Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8d/f61a719d6f551a12636e7425674b35/aih-tih-sc-f39d87-R1_B23WHYVLT4_1_1.fastp.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/55/e19f2dc1ed044eef32501c9abfcdd5/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/55/e19f2dc1ed044eef32501c9abfcdd5/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e5/8bbbc956793e43e094352b426d5258/aih-tih-sc-f39d87-R1_B23WHYVLT4_1.Chimeric.out.junction
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8d/f61a719d6f551a12636e7425674b35/aih-tih-sc-f39d87-R1_B23WHYVLT4_1_2.fastp.fastq.gz
==> STAGING COMPLETE (6 inputs)

-ctat genome lib [/tmp/nxf.fWsjrKCWWJ/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.fWsjrKCWWJ/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.fWsjrKCWWJ/./star-fusion.preliminary
-sample contains 229972712 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes  --genome_lib_dir /tmp/nxf.fWsjrKCWWJ/ctat_genome_lib_build_dir  -J /tmp/nxf.fWsjrKCWWJ/aih-tih-sc-f39d87-R1_B23WHYVLT4_1.Chimeric.out.junction  -O /tmp/nxf.fWsjrKCWWJ/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 
-parsing fusion evidence: /tmp/nxf.fWsjrKCWWJ/aih-tih-sc-f39d87-R1_B23WHYVLT4_1.Chimeric.out.junction
-building interval tree based on /tmp/nxf.fWsjrKCWWJ/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes

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[2160000], rate=48850.36/min -building interval tree based on /tmp/nxf.fWsjrKCWWJ/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes

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[2160000], rate=42729.97/min -building interval tree based on /tmp/nxf.fWsjrKCWWJ/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes

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[2120000], rate=38498.79/min 
[2130000], rate=38586.96/min 
[2140000], rate=38686.35/min 
[2150000], rate=38796.99/min -building interval tree based on /tmp/nxf.fWsjrKCWWJ/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes

[10000], rate=120000.00/min 
[20000], rate=109090.91/min 
[30000], rate=112500.00/min 
[40000], rate=114285.71/min 
[50000], rate=120000.00/min 
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[70000], rate=135483.87/min 
[80000], rate=137142.86/min 
[90000], rate=135000.00/min 
[100000], rate=133333.33/min 
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[1820000], rate=31985.94/min 
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[2130000], rate=32955.13/min 
[2140000], rate=33041.69/min 
[2150000], rate=33093.89/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads  -J /tmp/nxf.fWsjrKCWWJ/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt  --genome_lib_dir /tmp/nxf.fWsjrKCWWJ/ctat_genome_lib_build_dir  --filt_file /tmp/nxf.fWsjrKCWWJ/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail  -M 50  > /tmp/nxf.fWsjrKCWWJ/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass 
-parsing /tmp/nxf.fWsjrKCWWJ/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.

 6000000.00 reads per min processed...  
 12000000.00 reads per min processed...  
 9000000.00 reads per min processed...  
 6000000.00 reads per min processed...  
 6000000.00 reads per min processed...  
 5142857.14 reads per min processed...  
 4666666.67 reads per min processed...  
 4363636.36 reads per min processed...  
 4500000.00 reads per min processed...  
 4285714.29 reads per min processed...  
 4125000.00 reads per min processed...  
 4000000.00 reads per min processed...  
 4105263.16 reads per min processed...  
 4000000.00 reads per min processed...  
 3913043.48 reads per min processed...  
 3840000.00 reads per min processed...  
 3777777.78 reads per min processed...  
 3724137.93 reads per min processed...  
 3677419.35 reads per min processed...  
 3636363.64 reads per min processed...  
 3600000.00 reads per min processed...  
 3473684.21 reads per min processed...  
 3450000.00 reads per min processed...  
 3428571.43 reads per min processed...  
 3409090.91 reads per min processed...  
 3391304.35 reads per min processed...  
 3375000.00 reads per min processed...  
 3360000.00 reads per min processed...  
 3346153.85 reads per min processed...  
 3333333.33 reads per min processed...  
 3321428.57 reads per min processed...  
 3254237.29 reads per min processed...  
 3300000.00 reads per min processed...  
 3238095.24 reads per min processed...  
 3281250.00 reads per min processed...  
 3272727.27 reads per min processed...  
 3264705.88 reads per min processed...  
 3304347.83 reads per min processed...  
 3342857.14 reads per min processed...  
 3380281.69 reads per min processed...  
 3416666.67 reads per min processed...  
 3405405.41 reads per min processed...  
 3350649.35 reads per min processed...  
 3341772.15 reads per min processed...  
 3333333.33 reads per min processed...  
 3365853.66 reads per min processed...  
 3357142.86 reads per min processed...  
 3348837.21 reads per min processed...  
 3340909.09 reads per min processed...  
 3333333.33 reads per min processed...  
 3326086.96 reads per min processed...  
 3319148.94 reads per min processed...  
 3312500.00 reads per min processed...  
 3306122.45 reads per min processed...  
 3267326.73 reads per min processed...  
 3262135.92 reads per min processed...  
 3257142.86 reads per min processed...  
 3283018.87 reads per min processed...  
 3277777.78 reads per min processed...  
 3272727.27 reads per min processed...  
 3267857.14 reads per min processed...  
 3263157.89 reads per min processed...  
 3258620.69 reads per min processed...  
done.

* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict  -J /tmp/nxf.fWsjrKCWWJ/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass  -O /tmp/nxf.fWsjrKCWWJ/./star-fusion.preliminary/star-fusion 
-parsing fusion evidence: /tmp/nxf.fWsjrKCWWJ/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.fWsjrKCWWJ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter  --fusion_preds /tmp/nxf.fWsjrKCWWJ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary  -J /tmp/nxf.fWsjrKCWWJ/aih-tih-sc-f39d87-R1_B23WHYVLT4_1.Chimeric.out.junction  --tmpdir /tmp  --min_junction_reads 0  --min_sum_frags 1  --require_LDAS 0  --max_promiscuity 10  --min_pct_dom_promiscuity 20  --min_novel_junction_support 1  --min_alt_pct_junction 10  --aggregate_novel_junction_dist 5  --min_spanning_frags_only 1  --genome_lib_dir /tmp/nxf.fWsjrKCWWJ/ctat_genome_lib_build_dir  --out_prefix /tmp/nxf.fWsjrKCWWJ/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.fWsjrKCWWJ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -624852.882241
EM: Round [1] log likelihood: -624629.689074
EM: Round [2] log likelihood: -624551.404049
EM: Round [3] log likelihood: -624515.522721
EM: Round [4] log likelihood: -624496.964262
EM: Round [5] log likelihood: -624486.593159
EM: Round [6] log likelihood: -624480.421914
EM: Round [7] log likelihood: -624476.537652
EM: Round [8] log likelihood: -624473.965274
EM: Round [9] log likelihood: -624472.182630
EM: Round [10] log likelihood: -624470.897225
EM: Round [11] log likelihood: -624469.938071
EM: Round [12] log likelihood: -624469.201088
EM: Round [13] log likelihood: -624468.620487
EM: Round [14] log likelihood: -624468.153209
EM: Round [15] log likelihood: -624467.770172
EM: Round [16] log likelihood: -624467.451173
EM: Round [17] log likelihood: -624467.181826
EM: Round [18] log likelihood: -624466.951655
EM: Round [19] log likelihood: -624466.752884
EM: Round [20] log likelihood: -624466.579637
