Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir/ref_genome.fa
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d9/b9946f8ed9d8dc3855aa22a3460169/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d9/b9946f8ed9d8dc3855aa22a3460169/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/57/bb40e0937fbcece010da0d204b88d9/aih-tih-sc-4cd8a8-R1_B23WHYVLT4_1.Aligned.sortedByCoord.out.bam.bai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8f/51ab416d9d1aedbc5244357b1dee69/aih-tih-sc-4cd8a8-R1_B23WHYVLT4_1.Aligned.sortedByCoord.out.bam
==> STAGING COMPLETE (5 inputs)

ls: *.sam: No such file or directory
ls: *.csi: No such file or directory
ls: *.crai: No such file or directory