Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f7/cf65952d898fe434668cf988d72da1/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4e/ffd79a928055941e334b80b2b6d101/aih-tih-sc-1ba302-R1_B23WHYVLT4_1.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f7/cf65952d898fe434668cf988d72da1/.command.run
==> STAGING COMPLETE (3 inputs)

PAIRED_END_BAM_INPUT
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paired = 292351184
unpaired = 5159805
MERGED PAIRED END READS = 292351184
MATES PROCESSED = 589862173
TOTAL READS     = 297510989
DISTINCT READS  = 1.28881e+08
DISTINCT COUNTS = 1768
MAX COUNT       = 1252306
COUNTS OF 1     = 7.02686e+07
MAX TERMS       = 100
OBSERVED COUNTS (1252307)
1	70268621
2	29307070
3	13158309
4	6343326
5	3309844
6	1876257
7	1140711
8	742330
9	508387
10	365918
11	272131
12	210309
13	166424
14	133932
15	110042
16	91633
17	77564
18	66468
19	57558
20	49934
21	43922
22	38763
23	34378
24	31175
25	27726
26	24972
27	22688
28	20755
29	18932
30	17327
31	15990
32	14880
33	13715
34	12691
35	11805
36	10939
37	10226
38	9604
39	8933
40	8520
41	7957
42	7502
43	7040
44	6708
45	6187
46	5951
47	5564
48	5341
49	5082
50	4902
51	4651
52	4408
53	4226
54	4156
55	3718
56	3735
57	3437
58	3436
59	3220
60	3086
61	2946
62	2880
63	2734
64	2620
65	2602
66	2460
67	2406
68	2354
69	2243
70	2156
71	2113
72	1924
73	1913
74	1864
75	1713
76	1715
77	1714
78	1653
79	1538
80	1497
81	1508
82	1465
83	1410
84	1314
85	1272
86	1355
87	1230
88	1225
89	1182
90	1130
91	1113
92	1048
93	1002
94	1061
95	1034
96	985
97	959
98	962
99	940
100	914
101	872
102	845
103	882
104	784
105	778
106	817
107	739
108	726
109	744
110	716
111	674
112	675
113	691
114	645
115	718
116	633
117	600
118	590
119	595
120	567
121	598
122	557
123	544
124	512
125	568
126	507
127	503
128	503
129	493
130	502
131	463
132	476
133	459
134	444
135	435
136	446
137	394
138	411
139	401
140	400
141	367
142	438
143	425
144	397
145	335
146	373
147	347
148	333
149	327
150	352
151	326
152	327
153	324
154	302
155	306
156	324
157	290
158	298
159	284
160	302
161	278
162	267
163	261
164	261
165	260
166	250
167	256
168	228
169	250
170	221
171	229
172	235
173	248
174	239
175	201
176	228
177	215
178	200
179	217
180	225
181	211
182	207
183	207
184	220
185	210
186	188
187	224
188	167
189	188
190	201
191	184
192	186
193	187
194	181
195	173
196	170
197	157
198	152
199	168
200	154
201	184
202	161
203	154
204	158
205	164
206	151
207	142
208	145
209	158
210	156
211	158
212	121
213	152
214	134
215	149
216	134
217	143
218	147
219	112
220	126
221	129
222	123
223	136
224	108
225	114
226	128
227	110
228	127
229	116
230	106
231	118
232	127
233	113
234	114
