 OpticalDuplicateFinder Large duplicate set. size = 1966 INFO 2026-06-08 08:59:51 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:22,123 INFO 2026-06-08 08:59:51 OpticalDuplicateFinder Large duplicate set. size = 1285 INFO 2026-06-08 08:59:51 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:11,800 INFO 2026-06-08 08:59:51 OpticalDuplicateFinder Large duplicate set. size = 2903 INFO 2026-06-08 08:59:51 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-17,865 INFO 2026-06-08 08:59:51 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:9,915 INFO 2026-06-08 08:59:51 OpticalDuplicateFinder Large duplicate set. size = 1357 INFO 2026-06-08 08:59:51 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-25,922 INFO 2026-06-08 08:59:51 OpticalDuplicateFinder Large duplicate set. size = 1808 INFO 2026-06-08 08:59:51 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:26,484 INFO 2026-06-08 08:59:51 OpticalDuplicateFinder Large duplicate set. size = 1056 INFO 2026-06-08 08:59:51 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:30,666 INFO 2026-06-08 08:59:51 OpticalDuplicateFinder Large duplicate set. size = 1679 INFO 2026-06-08 08:59:51 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-20,745 INFO 2026-06-08 08:59:51 OpticalDuplicateFinder Large duplicate set. size = 1291 INFO 2026-06-08 08:59:51 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-22,541 INFO 2026-06-08 08:59:51 OpticalDuplicateFinder Large duplicate set. size = 1431 INFO 2026-06-08 08:59:51 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-22,630 INFO 2026-06-08 08:59:51 OpticalDuplicateFinder Large duplicate set. size = 1061 INFO 2026-06-08 08:59:51 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-32,314 INFO 2026-06-08 08:59:51 OpticalDuplicateFinder Large duplicate set. size = 1208 INFO 2026-06-08 08:59:51 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-18,116 INFO 2026-06-08 08:59:52 OpticalDuplicateFinder Large duplicate set. size = 1425 INFO 2026-06-08 08:59:52 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-22,047 INFO 2026-06-08 08:59:52 OpticalDuplicateFinder Large duplicate set. size = 1612 INFO 2026-06-08 08:59:52 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:8,435 INFO 2026-06-08 08:59:52 OpticalDuplicateFinder Large duplicate set. size = 1370 INFO 2026-06-08 08:59:52 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-26,440 INFO 2026-06-08 08:59:52 OpticalDuplicateFinder Large duplicate set. size = 1834 INFO 2026-06-08 08:59:52 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:4,673 INFO 2026-06-08 08:59:52 OpticalDuplicateFinder Large duplicate set. size = 3516 INFO 2026-06-08 08:59:52 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:31,588 INFO 2026-06-08 08:59:52 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-15,341 INFO 2026-06-08 08:59:52 OpticalDuplicateFinder compared 3,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:23,142 INFO 2026-06-08 08:59:52 OpticalDuplicateFinder Large duplicate set. size = 1066 INFO 2026-06-08 08:59:52 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-27,249 INFO 2026-06-08 08:59:52 OpticalDuplicateFinder Large duplicate set. size = 2105 INFO 2026-06-08 08:59:52 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:11,436 INFO 2026-06-08 08:59:52 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-19,952 INFO 2026-06-08 08:59:52 OpticalDuplicateFinder Large duplicate set. size = 1079 INFO 2026-06-08 08:59:52 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-23,932 INFO 2026-06-08 08:59:52 OpticalDuplicateFinder Large duplicate set. size = 3899 INFO 2026-06-08 08:59:52 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-21,983 INFO 2026-06-08 08:59:52 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:22,875 INFO 2026-06-08 08:59:52 OpticalDuplicateFinder compared 3,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-32,314 INFO 2026-06-08 08:59:52 OpticalDuplicateFinder Large duplicate set. size = 1294 INFO 2026-06-08 08:59:52 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-29,660 INFO 2026-06-08 08:59:52 OpticalDuplicateFinder Large duplicate set. size = 1010 INFO 2026-06-08 08:59:52 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:27,616 INFO 2026-06-08 08:59:52 OpticalDuplicateFinder Large duplicate set. size = 1020 INFO 2026-06-08 08:59:52 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:31,483 INFO 2026-06-08 08:59:52 OpticalDuplicateFinder Large duplicate set. size = 1295 INFO 2026-06-08 08:59:52 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:4,131 INFO 2026-06-08 08:59:52 OpticalDuplicateFinder Large duplicate set. size = 1707 INFO 2026-06-08 08:59:52 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:26,500 INFO 2026-06-08 08:59:52 OpticalDuplicateFinder Large duplicate set. size = 1969 INFO 2026-06-08 08:59:52 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-17,056 INFO 2026-06-08 08:59:52 OpticalDuplicateFinder Large duplicate set. size = 1400 INFO 2026-06-08 08:59:52 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-13,820 INFO 2026-06-08 08:59:52 OpticalDuplicateFinder Large duplicate set. size = 1063 INFO 2026-06-08 08:59:52 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-22,476 INFO 2026-06-08 08:59:52 OpticalDuplicateFinder Large duplicate set. size = 1228 INFO 2026-06-08 08:59:52 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-21,044 INFO 2026-06-08 08:59:52 OpticalDuplicateFinder Large duplicate set. size = 1156 INFO 2026-06-08 08:59:52 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:9,527 INFO 2026-06-08 08:59:52 OpticalDuplicateFinder Large duplicate set. size = 1305 INFO 2026-06-08 08:59:52 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:18,361 INFO 2026-06-08 08:59:52 OpticalDuplicateFinder Large duplicate set. size = 1559 INFO 2026-06-08 08:59:52 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:29,275 INFO 2026-06-08 08:59:52 OpticalDuplicateFinder Large duplicate set. size = 1540 INFO 2026-06-08 08:59:52 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:23,806 INFO 2026-06-08 08:59:52 OpticalDuplicateFinder Large duplicate set. size = 1040 INFO 2026-06-08 08:59:52 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:27,770 INFO 2026-06-08 08:59:52 OpticalDuplicateFinder Large duplicate set. size = 1250 INFO 2026-06-08 08:59:52 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-26,562 INFO 2026-06-08 08:59:52 OpticalDuplicateFinder Large duplicate set. size = 1250 INFO 2026-06-08 08:59:52 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:25,238 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder Large duplicate set. size = 1065 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-30,785 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder Large duplicate set. size = 1402 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-30,259 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder Large duplicate set. size = 1153 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-14,346 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder Large duplicate set. size = 1606 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:10,846 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder Large duplicate set. size = 1108 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:15,004 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder Large duplicate set. size = 1058 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:7,804 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder Large duplicate set. size = 1050 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:1,057 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder Large duplicate set. size = 1112 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-20,065 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder Large duplicate set. size = 1574 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:21,427 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder Large duplicate set. size = 1200 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-22,063 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder Large duplicate set. size = 1352 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:17,042 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder Large duplicate set. size = 1214 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-18,253 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder Large duplicate set. size = 2871 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:13,790 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:13,127 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder Large duplicate set. size = 2444 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:4,932 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:27,325 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder Large duplicate set. size = 1585 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:29,315 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder Large duplicate set. size = 2401 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-23,050 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:5,611 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder Large duplicate set. size = 1194 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-17,476 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder Large duplicate set. size = 1161 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:4,956 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder Large duplicate set. size = 1410 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-18,051 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder Large duplicate set. size = 1390 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:21,880 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder Large duplicate set. size = 1208 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:28,927 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder Large duplicate set. size = 1119 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:2,578 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder Large duplicate set. size = 1335 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-17,339 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder Large duplicate set. size = 1161 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:21,209 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder Large duplicate set. size = 2083 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:16,468 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:9,737 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder Large duplicate set. size = 1106 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-31,974 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder Large duplicate set. size = 1056 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:11,905 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder Large duplicate set. size = 1103 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:6,776 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder Large duplicate set. size = 1095 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:1,243 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder Large duplicate set. size = 2231 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:28,336 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:9,147 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder Large duplicate set. size = 1057 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:20,586 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder Large duplicate set. size = 1119 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-29,927 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder Large duplicate set. size = 1015 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:8,370 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder Large duplicate set. size = 1914 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-15,956 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder Large duplicate set. size = 1121 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:29,258 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder Large duplicate set. size = 1067 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:22,495 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder Large duplicate set. size = 1066 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:30,067 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder Large duplicate set. size = 2046 