EM: Round [21] log likelihood: -624466.427402
EM: Round [22] log likelihood: -624466.292666
EM: Round [23] log likelihood: -624466.172654
EM: Round [24] log likelihood: -624466.065152
EM: Round [25] log likelihood: -624465.968365
EM: Round [26] log likelihood: -624465.880831
EM: Round [27] log likelihood: -624465.801342
EM: Round [28] log likelihood: -624465.728890
EM: Round [29] log likelihood: -624465.662632
EM: Round [30] log likelihood: -624465.601852
EM: Round [31] log likelihood: -624465.545941
EM: Round [32] log likelihood: -624465.494375
EM: Round [33] log likelihood: -624465.446703
EM: Round [34] log likelihood: -624465.402531
EM: Round [35] log likelihood: -624465.361518
EM: Round [36] log likelihood: -624465.323364
EM: Round [37] log likelihood: -624465.287802
EM: Round [38] log likelihood: -624465.254601
EM: Round [39] log likelihood: -624465.223551
EM: Round [40] log likelihood: -624465.194468
EM: Round [41] log likelihood: -624465.167187
EM: Round [42] log likelihood: -624465.141560
EM: Round [43] log likelihood: -624465.117452
EM: Round [44] log likelihood: -624465.094746
EM: Round [45] log likelihood: -624465.073331
EM: Round [46] log likelihood: -624465.053111
EM: Round [47] log likelihood: -624465.033997
EM: Round [48] log likelihood: -624465.015907
EM: Round [49] log likelihood: -624464.998769
EM: Round [50] log likelihood: -624464.982515
EM: Round [51] log likelihood: -624464.967084
EM: Round [52] log likelihood: -624464.952421
EM: Round [53] log likelihood: -624464.938473
EM: Round [54] log likelihood: -624464.925195
EM: Round [55] log likelihood: -624464.912542
EM: Round [56] log likelihood: -624464.900475
EM: Round [57] log likelihood: -624464.888957
EM: Round [58] log likelihood: -624464.877954
EM: Round [59] log likelihood: -624464.867436
EM: Round [60] log likelihood: -624464.857373
EM: Round [61] log likelihood: -624464.847739
EM: Round [62] log likelihood: -624464.838509
EM: Round [63] log likelihood: -624464.829660
EM: Round [64] log likelihood: -624464.821170
EM: Round [65] log likelihood: -624464.813021
EM: Round [66] log likelihood: -624464.805192
EM: Round [67] log likelihood: -624464.797668
EM: Round [68] log likelihood: -624464.790433
EM: Round [69] log likelihood: -624464.783470
EM: Round [70] log likelihood: -624464.776767
EM: Round [71] log likelihood: -624464.770310
EM: Round [72] log likelihood: -624464.764088
EM: Round [73] log likelihood: -624464.758088
EM: Round [74] log likelihood: -624464.752300
EM: Round [75] log likelihood: -624464.746714
EM: Round [76] log likelihood: -624464.741320
EM: Round [77] log likelihood: -624464.736110
EM: Round [78] log likelihood: -624464.731075
EM: Round [79] log likelihood: -624464.726208
EM: Round [80] log likelihood: -624464.721500
EM: Round [81] log likelihood: -624464.716946
EM: Round [82] log likelihood: -624464.712538
EM: Round [83] log likelihood: -624464.708271
EM: Round [84] log likelihood: -624464.704137
EM: Round [85] log likelihood: -624464.700133
EM: Round [86] log likelihood: -624464.696252
EM: Round [87] log likelihood: -624464.692490
EM: Round [88] log likelihood: -624464.688842
EM: Round [89] log likelihood: -624464.685303
EM: Round [90] log likelihood: -624464.681869
EM: Round [91] log likelihood: -624464.678537
EM: Round [92] log likelihood: -624464.675301
EM: Round [93] log likelihood: -624464.672160
EM: Round [94] log likelihood: -624464.669109
EM: Round [95] log likelihood: -624464.666145
EM: Round [96] log likelihood: -624464.663264
EM: Round [97] log likelihood: -624464.660465
EM: Round [98] log likelihood: -624464.657743
EM: Round [99] log likelihood: -624464.655097
EM: Round [100] log likelihood: -624464.652523
EM: Round [101] log likelihood: -624464.650020
EM: Round [102] log likelihood: -624464.647584
EM: Round [103] log likelihood: -624464.645214
EM: Round [104] log likelihood: -624464.642908
EM: Round [105] log likelihood: -624464.640663
EM: Round [106] log likelihood: -624464.638477
EM: Round [107] log likelihood: -624464.636348
EM: Round [108] log likelihood: -624464.634275
EM: Round [109] log likelihood: -624464.632256
EM: Round [110] log likelihood: -624464.630289
EM: Round [111] log likelihood: -624464.628373
EM: Round [112] log likelihood: -624464.626506
EM: Round [113] log likelihood: -624464.624686
EM: Round [114] log likelihood: -624464.622912
EM: Round [115] log likelihood: -624464.621183
EM: Round [116] log likelihood: -624464.619497
EM: Round [117] log likelihood: -624464.617854
EM: Round [118] log likelihood: -624464.616251
EM: Round [119] log likelihood: -624464.614688
EM: Round [120] log likelihood: -624464.613163
EM: Round [121] log likelihood: -624464.611676
EM: Round [122] log likelihood: -624464.610226
EM: Round [123] log likelihood: -624464.608810
EM: Round [124] log likelihood: -624464.607429
EM: Round [125] log likelihood: -624464.606082
EM: Round [126] log likelihood: -624464.604767
EM: Round [127] log likelihood: -624464.603483
EM: Round [128] log likelihood: -624464.602230
EM: Round [129] log likelihood: -624464.601007
EM: Round [130] log likelihood: -624464.599814
EM: Round [131] log likelihood: -624464.598648
EM: Round [132] log likelihood: -624464.597510
EM: Round [133] log likelihood: -624464.596399
EM: Round [134] log likelihood: -624464.595314
EM: Round [135] log likelihood: -624464.594255
EM: Round [136] log likelihood: -624464.593220
EM: Round [137] log likelihood: -624464.592210
EM: Round [138] log likelihood: -624464.591222
EM: Round [139] log likelihood: -624464.590258
EM: Round [140] log likelihood: -624464.589316
EM: Round [141] log likelihood: -624464.588396
EM: Round [142] log likelihood: -624464.587498
EM: Round [143] log likelihood: -624464.586619
EM: Round [144] log likelihood: -624464.585761
EM: Round [145] log likelihood: -624464.584923
EM: Round [146] log likelihood: -624464.584104
EM: Round [147] log likelihood: -624464.583303
EM: Round [148] log likelihood: -624464.582521
EM: Round [149] log likelihood: -624464.581756
EM: Round [150] log likelihood: -624464.581009
EM: Round [151] log likelihood: -624464.580279
EM: Round [152] log likelihood: -624464.579565
EM: Round [153] log likelihood: -624464.578867
EM: Round [154] log likelihood: -624464.578185
EM: Round [155] log likelihood: -624464.577519
EM: Round [156] log likelihood: -624464.576867
EM: Round [157] log likelihood: -624464.576230
EM: Round [158] log likelihood: -624464.575607
EM: Round [159] log likelihood: -624464.574999
EM: Round [160] log likelihood: -624464.574403
EM: Round [161] log likelihood: -624464.573821
EM: Round [162] log likelihood: -624464.573252
EM: Round [163] log likelihood: -624464.572696
EM: Round [164] log likelihood: -624464.572152
EM: Round [165] log likelihood: -624464.571620
EM: Round [166] log likelihood: -624464.571100
EM: Round [167] log likelihood: -624464.570591
EM: Round [168] log likelihood: -624464.570094
EM: Round [169] log likelihood: -624464.569607
EM: Round [170] log likelihood: -624464.569132
EM: Round [171] log likelihood: -624464.568666
EM: Round [172] log likelihood: -624464.568211
EM: Round [173] log likelihood: -624464.567766
EM: Round [174] log likelihood: -624464.567331
EM: Round [175] log likelihood: -624464.566905
EM: Round [176] log likelihood: -624464.566489
EM: Round [177] log likelihood: -624464.566082
EM: Round [178] log likelihood: -624464.565684
EM: Round [179] log likelihood: -624464.565294
EM: Round [180] log likelihood: -624464.564913
EM: Round [181] log likelihood: -624464.564540
EM: Round [182] log likelihood: -624464.564175