235	118
236	107
237	92
238	108
239	87
240	109
241	96
242	113
243	103
244	97
245	101
246	89
247	105
248	106
249	78
250	110
251	85
252	87
253	85
254	77
255	97
256	103
257	98
258	67
259	89
260	90
261	83
262	71
263	94
264	88
265	88
266	62
267	63
268	86
269	70
270	67
271	79
272	61
273	65
274	74
275	80
276	78
277	63
278	90
279	73
280	50
281	69
282	74
283	57
284	77
285	58
286	66
287	73
288	58
289	70
290	58
291	61
292	72
293	58
294	53
295	51
296	70
297	66
298	59
299	59
300	64
301	68
302	50
303	55
304	41
305	57
306	52
307	58
308	55
309	60
310	63
311	54
312	54
313	51
314	59
315	44
316	61
317	50
318	53
319	43
320	48
321	59
322	47
323	51
324	49
325	42
326	51
327	37
328	49
329	55
330	51
331	41
332	42
333	43
334	51
335	35
336	46
337	42
338	37
339	47
340	44
341	48
342	46
343	33
344	42
345	35
346	45
347	61
348	46
349	38
350	32
351	43
352	43
353	46
354	38
355	36
356	31
357	24
358	43
359	39
360	33
361	37
362	40
363	38
364	29
365	37
366	28
367	33
368	27
369	29
370	25
371	33
372	23
373	29
374	36
375	31
376	29
377	43
378	28
379	34
380	24
381	27
382	30
383	30
384	27
385	44
386	36
387	28
388	19
389	29
390	41
391	35
392	28
393	34
394	37
395	30
396	27
397	31
398	22
399	29
400	26
401	29
402	26
403	33
404	34
405	27
406	22
407	28
408	17
409	32
410	31
411	22
412	28
413	24
414	32
415	25
416	17
417	27
418	24
419	24
420	26
421	25
422	26
423	26
424	25
425	27
426	19
427	22
428	27
429	20
430	26
431	21
432	20
433	14
434	26
435	23
436	25
437	17
438	23
439	26
440	18
441	20
442	21
443	24
444	23
445	26
446	25
447	18
448	16
449	30
450	23
451	15
452	13
453	23
454	18
455	24
456	23
457	16
458	12
459	24
460	23
461	20
462	26
463	18
464	15
465	16
466	17
467	22
468	23
469	19
470	18
471	19
472	20
473	19
474	11
475	19
476	13
477	20
478	18
479	15
480	15
481	19
482	17
483	22
484	19
485	10
486	14
487	17
488	23
489	14
490	16
491	18
492	12
493	8
494	21
495	22
496	14
497	27
498	13
499	15
500	13
501	11
502	12
503	11
504	16
505	18
506	16
507	7
508	15
509	11
510	22
511	14
512	17
513	10
514	15
515	14
516	23
517	23
518	11
519	19
520	9
521	20
522	11
523	12
524	19
525	15
526	10
527	9
528	18
529	17
530	13
531	13
532	7
533	18
534	14
535	8
536	18
537	16
538	7
539	13
540	11
541	16
542	16
543	12
544	17
545	15
546	16
547	16
548	19
549	21
550	13
551	15
552	17
553	16
554	10
555	15
556	15
557	13
558	11
559	8
560	10
561	15
562	6
563	10
564	14
565	11
566	13
567	6
568	10
569	10
570	14
571	15
572	10
573	12
574	12
575	12
576	10
577	10
578	13
579	11
580	11
581	11
582	10
583	13
584	15
585	8
586	12
587	9
588	9
589	8
590	10
591	12
592	7
593	9
594	13
595	11
596	12
597	9
598	9
599	17
600	10
601	10
602	9
603	13
604	7
605	14
606	10
607	5
608	11
609	6
610	11
611	7
612	10