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:14,276 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:3,484 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder Large duplicate set. size = 1102 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-15,381 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder Large duplicate set. size = 1023 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:21,791 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder Large duplicate set. size = 1323 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:23,045 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder Large duplicate set. size = 1240 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-24,288 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder Large duplicate set. size = 1526 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:26,945 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder Large duplicate set. size = 1226 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:19,777 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder Large duplicate set. size = 1486 INFO 2026-06-08 08:59:53 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-16,878 INFO 2026-06-08 08:59:54 OpticalDuplicateFinder Large duplicate set. size = 1218 INFO 2026-06-08 08:59:54 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:11,744 INFO 2026-06-08 08:59:54 OpticalDuplicateFinder Large duplicate set. size = 1077 INFO 2026-06-08 08:59:54 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-20,494 INFO 2026-06-08 08:59:54 OpticalDuplicateFinder Large duplicate set. size = 1232 INFO 2026-06-08 08:59:54 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-25,437 INFO 2026-06-08 08:59:54 OpticalDuplicateFinder Large duplicate set. size = 1691 INFO 2026-06-08 08:59:54 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:23,167 INFO 2026-06-08 08:59:54 OpticalDuplicateFinder Large duplicate set. size = 1180 INFO 2026-06-08 08:59:54 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-27,799 INFO 2026-06-08 08:59:54 OpticalDuplicateFinder Large duplicate set. size = 1166 INFO 2026-06-08 08:59:54 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-23,625 INFO 2026-06-08 08:59:54 OpticalDuplicateFinder Large duplicate set. size = 1265 INFO 2026-06-08 08:59:54 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-24,183 INFO 2026-06-08 08:59:54 OpticalDuplicateFinder Large duplicate set. size = 1315 INFO 2026-06-08 08:59:54 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-24,814 INFO 2026-06-08 08:59:54 OpticalDuplicateFinder Large duplicate set. size = 1100 INFO 2026-06-08 08:59:54 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:27,479 INFO 2026-06-08 08:59:54 OpticalDuplicateFinder Large duplicate set. size = 1774 INFO 2026-06-08 08:59:54 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:17,868 INFO 2026-06-08 08:59:54 OpticalDuplicateFinder Large duplicate set. size = 2300 INFO 2026-06-08 08:59:54 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:7,343 INFO 2026-06-08 08:59:54 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-25,712 INFO 2026-06-08 08:59:54 OpticalDuplicateFinder Large duplicate set. size = 1282 INFO 2026-06-08 08:59:54 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-27,702 INFO 2026-06-08 08:59:54 OpticalDuplicateFinder Large duplicate set. size = 1461 INFO 2026-06-08 08:59:54 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:9,939 INFO 2026-06-08 08:59:54 OpticalDuplicateFinder Large duplicate set. size = 1109 INFO 2026-06-08 08:59:54 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:13,653 INFO 2026-06-08 08:59:54 OpticalDuplicateFinder Large duplicate set. size = 1534 INFO 2026-06-08 08:59:54 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:29,315 INFO 2026-06-08 08:59:54 OpticalDuplicateFinder Large duplicate set. size = 1345 INFO 2026-06-08 08:59:54 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:21,419 INFO 2026-06-08 08:59:54 OpticalDuplicateFinder Large duplicate set. size = 1837 INFO 2026-06-08 08:59:54 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-15,600 INFO 2026-06-08 08:59:54 OpticalDuplicateFinder Large duplicate set. size = 1358 INFO 2026-06-08 08:59:54 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:25,755 INFO 2026-06-08 08:59:54 OpticalDuplicateFinder Large duplicate set. size = 1532 INFO 2026-06-08 08:59:54 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-15,858 INFO 2026-06-08 08:59:54 OpticalDuplicateFinder Large duplicate set. size = 1102 INFO 2026-06-08 08:59:54 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:14,251 INFO 2026-06-08 08:59:54 OpticalDuplicateFinder Large duplicate set. size = 1039 INFO 2026-06-08 08:59:54 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:24,914 INFO 2026-06-08 08:59:54 OpticalDuplicateFinder Large duplicate set. size = 1551 INFO 2026-06-08 08:59:54 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-22,646 INFO 2026-06-08 08:59:55 OpticalDuplicateFinder Large duplicate set. size = 1004 INFO 2026-06-08 08:59:55 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:14,009 INFO 2026-06-08 08:59:55 OpticalDuplicateFinder Large duplicate set. size = 1084 INFO 2026-06-08 08:59:55 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:4,471 INFO 2026-06-08 08:59:55 OpticalDuplicateFinder Large duplicate set. size = 1044 INFO 2026-06-08 08:59:55 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-29,393 INFO 2026-06-08 08:59:55 OpticalDuplicateFinder Large duplicate set. size = 1076 INFO 2026-06-08 08:59:55 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-28,430 INFO 2026-06-08 08:59:55 OpticalDuplicateFinder Large duplicate set. size = 1672 INFO 2026-06-08 08:59:55 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:4,252 INFO 2026-06-08 08:59:55 OpticalDuplicateFinder Large duplicate set. size = 1139 INFO 2026-06-08 08:59:55 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-17,048 INFO 2026-06-08 08:59:55 OpticalDuplicateFinder Large duplicate set. size = 1286 INFO 2026-06-08 08:59:55 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:5,506 INFO 2026-06-08 08:59:55 OpticalDuplicateFinder Large duplicate set. size = 1425 INFO 2026-06-08 08:59:55 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:27,810 INFO 2026-06-08 08:59:55 OpticalDuplicateFinder Large duplicate set. size = 1184 INFO 2026-06-08 08:59:55 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-17,193 INFO 2026-06-08 08:59:55 OpticalDuplicateFinder Large duplicate set. size = 1261 INFO 2026-06-08 08:59:55 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:3,904 INFO 2026-06-08 08:59:55 OpticalDuplicateFinder Large duplicate set. size = 1992 INFO 2026-06-08 08:59:55 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-31,108 INFO 2026-06-08 08:59:55 OpticalDuplicateFinder Large duplicate set. size = 2564 INFO 2026-06-08 08:59:55 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-30,785 INFO 2026-06-08 08:59:55 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:30,375 INFO 2026-06-08 08:59:55 OpticalDuplicateFinder Large duplicate set. size = 1202 INFO 2026-06-08 08:59:55 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-29,652 INFO 2026-06-08 08:59:55 OpticalDuplicateFinder Large duplicate set. size = 1003 INFO 2026-06-08 08:59:55 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-19,531 INFO 2026-06-08 08:59:55 OpticalDuplicateFinder Large duplicate set. size = 2276 INFO 2026-06-08 08:59:55 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-15,689 INFO 2026-06-08 08:59:55 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-30,331 INFO 2026-06-08 08:59:55 OpticalDuplicateFinder Large duplicate set. size = 1769 INFO 2026-06-08 08:59:55 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:2,424 INFO 2026-06-08 08:59:55 OpticalDuplicateFinder Large duplicate set. size = 1057 INFO 2026-06-08 08:59:55 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:4,948 INFO 2026-06-08 08:59:55 OpticalDuplicateFinder Large duplicate set. size = 1017 INFO 2026-06-08 08:59:55 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-16,449 INFO 2026-06-08 08:59:56 OpticalDuplicateFinder Large duplicate set. size = 1470 INFO 2026-06-08 08:59:56 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:9,171 INFO 2026-06-08 08:59:56 OpticalDuplicateFinder Large duplicate set. size = 1416 INFO 2026-06-08 08:59:56 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:16,039 INFO 2026-06-08 08:59:56 OpticalDuplicateFinder Large duplicate set. size = 1194 INFO 2026-06-08 08:59:56 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-25,761 INFO 2026-06-08 08:59:56 OpticalDuplicateFinder Large duplicate set. size = 1208 INFO 2026-06-08 08:59:56 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-20,664 INFO 2026-06-08 08:59:56 OpticalDuplicateFinder Large duplicate set. size = 1356 INFO 2026-06-08 08:59:56 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:30,019 INFO 2026-06-08 08:59:56 OpticalDuplicateFinder Large duplicate set. size = 1373 INFO 2026-06-08 08:59:56 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:19,825 INFO 2026-06-08 08:59:56 OpticalDuplicateFinder Large duplicate set. size = 1422 INFO 2026-06-08 08:59:56 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-17,323 INFO 2026-06-08 08:59:56 OpticalDuplicateFinder Large duplicate set. size = 1066 INFO 2026-06-08 08:59:56 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:3,144 INFO 2026-06-08 08:59:56 OpticalDuplicateFinder Large duplicate set. size = 1820 INFO 2026-06-08 08:59:56 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:25,626 INFO 2026-06-08 08:59:56 OpticalDuplicateFinder Large duplicate set. size = 1170 INFO 2026-06-08 08:59:56 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:31,863 INFO 2026-06-08 08:59:56 OpticalDuplicateFinder Large duplicate set. size = 1042 INFO 2026-06-08 08:59:56 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:17,196 INFO 2026-06-08 08:59:56 OpticalDuplicateFinder Large duplicate set. size = 1260 INFO 2026-06-08 08:59:56 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:9,422 INFO 2026-06-08 08:59:57 OpticalDuplicateFinder Large duplicate set. size = 1039 INFO 2026-06-08 08:59:57 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:5,336 INFO 2026-06-08 08:59:57 OpticalDuplicateFinder Large duplicate set. size = 1221 INFO 2026-06-08 08:59:57 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-29,142 INFO 2026-06-08 08:59:57 OpticalDuplicateFinder Large duplicate set. size = 2721 INFO 2026-06-08 08:59:57 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:16,460 INFO 2026-06-08 08:59:57 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-27,265 INFO 2026-06-08 08:59:57 OpticalDuplicateFinder Large duplicate set. size = 1069 INFO 2026-06-08 08:59:57 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-21,708 INFO 2026-06-08 08:59:57 OpticalDuplicateFinder Large duplicate set. size = 1282 INFO 2026-06-08 08:59:57 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:2,408 INFO 2026-06-08 08:59:57 OpticalDuplicateFinder Large duplicate set. size = 1107 INFO 2026-06-08 08:59:57 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:21,905 INFO 2026-06-08 08:59:57 OpticalDuplicateFinder Large duplicate set. size = 1299 INFO 2026-06-08 08:59:57 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-28,778 INFO 2026-06-08 08:59:57 OpticalDuplicateFinder Large duplicate set. size = 1434 INFO 2026-06-08 08:59:57 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:2,472 INFO 2026-06-08 08:59:57 OpticalDuplicateFinder Large duplicate set. size = 2335 INFO 2026-06-08 08:59:57 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-22,881 INFO 2026-06-08 08:59:57 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-16,231 INFO 2026-06-08 08:59:57 OpticalDuplicateFinder Large duplicate set. size = 1042 INFO 2026-06-08 08:59:57 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-30,744 INFO 2026-06-08 08:59:57 OpticalDuplicateFinder Large duplicate set. size = 1873 INFO 2026-06-08 08:59:57 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-22,848 INFO 2026-06-08 08:59:57 OpticalDuplicateFinder Large duplicate set. size = 1369 INFO 2026-06-08 08:59:57 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:30,019 INFO 2026-06-08 08:59:57 OpticalDuplicateFinder Large duplicate set. size = 1242 INFO 2026-06-08 08:59:57 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-15,397 INFO 2026-06-08 08:59:57 OpticalDuplicateFinder Large duplicate set. size = 1383 INFO 2026-06-08 