EM: Round [183] log likelihood: -624464.563819
EM: Round [184] log likelihood: -624464.563470
EM: Round [185] log likelihood: -624464.563128
EM: Round [186] log likelihood: -624464.562795
EM: Round [187] log likelihood: -624464.562468
EM: Round [188] log likelihood: -624464.562148
EM: Round [189] log likelihood: -624464.561836
EM: Round [190] log likelihood: -624464.561530
EM: Round [191] log likelihood: -624464.561231
EM: Round [192] log likelihood: -624464.560938
EM: Round [193] log likelihood: -624464.560651
EM: Round [194] log likelihood: -624464.560371
EM: Round [195] log likelihood: -624464.560097
EM: Round [196] log likelihood: -624464.559829
EM: Round [197] log likelihood: -624464.559566
EM: Round [198] log likelihood: -624464.559310
EM: Round [199] log likelihood: -624464.559058
EM: Round [200] log likelihood: -624464.558812
EM: Round [201] log likelihood: -624464.558572
EM: Round [202] log likelihood: -624464.558337
EM: Round [203] log likelihood: -624464.558106
EM: Round [204] log likelihood: -624464.557881
EM: Round [205] log likelihood: -624464.557660
EM: Round [206] log likelihood: -624464.557445
EM: Round [207] log likelihood: -624464.557234
EM: Round [208] log likelihood: -624464.557027
EM: Round [209] log likelihood: -624464.556825
EM: Round [210] log likelihood: -624464.556627
EM: Round [211] log likelihood: -624464.556433
EM: Round [212] log likelihood: -624464.556244
EM: Round [213] log likelihood: -624464.556059
EM: Round [214] log likelihood: -624464.555877
EM: Round [215] log likelihood: -624464.555700
EM: Round [216] log likelihood: -624464.555526
EM: Round [217] log likelihood: -624464.555356
EM: Round [218] log likelihood: -624464.555190
EM: Round [219] log likelihood: -624464.555027
EM: Round [220] log likelihood: -624464.554868
EM: Round [221] log likelihood: -624464.554712
EM: Round [222] log likelihood: -624464.554559
EM: Round [223] log likelihood: -624464.554410
EM: Round [224] log likelihood: -624464.554264
EM: Round [225] log likelihood: -624464.554121
EM: Round [226] log likelihood: -624464.553981
EM: Round [227] log likelihood: -624464.553844
EM: Round [228] log likelihood: -624464.553710
EM: Round [229] log likelihood: -624464.553578
EM: Round [230] log likelihood: -624464.553450
EM: Round [231] log likelihood: -624464.553324
EM: Round [232] log likelihood: -624464.553201
EM: Round [233] log likelihood: -624464.553081
EM: Round [234] log likelihood: -624464.552963
EM: Round [235] log likelihood: -624464.552848
EM: Round [236] log likelihood: -624464.552735
EM: Round [237] log likelihood: -624464.552624
EM: Round [238] log likelihood: -624464.552516
EM: Round [239] log likelihood: -624464.552411
EM: Round [240] log likelihood: -624464.552307
EM: Round [241] log likelihood: -624464.552206
EM: Round [242] log likelihood: -624464.552106
EM: Stopping iterations at round 242 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -624015.842708
EM: Round [1] log likelihood: -623838.459531
EM: Round [2] log likelihood: -623778.562651
EM: Round [3] log likelihood: -623751.715523
EM: Round [4] log likelihood: -623738.089963
EM: Round [5] log likelihood: -623730.604982
EM: Round [6] log likelihood: -623726.224888
EM: Round [7] log likelihood: -623723.515550
EM: Round [8] log likelihood: -623721.754760
EM: Round [9] log likelihood: -623720.559232
EM: Round [10] log likelihood: -623719.715635
EM: Round [11] log likelihood: -623719.099905
EM: Round [12] log likelihood: -623718.636947
EM: Round [13] log likelihood: -623718.279620
EM: Round [14] log likelihood: -623717.997361
EM: Round [15] log likelihood: -623717.769768
EM: Round [16] log likelihood: -623717.582872
EM: Round [17] log likelihood: -623717.426885
EM: Round [18] log likelihood: -623717.294809
EM: Round [19] log likelihood: -623717.181545
EM: Round [20] log likelihood: -623717.083314
EM: Round [21] log likelihood: -623716.997272
EM: Round [22] log likelihood: -623716.921245
EM: Round [23] log likelihood: -623716.853545
EM: Round [24] log likelihood: -623716.792850
EM: Round [25] log likelihood: -623716.738103
EM: Round [26] log likelihood: -623716.688457
EM: Round [27] log likelihood: -623716.643220
EM: Round [28] log likelihood: -623716.601820
EM: Round [29] log likelihood: -623716.563785
EM: Round [30] log likelihood: -623716.528717
EM: Round [31] log likelihood: -623716.496278
EM: Round [32] log likelihood: -623716.466183
EM: Round [33] log likelihood: -623716.438183
EM: Round [34] log likelihood: -623716.412068
EM: Round [35] log likelihood: -623716.387650
EM: Round [36] log likelihood: -623716.364769
EM: Round [37] log likelihood: -623716.343283
EM: Round [38] log likelihood: -623716.323065
EM: Round [39] log likelihood: -623716.304007
EM: Round [40] log likelihood: -623716.286008
EM: Round [41] log likelihood: -623716.268982
EM: Round [42] log likelihood: -623716.252850
EM: Round [43] log likelihood: -623716.237542
EM: Round [44] log likelihood: -623716.222995
EM: Round [45] log likelihood: -623716.209151
EM: Round [46] log likelihood: -623716.195960
EM: Round [47] log likelihood: -623716.183376
EM: Round [48] log likelihood: -623716.171356
EM: Round [49] log likelihood: -623716.159861
EM: Round [50] log likelihood: -623716.148858
EM: Round [51] log likelihood: -623716.138315
EM: Round [52] log likelihood: -623716.128202
EM: Round [53] log likelihood: -623716.118493
EM: Round [54] log likelihood: -623716.109163
EM: Round [55] log likelihood: -623716.100192
EM: Round [56] log likelihood: -623716.091557
EM: Round [57] log likelihood: -623716.083240
EM: Round [58] log likelihood: -623716.075225
EM: Round [59] log likelihood: -623716.067494
EM: Round [60] log likelihood: -623716.060032
EM: Round [61] log likelihood: -623716.052827
EM: Round [62] log likelihood: -623716.045865
EM: Round [63] log likelihood: -623716.039135
EM: Round [64] log likelihood: -623716.032625
EM: Round [65] log likelihood: -623716.026325
EM: Round [66] log likelihood: -623716.020226
EM: Round [67] log likelihood: -623716.014318
EM: Round [68] log likelihood: -623716.008594
EM: Round [69] log likelihood: -623716.003044
EM: Round [70] log likelihood: -623715.997663
EM: Round [71] log likelihood: -623715.992443
EM: Round [72] log likelihood: -623715.987377
EM: Round [73] log likelihood: -623715.982460
EM: Round [74] log likelihood: -623715.977685
EM: Round [75] log likelihood: -623715.973047
EM: Round [76] log likelihood: -623715.968541
EM: Round [77] log likelihood: -623715.964162
EM: Round [78] log likelihood: -623715.959906
EM: Round [79] log likelihood: -623715.955767
EM: Round [80] log likelihood: -623715.951742
EM: Round [81] log likelihood: -623715.947827
EM: Round [82] log likelihood: -623715.944019
EM: Round [83] log likelihood: -623715.940312
EM: Round [84] log likelihood: -623715.936705
EM: Round [85] log likelihood: -623715.933194
EM: Round [86] log likelihood: -623715.929775
EM: Round [87] log likelihood: -623715.926446
EM: Round [88] log likelihood: -623715.923203
EM: Round [89] log likelihood: -623715.920045
EM: Round [90] log likelihood: -623715.916968
EM: Round [91] log likelihood: -623715.913970
EM: Round [92] log likelihood: -623715.911049
EM: Round [93] log likelihood: -623715.908202
EM: Round [94] log likelihood: -623715.905427
EM: Round [95] log likelihood: -623715.902722
EM: Round [96] log likelihood: -623715.900084
EM: Round [97] log likelihood: -623715.897513
EM: Round [98] log likelihood: -623715.895005
EM: Round [99] log likelihood: -623715.892560
EM: Round [100] log likelihood: -623715.890174