613	10
614	10
615	10
616	8
617	11
618	8
619	6
620	7
621	11
622	6
623	11
624	10
625	9
626	5
627	7
628	8
629	11
630	10
631	3
632	8
633	8
634	14
635	7
636	8
637	9
638	17
639	6
640	10
641	3
642	10
643	11
644	10
645	10
646	13
647	9
648	8
649	8
650	6
651	7
652	7
653	7
654	10
655	6
656	4
657	5
658	9
659	4
660	6
661	8
662	11
663	3
664	8
665	12
666	8
667	6
668	10
669	5
670	8
671	5
672	6
673	10
674	1
675	6
676	8
677	5
678	10
679	4
680	7
681	7
682	3
683	7
684	7
685	9
686	7
687	9
688	5
689	2
690	5
691	10
692	4
693	5
694	8
695	5
696	7
697	7
698	8
699	5
700	8
701	9
702	5
703	8
704	4
705	6
706	5
707	9
708	5
709	6
710	2
711	6
712	6
713	6
714	6
715	8
716	6
717	4
718	3
719	7
720	12
721	5
722	4
723	4
724	6
725	4
726	8
727	2
728	2
729	8
730	7
731	6
732	5
733	5
734	4
735	9
736	5
737	11
738	3
739	4
740	4
741	4
742	10
743	6
744	1
745	8
746	5
747	4
748	9
749	6
750	4
751	5
752	7
753	3
754	3
755	2
756	7
757	1
758	2
759	6
760	4
761	10
762	6
763	6
764	8
765	3
766	9
767	2
768	2
769	3
770	7
771	4
772	5
773	3
774	8
775	6
776	3
777	4
778	2
779	5
780	4
781	5
782	5
783	2
784	7
785	7
786	3
787	3
788	4
789	5
790	4
791	2
792	2
793	4
794	3
795	6
796	3
797	5
798	4
799	3
800	2
801	3
802	5
803	1
804	6
805	9
806	5
807	6
808	4
809	7
810	4
811	3
812	4
813	8
814	5
815	2
816	3
817	3
818	3
819	6
820	7
821	6
822	1
823	1
824	4
825	4
826	7
827	4
828	4
829	6
830	4
831	2
832	4
833	5
834	3
835	4
836	2
837	8
838	6
839	4
840	4
841	2
842	4
843	7
844	1
845	6
846	4
847	1
848	4
849	2
850	9
851	7
852	4
853	3
854	6
855	5
856	4
857	3
858	2
859	3
860	4
861	4
862	3
863	2
864	6
865	4
866	7
867	7
868	3
869	6
870	4
871	3
872	2
873	5
874	5
875	2
876	5
877	4
878	2
879	3
880	1
881	2
882	1
883	4
884	2
886	5
887	3
888	4
889	2
890	1
892	6
893	2
894	4
895	6
896	2
897	3
898	2
900	3
901	5
902	1
903	5
904	4
905	5
906	3
907	3
908	7
909	3
910	2
911	1
912	5
913	1
914	1
915	3
916	1
917	1
919	4
920	1
921	3
922	5
923	3
925	1
926	2
927	2
928	4
929	1
931	6
933	4
935	5
936	1
937	4
938	4
939	3
940	3
941	2
942	5
943	2
944	3
945	5
946	3
947	1
948	3
949	2
950	1
951	3
952	5
953	4
954	6
955	3
956	2
957	1
958	2
959	5
960	2
961	2
962	5
963	5
964	3
965	2
966	4
967	3
968	6
969	3
970	2
971	1
972	2
973	4
974	1
975	1
976	1
977	4
978	2
979	2
980	7
981	2
982	1
983	2
984	3
985	1
986	1
988	2
989	2
990	1
991	2
992	2
993	6
994	4
995	6
996	2
997	1
998	1
1000	1
1001	1
1002	3
1003	5
1004	3
1005	3
1006	2
1007	5
1008	1
1009	2
1010	1
1011	4
1012	3
1013	3
1014	1
1015	3
1016	4
1017	5
1018	1
1019	1
1020	1
1023	6
1024	1
1025	2
1028	6
1029	3
1030	1
1031	2
1032	3
1033	2
1034	2
1035	2
1037	1
1038	1
1039	5
1040	1
1042	2
1043	2
1044	1
1045	1
1046	1
1048	3
1049	2
1050	3
1051	4
1053	1
1054	2
1055	2
