AIH curated blacklist: matched 13 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 266
Pass (FILTER=PASS): 40 (15.0%)
Fail (FILTER=FAIL): 226 (85.0%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 13
All 13 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 75
confidence_below_min(low<high): 33
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 22
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 21
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 12
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 9
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 7
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 7
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 7
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 6
confidence_below_min(medium<high);aih_curated_blacklist: 5
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 4
confidence_below_min(low<high);total_reads_below_min(7.0<8.0): 4
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0);aih_curated_blacklist: 4
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 2
Breakdown by confidence:
high: 40 pass, 3 fail (total: 43)
low: 0 pass, 118 fail (total: 118)
medium: 0 pass, 105 fail (total: 105)
Arriba filter: 266 rows -> 40 PASS; wrote aih-tih-sc-63b0e7-R1_B23WHYVLT4_1.arriba.fusions.filtered.tsv and aih-tih-sc-63b0e7-R1_B23WHYVLT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: aih-tih-sc-63b0e7-R1_B23WHYVLT4_1.arriba.fusions.filter_summary.txt