EM: Round [101] log likelihood: -623715.887848
EM: Round [102] log likelihood: -623715.885578
EM: Round [103] log likelihood: -623715.883364
EM: Round [104] log likelihood: -623715.881204
EM: Round [105] log likelihood: -623715.879096
EM: Round [106] log likelihood: -623715.877039
EM: Round [107] log likelihood: -623715.875031
EM: Round [108] log likelihood: -623715.873072
EM: Round [109] log likelihood: -623715.871160
EM: Round [110] log likelihood: -623715.869293
EM: Round [111] log likelihood: -623715.867471
EM: Round [112] log likelihood: -623715.865692
EM: Round [113] log likelihood: -623715.863955
EM: Round [114] log likelihood: -623715.862260
EM: Round [115] log likelihood: -623715.860604
EM: Round [116] log likelihood: -623715.858987
EM: Round [117] log likelihood: -623715.857409
EM: Round [118] log likelihood: -623715.855867
EM: Round [119] log likelihood: -623715.854361
EM: Round [120] log likelihood: -623715.852890
EM: Round [121] log likelihood: -623715.851454
EM: Round [122] log likelihood: -623715.850050
EM: Round [123] log likelihood: -623715.848680
EM: Round [124] log likelihood: -623715.847341
EM: Round [125] log likelihood: -623715.846033
EM: Round [126] log likelihood: -623715.844755
EM: Round [127] log likelihood: -623715.843506
EM: Round [128] log likelihood: -623715.842286
EM: Round [129] log likelihood: -623715.841094
EM: Round [130] log likelihood: -623715.839929
EM: Round [131] log likelihood: -623715.838791
EM: Round [132] log likelihood: -623715.837679
EM: Round [133] log likelihood: -623715.836592
EM: Round [134] log likelihood: -623715.835530
EM: Round [135] log likelihood: -623715.834492
EM: Round [136] log likelihood: -623715.833477
EM: Round [137] log likelihood: -623715.832485
EM: Round [138] log likelihood: -623715.831516
EM: Round [139] log likelihood: -623715.830569
EM: Round [140] log likelihood: -623715.829642
EM: Round [141] log likelihood: -623715.828737
EM: Round [142] log likelihood: -623715.827852
EM: Round [143] log likelihood: -623715.826987
EM: Round [144] log likelihood: -623715.826142
EM: Round [145] log likelihood: -623715.825315
EM: Round [146] log likelihood: -623715.824506
EM: Round [147] log likelihood: -623715.823716
EM: Round [148] log likelihood: -623715.822944
EM: Round [149] log likelihood: -623715.822188
EM: Round [150] log likelihood: -623715.821450
EM: Round [151] log likelihood: -623715.820727
EM: Round [152] log likelihood: -623715.820021
EM: Round [153] log likelihood: -623715.819331
EM: Round [154] log likelihood: -623715.818655
EM: Round [155] log likelihood: -623715.817995
EM: Round [156] log likelihood: -623715.817349
EM: Round [157] log likelihood: -623715.816718
EM: Round [158] log likelihood: -623715.816101
EM: Round [159] log likelihood: -623715.815497
EM: Round [160] log likelihood: -623715.814906
EM: Round [161] log likelihood: -623715.814328
EM: Round [162] log likelihood: -623715.813764
EM: Round [163] log likelihood: -623715.813211
EM: Round [164] log likelihood: -623715.812671
EM: Round [165] log likelihood: -623715.812142
EM: Round [166] log likelihood: -623715.811625
EM: Round [167] log likelihood: -623715.811120
EM: Round [168] log likelihood: -623715.810625
EM: Round [169] log likelihood: -623715.810142
EM: Round [170] log likelihood: -623715.809668
EM: Round [171] log likelihood: -623715.809206
EM: Round [172] log likelihood: -623715.808753
EM: Round [173] log likelihood: -623715.808310
EM: Round [174] log likelihood: -623715.807877
EM: Round [175] log likelihood: -623715.807453
EM: Round [176] log likelihood: -623715.807038
EM: Round [177] log likelihood: -623715.806633
EM: Round [178] log likelihood: -623715.806236
EM: Round [179] log likelihood: -623715.805848
EM: Round [180] log likelihood: -623715.805468
EM: Round [181] log likelihood: -623715.805097
EM: Round [182] log likelihood: -623715.804734
EM: Round [183] log likelihood: -623715.804378
EM: Round [184] log likelihood: -623715.804030
EM: Round [185] log likelihood: -623715.803690
EM: Round [186] log likelihood: -623715.803357
EM: Round [187] log likelihood: -623715.803031
EM: Round [188] log likelihood: -623715.802712
EM: Round [189] log likelihood: -623715.802401
EM: Round [190] log likelihood: -623715.802096
EM: Round [191] log likelihood: -623715.801797
EM: Round [192] log likelihood: -623715.801505
EM: Round [193] log likelihood: -623715.801219
EM: Round [194] log likelihood: -623715.800940
EM: Round [195] log likelihood: -623715.800666
EM: Round [196] log likelihood: -623715.800398
EM: Round [197] log likelihood: -623715.800136
EM: Round [198] log likelihood: -623715.799880
EM: Round [199] log likelihood: -623715.799629
EM: Round [200] log likelihood: -623715.799384
EM: Round [201] log likelihood: -623715.799144
EM: Round [202] log likelihood: -623715.798909
EM: Round [203] log likelihood: -623715.798679
EM: Round [204] log likelihood: -623715.798454
EM: Round [205] log likelihood: -623715.798234
EM: Round [206] log likelihood: -623715.798018
EM: Round [207] log likelihood: -623715.797807
EM: Round [208] log likelihood: -623715.797601
EM: Round [209] log likelihood: -623715.797399
EM: Round [210] log likelihood: -623715.797201
EM: Round [211] log likelihood: -623715.797008
EM: Round [212] log likelihood: -623715.796819
EM: Round [213] log likelihood: -623715.796634
EM: Round [214] log likelihood: -623715.796452
EM: Round [215] log likelihood: -623715.796275
EM: Round [216] log likelihood: -623715.796102
EM: Round [217] log likelihood: -623715.795932
EM: Round [218] log likelihood: -623715.795765
EM: Round [219] log likelihood: -623715.795603
EM: Round [220] log likelihood: -623715.795444
EM: Round [221] log likelihood: -623715.795288
EM: Round [222] log likelihood: -623715.795135
EM: Round [223] log likelihood: -623715.794986
EM: Round [224] log likelihood: -623715.794840
EM: Round [225] log likelihood: -623715.794697
EM: Round [226] log likelihood: -623715.794557
EM: Round [227] log likelihood: -623715.794420
EM: Round [228] log likelihood: -623715.794286
EM: Round [229] log likelihood: -623715.794155
EM: Round [230] log likelihood: -623715.794027
EM: Round [231] log likelihood: -623715.793901
EM: Round [232] log likelihood: -623715.793778
EM: Round [233] log likelihood: -623715.793658
EM: Round [234] log likelihood: -623715.793540
EM: Round [235] log likelihood: -623715.793425
EM: Round [236] log likelihood: -623715.793312
EM: Round [237] log likelihood: -623715.793202
EM: Round [238] log likelihood: -623715.793094
EM: Round [239] log likelihood: -623715.792988
EM: Round [240] log likelihood: -623715.792884
EM: Round [241] log likelihood: -623715.792783
EM: Round [242] log likelihood: -623715.792684
EM: Stopping iterations at round 242 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.fWsjrKCWWJ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20  --fusion_preds /tmp/nxf.fWsjrKCWWJ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.fWsjrKCWWJ/ctat_genome_lib_build_dir 
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.fWsjrKCWWJ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.fWsjrKCWWJ/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.fWsjrKCWWJ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter  --genome_lib_dir /tmp/nxf.fWsjrKCWWJ/ctat_genome_lib_build_dir  --max_promiscuity 10  --min_pct_dom_promiscuity 20 