08:59:57 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-17,509 INFO 2026-06-08 08:59:57 OpticalDuplicateFinder Large duplicate set. size = 1075 INFO 2026-06-08 08:59:57 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-30,008 INFO 2026-06-08 08:59:57 OpticalDuplicateFinder Large duplicate set. size = 1776 INFO 2026-06-08 08:59:57 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:3,459 INFO 2026-06-08 08:59:57 OpticalDuplicateFinder Large duplicate set. size = 1029 INFO 2026-06-08 08:59:57 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:9,155 INFO 2026-06-08 08:59:57 OpticalDuplicateFinder Large duplicate set. size = 1085 INFO 2026-06-08 08:59:57 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:2,966 INFO 2026-06-08 08:59:57 OpticalDuplicateFinder Large duplicate set. size = 1285 INFO 2026-06-08 08:59:57 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-18,585 INFO 2026-06-08 08:59:57 OpticalDuplicateFinder Large duplicate set. size = 1053 INFO 2026-06-08 08:59:57 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-32,645 INFO 2026-06-08 08:59:57 OpticalDuplicateFinder Large duplicate set. size = 1246 INFO 2026-06-08 08:59:57 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:5,668 INFO 2026-06-08 08:59:57 OpticalDuplicateFinder Large duplicate set. size = 1488 INFO 2026-06-08 08:59:57 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:4,204 INFO 2026-06-08 08:59:57 OpticalDuplicateFinder Large duplicate set. size = 1194 INFO 2026-06-08 08:59:57 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-22,614 INFO 2026-06-08 08:59:57 OpticalDuplicateFinder Large duplicate set. size = 1287 INFO 2026-06-08 08:59:57 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:32,640 INFO 2026-06-08 08:59:57 OpticalDuplicateFinder Large duplicate set. size = 1276 INFO 2026-06-08 08:59:57 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:29,849 INFO 2026-06-08 08:59:57 OpticalDuplicateFinder Large duplicate set. size = 1085 INFO 2026-06-08 08:59:57 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-17,096 INFO 2026-06-08 08:59:58 OpticalDuplicateFinder Large duplicate set. size = 1050 INFO 2026-06-08 08:59:58 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:12,399 INFO 2026-06-08 08:59:58 OpticalDuplicateFinder Large duplicate set. size = 1115 INFO 2026-06-08 08:59:58 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-14,669 INFO 2026-06-08 08:59:58 OpticalDuplicateFinder Large duplicate set. size = 1925 INFO 2026-06-08 08:59:58 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:31,402 INFO 2026-06-08 08:59:58 OpticalDuplicateFinder Large duplicate set. size = 1827 INFO 2026-06-08 08:59:58 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:30,949 INFO 2026-06-08 08:59:58 OpticalDuplicateFinder Large duplicate set. size = 1236 INFO 2026-06-08 08:59:58 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:6,404 INFO 2026-06-08 08:59:58 OpticalDuplicateFinder Large duplicate set. size = 1705 INFO 2026-06-08 08:59:58 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:7,043 INFO 2026-06-08 08:59:58 OpticalDuplicateFinder Large duplicate set. size = 1382 INFO 2026-06-08 08:59:58 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-21,651 INFO 2026-06-08 08:59:58 OpticalDuplicateFinder Large duplicate set. size = 1511 INFO 2026-06-08 08:59:58 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:23,692 INFO 2026-06-08 08:59:58 OpticalDuplicateFinder Large duplicate set. size = 1104 INFO 2026-06-08 08:59:58 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:32,753 INFO 2026-06-08 08:59:58 OpticalDuplicateFinder Large duplicate set. size = 1076 INFO 2026-06-08 08:59:58 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:3,176 INFO 2026-06-08 08:59:58 OpticalDuplicateFinder Large duplicate set. size = 1268 INFO 2026-06-08 08:59:58 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-28,633 INFO 2026-06-08 08:59:58 OpticalDuplicateFinder Large duplicate set. size = 1079 INFO 2026-06-08 08:59:58 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-28,980 INFO 2026-06-08 08:59:58 OpticalDuplicateFinder Large duplicate set. size = 1113 INFO 2026-06-08 08:59:58 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:7,456 INFO 2026-06-08 08:59:58 OpticalDuplicateFinder Large duplicate set. size = 1614 INFO 2026-06-08 08:59:58 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:21,241 INFO 2026-06-08 08:59:58 OpticalDuplicateFinder Large duplicate set. size = 1278 INFO 2026-06-08 08:59:58 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-31,375 INFO 2026-06-08 08:59:58 OpticalDuplicateFinder Large duplicate set. size = 1222 INFO 2026-06-08 08:59:58 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:11,493 INFO 2026-06-08 08:59:58 OpticalDuplicateFinder Large duplicate set. size = 1565 INFO 2026-06-08 08:59:58 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:13,200 INFO 2026-06-08 08:59:58 OpticalDuplicateFinder Large duplicate set. size = 1323 INFO 2026-06-08 08:59:58 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-16,854 INFO 2026-06-08 08:59:58 OpticalDuplicateFinder Large duplicate set. size = 1250 INFO 2026-06-08 08:59:58 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:2,610 INFO 2026-06-08 08:59:58 OpticalDuplicateFinder Large duplicate set. size = 1890 INFO 2026-06-08 08:59:58 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-21,934 INFO 2026-06-08 08:59:58 OpticalDuplicateFinder Large duplicate set. size = 1509 INFO 2026-06-08 08:59:58 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-28,819 INFO 2026-06-08 08:59:58 OpticalDuplicateFinder Large duplicate set. size = 3325 INFO 2026-06-08 08:59:58 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-26,837 INFO 2026-06-08 08:59:58 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:27,899 INFO 2026-06-08 08:59:58 OpticalDuplicateFinder compared 3,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:30,310 INFO 2026-06-08 08:59:58 OpticalDuplicateFinder Large duplicate set. size = 1356 INFO 2026-06-08 08:59:58 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:13,661 INFO 2026-06-08 08:59:58 OpticalDuplicateFinder Large duplicate set. size = 2868 INFO 2026-06-08 08:59:58 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-19,070 INFO 2026-06-08 08:59:58 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:4,074 INFO 2026-06-08 08:59:58 OpticalDuplicateFinder Large duplicate set. size = 2557 INFO 2026-06-08 08:59:58 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-20,170 INFO 2026-06-08 08:59:58 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:20,699 INFO 2026-06-08 08:59:58 OpticalDuplicateFinder Large duplicate set. size = 1361 INFO 2026-06-08 08:59:58 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:27,600 INFO 2026-06-08 08:59:58 OpticalDuplicateFinder Large duplicate set. size = 1218 INFO 2026-06-08 08:59:58 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-18,803 INFO 2026-06-08 08:59:58 OpticalDuplicateFinder Large duplicate set. size = 1098 INFO 2026-06-08 08:59:58 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:11,218 INFO 2026-06-08 08:59:59 OpticalDuplicateFinder Large duplicate set. size = 1130 INFO 2026-06-08 08:59:59 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-18,099 INFO 2026-06-08 08:59:59 OpticalDuplicateFinder Large duplicate set. size = 1256 INFO 2026-06-08 08:59:59 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:4,649 INFO 2026-06-08 08:59:59 OpticalDuplicateFinder Large duplicate set. size = 1519 INFO 2026-06-08 08:59:59 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-28,689 INFO 2026-06-08 08:59:59 OpticalDuplicateFinder Large duplicate set. size = 1473 INFO 2026-06-08 08:59:59 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:23,935 INFO 2026-06-08 08:59:59 OpticalDuplicateFinder Large duplicate set. size = 1101 INFO 2026-06-08 08:59:59 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:2,157 INFO 2026-06-08 08:59:59 OpticalDuplicateFinder Large duplicate set. size = 1349 INFO 2026-06-08 08:59:59 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:12,286 INFO 2026-06-08 08:59:59 OpticalDuplicateFinder Large duplicate set. size = 1027 INFO 2026-06-08 08:59:59 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:28,571 INFO 2026-06-08 08:59:59 OpticalDuplicateFinder Large duplicate set. size = 1961 INFO 2026-06-08 08:59:59 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:9,430 INFO 2026-06-08 08:59:59 OpticalDuplicateFinder Large duplicate set. size = 1072 INFO 2026-06-08 08:59:59 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:15,052 INFO 2026-06-08 08:59:59 OpticalDuplicateFinder Large duplicate set. size = 1126 INFO 2026-06-08 08:59:59 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:9,260 INFO 2026-06-08 09:00:06 OpticalDuplicateFinder Large duplicate set. size = 1328 INFO 2026-06-08 09:00:06 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:6,331 INFO 2026-06-08 09:00:06 OpticalDuplicateFinder Large duplicate set. size = 2596 INFO 2026-06-08 09:00:06 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:14,971 INFO 2026-06-08 09:00:06 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-25,720 INFO 2026-06-08 09:00:06 OpticalDuplicateFinder Large duplicate set. size = 1126 INFO 2026-06-08 09:00:06 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:6,267 INFO 2026-06-08 09:00:10 OpticalDuplicateFinder Large duplicate set. size = 1437 INFO 2026-06-08 09:00:10 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:2,691 INFO 2026-06-08 09:00:10 OpticalDuplicateFinder Large duplicate set. size = 1260 INFO 2026-06-08 09:00:10 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-20,098 INFO 2026-06-08 09:00:12 OpticalDuplicateFinder Large duplicate set. size = 1029 INFO 2026-06-08 09:00:12 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:23,684 INFO 2026-06-08 09:00:22 OpticalDuplicateFinder Large duplicate set. size = 1032 INFO 2026-06-08 09:00:22 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:21,613 INFO 2026-06-08 09:00:39 OpticalDuplicateFinder Large duplicate set. size = 2664 INFO 2026-06-08 09:00:39 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-29,765 INFO 2026-06-08 09:00:39 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-30,841 INFO 2026-06-08 09:00:39 OpticalDuplicateFinder Large duplicate set. size = 1873 INFO 2026-06-08 09:00:39 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:3,435 INFO 2026-06-08 09:00:39 OpticalDuplicateFinder Large duplicate set. size = 1178 INFO 2026-06-08 09:00:40 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-17,808 INFO 2026-06-08 09:00:40 OpticalDuplicateFinder Large duplicate set. size = 1165 INFO 2026-06-08 09:00:40 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:4,689 INFO 2026-06-08 09:00:40 OpticalDuplicateFinder Large duplicate set. size = 2400 INFO 2026-06-08 09:00:40 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:23,579 INFO 2026-06-08 09:00:40 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:20,448 INFO 2026-06-08 09:00:40 OpticalDuplicateFinder Large duplicate set. size = 1057 INFO 2026-06-08 09:00:40 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:12,803 INFO 2026-06-08 09:00:40 OpticalDuplicateFinder Large duplicate set. size = 1007 INFO 2026-06-08 09:00:40 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:14,106 INFO 2026-06-08 09:00:40 OpticalDuplicateFinder Large duplicate set. size = 1464 INFO 2026-06-08 09:00:40 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-24,329 INFO 2026-06-08 09:00:40 OpticalDuplicateFinder Large duplicate set. size = 1066 INFO 2026-06-08 09:00:40 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:24,696 INFO 2026-06-08 09:00:40 OpticalDuplicateFinder Large duplicate set. size = 1451 INFO 2026-06-08 09:00:40 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:9,664 INFO 2026-06-08 09:00:40 OpticalDuplicateFinder Large duplicate set. size = 1689 INFO 2026-06-08 09:00:40 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:32,511 INFO 2026-06-08 09:00:40 OpticalDuplicateFinder Large duplicate set. size = 1121 INFO 2026-06-08 09:00:40 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:31,920 INFO 2026-06-08 09:00:40 OpticalDuplicateFinder Large duplicate set. size = 1064 INFO 2026-06-08 09:00:40 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:14,284 INFO 2026-06-08 09:00:40 OpticalDuplicateFinder Large duplicate set. size = 1990 INFO 2026-06-08 09:00:40 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:9,583 INFO 2026-06-08 