Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/09/e95e58a1d4bce64d368d2c09cb7636/aih-tih-sc-446670-R1_B23WHYVLT4_1.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/22/d2a354217d6f56fbd05cbfec1e7ff4/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/22/d2a354217d6f56fbd05cbfec1e7ff4/.command.run
==> STAGING COMPLETE (3 inputs)

PAIRED_END_BAM_INPUT
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paired = 218927097
unpaired = 3975864
MERGED PAIRED END READS = 218927097
MATES PROCESSED = 441830058
TOTAL READS     = 222902961
DISTINCT READS  = 9.32445e+07
DISTINCT COUNTS = 1153
MAX COUNT       = 967541
COUNTS OF 1     = 4.80427e+07
MAX TERMS       = 100
OBSERVED COUNTS (967542)
1	48042652
2	21567592
3	10263583
4	5155945
5	2757456
6	1584217
7	970522
8	632080
9	434044
10	312226
11	231725
12	177459
13	140877
14	112841
15	93227
16	77485
17	65453
18	55505
19	47463
20	41781
21	36686
22	32334
23	28906
24	25432
25	23117
26	20593
27	18638
28	17030
29	15730
30	14285
31	12974
32	11984
33	11067
34	10277
35	9426
36	8839
37	8045
38	7683
39	7235
40	6732
41	6207
42	5764
43	5573
44	5069
45	4853
46	4625
47	4252
48	4176
49	3834
50	3615
51	3552
52	3348
53	3141
54	3054
55	2848
56	2687
57	2560
58	2575
59	2404
60	2200
61	2223
62	2168
63	1960
64	2010
65	1900
66	1715
67	1649
68	1662
69	1589
70	1527
71	1499
72	1425
73	1301
74	1169
75	1270
76	1192
77	1160
78	1106
79	1103
80	1097
81	999
82	948
83	930
84	942
85	903
86	868
87	830
88	760
89	741
90	757
91	705
92	732
93	691
94	714
95	641
96	638
97	622
98	581
99	573
100	571
101	520
102	560
103	511
104	504
105	487
106	506
107	532
108	465
109	398
110	442
111	414
112	427
113	405
114	429
115	398
116	394
117	367
118	366
119	338
120	366
121	340
122	329
123	328
124	298
125	322
126	322
127	277
128	295
129	285
130	266
131	272
132	272
133	282
134	255
135	234
136	251
137	246
138	219
139	235
140	241
141	215
142	249
143	215
144	179
145	223
146	207
147	196
148	188
149	176
150	165
151	187
152	212
153	173
154	184
155	176
156	196
157	171
158	167
159	165
160	141
161	168
162	167
163	153
164	131
165	158
166	121
167	140
168	131
169	138
170	139
171	147
172	133
173	102
174	111
175	118
176	111
177	128
178	128
179	106
180	83
181	116
182	99
183	118
184	109
185	128
186	95
187	89
188	113
189	112
190	91
191	87
192	92
193	101
194	95
195	74
196	84
197	84
198	76
199	81
200	102
201	65
202	76
203	72
204	88
205	68
206	77
207	68
208	72
209	70
210	62
211	78
212	73
213	68
214	65
215	75
216	69
217	73
218	55
219	72
220	55
221	43
222	55
223	65
224	66
225	53
226	57
227	63
228	54
229	43
230	58
231	50
232	64
233	56
234	58
235	78
236	57
237	45
238	42
239	53
240	42
241	46
242	38
243	35
244	47
245	47
246	50
247	44
248	44
249	28
250	46
251	42
252	51
253	49
254	44
255	52
256	31
257	37
258	43
259	42
260	42
261	40
262	37
263	43
264	29
265	44
266	32
267	34
268	39
269	24
270	35
271	34
272	37
273	25
274	32
275	35
276	39
277	32
278	28
279	33
280	38
281	32
282	18
283	29
284	28
285	26
286	26