1057	2
1058	2
1060	1
1061	2
1062	2
1063	3
1064	3
1065	4
1067	2
1069	1
1070	2
1072	2
1073	3
1075	3
1077	1
1078	1
1079	4
1081	1
1082	2
1083	1
1084	3
1085	2
1087	3
1088	3
1089	3
1090	1
1091	1
1092	1
1093	1
1094	1
1095	3
1097	6
1098	3
1099	1
1100	3
1101	1
1102	1
1103	3
1105	2
1106	1
1107	1
1108	1
1109	2
1111	1
1113	4
1114	1
1115	2
1116	5
1117	1
1118	1
1119	1
1121	1
1122	1
1123	3
1124	3
1125	2
1126	2
1127	1
1128	1
1131	3
1132	2
1133	1
1134	3
1135	4
1136	1
1137	3
1138	2
1139	1
1141	2
1142	2
1143	3
1144	1
1145	2
1146	1
1147	1
1148	1
1149	3
1150	1
1151	2
1152	2
1153	2
1154	3
1156	1
1158	2
1161	2
1163	3
1164	1
1165	2
1166	1
1167	2
1168	2
1170	2
1171	1
1172	1
1173	1
1174	2
1175	1
1176	3
1177	1
1178	1
1179	4
1180	3
1184	3
1185	3
1186	1
1188	1
1189	1
1191	6
1193	3
1194	1
1195	1
1196	1
1198	1
1199	3
1200	1
1203	4
1205	1
1207	2
1209	1
1210	3
1212	1
1213	2
1214	1
1215	2
1217	1
1220	2
1222	2
1223	4
1224	1
1225	2
1227	2
1228	1
1229	1
1230	2
1231	2
1233	3
1234	1
1235	2
1236	3
1237	2
1239	3
1241	1
1242	2
1243	2
1244	1
1245	3
1246	3
1249	5
1252	1
1253	3
1254	1
1255	4
1257	2
1260	1
1262	2
1263	2
1266	1
1267	1
1268	1
1269	1
1270	3
1271	1
1272	2
1274	3
1276	1
1277	3
1278	1
1279	1
1280	2
1281	1
1282	1
1284	1
1287	1
1288	1
1289	2
1291	2
1292	1
1293	2
1294	1
1297	5
1299	2
1300	1
1302	3
1303	2
1304	1
1305	3
1306	4
1308	1
1309	1
1310	3
1311	2
1313	3
1314	1
1315	1
1316	1
1317	1
1318	3
1319	1
1320	1
1322	2
1325	2
1326	1
1327	1
1328	1
1332	2
1333	1
1335	2
1337	1
1338	1
1341	2
1342	3
1344	1
1345	1
1347	1
1348	1
1349	1
1350	1
1351	1
1353	2
1354	1
1355	1
1358	1
1360	1
1361	1
1362	4
1364	3
1365	1
1366	3
1367	1
1368	1
1370	1
1372	1
1373	3
1374	2
1377	2
1378	1
1380	2
1381	1
1382	2
1383	3
1386	1
1389	1
1390	2
1392	1
1393	2
1394	1
1395	1
1397	1
1399	1
1400	1
1401	1
1403	1
1404	1
1405	2
1407	1
1412	1
1413	2
1414	4
1415	1
1416	1
1417	1
1420	1
1421	2
1423	1
1424	1
1425	2
1426	3
1429	2
1431	1
1432	3
1433	1
1435	2
1436	1
1437	2
1438	1
1441	2
1442	3
1445	1
1446	1
1448	1
1450	1
1451	1
1452	2
1453	1
1455	2
1456	1
1458	1
1459	1
1461	1
1464	1
1466	1
1467	1
1468	1
1470	2
1472	1
1473	1
1474	1
1475	1
1477	1
1479	1
1481	1
1482	1
1483	1
1485	1
1486	2
1487	2
1488	1
1489	2
1492	1
1497	2
1499	1
1501	2
1506	1
1518	1
1519	1
1520	1
1521	1
1522	1
1524	1
1525	1
1526	2
1532	1
1537	2
1538	1
1539	1
1542	1
1544	1
1545	1
1547	1
1548	1
1549	2
1550	1
1551	1
1553	1
1555	1
1556	1
1557	2
1561	2
1562	1
1566	1
1567	1
1570	1
1572	1
1574	1
1577	1
1578	1
1579	3
1582	2
1585	1
1586	1
1590	1
1591	1
1592	1
1594	1
1597	1
1598	1
1609	2
1610	1
1618	1
1620	1
1623	1
1625	2
1628	1
1635	1
1636	1
1637	1
1642	1
1644	1
1646	1
1650	1
1651	2
1652	1
1654	1
1655	1
1659	1