CMD: cp /tmp/nxf.fWsjrKCWWJ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.fWsjrKCWWJ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.fWsjrKCWWJ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.fWsjrKCWWJ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.fWsjrKCWWJ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.fWsjrKCWWJ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.fWsjrKCWWJ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 229972712 > /tmp/nxf.fWsjrKCWWJ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.fWsjrKCWWJ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.fWsjrKCWWJ/ctat_genome_lib_build_dir > /tmp/nxf.fWsjrKCWWJ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.fWsjrKCWWJ/ctat_genome_lib_build_dir --annotate /tmp/nxf.fWsjrKCWWJ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.fWsjrKCWWJ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.fWsjrKCWWJ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.fWsjrKCWWJ/ctat_genome_lib_build_dir
-done, see /tmp/nxf.fWsjrKCWWJ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.fWsjrKCWWJ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.fWsjrKCWWJ/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 2773, filtered: 11504)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.fWsjrKCWWJ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.fWsjrKCWWJ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl  --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.fWsjrKCWWJ/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [ENSG00000237296.9]
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WARNING, no entry stored in dbm for [ENSG00000241316.8]
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WARNING, no entry stored in dbm for [ENSG00000182841.12]
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WARNING, no entry stored in dbm for [ENSG00000288620.1]
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WARNING, no entry stored in dbm for [ENSG00000223972.5]
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WARNING, no entry stored in dbm for [ENSG00000227373.6]
WARNING, no entry stored in dbm for [ENSG00000225801.1]
WARNING, no entry stored in dbm for [ENSG00000260413.1]
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WARNING, no entry stored in dbm for [ENSG00000185710.9]
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WARNING, no entry stored in dbm for [ENSG00000273125.2]
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WARNING, no entry stored in dbm for [ENSG00000250778.1]
WARNING, no entry stored in dbm for [ENSG00000187953.10]
WARNING, no entry stored in dbm for [ENSG00000288620.1]
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WARNING, no entry stored in dbm for [ENSG00000214176.9]
WARNING, no entry stored in dbm for [ENSG00000226648.2]
WARNING, no entry stored in dbm for [ENSG00000226243.1]
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WARNING, no entry stored in dbm for [ENSG00000228981.3]
WARNING, no entry stored in dbm for [ENSG00000274602.5]
WARNING, no entry stored in dbm for [ENSG00000284747.1]
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WARNING, no entry stored in dbm for [ENSG00000259059.1]
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WARNING, no entry stored in dbm for [ENSG00000257884.2]
WARNING, no entry stored in dbm for [ENSG00000258836.2]
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WARNING, no entry stored in dbm for [ENSG00000213539.4]
WARNING, no entry stored in dbm for [ENSG00000213790.2]
WARNING, no entry stored in dbm for [ENSG00000225484.7]
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WARNING, no entry stored in dbm for [ENSG00000231383.2]
WARNING, no entry stored in dbm for [ENSG00000224376.1]
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WARNING, no entry stored in dbm for [ENSG00000237187.9]
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WARNING, no entry stored in dbm for [ENSG00000214900.11]
WARNING, no entry stored in dbm for [ENSG00000225159.1]
WARNING, no entry stored in dbm for [ENSG00000225159.1]
WARNING, no entry stored in dbm for [ENSG00000237445.2]
WARNING, no entry stored in dbm for [ENSG00000255213.1]
WARNING, no entry stored in dbm for [ENSG00000237859.2]
WARNING, no entry stored in dbm for [ENSG00000214807.2]
WARNING, no entry stored in dbm for [ENSG00000226703.1]
WARNING, no entry stored in dbm for [ENSG00000248724.6]
WARNING, no entry stored in dbm for [ENSG00000197550.3]
WARNING, no entry stored in dbm for [ENSG00000266916.7]
WARNING, no entry stored in dbm for [ENSG00000240541.3]
WARNING, no entry stored in dbm for [ENSG00000240541.3]
WARNING, no entry stored in dbm for [ENSG00000287763.1]
WARNING, no entry stored in dbm for [ENSG00000279738.1]
WARNING, no entry stored in dbm for [ENSG00000250267.2]
WARNING, no entry stored in dbm for [ENSG00000261723.1]
WARNING, no entry stored in dbm for [ENSG00000223489.1]
WARNING, no entry stored in dbm for [ENSG00000242242.6]
WARNING, no entry stored in dbm for [ENSG00000232554.9]
WARNING, no entry stored in dbm for [ENSG00000205771.6]
WARNING, no entry stored in dbm for [ENSG00000205930.10]
WARNING, no entry stored in dbm for [ENSG00000270231.4]
WARNING, no entry stored in dbm for [ENSG00000254332.1]
WARNING, no entry stored in dbm for [ENSG00000266931.2]
WARNING, no entry stored in dbm for [ENSG00000228323.2]
WARNING, no entry stored in dbm for [ENSG00000228323.2]
WARNING, no entry stored in dbm for [ENSG00000224769.1]
WARNING, no entry stored in dbm for [ENSG00000249119.1]
WARNING, no entry stored in dbm for [ENSG00000185485.14]
WARNING, no entry stored in dbm for [ENSG00000254055.2]
WARNING, no entry stored in dbm for [ENSG00000214955.5]
WARNING, no entry stored in dbm for [ENSG00000214955.5]
WARNING, no entry stored in dbm for [ENSG00000223749.11]
WARNING, no entry stored in dbm for [ENSG00000214049.8]
WARNING, no entry stored in dbm for [ENSG00000235703.6]
WARNING, no entry stored in dbm for [ENSG00000285756.2]
WARNING, no entry stored in dbm for [ENSG00000285756.2]
WARNING, no entry stored in dbm for [ENSG00000285756.2]
WARNING, no entry stored in dbm for [ENSG00000261971.8]
WARNING, no entry stored in dbm for [ENSG00000222397.1]
WARNING, no entry stored in dbm for [ENSG00000197182.14]
WARNING, no entry stored in dbm for [ENSG00000275107.1]
WARNING, no entry stored in dbm for [ENSG00000228340.6]
WARNING, no entry stored in dbm for [ENSG00000207991.1]
WARNING, no entry stored in dbm for [ENSG00000172965.17]
WARNING, no entry stored in dbm for [ENSG00000266325.1]
WARNING, no entry stored in dbm for [ENSG00000281156.1]
WARNING, no entry stored in dbm for [ENSG00000236814.1]
WARNING, no entry stored in dbm for [ENSG00000228526.7]
WARNING, no entry stored in dbm for [ENSG00000215417.13]
WARNING, no entry stored in dbm for [ENSG00000246331.2]
WARNING, no entry stored in dbm for [ENSG00000214548.18]
WARNING, no entry stored in dbm for [ENSG00000249855.1]
WARNING, no entry stored in dbm for [ENSG00000237772.2]
WARNING, no entry stored in dbm for [ENSG00000231312.7]
WARNING, no entry stored in dbm for [ENSG00000237984.3]
WARNING, no entry stored in dbm for [ENSG00000248019.3]
WARNING, no entry stored in dbm for [ENSG00000283270.1]
WARNING, no entry stored in dbm for [ENSG00000253320.7]
WARNING, no entry stored in dbm for [ENSG00000248445.5]
WARNING, no entry stored in dbm for [ENSG00000279649.1]
WARNING, no entry stored in dbm for [ENSG00000237919.5]
WARNING, no entry stored in dbm for [ENSG00000240869.3]
WARNING, no entry stored in dbm for [ENSG00000227110.7]
WARNING, no entry stored in dbm for [ENSG00000207441.1]
WARNING, no entry stored in dbm for [ENSG00000232527.8]
WARNING, no entry stored in dbm for [ENSG00000272779.1]