287	37
288	27
289	30
290	27
291	24
292	30
293	25
294	22
295	23
296	32
297	25
298	28
299	28
300	15
301	23
302	24
303	25
304	25
305	30
306	30
307	19
308	25
309	25
310	24
311	23
312	27
313	21
314	18
315	13
316	31
317	21
318	26
319	22
320	25
321	15
322	22
323	19
324	18
325	25
326	20
327	21
328	11
329	13
330	13
331	20
332	28
333	23
334	15
335	14
336	18
337	13
338	12
339	13
340	14
341	19
342	16
343	24
344	20
345	20
346	18
347	12
348	18
349	19
350	18
351	12
352	16
353	18
354	14
355	14
356	20
357	16
358	16
359	17
360	18
361	18
362	13
363	21
364	13
365	14
366	22
367	13
368	13
369	23
370	18
371	19
372	15
373	11
374	9
375	9
376	11
377	16
378	13
379	15
380	24
381	15
382	17
383	12
384	12
385	13
386	12
387	15
388	13
389	13
390	10
391	8
392	10
393	19
394	12
395	12
396	9
397	11
398	11
399	8
400	16
401	6
402	13
403	9
404	13
405	11
406	10
407	10
408	12
409	10
410	13
411	9
412	13
413	6
414	10
415	10
416	8
417	12
418	10
419	9
420	8
421	15
422	12
423	8
424	8
425	5
426	7
427	6
428	7
429	6
430	6
431	11
432	9
433	11
434	13
435	15
436	7
437	9
438	5
439	11
440	11
441	10
442	9
443	8
444	9
445	10
446	4
447	4
448	5
449	12
450	5
451	6
452	5
453	5
454	7
455	9
456	7
457	4
458	7
459	11
460	6
461	12
462	6
463	9
464	5
465	6
466	13
467	4
468	5
469	6
470	5
471	6
472	9
473	7
474	11
475	13
476	4
477	6
478	8
479	7
480	10
481	5
482	7
483	9
484	6
485	2
486	11
487	3
488	6
489	4
490	8
491	12
492	5
493	8
494	4
495	9
496	4
497	3
498	4
499	6
500	1
501	4
502	5
503	6
504	6
505	3
506	8
507	8
508	4
509	1
510	6
511	1
512	3
513	8
514	1
515	6
516	3
517	6
518	3
519	5
520	4
521	3
522	3
523	10
524	5
525	5
526	5
527	5
528	6
529	5
530	4
531	6
532	2
533	8
534	1
535	6
536	4
537	4
538	5
539	4
540	4
541	3
542	2
543	4
544	5
545	4
546	5
547	6
548	2
549	6
550	8
551	4
552	4
553	2
554	3
555	5
556	5
557	4
558	3
559	2
560	6
561	2
562	4
563	8
564	13
565	4
566	3
567	2
568	6
569	6
570	1
571	4
572	1
573	5
574	1
575	2
576	2
577	6
578	5
579	6
580	4
581	3
582	5
583	1
584	2
585	5
586	5
587	4
588	1
589	3
590	1
591	3
592	7
593	5
594	5
595	5
596	5
597	3
598	6
599	2
600	4
601	4
602	1
603	2
604	4
605	2
606	2
607	4
608	1
609	2
610	4
611	3
612	5
613	2
614	3
615	4
616	4
617	4
618	4
619	4
620	3
621	3
622	5
623	2
624	2
625	3
626	3
627	3
628	3
629	4
631	2
632	1
633	2
634	1
635	5
636	4
637	2
638	2
639	4
640	4
641	3
642	1
643	5
644	2
645	2
646	1
647	3
648	4
649	2
650	4
651	1
652	2
655	4
656	3
657	1
658	4
660	2
661	1
662	3
663	3
664	2
665	3
666	2
667	3
668	2
669	2
670	4
671	1
672	3
673	1
674	3
675	5
676	4
677	3
678	1
679	1
680	2
681	2
682	1
683	1
684	2
685	1
686	4
687	1
688	2
689	5
690	1
691	3
692	3
693	2
694	2
697	1
699	1
700	2
701	3
702	2
703	7
704	2
705	2
707	1
708	2
709	3
711	1
712	3
713	4
714	2
715	1
716	1
717	1
718	1
719	1
720	2
721	3
722	2
726	1
727	3
728	2
729	1
730	3
732	5
733	1
734	1
735	1
736	5
737	3
739	1
741	1
742	3
745	1
746	1
747	3
749	3
750	1
753	4
754	4
756	1
757	1
758	1
759	2
760	2
763	1
765	2
767	2
768	1
769	4
770	1
771	1
772	1
774	1
775	3
776	5
