AIH curated blacklist: matched 10 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 353
Pass (FILTER=PASS): 41 (11.6%)
Fail (FILTER=FAIL): 312 (88.4%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 10
All 10 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 67
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 52
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 28
confidence_below_min(low<high): 22
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 21
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 20
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 18
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 17
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 10
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 8
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 8
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 8
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 7
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 4
confidence_below_min(medium<high);aih_curated_blacklist: 3
Breakdown by confidence:
high: 41 pass, 10 fail (total: 51)
low: 0 pass, 146 fail (total: 146)
medium: 0 pass, 156 fail (total: 156)
Arriba filter: 353 rows -> 41 PASS; wrote aih-tih-sc-7c8bae-R1_B23WHYVLT4_1.arriba.fusions.filtered.tsv and aih-tih-sc-7c8bae-R1_B23WHYVLT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: aih-tih-sc-7c8bae-R1_B23WHYVLT4_1.arriba.fusions.filter_summary.txt