WARNING, no entry stored in dbm for [ENSG00000251226.1]
WARNING, no entry stored in dbm for [ENSG00000251432.7]
WARNING, no entry stored in dbm for [ENSG00000230262.8]
WARNING, no entry stored in dbm for [ENSG00000226453.2]
WARNING, no entry stored in dbm for [ENSG00000259719.6]
WARNING, no entry stored in dbm for [ENSG00000261064.1]
WARNING, no entry stored in dbm for [ENSG00000259786.7]
WARNING, no entry stored in dbm for [ENSG00000263317.1]
WARNING, no entry stored in dbm for [ENSG00000262188.2]
WARNING, no entry stored in dbm for [ENSG00000251675.1]
WARNING, no entry stored in dbm for [ENSG00000226383.7]
WARNING, no entry stored in dbm for [ENSG00000251169.2]
WARNING, no entry stored in dbm for [ENSG00000226320.6]
WARNING, no entry stored in dbm for [ENSG00000226476.6]
WARNING, no entry stored in dbm for [ENSG00000226686.8]
WARNING, no entry stored in dbm for [ENSG00000225434.3]
WARNING, no entry stored in dbm for [ENSG00000215866.8]
WARNING, no entry stored in dbm for [ENSG00000233621.2]
WARNING, no entry stored in dbm for [ENSG00000175772.11]
WARNING, no entry stored in dbm for [ENSG00000249464.6]
WARNING, no entry stored in dbm for [ENSG00000229723.1]
WARNING, no entry stored in dbm for [ENSG00000230724.9]
WARNING, no entry stored in dbm for [ENSG00000235703.6]
WARNING, no entry stored in dbm for [ENSG00000225269.3]
WARNING, no entry stored in dbm for [ENSG00000266904.6]
WARNING, no entry stored in dbm for [ENSG00000226067.7]
WARNING, no entry stored in dbm for [ENSG00000226067.7]
WARNING, no entry stored in dbm for [ENSG00000215483.11]
WARNING, no entry stored in dbm for [ENSG00000188185.13]
WARNING, no entry stored in dbm for [ENSG00000231721.7]
WARNING, no entry stored in dbm for [ENSG00000231721.7]
WARNING, no entry stored in dbm for [ENSG00000231721.7]
WARNING, no entry stored in dbm for [ENSG00000231721.7]
WARNING, no entry stored in dbm for [ENSG00000227097.5]
WARNING, no entry stored in dbm for [ENSG00000257702.3]
WARNING, no entry stored in dbm for [ENSG00000233930.4]
WARNING, no entry stored in dbm for [ENSG00000286948.1]
WARNING, no entry stored in dbm for [ENSG00000248568.1]
WARNING, no entry stored in dbm for [ENSG00000230710.2]
WARNING, no entry stored in dbm for [ENSG00000266820.1]
WARNING, no entry stored in dbm for [ENSG00000258766.1]
WARNING, no entry stored in dbm for [ENSG00000215325.4]
WARNING, no entry stored in dbm for [ENSG00000237978.6]
WARNING, no entry stored in dbm for [ENSG00000229127.2]
WARNING, no entry stored in dbm for [ENSG00000225470.8]
WARNING, no entry stored in dbm for [ENSG00000228259.3]
WARNING, no entry stored in dbm for [ENSG00000285756.2]
WARNING, no entry stored in dbm for [ENSG00000285756.2]
WARNING, no entry stored in dbm for [ENSG00000285756.2]
WARNING, no entry stored in dbm for [ENSG00000224054.1]
WARNING, no entry stored in dbm for [ENSG00000204666.3]
WARNING, no entry stored in dbm for [ENSG00000267100.1]
WARNING, no entry stored in dbm for [ENSG00000228463.10]
WARNING, no entry stored in dbm for [ENSG00000254266.6]
WARNING, no entry stored in dbm for [ENSG00000254266.6]
WARNING, no entry stored in dbm for [ENSG00000252549.1]
WARNING, no entry stored in dbm for [ENSG00000213430.6]
WARNING, no entry stored in dbm for [ENSG00000215895.4]
WARNING, no entry stored in dbm for [ENSG00000241621.1]
WARNING, no entry stored in dbm for [ENSG00000261303.6]
WARNING, no entry stored in dbm for [ENSG00000251557.2]
WARNING, no entry stored in dbm for [ENSG00000214922.9]
WARNING, no entry stored in dbm for [ENSG00000287390.1]
WARNING, no entry stored in dbm for [ENSG00000233086.8]
WARNING, no entry stored in dbm for [ENSG00000223720.2]
WARNING, no entry stored in dbm for [ENSG00000258667.2]
WARNING, no entry stored in dbm for [ENSG00000197568.14]
WARNING, no entry stored in dbm for [ENSG00000228624.7]
WARNING, no entry stored in dbm for [ENSG00000261716.2]
WARNING, no entry stored in dbm for [ENSG00000220323.4]
WARNING, no entry stored in dbm for [ENSG00000241549.8]
WARNING, no entry stored in dbm for [ENSG00000183666.17]
WARNING, no entry stored in dbm for [ENSG00000226769.1]
WARNING, no entry stored in dbm for [ENSG00000179918.19]
WARNING, no entry stored in dbm for [ENSG00000243071.1]
WARNING, no entry stored in dbm for [ENSG00000215386.13]
WARNING, no entry stored in dbm for [ENSG00000255769.7]
WARNING, no entry stored in dbm for [ENSG00000250903.9]
WARNING, no entry stored in dbm for [ENSG00000225018.1]
WARNING, no entry stored in dbm for [ENSG00000196295.12]
WARNING, no entry stored in dbm for [ENSG00000231646.6]
WARNING, no entry stored in dbm for [ENSG00000231646.6]
WARNING, no entry stored in dbm for [ENSG00000287129.1]
WARNING, no entry stored in dbm for [ENSG00000270127.2]
WARNING, no entry stored in dbm for [ENSG00000278890.1]
WARNING, no entry stored in dbm for [ENSG00000277737.3]
WARNING, no entry stored in dbm for [ENSG00000237238.3]
WARNING, no entry stored in dbm for [ENSG00000244097.1]
WARNING, no entry stored in dbm for [ENSG00000213468.7]
WARNING, no entry stored in dbm for [ENSG00000179935.10]
WARNING, no entry stored in dbm for [ENSG00000215873.2]
WARNING, no entry stored in dbm for [ENSG00000283453.2]
WARNING, no entry stored in dbm for [ENSG00000235652.9]
WARNING, no entry stored in dbm for [ENSG00000235297.3]
WARNING, no entry stored in dbm for [ENSG00000269155.2]
WARNING, no entry stored in dbm for [ENSG00000248092.8]
WARNING, no entry stored in dbm for [ENSG00000231346.5]
WARNING, no entry stored in dbm for [ENSG00000234048.1]
WARNING, no entry stored in dbm for [ENSG00000243829.1]
WARNING, no entry stored in dbm for [ENSG00000255052.5]
WARNING, no entry stored in dbm for [ENSG00000254016.3]
WARNING, no entry stored in dbm for [ENSG00000244383.2]
WARNING, no entry stored in dbm for [ENSG00000250961.2]
WARNING, no entry stored in dbm for [ENSG00000272142.4]
WARNING, no entry stored in dbm for [ENSG00000258034.1]
WARNING, no entry stored in dbm for [ENSG00000215572.2]
WARNING, no entry stored in dbm for [ENSG00000287998.1]
WARNING, no entry stored in dbm for [ENSG00000282572.2]
WARNING, no entry stored in dbm for [ENSG00000214820.3]
WARNING, no entry stored in dbm for [ENSG00000180385.8]
WARNING, no entry stored in dbm for [ENSG00000255035.2]
WARNING, no entry stored in dbm for [ENSG00000227533.6]
WARNING, no entry stored in dbm for [ENSG00000259790.1]
WARNING, no entry stored in dbm for [ENSG00000275423.1]
WARNING, no entry stored in dbm for [ENSG00000269893.8]
WARNING, no entry stored in dbm for [ENSG00000239556.4]
WARNING, no entry stored in dbm for [ENSG00000196312.15]
WARNING, no entry stored in dbm for [ENSG00000227531.1]
WARNING, no entry stored in dbm for [ENSG00000205746.9]
WARNING, no entry stored in dbm for [ENSG00000266179.2]
WARNING, no entry stored in dbm for [ENSG00000224924.7]
WARNING, no entry stored in dbm for [ENSG00000279080.1]
WARNING, no entry stored in dbm for [ENSG00000232354.8]
WARNING, no entry stored in dbm for [ENSG00000228966.2]
WARNING, no entry stored in dbm for [ENSG00000287738.1]
WARNING, no entry stored in dbm for [ENSG00000222041.11]
WARNING, no entry stored in dbm for [ENSG00000255240.6]
WARNING, no entry stored in dbm for [ENSG00000256564.1]
WARNING, no entry stored in dbm for [ENSG00000214653.4]
WARNING, no entry stored in dbm for [ENSG00000245384.2]
WARNING, no entry stored in dbm for [ENSG00000276077.4]
WARNING, no entry stored in dbm for [ENSG00000276077.4]
WARNING, no entry stored in dbm for [ENSG00000257703.6]
WARNING, no entry stored in dbm for [ENSG00000182841.12]