777	2
779	1
781	2
782	2
783	1
784	2
786	2
787	1
789	1
790	3
791	2
792	4
794	3
795	3
796	1
797	1
798	2
801	1
802	3
803	1
806	1
807	3
810	1
811	1
812	3
813	1
814	1
815	5
816	1
817	1
820	3
821	2
823	1
824	1
825	1
827	1
829	2
830	1
831	1
832	1
833	1
834	2
835	1
838	1
840	1
841	2
842	1
843	2
847	2
850	1
851	3
853	1
855	2
857	1
859	1
860	2
861	2
862	2
863	2
864	1
865	1
867	1
869	1
870	1
871	3
873	1
877	1
878	1
879	3
881	2
882	2
883	1
887	1
889	2
890	1
891	2
893	2
894	1
897	1
898	1
899	2
902	2
903	2
904	1
905	1
906	2
907	1
908	1
909	2
910	2
912	1
913	1
915	2
918	1
919	1
920	2
924	2
925	1
926	1
927	1
928	2
932	1
933	2
934	1
935	2
936	2
938	1
940	1
947	1
950	1
955	1
956	2
957	1
958	1
960	1
962	3
963	1
966	1
971	1
972	1
974	1
975	1
977	2
979	1
980	1
981	1
982	1
983	1
987	3
988	1
989	1
993	1
1001	1
1002	1
1004	1
1005	3
1007	1
1008	1
1009	1
1010	1
1013	2
1014	3
1015	2
1016	1
1017	2
1018	1
1022	1
1025	1
1028	2
1030	1
1031	1
1032	2
1033	2
1034	2
1035	1
1037	1
1040	1
1042	2
1057	1
1058	1
1060	1
1062	1
1063	2
1070	1
1071	1
1072	1
1073	3
1074	1
1075	1
1077	1
1079	2
1083	1
1087	1
1090	1
1094	1
1096	2
1098	1
1099	1
1100	1
1105	1
1108	1
1110	2
1113	2
1117	1
1119	1
1126	1
1127	1
1134	1
1135	1
1136	2
1140	3
1142	1
1149	1
1150	1
1155	1
1159	1
1160	1
1166	1
1169	1
1170	1
1172	1
1179	1
1181	1
1192	1
1199	1
1200	1
1212	2
1215	2
1222	2
1223	1
1226	2
1227	1
1228	1
1230	1
1232	1
1235	1
1244	1
1258	2
1259	2
1263	1
1266	1
1284	1
1285	1
1291	1
1294	1
1304	1
1305	1
1306	1
1307	1
1309	1
1310	1
1311	1
1322	2
1327	1
1339	1
1348	1
1357	2
1361	2
1365	1
1368	1
1371	1
1377	2
1383	1
1384	1
1392	1
1397	1
1401	1
1404	1
1411	1
1417	2
1419	2
1421	1
1431	1
1437	1
1440	1
1442	1
1444	1
1446	1
1449	2
1458	1
1462	1
1465	1
1472	1
1484	1
1491	1
1492	1
1496	1
1506	1
1510	1
1525	1
1526	1
1529	1
1534	1
1547	1
1555	1
1560	1
1563	1
1568	1
1573	1
1576	1
1583	1
1588	1
1598	1
1602	1
1614	2
1615	1
1619	1
1627	1
1628	1
1630	1
1631	1
1640	1
1641	1
1643	1
1647	2
1662	1
1666	1
1667	1
1669	1
1670	2
1676	1
1677	1
1680	1
1684	1
1685	1
1692	1
1714	1
1717	1
1720	1
1727	1
1740	1
1747	1
1749	1
1756	1
1774	1
1781	1
1783	1
1786	1
1792	1
1808	1
1809	1
1816	1
1823	1
1841	1
1843	1
1847	1
1848	1
1850	1
1861	1
1864	1
1869	1
1875	1
1877	1
1888	1
1891	1
1901	1
1902	1
1903	2
1905	1
1906	1
1917	2
1921	1
1922	1
1947	1
1970	1
1990	1
2000	1
2007	1
2023	1
2070	2
2081	1
2107	2
2119	1
2120	1
2134	1
2148	1
2157	1
2165	1
2167	1
2168	2
2172	1
2198	1
2270	1
2309	1
2319	1
2346	1
2354	1
2403	1
2451	1
2550	1
2625	1
2667	1
2679	1
2708	1
2709	1
2843	1
2884	1
2914	1
2940	1
2972	1
3026	1
3154	1
3199	1
3347	1
3383	1
3457	1
3501	1
3556	1
3591	1
3680	1
3738	1
3787	1
4083	1
4352	1
4464	1
4525	1
4682	1
6414	1
10539	1
11361	1
12758	1
44285	1
967541	1

[ESTIMATING YIELD CURVE]
[BOOTSTRAPPING HISTOGRAM]
_......._.....__.__................_.._..._............................_
.....__.._._....._.__._.___......_....._....._..._._..
[COMPUTING CONFIDENCE INTERVALS]
[WRITING OUTPUT]