AIH curated blacklist: matched 6 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 186
Pass (FILTER=PASS): 20 (10.8%)
Fail (FILTER=FAIL): 166 (89.2%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 6
All 6 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 61
confidence_below_min(low<high): 31
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 20
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 12
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 10
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 10
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 4
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 4
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 4
confidence_below_min(medium<high);aih_curated_blacklist: 3
total_reads_below_min(4.0<8.0): 1
total_reads_below_min(4.0<8.0);aih_curated_blacklist: 1
total_reads_below_min(3.0<8.0): 1
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 1
confidence_below_min(low<high);aih_curated_blacklist: 1
Breakdown by confidence:
high: 20 pass, 3 fail (total: 23)
low: 0 pass, 88 fail (total: 88)
medium: 0 pass, 75 fail (total: 75)
Arriba filter: 186 rows -> 20 PASS; wrote aih-tih-sc-0fc41c-R1_B23WHYVLT4_1.arriba.fusions.filtered.tsv and aih-tih-sc-0fc41c-R1_B23WHYVLT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: aih-tih-sc-0fc41c-R1_B23WHYVLT4_1.arriba.fusions.filter_summary.txt