09:00:40 OpticalDuplicateFinder Large duplicate set. size = 1201 INFO 2026-06-08 09:00:40 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-16,093 INFO 2026-06-08 09:00:40 OpticalDuplicateFinder Large duplicate set. size = 1346 INFO 2026-06-08 09:00:40 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:16,945 INFO 2026-06-08 09:00:40 OpticalDuplicateFinder Large duplicate set. size = 1022 INFO 2026-06-08 09:00:40 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-21,975 INFO 2026-06-08 09:00:40 OpticalDuplicateFinder Large duplicate set. size = 1009 INFO 2026-06-08 09:00:40 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:3,718 INFO 2026-06-08 09:00:40 OpticalDuplicateFinder Large duplicate set. size = 1343 INFO 2026-06-08 09:00:40 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:27,932 INFO 2026-06-08 09:00:40 OpticalDuplicateFinder Large duplicate set. size = 1315 INFO 2026-06-08 09:00:40 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:16,646 INFO 2026-06-08 09:00:40 OpticalDuplicateFinder Large duplicate set. size = 1181 INFO 2026-06-08 09:00:40 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-21,255 INFO 2026-06-08 09:00:40 OpticalDuplicateFinder Large duplicate set. size = 1149 INFO 2026-06-08 09:00:40 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-31,092 INFO 2026-06-08 09:00:40 OpticalDuplicateFinder Large duplicate set. size = 1271 INFO 2026-06-08 09:00:40 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-19,459 INFO 2026-06-08 09:00:40 OpticalDuplicateFinder Large duplicate set. size = 1426 INFO 2026-06-08 09:00:40 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-20,162 INFO 2026-06-08 09:00:40 OpticalDuplicateFinder Large duplicate set. size = 1044 INFO 2026-06-08 09:00:40 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-27,484 INFO 2026-06-08 09:00:40 OpticalDuplicateFinder Large duplicate set. size = 1192 INFO 2026-06-08 09:00:40 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:5,425 INFO 2026-06-08 09:00:40 OpticalDuplicateFinder Large duplicate set. size = 1020 INFO 2026-06-08 09:00:40 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:25,221 INFO 2026-06-08 09:00:40 OpticalDuplicateFinder Large duplicate set. size = 1427 INFO 2026-06-08 09:00:40 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:31,661 INFO 2026-06-08 09:00:40 OpticalDuplicateFinder Large duplicate set. size = 1250 INFO 2026-06-08 09:00:40 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-26,893 INFO 2026-06-08 09:00:40 OpticalDuplicateFinder Large duplicate set. size = 1428 INFO 2026-06-08 09:00:40 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:26,484 INFO 2026-06-08 09:00:40 OpticalDuplicateFinder Large duplicate set. size = 1072 INFO 2026-06-08 09:00:40 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:28,296 INFO 2026-06-08 09:00:40 OpticalDuplicateFinder Large duplicate set. size = 2946 INFO 2026-06-08 09:00:40 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-18,900 INFO 2026-06-08 09:00:40 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:31,313 INFO 2026-06-08 09:00:40 OpticalDuplicateFinder Large duplicate set. size = 1210 INFO 2026-06-08 09:00:40 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:26,904 INFO 2026-06-08 09:00:40 OpticalDuplicateFinder Large duplicate set. size = 1244 INFO 2026-06-08 09:00:40 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:26,572 INFO 2026-06-08 09:00:40 OpticalDuplicateFinder Large duplicate set. size = 1202 INFO 2026-06-08 09:00:40 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:22,301 INFO 2026-06-08 09:00:41 OpticalDuplicateFinder Large duplicate set. size = 1249 INFO 2026-06-08 09:00:41 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:10,668 INFO 2026-06-08 09:00:41 OpticalDuplicateFinder Large duplicate set. size = 1443 INFO 2026-06-08 09:00:41 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-23,390 INFO 2026-06-08 09:00:41 OpticalDuplicateFinder Large duplicate set. size = 1088 INFO 2026-06-08 09:00:41 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:26,144 INFO 2026-06-08 09:00:41 OpticalDuplicateFinder Large duplicate set. size = 1250 INFO 2026-06-08 09:00:41 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-32,087 INFO 2026-06-08 09:00:41 OpticalDuplicateFinder Large duplicate set. size = 1137 INFO 2026-06-08 09:00:41 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-18,722 INFO 2026-06-08 09:00:41 OpticalDuplicateFinder Large duplicate set. size = 1403 INFO 2026-06-08 09:00:41 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-25,704 INFO 2026-06-08 09:00:41 OpticalDuplicateFinder Large duplicate set. size = 1008 INFO 2026-06-08 09:00:41 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:3,103 INFO 2026-06-08 09:00:41 OpticalDuplicateFinder Large duplicate set. size = 1269 INFO 2026-06-08 09:00:41 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-26,456 INFO 2026-06-08 09:00:41 OpticalDuplicateFinder Large duplicate set. size = 1182 INFO 2026-06-08 09:00:41 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:8,346 INFO 2026-06-08 09:00:41 OpticalDuplicateFinder Large duplicate set. size = 1485 INFO 2026-06-08 09:00:41 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:17,884 INFO 2026-06-08 09:00:41 OpticalDuplicateFinder Large duplicate set. size = 1994 INFO 2026-06-08 09:00:41 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:14,866 INFO 2026-06-08 09:00:41 OpticalDuplicateFinder Large duplicate set. size = 1386 INFO 2026-06-08 09:00:41 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:13,952 INFO 2026-06-08 09:00:41 OpticalDuplicateFinder Large duplicate set. size = 1268 INFO 2026-06-08 09:00:41 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:13,976 INFO 2026-06-08 09:00:42 OpticalDuplicateFinder Large duplicate set. size = 1254 INFO 2026-06-08 09:00:42 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:28,401 INFO 2026-06-08 09:00:42 OpticalDuplicateFinder Large duplicate set. size = 1026 INFO 2026-06-08 09:00:42 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-32,216 INFO 2026-06-08 09:00:42 OpticalDuplicateFinder Large duplicate set. size = 1304 INFO 2026-06-08 09:00:42 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-27,921 INFO 2026-06-08 09:00:42 OpticalDuplicateFinder Large duplicate set. size = 1274 INFO 2026-06-08 09:00:42 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:28,150 INFO 2026-06-08 09:00:42 OpticalDuplicateFinder Large duplicate set. size = 1355 INFO 2026-06-08 09:00:42 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:26,354 INFO 2026-06-08 09:00:42 OpticalDuplicateFinder Large duplicate set. size = 1134 INFO 2026-06-08 09:00:42 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-24,612 INFO 2026-06-08 09:00:42 OpticalDuplicateFinder Large duplicate set. size = 1076 INFO 2026-06-08 09:00:42 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:7,569 INFO 2026-06-08 09:00:42 OpticalDuplicateFinder Large duplicate set. size = 1129 INFO 2026-06-08 09:00:42 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-26,343 INFO 2026-06-08 09:00:42 OpticalDuplicateFinder Large duplicate set. size = 1544 INFO 2026-06-08 09:00:42 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:25,772 INFO 2026-06-08 09:00:42 OpticalDuplicateFinder Large duplicate set. size = 1496 INFO 2026-06-08 09:00:42 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:5,765 INFO 2026-06-08 09:00:42 OpticalDuplicateFinder Large duplicate set. size = 1541 INFO 2026-06-08 09:00:42 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:22,244 INFO 2026-06-08 09:00:42 OpticalDuplicateFinder Large duplicate set. size = 1960 INFO 2026-06-08 09:00:42 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-17,096 INFO 2026-06-08 09:00:42 OpticalDuplicateFinder Large duplicate set. size = 1448 INFO 2026-06-08 09:00:42 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-20,543 INFO 2026-06-08 09:00:42 OpticalDuplicateFinder Large duplicate set. size = 2157 INFO 2026-06-08 09:00:42 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:16,784 INFO 2026-06-08 09:00:42 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:10,530 INFO 2026-06-08 09:00:42 OpticalDuplicateFinder Large duplicate set. size = 1142 INFO 2026-06-08 09:00:42 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:25,974 INFO 2026-06-08 09:00:42 OpticalDuplicateFinder Large duplicate set. size = 1851 INFO 2026-06-08 09:00:42 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-17,865 INFO 2026-06-08 09:00:42 OpticalDuplicateFinder Large duplicate set. size = 1279 INFO 2026-06-08 09:00:42 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-13,990 INFO 2026-06-08 09:00:42 OpticalDuplicateFinder Large duplicate set. size = 1080 INFO 2026-06-08 09:00:42 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:1,202 INFO 2026-06-08 09:00:42 OpticalDuplicateFinder Large duplicate set. size = 1692 INFO 2026-06-08 09:00:42 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-18,585 INFO 2026-06-08 09:00:42 OpticalDuplicateFinder Large duplicate set. size = 1127 INFO 2026-06-08 09:00:42 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:13,847 INFO 2026-06-08 09:00:42 OpticalDuplicateFinder Large duplicate set. size = 1586 INFO 2026-06-08 09:00:42 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:8,783 INFO 2026-06-08 09:00:42 OpticalDuplicateFinder Large duplicate set. size = 1555 INFO 2026-06-08 09:00:42 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:9,389 INFO 2026-06-08 09:00:42 OpticalDuplicateFinder Large duplicate set. size = 1397 INFO 2026-06-08 09:00:42 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:16,929 INFO 2026-06-08 09:00:42 OpticalDuplicateFinder Large duplicate set. size = 1057 INFO 2026-06-08 09:00:42 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-20,251 INFO 2026-06-08 09:00:42 OpticalDuplicateFinder Large duplicate set. size = 1188 INFO 2026-06-08 09:00:42 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:27,810 INFO 2026-06-08 09:00:42 OpticalDuplicateFinder Large duplicate set. size = 1144 INFO 2026-06-08 09:00:42 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:7,051 INFO 2026-06-08 09:00:42 OpticalDuplicateFinder Large duplicate set. size = 1674 INFO 2026-06-08 09:00:42 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-15,227 INFO 2026-06-08 09:00:42 OpticalDuplicateFinder Large duplicate set. size = 1265 INFO 2026-06-08 09:00:42 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:16,905 INFO 2026-06-08 09:00:42 OpticalDuplicateFinder Large duplicate set. size = 1587 INFO 2026-06-08 09:00:42 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:2,400 INFO 2026-06-08 09:00:42 OpticalDuplicateFinder Large duplicate set. size = 1475 INFO 2026-06-08 09:00:42 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-14,758 INFO 2026-06-08 09:00:42 OpticalDuplicateFinder Large duplicate set. size = 1164 INFO 2026-06-08 09:00:42 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:20,821 INFO 2026-06-08 09:00:42 OpticalDuplicateFinder Large duplicate set. size = 1320 INFO 2026-06-08 09:00:42 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:15,724 INFO 2026-06-08 09:00:42 OpticalDuplicateFinder Large duplicate set. size = 1012 INFO 2026-06-08 09:00:42 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:12,480 INFO 2026-06-08 09:00:43 OpticalDuplicateFinder Large duplicate set. size = 1061 INFO 2026-06-08 09:00:43 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:16,573 INFO 2026-06-08 09:00:43 OpticalDuplicateFinder Large duplicate set. size = 1082 INFO 2026-06-08 09:00:43 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:19,445 INFO 2026-06-08 09:00:43 OpticalDuplicateFinder Large duplicate set. size = 1155 INFO 2026-06-08 09:00:43 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:29,040 INFO 2026-06-08 09:00:43 OpticalDuplicateFinder Large duplicate set. size = 1076 INFO 2026-06-08 09:00:43 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:13,491 INFO 2026-06-08 09:00:43 OpticalDuplicateFinder Large duplicate set. size = 1400 INFO 2026-06-08 09:00:43 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:12,083 INFO 2026-06-08 09:00:43 OpticalDuplicateFinder Large duplicate set. size = 1657 INFO 2026-06-08 09:00:43 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:9,948 INFO 2026-06-08 09:00:43 OpticalDuplicateFinder Large duplicate set. size = 1244 INFO 2026-06-08 09:00:43 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:32,721 INFO 2026-06-08 09:00:43 OpticalDuplicateFinder Large