File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/94/50c68c5d8c03df9443eecacbafed67/.command.log
Size
1.1 KB
Attempt
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/94/50c68c5d8c03df9443eecacbafed67/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/10/3803b5f992ed0a7ca117d3acad7e40/aih-tih-sc-0183f6-R1_B23WHYVLT4_1
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/94/50c68c5d8c03df9443eecacbafed67/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/07/22200788e2be91f76ca7f6dccb6db8/aih-tih-sc-0183f6-R1_B23WHYVLT4_1.sample_qc.tsv
==> STAGING COMPLETE (4 inputs)

Processing Kallisto file: aih-tih-sc-0183f6-R1_B23WHYVLT4_1/abundance.h5
Successfully converted aih-tih-sc-0183f6-R1_B23WHYVLT4_1/abundance.h5 to aih-tih-sc-0183f6-R1_B23WHYVLT4_1_kallisto_mqc.tsv
  Sample: aih-tih-sc-0183f6-R1_B23WHYVLT4_1
  Mean Fragment Length: 110.9 bp
  Median Fragment Length: 106.0 bp
  pct_mito_est_counts: 0.057%
  pct_ribo_est_counts: 1.235%
  pct_hk_est_counts: 0.416%
  pct_male_est_counts: 0.0%
  pct_mito_tpm: 0.119%
  pct_ribo_tpm: 3.672%
  pct_hk_tpm: 0.643%
  pct_male_tpm: 0.0%
  score_log2tpm1_mean_chry_signature: 0.024%