WARNING, no entry stored in dbm for [ENSG00000238035.8]
WARNING, no entry stored in dbm for [ENSG00000215158.9]
WARNING, no entry stored in dbm for [ENSG00000240216.7]
WARNING, no entry stored in dbm for [ENSG00000278905.1]
WARNING, no entry stored in dbm for [ENSG00000287985.1]
WARNING, no entry stored in dbm for [ENSG00000237480.3]
WARNING, no entry stored in dbm for [ENSG00000280383.1]
WARNING, no entry stored in dbm for [ENSG00000278716.1]
WARNING, no entry stored in dbm for [ENSG00000226331.1]
WARNING, no entry stored in dbm for [ENSG00000280061.1]
WARNING, no entry stored in dbm for [ENSG00000225498.1]
WARNING, no entry stored in dbm for [ENSG00000286460.1]
WARNING, no entry stored in dbm for [ENSG00000279175.1]
WARNING, no entry stored in dbm for [ENSG00000223509.8]
WARNING, no entry stored in dbm for [ENSG00000235501.6]
WARNING, no entry stored in dbm for [ENSG00000247809.9]
WARNING, no entry stored in dbm for [ENSG00000286277.1]
WARNING, no entry stored in dbm for [ENSG00000215039.7]
WARNING, no entry stored in dbm for [ENSG00000284707.2]
WARNING, no entry stored in dbm for [ENSG00000265018.6]
WARNING, no entry stored in dbm for [ENSG00000279434.1]
WARNING, no entry stored in dbm for [ENSG00000249395.4]
WARNING, no entry stored in dbm for [ENSG00000254238.1]
WARNING, no entry stored in dbm for [ENSG00000249375.8]
WARNING, no entry stored in dbm for [ENSG00000285190.1]
WARNING, no entry stored in dbm for [ENSG00000227742.2]
WARNING, no entry stored in dbm for [ENSG00000255850.2]
WARNING, no entry stored in dbm for [ENSG00000188511.12]
WARNING, no entry stored in dbm for [ENSG00000188511.12]
WARNING, no entry stored in dbm for [ENSG00000285756.2]
WARNING, no entry stored in dbm for [ENSG00000285756.2]
WARNING, no entry stored in dbm for [ENSG00000285756.2]
WARNING, no entry stored in dbm for [ENSG00000287403.1]
WARNING, no entry stored in dbm for [ENSG00000223773.7]
WARNING, no entry stored in dbm for [ENSG00000263647.1]
WARNING, no entry stored in dbm for [ENSG00000214035.3]
WARNING, no entry stored in dbm for [ENSG00000286156.1]
WARNING, no entry stored in dbm for [ENSG00000169668.11]
WARNING, no entry stored in dbm for [ENSG00000279022.1]
WARNING, no entry stored in dbm for [ENSG00000233967.7]
WARNING, no entry stored in dbm for [ENSG00000254560.6]
WARNING, no entry stored in dbm for [ENSG00000254560.6]
WARNING, no entry stored in dbm for [ENSG00000253438.4]
WARNING, no entry stored in dbm for [ENSG00000262879.6]
WARNING, no entry stored in dbm for [ENSG00000278768.2]
WARNING, no entry stored in dbm for [ENSG00000254851.1]
WARNING, no entry stored in dbm for [ENSG00000227028.6]
WARNING, no entry stored in dbm for [ENSG00000204934.10]
WARNING, no entry stored in dbm for [ENSG00000235084.3]
WARNING, no entry stored in dbm for [ENSG00000223773.7]
WARNING, no entry stored in dbm for [ENSG00000183604.14]
WARNING, no entry stored in dbm for [ENSG00000226510.1]
WARNING, no entry stored in dbm for [ENSG00000228404.1]
WARNING, no entry stored in dbm for [ENSG00000229722.1]
WARNING, no entry stored in dbm for [ENSG00000271147.8]
WARNING, no entry stored in dbm for [ENSG00000254968.7]
WARNING, no entry stored in dbm for [ENSG00000257027.1]
WARNING, no entry stored in dbm for [ENSG00000196204.12]
WARNING, no entry stored in dbm for [ENSG00000239731.3]
WARNING, no entry stored in dbm for [ENSG00000214293.9]
WARNING, no entry stored in dbm for [ENSG00000229925.1]
WARNING, no entry stored in dbm for [ENSG00000259290.1]
WARNING, no entry stored in dbm for [ENSG00000234034.1]
WARNING, no entry stored in dbm for [ENSG00000247137.9]
WARNING, no entry stored in dbm for [ENSG00000176984.6]
WARNING, no entry stored in dbm for [ENSG00000224309.7]
WARNING, no entry stored in dbm for [ENSG00000225648.5]
WARNING, no entry stored in dbm for [ENSG00000224309.7]
WARNING, no entry stored in dbm for [ENSG00000236564.1]
WARNING, no entry stored in dbm for [ENSG00000266931.2]
WARNING, no entry stored in dbm for [ENSG00000215067.10]
WARNING, no entry stored in dbm for [ENSG00000287310.1]
WARNING, no entry stored in dbm for [ENSG00000259984.1]
WARNING, no entry stored in dbm for [ENSG00000259984.1]
WARNING, no entry stored in dbm for [ENSG00000286724.1]
WARNING, no entry stored in dbm for [ENSG00000234712.1]
WARNING, no entry stored in dbm for [ENSG00000274628.5]
WARNING, no entry stored in dbm for [ENSG00000242375.1]
WARNING, no entry stored in dbm for [ENSG00000188801.9]
WARNING, no entry stored in dbm for [ENSG00000283480.1]
WARNING, no entry stored in dbm for [ENSG00000287460.1]
WARNING, no entry stored in dbm for [ENSG00000235749.3]
WARNING, no entry stored in dbm for [ENSG00000232347.1]
WARNING, no entry stored in dbm for [ENSG00000235582.2]
WARNING, no entry stored in dbm for [ENSG00000215016.2]
WARNING, no entry stored in dbm for [ENSG00000287839.1]
WARNING, no entry stored in dbm for [ENSG00000204790.9]
WARNING, no entry stored in dbm for [ENSG00000228430.9]
WARNING, no entry stored in dbm for [ENSG00000237788.1]
WARNING, no entry stored in dbm for [ENSG00000286162.2]
WARNING, no entry stored in dbm for [ENSG00000237626.2]
WARNING, no entry stored in dbm for [ENSG00000247970.2]
WARNING, no entry stored in dbm for [ENSG00000280660.1]
WARNING, no entry stored in dbm for [ENSG00000228436.3]
WARNING, no entry stored in dbm for [ENSG00000227240.2]
WARNING, no entry stored in dbm for [ENSG00000286071.1]
WARNING, no entry stored in dbm for [ENSG00000258800.1]
WARNING, no entry stored in dbm for [ENSG00000237301.1]
WARNING, no entry stored in dbm for [ENSG00000286546.1]
WARNING, no entry stored in dbm for [ENSG00000287100.1]
WARNING, no entry stored in dbm for [ENSG00000233755.1]
WARNING, no entry stored in dbm for [ENSG00000259186.1]
WARNING, no entry stored in dbm for [ENSG00000227486.2]
WARNING, no entry stored in dbm for [ENSG00000227486.2]
WARNING, no entry stored in dbm for [ENSG00000274760.1]
WARNING, no entry stored in dbm for [ENSG00000274760.1]
WARNING, no entry stored in dbm for [ENSG00000227681.5]
WARNING, no entry stored in dbm for [ENSG00000260425.1]
WARNING, no entry stored in dbm for [ENSG00000279738.1]
WARNING, no entry stored in dbm for [ENSG00000258212.1]
WARNING, no entry stored in dbm for [ENSG00000196295.12]
WARNING, no entry stored in dbm for [ENSG00000241383.2]
WARNING, no entry stored in dbm for [ENSG00000231187.3]
WARNING, no entry stored in dbm for [ENSG00000258730.1]
WARNING, no entry stored in dbm for [ENSG00000267135.2]
WARNING, no entry stored in dbm for [ENSG00000286912.1]
WARNING, no entry stored in dbm for [ENSG00000198221.10]
WARNING, no entry stored in dbm for [ENSG00000288033.1]
WARNING, no entry stored in dbm for [ENSG00000274993.1]
WARNING, no entry stored in dbm for [ENSG00000259774.1]
WARNING, no entry stored in dbm for [ENSG00000278182.1]
WARNING, no entry stored in dbm for [ENSG00000277702.1]
WARNING, no entry stored in dbm for [ENSG00000277702.1]
WARNING, no entry stored in dbm for [ENSG00000224216.1]
WARNING, no entry stored in dbm for [ENSG00000282572.2]
WARNING, no entry stored in dbm for [ENSG00000275121.1]
WARNING, no entry stored in dbm for [ENSG00000251417.2]
WARNING, no entry stored in dbm for [ENSG00000246596.7]
WARNING, no entry stored in dbm for [ENSG00000286406.1]
WARNING, no entry stored in dbm for [ENSG00000215158.9]
WARNING, no entry stored in dbm for [ENSG00000229930.1]
WARNING, no entry stored in dbm for [ENSG00000267305.2]
WARNING, no entry stored in dbm for [ENSG00000278212.2]
WARNING, no entry stored in dbm for [ENSG00000278212.2]