duplicate set. size = 2017 INFO 2026-06-08 09:00:43 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:2,658 INFO 2026-06-08 09:00:43 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:20,456 INFO 2026-06-08 09:00:43 OpticalDuplicateFinder Large duplicate set. size = 1116 INFO 2026-06-08 09:00:43 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-31,788 INFO 2026-06-08 09:00:43 OpticalDuplicateFinder Large duplicate set. size = 1113 INFO 2026-06-08 09:00:43 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:14,971 INFO 2026-06-08 09:00:43 OpticalDuplicateFinder Large duplicate set. size = 1300 INFO 2026-06-08 09:00:43 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:16,484 INFO 2026-06-08 09:00:43 OpticalDuplicateFinder Large duplicate set. size = 1306 INFO 2026-06-08 09:00:43 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-24,361 INFO 2026-06-08 09:00:43 OpticalDuplicateFinder Large duplicate set. size = 1922 INFO 2026-06-08 09:00:43 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-24,037 INFO 2026-06-08 09:00:43 OpticalDuplicateFinder Large duplicate set. size = 1218 INFO 2026-06-08 09:00:43 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-14,443 INFO 2026-06-08 09:00:43 OpticalDuplicateFinder Large duplicate set. size = 1167 INFO 2026-06-08 09:00:43 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-18,633 INFO 2026-06-08 09:00:43 OpticalDuplicateFinder Large duplicate set. size = 1161 INFO 2026-06-08 09:00:43 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:16,339 INFO 2026-06-08 09:00:43 OpticalDuplicateFinder Large duplicate set. size = 1206 INFO 2026-06-08 09:00:43 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:2,877 INFO 2026-06-08 09:00:43 OpticalDuplicateFinder Large duplicate set. size = 1084 INFO 2026-06-08 09:00:43 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:24,639 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder Large duplicate set. size = 1066 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-20,357 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder Large duplicate set. size = 1413 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-21,044 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder Large duplicate set. size = 1504 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-19,507 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder Large duplicate set. size = 1932 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:23,636 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder Large duplicate set. size = 1023 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:11,064 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder Large duplicate set. size = 1184 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:27,155 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder Large duplicate set. size = 1513 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:21,379 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder Large duplicate set. size = 1924 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-16,595 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder Large duplicate set. size = 1049 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:17,738 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder Large duplicate set. size = 1033 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-23,900 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder Large duplicate set. size = 1143 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:23,951 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder Large duplicate set. size = 1094 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-14,580 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder Large duplicate set. size = 1289 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-15,090 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder Large duplicate set. size = 1034 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-23,851 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder Large duplicate set. size = 3317 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-18,601 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:31,451 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder compared 3,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-22,646 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder Large duplicate set. size = 1084 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:20,416 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder Large duplicate set. size = 1596 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:11,331 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder Large duplicate set. size = 1001 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-25,947 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder Large duplicate set. size = 1098 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-20,462 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder Large duplicate set. size = 2715 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:22,074 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:29,380 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder Large duplicate set. size = 2369 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:21,063 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:15,853 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder Large duplicate set. size = 1237 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:10,109 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder Large duplicate set. size = 1477 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:5,822 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder Large duplicate set. size = 2880 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:2,400 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:5,668 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder Large duplicate set. size = 2515 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:11,808 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-26,651 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder Large duplicate set. size = 2687 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:26,920 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:8,928 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder Large duplicate set. size = 1896 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:24,461 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder Large duplicate set. size = 1998 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:12,852 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder Large duplicate set. size = 4001 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:21,565 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-17,331 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder compared 3,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:14,599 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder compared 4,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:17,512 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder Large duplicate set. size = 1362 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:15,505 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder Large duplicate set. size = 1443 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-20,753 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder Large duplicate set. size = 1386 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-14,232 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder Large duplicate set. size = 1530 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-14,289 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder Large duplicate set. size = 2668 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:10,206 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:28,733 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder Large duplicate set. size = 1700 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:30,609 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder Large duplicate set. size = 5081 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:16,978 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:20,853 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder compared 3,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:14,397 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder compared 4,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:23,976 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder compared 5,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-17,274 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder Large duplicate set. size = 1846 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-16,789 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder Large duplicate set. size = 1065 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:30,795 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder Large duplicate set. size = 2119 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:10,837 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:31,426 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder Large duplicate set. size = 1267 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:26,289 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder Large duplicate set. size = 2018 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-24,709 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-14,710 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder Large duplicate set. size = 1153 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:15,619 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder Large duplicate set. size = 2362 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-16,959 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:5,676 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder Large duplicate set. size = 1294 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-16,093 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder Large duplicate set. size = 1113 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:9,187 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder Large duplicate set. size = 1113 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:32,745 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder Large duplicate set. size = 1048 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-31,933 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder Large duplicate set. size = 1230 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:20,715 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder Large duplicate set. size = 1828 INFO 2026-06-08 09:00:44 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:30,561 INFO 2026-06-08 09:01:00 OpticalDuplicateFinder Large duplicate set. size = 1175 INFO 2026-06-08 09:01:00 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:16,371 INFO 2026-06-08 09:01:00 OpticalDuplicateFinder Large duplicate set. size = 1333 INFO 2026-06-08 09:01:00 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-21,246 INFO 2026-06-08 09:01:00 OpticalDuplicateFinder Large duplicate set. size = 2075 INFO 2026-06-08 09:01:00 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-21,198 INFO 2026-06-08 09:01:00 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-31,683 INFO 2026-06-08 09:01:00 OpticalDuplicateFinder Large duplicate set. size = 2545 INFO 2026-06-08 09:01:00 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:12,407 INFO 2026-06-08 09:01:00 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-28,794 INFO 2026-06-08 09:01:00 OpticalDuplicateFinder Large duplicate set. size = 1261 INFO 2026-06-08 09:01:00 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-15,818 INFO 2026-06-08 09:01:00 OpticalDuplicateFinder Large duplicate set. size = 1038 INFO 2026-06-08 09:01:00 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:12,261 INFO 2026-06-08 09:01:00 OpticalDuplicateFinder Large duplicate set. size = 1444 INFO 2026-06-08 09:01:00 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-24,191 INFO 2026-06-08 09:01:00 OpticalDuplicateFinder Large duplicate set. size = 1172 INFO 2026-06-08 09:01:00 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:7,990 INFO 2026-06-08 09:01:00 OpticalDuplicateFinder Large duplicate set. size = 1932 INFO 2026-06-08 09:01:00 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:24,218 INFO 2026-06-08 09:01:00 OpticalDuplicateFinder Large duplicate set. size = 2823 