1660	1
1665	1
1675	1
1676	2
1677	1
1678	2
1680	1
1681	1
1684	2
1686	1
1687	1
1688	2
1702	1
1703	2
1709	1
1711	1
1713	1
1717	1
1718	1
1726	2
1728	1
1733	2
1735	1
1738	1
1739	1
1745	2
1752	1
1754	1
1755	1
1757	2
1758	1
1761	1
1762	1
1764	1
1767	1
1768	3
1769	1
1770	1
1772	1
1773	1
1774	2
1776	1
1778	1
1780	1
1794	1
1803	1
1806	1
1807	1
1809	1
1813	1
1814	1
1822	1
1828	1
1832	2
1833	1
1836	1
1839	1
1841	1
1847	1
1849	1
1854	3
1859	1
1861	2
1870	1
1875	1
1876	2
1881	1
1882	1
1884	1
1885	1
1888	1
1896	4
1903	1
1904	1
1905	1
1908	1
1919	1
1924	1
1935	1
1936	1
1940	1
1945	1
1946	2
1947	1
1950	1
1952	2
1953	1
1958	1
1960	2
1962	1
1967	1
1968	1
1969	1
1971	2
1973	1
1975	2
1976	2
1982	1
1983	1
1985	1
1987	1
1990	1
1995	1
1997	1
1999	1
2008	1
2016	1
2019	1
2022	1
2025	1
2028	1
2030	2
2032	3
2036	2
2052	1
2057	1
2058	1
2060	1
2063	1
2065	1
2070	1
2071	1
2075	1
2076	1
2078	1
2081	1
2085	1
2087	1
2088	1
2091	1
2093	1
2105	1
2106	3
2115	2
2117	1
2118	1
2119	1
2123	2
2139	1
2144	1
2150	1
2154	1
2157	1
2160	1
2167	1
2175	1
2187	1
2188	1
2192	1
2194	1
2198	1
2205	2
2206	1
2207	1
2211	1
2218	1
2220	1
2225	1
2229	1
2230	1
2234	1
2236	1
2237	1
2240	1
2249	1
2251	2
2252	1
2269	1
2270	1
2281	1
2289	1
2292	1
2299	1
2300	1
2306	2
2311	1
2312	1
2321	1
2328	1
2332	1
2333	2
2346	1
2350	4
2351	1
2363	1
2364	1
2366	1
2367	1
2373	1
2374	1
2376	1
2384	1
2388	1
2392	1
2395	1
2399	1
2402	1
2418	1
2437	1
2442	1
2453	1
2455	1
2461	1
2462	1
2464	1
2475	1
2477	1
2488	1
2498	1
2499	1
2501	1
2534	1
2537	1
2543	1
2551	1
2553	1
2554	1
2568	1
2569	1
2585	1
2586	1
2591	2
2598	1
2599	2
2604	1
2606	1
2607	1
2608	2
2610	1
2613	1
2626	1
2628	1
2635	1
2638	1
2710	1
2722	1
2725	1
2742	1
2757	1
2767	1
2784	1
2810	1
2853	1
2860	1
2865	1
2879	1
2890	1
2901	1
2902	1
2907	1
2914	1
2936	1
2942	1
2993	1
2998	1
3002	1
3009	1
3012	1
3013	1
3015	1
3042	1
3073	1
3083	1
3089	1
3123	1
3138	1
3163	1
3184	1
3205	1
3226	1
3232	1
3261	1
3278	1
3285	1
3297	1
3313	1
3321	1
3326	1
3345	2
3348	1
3369	1
3386	1
3410	1
3465	1
3470	1
3499	1
3506	1
3607	1
3677	1
3691	1
3693	1
3698	1
3742	1
3764	1
3783	1
3820	1
3840	1
3849	1
3861	1
3887	1
3904	1
3905	1
3944	1
3960	1
3981	1
4011	1
4080	1
4089	1
4158	1
4163	1
4173	1
4238	1
4342	1
4343	1
4399	1
4410	1
4420	1
4444	1
4449	1
4451	1
4459	1
4601	1
4603	1
4728	1
4748	1
4927	1
4947	1
5018	1
5035	1
5045	1
5055	1
5080	1
5090	1
5181	1
5184	1
5208	1
5396	1
5420	1
5484	1
5694	1
5861	1
5868	1
5930	1
6001	1
6951	1
7807	1
8015	1
8454	1
8507	1
8661	1
9534	1
13248	1
13862	1
14783	1
55015	1
1252306	1

[ESTIMATING YIELD CURVE]
[BOOTSTRAPPING HISTOGRAM]
.._..__.._..____.___._______..___..____._._.__.___...___._.__._.._______
._