WARNING, no entry stored in dbm for [ENSG00000240103.2]
WARNING, no entry stored in dbm for [ENSG00000259871.1]
WARNING, no entry stored in dbm for [ENSG00000287312.1]
WARNING, no entry stored in dbm for [ENSG00000260860.2]
WARNING, no entry stored in dbm for [ENSG00000279072.1]
WARNING, no entry stored in dbm for [ENSG00000249413.2]
WARNING, no entry stored in dbm for [ENSG00000251501.1]
WARNING, no entry stored in dbm for [ENSG00000250863.2]
WARNING, no entry stored in dbm for [ENSG00000235421.1]
WARNING, no entry stored in dbm for [ENSG00000287463.1]
WARNING, no entry stored in dbm for [ENSG00000244513.7]
WARNING, no entry stored in dbm for [ENSG00000168405.17]
WARNING, no entry stored in dbm for [ENSG00000249951.1]
WARNING, no entry stored in dbm for [ENSG00000286136.2]
WARNING, no entry stored in dbm for [ENSG00000170089.15]
WARNING, no entry stored in dbm for [ENSG00000260776.6]
WARNING, no entry stored in dbm for [ENSG00000288005.1]
WARNING, no entry stored in dbm for [ENSG00000224479.6]
WARNING, no entry stored in dbm for [ENSG00000254035.1]
WARNING, no entry stored in dbm for [ENSG00000253154.2]
WARNING, no entry stored in dbm for [ENSG00000231252.3]
WARNING, no entry stored in dbm for [ENSG00000243960.1]
WARNING, no entry stored in dbm for [ENSG00000234287.1]
WARNING, no entry stored in dbm for [ENSG00000227745.1]
WARNING, no entry stored in dbm for [ENSG00000234917.2]
WARNING, no entry stored in dbm for [ENSG00000287129.1]
WARNING, no entry stored in dbm for [ENSG00000231646.6]
WARNING, no entry stored in dbm for [ENSG00000284648.1]
WARNING, no entry stored in dbm for [ENSG00000242759.8]
WARNING, no entry stored in dbm for [ENSG00000250039.4]
WARNING, no entry stored in dbm for [ENSG00000277007.1]
WARNING, no entry stored in dbm for [ENSG00000251378.1]
WARNING, no entry stored in dbm for [ENSG00000287416.1]
WARNING, no entry stored in dbm for [ENSG00000269292.1]
WARNING, no entry stored in dbm for [ENSG00000250860.1]
WARNING, no entry stored in dbm for [ENSG00000287706.1]
WARNING, no entry stored in dbm for [ENSG00000279530.2]
WARNING, no entry stored in dbm for [ENSG00000236773.1]
WARNING, no entry stored in dbm for [ENSG00000282057.1]
WARNING, no entry stored in dbm for [ENSG00000286556.1]
WARNING, no entry stored in dbm for [ENSG00000267198.1]
WARNING, no entry stored in dbm for [ENSG00000131484.4]
WARNING, no entry stored in dbm for [ENSG00000287042.1]
WARNING, no entry stored in dbm for [ENSG00000224728.1]
WARNING, no entry stored in dbm for [ENSG00000167912.6]
WARNING, no entry stored in dbm for [ENSG00000262580.5]
WARNING, no entry stored in dbm for [ENSG00000226521.7]
WARNING, no entry stored in dbm for [ENSG00000278743.1]
WARNING, no entry stored in dbm for [ENSG00000204745.4]
WARNING, no entry stored in dbm for [ENSG00000204745.4]
WARNING, no entry stored in dbm for [ENSG00000237666.2]
WARNING, no entry stored in dbm for [ENSG00000287022.1]
WARNING, no entry stored in dbm for [ENSG00000227158.1]
WARNING, no entry stored in dbm for [ENSG00000217455.8]
WARNING, no entry stored in dbm for [ENSG00000278424.1]
WARNING, no entry stored in dbm for [ENSG00000283674.3]
WARNING, no entry stored in dbm for [ENSG00000235027.1]
WARNING, no entry stored in dbm for [ENSG00000287710.1]
WARNING, no entry stored in dbm for [ENSG00000285973.2]
WARNING, no entry stored in dbm for [ENSG00000280331.1]
WARNING, no entry stored in dbm for [ENSG00000267002.4]
WARNING, no entry stored in dbm for [ENSG00000267002.4]
WARNING, no entry stored in dbm for [ENSG00000223703.1]
WARNING, no entry stored in dbm for [ENSG00000279091.1]
WARNING, no entry stored in dbm for [ENSG00000234337.4]
WARNING, no entry stored in dbm for [ENSG00000188002.10]
WARNING, no entry stored in dbm for [ENSG00000254485.5]
WARNING, no entry stored in dbm for [ENSG00000281311.1]
WARNING, no entry stored in dbm for [ENSG00000250764.1]
WARNING, no entry stored in dbm for [ENSG00000288523.1]
WARNING, no entry stored in dbm for [ENSG00000288545.1]
WARNING, no entry stored in dbm for [ENSG00000234940.1]
WARNING, no entry stored in dbm for [ENSG00000285971.1]
WARNING, no entry stored in dbm for [ENSG00000253636.1]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000242338.6]
WARNING, no entry stored in dbm for [ENSG00000268093.1]
WARNING, no entry stored in dbm for [ENSG00000272800.3]
WARNING, no entry stored in dbm for [ENSG00000286534.1]
WARNING, no entry stored in dbm for [ENSG00000285106.2]
WARNING, no entry stored in dbm for [ENSG00000285106.2]
WARNING, no entry stored in dbm for [ENSG00000226380.9]
WARNING, no entry stored in dbm for [ENSG00000218175.2]
WARNING, no entry stored in dbm for [ENSG00000188850.9]
WARNING, no entry stored in dbm for [ENSG00000232386.9]
WARNING, no entry stored in dbm for [ENSG00000232386.9]
WARNING, no entry stored in dbm for [ENSG00000259345.7]
WARNING, no entry stored in dbm for [ENSG00000257327.1]
WARNING, no entry stored in dbm for [ENSG00000227400.2]
WARNING, no entry stored in dbm for [ENSG00000274499.1]
WARNING, no entry stored in dbm for [ENSG00000274499.1]
WARNING, no entry stored in dbm for [ENSG00000274499.1]
WARNING, no entry stored in dbm for [ENSG00000274499.1]
WARNING, no entry stored in dbm for [ENSG00000280594.1]
WARNING, no entry stored in dbm for [ENSG00000274499.1]
WARNING, no entry stored in dbm for [ENSG00000260599.1]
WARNING, no entry stored in dbm for [ENSG00000286615.1]
WARNING, no entry stored in dbm for [ENSG00000254363.6]
WARNING, no entry stored in dbm for [ENSG00000249839.1]
WARNING, no entry stored in dbm for [ENSG00000275734.2]
WARNING, no entry stored in dbm for [ENSG00000287127.1]
WARNING, no entry stored in dbm for [ENSG00000224152.1]
WARNING, no entry stored in dbm for [ENSG00000284649.1]
WARNING, no entry stored in dbm for [ENSG00000214331.8]
WARNING, no entry stored in dbm for [ENSG00000269243.1]
WARNING, no entry stored in dbm for [ENSG00000248406.1]
WARNING, no entry stored in dbm for [ENSG00000257261.6]
WARNING, no entry stored in dbm for [ENSG00000267009.6]
WARNING, no entry stored in dbm for [ENSG00000233565.1]
WARNING, no entry stored in dbm for [ENSG00000257074.3]
WARNING, no entry stored in dbm for [ENSG00000259962.1]
WARNING, no entry stored in dbm for [ENSG00000233891.8]
WARNING, no entry stored in dbm for [ENSG00000279352.1]
WARNING, no entry stored in dbm for [ENSG00000257078.1]
WARNING, no entry stored in dbm for [ENSG00000267575.7]
WARNING, no entry stored in dbm for [ENSG00000287379.1]
WARNING, no entry stored in dbm for [ENSG00000269968.1]
WARNING, no entry stored in dbm for [ENSG00000266933.2]
WARNING, no entry stored in dbm for [ENSG00000254099.1]
WARNING, no entry stored in dbm for [ENSG00000226509.1]
WARNING, no entry stored in dbm for [ENSG00000230825.2]
WARNING, no entry stored in dbm for [ENSG00000267623.3]
WARNING, no entry stored in dbm for [ENSG00000256210.3]
WARNING, no entry stored in dbm for [ENSG00000214243.3]
WARNING, no entry stored in dbm for [ENSG00000205485.13]
WARNING, no entry stored in dbm for [ENSG00000205485.13]
WARNING, no entry stored in dbm for [ENSG00000243554.1]
WARNING, no entry stored in dbm for [ENSG00000287292.1]
WARNING, no entry stored in dbm for [ENSG00000196922.10]
WARNING, no entry stored in dbm for [ENSG00000224781.1]
WARNING, no entry stored in dbm for [ENSG00000251595.7]
WARNING, no entry stored in dbm for [ENSG00000234129.8]
WARNING, no entry stored in dbm for [ENSG00000234129.8]


	* STAR-Fusion complete.  See output: /tmp/nxf.fWsjrKCWWJ/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)