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:10,142 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-30,477 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder Large duplicate set. size = 3673 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:13,839 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-16,991 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder compared 3,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:3,621 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder Large duplicate set. size = 1772 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-26,756 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder Large duplicate set. size = 1032 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-22,606 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder Large duplicate set. size = 1274 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:2,934 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder Large duplicate set. size = 2773 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:21,209 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:16,703 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder Large duplicate set. size = 1156 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:12,229 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder Large duplicate set. size = 1200 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:21,193 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder Large duplicate set. size = 3238 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-14,346 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:17,868 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder compared 3,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:2,173 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder Large duplicate set. size = 1338 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:20,165 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder Large duplicate set. size = 1889 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:9,923 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder Large duplicate set. size = 1304 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:9,001 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder Large duplicate set. size = 1089 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-23,188 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder Large duplicate set. size = 1556 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-13,440 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder Large duplicate set. size = 2410 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:28,288 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:6,356 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder Large duplicate set. size = 1146 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-14,750 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder Large duplicate set. size = 2752 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:26,888 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-23,277 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder Large duplicate set. size = 1176 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:1,663 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder Large duplicate set. size = 2301 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-21,772 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:21,662 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder Large duplicate set. size = 2793 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-17,048 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-17,234 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder Large duplicate set. size = 1972 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-17,363 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder Large duplicate set. size = 1015 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:8,580 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder Large duplicate set. size = 2760 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-16,182 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:4,406 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder Large duplicate set. size = 1014 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-31,488 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder Large duplicate set. size = 1214 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:14,648 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder Large duplicate set. size = 1363 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:22,163 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder Large duplicate set. size = 1274 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-17,290 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder Large duplicate set. size = 1227 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:3,087 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder Large duplicate set. size = 1400 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:14,988 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder Large duplicate set. size = 1097 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:29,331 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder Large duplicate set. size = 1444 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-17,905 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder Large duplicate set. size = 1010 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-13,893 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder Large duplicate set. size = 1608 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:15,530 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder Large duplicate set. size = 1148 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-29,458 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder Large duplicate set. size = 1155 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-32,087 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder Large duplicate set. size = 1038 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-14,880 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder Large duplicate set. size = 1318 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:20,003 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder Large duplicate set. size = 1173 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-25,211 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder Large duplicate set. size = 1336 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:5,344 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder Large duplicate set. size = 1377 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-31,116 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder Large duplicate set. size = 2007 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:13,248 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-28,624 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder Large duplicate set. size = 2288 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:29,396 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:17,099 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder Large duplicate set. size = 1012 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-17,274 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder Large duplicate set. size = 2053 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-23,358 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:29,525 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder Large duplicate set. size = 2696 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:15,497 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:9,956 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder Large duplicate set. size = 2084 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:25,715 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:10,384 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder Large duplicate set. size = 2583 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:31,750 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-15,211 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder Large duplicate set. size = 1350 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-19,685 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder Large duplicate set. size = 2589 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-24,790 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-32,200 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder Large duplicate set. size = 1792 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:9,770 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder Large duplicate set. size = 1707 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-21,343 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder Large duplicate set. size = 1634 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-30,178 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder Large duplicate set. size = 2441 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:8,629 INFO 2026-06-08 09:01:01 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-24,766 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder Large duplicate set. size = 1289 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-27,799 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder Large duplicate set. size = 4138 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:30,739 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:3,985 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder compared 3,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:16,161 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder compared 4,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-30,671 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder Large duplicate set. size = 1163 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-18,439 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder Large duplicate set. size = 1728 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:10,506 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder Large duplicate set. size = 1846 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:3,395 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder Large duplicate set. size = 4387 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-21,530 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:6,946 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder compared 3,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:4,317 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder compared 4,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:16,719 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder Large duplicate set. size = 1921 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-28,099 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder Large duplicate set. size = 4088 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:4,171 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-29,482 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder compared 3,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:4,196 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder compared 4,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:18,717 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder Large duplicate set. size = 5196 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-17,201 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:23,053 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder compared 3,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:14,308 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder compared 4,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:24,380 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder compared 5,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-28,171 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder Large duplicate set. size = 1314 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:29,412 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder Large duplicate set. size = 3845 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:2,003 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:13,135 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder compared 3,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:4,301 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder Large duplicate set. size = 1774 