Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/06/70a39b42ffcc4aba4493384540a272/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/06/70a39b42ffcc4aba4493384540a272/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e5/c3a872b13b04e87d8c489ba26c2dca/aih-tih-sc-1d9134-R1_B23WHYVLT4_1.Aligned.sortedByCoord.out.bam.bai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e3/c9d89dceb8ea0fc52bb470c68ae975/aih-tih-sc-1d9134-R1_B23WHYVLT4_1.Aligned.sortedByCoord.out.bam
==> STAGING COMPLETE (4 inputs)

[W::hts_idx_load3] The index file is older than the data file: aih-tih-sc-1d9134-R1_B23WHYVLT4_1.Aligned.sortedByCoord.out.bam.bai
Load BAM file ...  Done
report duplicte rate based on sequence ...
report duplicte rate based on mapping  ...
generate R script ...
null device 
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