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:16,565 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder Large duplicate set. size = 1009 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-16,943 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder Large duplicate set. size = 5043 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-23,528 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-21,198 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder compared 3,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:20,465 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder compared 4,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-29,167 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder compared 5,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:3,233 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder Large duplicate set. size = 1434 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:22,576 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder Large duplicate set. size = 1167 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-26,715 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder Large duplicate set. size = 1343 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:17,593 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder Large duplicate set. size = 1221 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:21,217 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder Large duplicate set. size = 1356 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:8,588 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder Large duplicate set. size = 1320 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:28,466 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder Large duplicate set. size = 1804 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:30,310 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder Large duplicate set. size = 1178 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-21,554 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder Large duplicate set. size = 1740 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:12,407 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder Large duplicate set. size = 1055 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:13,264 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder Large duplicate set. size = 1179 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:15,004 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder Large duplicate set. size = 1309 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:12,188 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder Large duplicate set. size = 1403 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:4,794 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder Large duplicate set. size = 1381 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-29,514 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder Large duplicate set. size = 1864 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:9,834 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder Large duplicate set. size = 1355 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:18,660 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder Large duplicate set. size = 2048 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-14,750 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:14,543 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder Large duplicate set. size = 1041 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:6,089 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder Large duplicate set. size = 1276 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:31,564 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder Large duplicate set. size = 1373 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:23,118 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder Large duplicate set. size = 2987 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:1,841 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-24,596 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder Large duplicate set. size = 1196 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:16,889 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder Large duplicate set. size = 4093 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:31,168 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:16,711 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder compared 3,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-16,991 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder compared 4,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-16,417 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder Large duplicate set. size = 1317 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-23,940 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder Large duplicate set. size = 1208 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:31,378 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder Large duplicate set. size = 1626 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:28,296 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder Large duplicate set. size = 1035 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-29,053 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder Large duplicate set. size = 2147 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-23,164 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-26,262 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder Large duplicate set. size = 1907 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-32,613 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder Large duplicate set. size = 1510 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-23,859 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder Large duplicate set. size = 1049 INFO 2026-06-08 09:01:02 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:1,801 INFO 2026-06-08 09:01:03 OpticalDuplicateFinder Large duplicate set. size = 1264 INFO 2026-06-08 09:01:03 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-19,725 INFO 2026-06-08 09:01:03 OpticalDuplicateFinder Large duplicate set. size = 1048 INFO 2026-06-08 09:01:03 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:18,369 INFO 2026-06-08 09:01:03 OpticalDuplicateFinder Large duplicate set. size = 1539 INFO 2026-06-08 09:01:03 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-19,507 INFO 2026-06-08 09:01:03 OpticalDuplicateFinder Large duplicate set. size = 1031 INFO 2026-06-08 09:01:03 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-15,260 INFO 2026-06-08 09:01:03 OpticalDuplicateFinder Large duplicate set. size = 1131 INFO 2026-06-08 09:01:03 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:10,506 INFO 2026-06-08 09:01:03 OpticalDuplicateFinder Large duplicate set. size = 2313 INFO 2026-06-08 09:01:03 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:15,182 INFO 2026-06-08 09:01:03 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:30,197 INFO 2026-06-08 09:01:03 OpticalDuplicateFinder Large duplicate set. size = 1333 INFO 2026-06-08 09:01:03 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-22,864 INFO 2026-06-08 09:01:03 OpticalDuplicateFinder Large duplicate set. size = 1228 INFO 2026-06-08 09:01:03 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:14,486 INFO 2026-06-08 09:01:03 OpticalDuplicateFinder Large duplicate set. size = 1464 INFO 2026-06-08 09:01:03 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:29,639 INFO 2026-06-08 09:01:03 OpticalDuplicateFinder Large duplicate set. size = 1422 INFO 2026-06-08 09:01:03 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:3,411 INFO 2026-06-08 09:01:03 OpticalDuplicateFinder Large duplicate set. size = 1811 INFO 2026-06-08 09:01:03 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:6,428 INFO 2026-06-08 09:01:03 OpticalDuplicateFinder Large duplicate set. size = 1015 INFO 2026-06-08 09:01:03 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-16,765 INFO 2026-06-08 09:01:03 OpticalDuplicateFinder Large duplicate set. size = 1151 INFO 2026-06-08 09:01:03 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:9,155 INFO 2026-06-08 09:01:03 OpticalDuplicateFinder Large duplicate set. size = 1630 INFO 2026-06-08 09:01:03 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:8,313 INFO 2026-06-08 09:01:03 OpticalDuplicateFinder Large duplicate set. size = 2202 INFO 2026-06-08 09:01:03 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:26,006 INFO 2026-06-08 09:01:03 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:19,041 INFO 2026-06-08 09:01:03 OpticalDuplicateFinder Large duplicate set. size = 1277 INFO 2026-06-08 09:01:03 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:32,753 INFO 2026-06-08 09:01:03 OpticalDuplicateFinder Large duplicate set. size = 1344 INFO 2026-06-08 09:01:03 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-29,976 INFO 2026-06-08 09:01:03 OpticalDuplicateFinder Large duplicate set. size = 1044 INFO 2026-06-08 09:01:03 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:5,490 INFO 2026-06-08 09:01:03 OpticalDuplicateFinder Large duplicate set. size = 2077 INFO 2026-06-08 09:01:03 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:20,392 INFO 2026-06-08 09:01:03 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:8,127 INFO 2026-06-08 09:01:03 OpticalDuplicateFinder Large duplicate set. size = 1299 INFO 2026-06-08 09:01:03 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:19,437 INFO 2026-06-08 09:01:03 OpticalDuplicateFinder Large duplicate set. size = 1244 INFO 2026-06-08 09:01:03 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:24,679 INFO 2026-06-08 09:01:03 OpticalDuplicateFinder Large duplicate set. size = 1127 INFO 2026-06-08 09:01:03 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:3,912 INFO 2026-06-08 09:01:03 OpticalDuplicateFinder Large duplicate set. size = 2157 INFO 2026-06-08 09:01:03 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-31,707 INFO 2026-06-08 09:01:03 OpticalDuplicateFinder compared 2,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:2,812 INFO 2026-06-08 09:01:03 OpticalDuplicateFinder Large duplicate set. size = 1185 INFO 2026-06-08 09:01:03 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:15,012 INFO 2026-06-08 09:01:03 OpticalDuplicateFinder Large duplicate set. size = 1503 INFO 2026-06-08 09:01:03 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-29,256 INFO 2026-06-08 09:01:03 OpticalDuplicateFinder Large duplicate set. size = 1045 INFO 2026-06-08 09:01:03 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:22,584 INFO 2026-06-08 09:01:03 OpticalDuplicateFinder Large duplicate set. size = 1057 INFO 2026-06-08 09:01:03 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:7,828 INFO 2026-06-08 09:01:04 OpticalDuplicateFinder Large duplicate set. size = 1162 INFO 2026-06-08 09:01:04 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:30,666 INFO 2026-06-08 09:01:04 OpticalDuplicateFinder Large duplicate set. size = 1526 INFO 2026-06-08 09:01:04 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-28,285 INFO 2026-06-08 09:01:04 OpticalDuplicateFinder Large duplicate set. size = 1086 INFO 2026-06-08 09:01:04 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:17,002 INFO 2026-06-08 09:01:04 OpticalDuplicateFinder Large duplicate set. size = 1036 INFO 2026-06-08 09:01:04 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:12,674 INFO 2026-06-08 09:01:04 OpticalDuplicateFinder Large duplicate set. size = 1559 INFO 2026-06-08 09:01:04 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:26,386 INFO 2026-06-08 09:01:04 OpticalDuplicateFinder Large duplicate set. size = 1200 INFO 2026-06-08 09:01:04 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-24,167 INFO 2026-06-08 09:01:04 OpticalDuplicateFinder Large duplicate set. size = 1950 INFO 2026-06-08 09:01:04 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-30,615 INFO 2026-06-08 09:01:04 OpticalDuplicateFinder Large duplicate set. size = 1068 INFO 2026-06-08 09:01:04 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:3,265 INFO 2026-06-08 09:01:04 OpticalDuplicateFinder Large duplicate set. size = 1045 INFO 2026-06-08 09:01:04 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:2,205 INFO 2026-06-08 09:01:04 OpticalDuplicateFinder Large duplicate set. size = 1180 INFO 2026-06-08 09:01:04 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-25,647 INFO 2026-06-08 09:01:04 OpticalDuplicateFinder Large duplicate set. size = 1237 INFO 2026-06-08 09:01:04 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:13,386 INFO 2026-06-08 09:01:04 OpticalDuplicateFinder Large duplicate set. size = 1113 INFO 2026-06-08 09:01:04 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:-28,374 INFO 2026-06-08 09:01:04 OpticalDuplicateFinder Large duplicate set. size = 1257 INFO 2026-06-08 09:01:04 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:21,338 INFO 2026-06-08 09:01:04 OpticalDuplicateFinder Large duplicate set. size = 1602 INFO 2026-06-08 09:01:04 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:16,703 INFO 2026-06-08 09:01:04 OpticalDuplicateFinder Large duplicate set. size = 1329 INFO 2026-06-08 09:01:04 OpticalDuplicateFinder compared 1,000 ReadEnds to others. Elapsed time: 00:00:00s. Time for last 1,000: 0s. Last read position: 0:9,503 INFO 2026-06-08 09:01:16 MarkDuplicates Traversing fragment information and detecting duplicates. WARNING 2026-06-08 09:01:16 SortingCollection There is not enough memory per file for buffering. Reading will be unbuffered. INFO 2026-06-08 09:02:14 MarkDuplicates Sorting list of duplicate records. INFO 2026-06-08 09:02:17 MarkDuplicates After generateDuplicateIndexes freeMemory: 203792040; totalMemory: 234881024; maxMemory: 63585648640 INFO 2026-06-08 09:02:17 MarkDuplicates Marking 324848142 records as duplicates. INFO 2026-06-08 09:02:17 MarkDuplicates Found 28102574 optical duplicate clusters. INFO 2026-06-08 09:02:17 MarkDuplicates Reads are assumed to be ordered by: coordinate INFO 2026-06-08 09:02:33 MarkDuplicates Written 10,000,000 records. Elapsed time: 00:00:16s. Time for last 10,000,000: 16s. Last read position: chr1:27,364,266 INFO 2026-06-08 09:02:49 MarkDuplicates Written 20,000,000 records. Elapsed time: 00:00:31s. Time for last 10,000,000: 15s. Last read position: chr1:46,716,317 INFO 2026-06-08 09:03:04 MarkDuplicates Written 30,000,000 records. Elapsed time: 00:00:46s. Time for last 10,000,000: 15s. Last read position: chr1:116,616,360 INFO 2026-06-08 09:03:19 MarkDuplicates Written 40,000,000 records. Elapsed time: 00:01:02s. Time for last 10,000,000: 15s. Last read position: chr1:155,062,265 INFO 2026-06-08 09:03:35 MarkDuplicates Written 50,000,000 records. Elapsed time: 00:01:17s. Time for last 10,000,000: 15s. Last read position: chr1:186,341,084 INFO 2026-06-08 09:03:51 MarkDuplicates Written 60,000,000 records. Elapsed time: 00:01:33s. Time for last 10,000,000: 15s. Last read position: chr1:241,633,816 INFO 2026-06-08 09:04:06 MarkDuplicates Written 70,000,000 records. Elapsed time: 00:01:48s. Time for last 10,000,000: 14s. Last read position: chr2:32,916,406 INFO 2026-06-08 09:04:21 MarkDuplicates Written 80,000,000 records. Elapsed time: 00:02:03s. Time for last 10,000,000: 15s. Last read position: chr2:108,496,987 INFO 2026-06-08 09:04:36 MarkDuplicates Written 90,000,000 records. Elapsed time: 00:02:19s. Time for last 10,000,000: 15s. Last read position: chr2:189,010,791 INFO 2026-06-08 09:04:52 MarkDuplicates Written 100,000,000 records. Elapsed time: 00:02:34s. Time for last 10,000,000: 15s. Last read position: chr2:215,375,270 INFO 2026-06-08 09:05:07 MarkDuplicates Written 110,000,000 records. Elapsed time: 00:02:49s. Time for last 10,000,000: 14s. Last read position: chr2:215,397,744 INFO 2026-06-08 09:05:22 MarkDuplicates Written 120,000,000 records. Elapsed time: 00:03:04s. Time for last 10,000,000: 14s. Last read position: chr2:215,428,319 INFO 2026-06-08 09:05:38 MarkDuplicates Written 130,000,000 records. Elapsed time: 00:03:20s. Time for last 10,000,000: 15s. Last read position: chr3:12,618,560 INFO 2026-06-08 09:05:53 MarkDuplicates Written 140,000,000 records. Elapsed time: 00:03:36s. Time for last 10,000,000: 15s. Last read position: chr3:52,488,122 INFO 2026-06-08 09:06:09 MarkDuplicates Written 150,000,000 records. Elapsed time: 00:03:51s. Time for last 10,000,000: 15s. Last read position: chr3:142,689,805 INFO 2026-06-08 09:06:26 MarkDuplicates Written 160,000,000 records. Elapsed time: 00:04:08s. Time for last 10,000,000: 16s. Last read position: chr4:26,430,716 INFO 2026-06-08 09:06:42 MarkDuplicates Written 170,000,000 records. Elapsed time: 00:04:25s. Time for last 10,000,000: 16s. Last read position: chr4:183,322,077 INFO 2026-06-08 09:06:58 MarkDuplicates Written 180,000,000 records. Elapsed time: 00:04:40s. Time for last 10,000,000: 15s. Last read position: chr5:83,537,762 INFO 2026-06-08 09:07:13 MarkDuplicates Written 190,000,000 records. Elapsed time: 00:04:55s. Time for last 10,000,000: 15s. Last read position: chr5:151,664,125 INFO 2026-06-08 09:07:28 MarkDuplicates Written 200,000,000 records. Elapsed time: 00:05:10s. Time for last 10,000,000: 15s. Last read position: chr6:30,685,843 INFO 2026-06-08 09:07:43 MarkDuplicates Written 210,000,000 records. Elapsed time: 00:05:26s. Time for last 10,000,000: 15s. Last read position: chr6:43,516,747 INFO 2026-06-08 09:07:59 MarkDuplicates Written 220,000,000 records. Elapsed time: 00:05:41s. Time for last 10,000,000: 15s. Last read position: chr6:149,683,443 INFO 2026-06-08 09:08:14 MarkDuplicates Written 230,000,000 records. Elapsed time: 00:05:56s. Time for last 10,000,000: 15s. Last read position: chr7:35,832,888 INFO 2026-06-08 09:08:29 MarkDuplicates Written 240,000,000 records. Elapsed time: 00:06:11s. Time for last 10,000,000: 15s. Last read position: chr7:94,416,458 INFO 2026-06-08 09:08:44 MarkDuplicates Written 250,000,000 records. Elapsed time: 00:06:26s. Time for last 10,000,000: 15s. Last read position: chr7:139,716,873 INFO 2026-06-08 09:08:59 MarkDuplicates Written 260,000,000 records. Elapsed time: 00:06:42s. Time for last 10,000,000: 15s. Last read position: chr8:52,642,434 INFO 2026-06-08 09:09:14 MarkDuplicates Written 270,000,000 records. Elapsed time: 00:06:57s. Time for last 10,000,000: 15s. Last read position: chr8:108,239,992 INFO 2026-06-08 09:09:29 MarkDuplicates Written 280,000,000 records. Elapsed time: 00:07:11s. Time for last 10,000,000: 14s. Last read position: chr8:143,860,723 INFO 2026-06-08 09:09:44 MarkDuplicates Written 290,000,000 records. Elapsed time: 00:07:26s. Time for last 10,000,000: 14s. Last read position: chr8:144,436,844 INFO 2026-06-08 09:10:00 MarkDuplicates Written 300,000,000 records. Elapsed time: 00:07:42s. Time for last 10,000,000: 16s. Last read position: chr9:114,093,377 INFO 2026-06-08 09:10:15 MarkDuplicates Written 310,000,000 records. Elapsed time: 00:07:57s. Time for last 10,000,000: 15s. Last read position: chr9:137,040,376 INFO 2026-06-08 09:10:30 MarkDuplicates Written 320,000,000 records. Elapsed time: 00:08:13s. Time for last 10,000,000: 15s. Last read position: chr10:63,343,745 INFO 2026-06-08 09:10:47 MarkDuplicates Written 330,000,000 records. Elapsed time: 00:08:29s. Time for last 10,000,000: 16s. Last read position: chr10:119,651,762 INFO 2026-06-08 09:11:02 MarkDuplicates Written 340,000,000 records. Elapsed time: 00:08:44s. Time for last 10,000,000: 15s. Last read position: chr11:1,245,276 INFO 2026-06-08 09:11:17 MarkDuplicates Written 350,000,000 records. Elapsed time: 00:09:00s. Time for last 10,000,000: 15s. Last read position: chr11:33,706,458 INFO 2026-06-08 09:11:34 MarkDuplicates Written 360,000,000 records. Elapsed time: 00:09:17s. Time for last 10,000,000: 17s. Last read position: chr11:62,786,274 INFO 2026-06-08 09:11:51 MarkDuplicates Written 370,000,000 records. Elapsed time: 00:09:33s. Time for last 10,000,000: 16s. Last read position: chr11:95,836,207 INFO 2026-06-08 09:12:08 MarkDuplicates Written 380,000,000 records. Elapsed time: 00:09:50s. Time for last 10,000,000: 16s. Last read position: chr12:6,867,590 INFO 2026-06-08 09:12:25 MarkDuplicates Written 390,000,000 records. Elapsed time: 00:10:08s. Time for last 10,000,000: 17s. Last read position: chr12:54,282,462 INFO 2026-06-08 09:12:42 MarkDuplicates Written 400,000,000 records. Elapsed time: 00:10:24s. Time for last 10,000,000: 16s. Last read position: chr12:105,121,122 INFO 2026-06-08 09:12:59 MarkDuplicates Written 410,000,000 records. Elapsed time: 00:10:41s. Time for last 10,000,000: 16s. Last read position: chr13:20,002,956 INFO 2026-06-08 09:13:16 MarkDuplicates Written 420,000,000 records. Elapsed time: 00:10:59s. Time for last 10,000,000: 17s. Last read position: chr14:23,560,322 INFO 2026-06-08 09:13:32 MarkDuplicates Written 430,000,000 records. Elapsed time: 00:11:14s. Time for last 10,000,000: 15s. Last read position: chr14:88,426,591 INFO 2026-06-08 09:13:49 MarkDuplicates Written 440,000,000 records. Elapsed time: 00:11:31s. Time for last 10,000,000: 17s. Last read position: chr15:42,444,884 INFO 2026-06-08 09:14:05 MarkDuplicates Written 450,000,000 records. Elapsed time: 00:11:47s. Time for last 10,000,000: 16s. Last read position: chr15:87,074,034 INFO 2026-06-08 09:14:21 MarkDuplicates Written 460,000,000 records. Elapsed time: 00:12:03s. Time for last 10,000,000: 15s. Last read position: chr16:14,875,245 INFO 2026-06-08 09:14:37 MarkDuplicates Written 470,000,000 records. Elapsed time: 00:12:20s. Time for last 10,000,000: 16s. Last read position: chr16:29,382,296 INFO 2026-06-08 09:14:55 MarkDuplicates Written 480,000,000 records. Elapsed time: 00:12:37s. Time for last 10,000,000: 17s. Last read position: chr16:82,148,745 INFO 2026-06-08 09:15:13 MarkDuplicates Written 490,000,000 records. Elapsed time: 00:12:55s. Time for last 10,000,000: 18s. Last read position: chr17:27,752,858 INFO 2026-06-08 09:15:29 MarkDuplicates Written 500,000,000 records. Elapsed time: 00:13:11s. Time for last 10,000,000: 15s. Last read position: chr17:42,782,799 INFO 2026-06-08 09:15:45 MarkDuplicates Written 510,000,000 records. Elapsed time: 00:13:27s. Time for last 10,000,000: 15s. Last read position: chr17:50,188,568 INFO 2026-06-08 09:16:00 MarkDuplicates Written 520,000,000 records. Elapsed time: 00:13:43s. Time for last 10,000,000: 15s. Last read position: chr17:50,194,129 INFO 2026-06-08 09:16:16 MarkDuplicates Written 530,000,000 records. Elapsed time: 00:13:59s. Time for last 10,000,000: 15s. Last read position: chr17:50,199,269 INFO 2026-06-08 09:16:32 MarkDuplicates Written 540,000,000 records. Elapsed time: 00:14:14s. Time for last 10,000,000: 15s. Last read position: chr17:67,874,848 INFO 2026-06-08 09:16:47 MarkDuplicates Written 550,000,000 records. Elapsed time: 00:14:29s. Time for last 10,000,000: 15s. Last read position: chr18:49,490,477 INFO 2026-06-08 09:17:02 MarkDuplicates Written 560,000,000 records. Elapsed time: 00:14:44s. Time for last 10,000,000: 15s. Last read position: chr19:11,194,483 INFO 2026-06-08 09:17:20 MarkDuplicates Written 570,000,000 records. Elapsed time: 00:15:02s. Time for last 10,000,000: 17s. Last read position: chr19:36,973,726 INFO 2026-06-08 09:17:35 MarkDuplicates Written 580,000,000 records. Elapsed time: 00:15:17s. Time for last 10,000,000: 15s. Last read position: chr19:50,725,399 INFO 2026-06-08 09:17:50 MarkDuplicates Written 590,000,000 records. Elapsed time: 00:15:32s. Time for last 10,000,000: 15s. Last read position: chr20:36,912,437 INFO 2026-06-08 09:18:07 MarkDuplicates Written 600,000,000 records. Elapsed time: 00:15:49s. Time for last 10,000,000: 16s. Last read position: chr21:34,669,569 INFO 2026-06-08 09:18:24 MarkDuplicates Written 610,000,000 records. Elapsed time: 00:16:06s. Time for last 10,000,000: 16s. Last read position: chr22:29,299,798 INFO 2026-06-08 09:18:44 MarkDuplicates Written 620,000,000 records. Elapsed time: 00:16:27s. Time for last 10,000,000: 20s. Last read position: chrX:21,940,807 INFO 2026-06-08 09:18:59 MarkDuplicates Written 630,000,000 records. Elapsed time: 00:16:42s. Time for last 10,000,000: 15s. Last read position: chrX:153,508,326 INFO 2026-06-08 09:19:16 MarkDuplicates Writing complete. Closing input iterator. INFO 2026-06-08 09:19:16 MarkDuplicates Duplicate Index cleanup. INFO 2026-06-08 09:19:16 MarkDuplicates Getting Memory Stats. INFO 2026-06-08 09:19:16 MarkDuplicates Before output close freeMemory: 203737136; totalMemory: 234881024; maxMemory: 63585648640 INFO 2026-06-08 09:19:16 MarkDuplicates Closed outputs. Getting more Memory Stats. INFO 2026-06-08 09:19:16 MarkDuplicates After output close freeMemory: 103991280; totalMemory: 134217728; maxMemory: 63585648640 [Mon Jun 08 09:19:16 GMT 2026] picard.sam.markduplicates.MarkDuplicates done. Elapsed time: 41.14 minutes. Runtime.totalMemory()=134217728 Tool returned: 0 ls: *cram: No such file or directory ls: *.crai: No such file or directory