Lane,SampleID,Index,# Reads,# Perfect Index Reads,# One Mismatch Index Reads,# Two Mismatch Index Reads,% Reads,% Perfect Index Reads,% One Mismatch Index Reads,% Two Mismatch Index Reads 3,aih-tih-sc-9fb608-R1_A23WJ53LT4_1,TAACTTGGTC-GTCGTGAATC,39874790,39082488,792302,0,0.0102,0.9801,0.0199,0.0000 3,aih-tih-sc-d64bdd-R1_A23WJ53LT4_1,ATAAGCGGAG-CTGTTCTACG,32452662,31430768,1021894,0,0.0083,0.9685,0.0315,0.0000 3,aih-tih-sc-7cc8a0-R1_A23WJ53LT4_1,AGTAGTGTTG-AACACCTCTT,56300531,55173091,1127440,0,0.0144,0.9800,0.0200,0.0000 3,aih-tih-sc-560d56-R1_A23WJ53LT4_1,ATGTTGCCAC-TAGAAGCCAT,23182471,22719323,463148,0,0.0059,0.9800,0.0200,0.0000 3,aih-tih-sc-9f6030-R1_A23WJ53LT4_1,CAGCAGGTCA-CACTTAGGTA,33104710,32546025,558685,0,0.0085,0.9831,0.0169,0.0000 3,aih-tih-sc-606237-R1_A23WJ53LT4_1,TCTAGCTGCG-ATAGGTAAGG,58844347,57690780,1153567,0,0.0151,0.9804,0.0196,0.0000 3,aih-tih-sc-674b78-R1_A23WJ53LT4_1,AGATTAGCGT-CGCCTTATAT,47236291,45909600,1326691,0,0.0121,0.9719,0.0281,0.0000 3,aih-tih-sc-2ca847-R1_A23WJ53LT4_1,AGGTAACAAC-GCACGATGCT,21128373,20728213,400160,0,0.0054,0.9811,0.0189,0.0000 3,aih-tih-sc-bec563-R1_A23WJ53LT4_1,CGCACTTCGT-AATATGCCAG,52010427,51023358,987069,0,0.0133,0.9810,0.0190,0.0000 3,aih-tih-sc-2a8dd7-R1_A23WJ53LT4_1,CTTGCTATTC-TAGAGTCACG,50852504,49811679,1040825,0,0.0130,0.9795,0.0205,0.0000 3,aih-tih-sc-3e4d53-R1_A23WJ53LT4_1,TCTCACCAGG-TTAACAGGTC,30711956,30026152,685804,0,0.0079,0.9777,0.0223,0.0000 3,aih-tih-sc-6fcd81-R1_A23WJ53LT4_1,TTCCTCACGT-ACATGAGCCA,54732273,53693054,1039219,0,0.0140,0.9810,0.0190,0.0000 3,aih-tih-sc-0ce15f-R1_A23WJ53LT4_1,TCGAACACGA-GCGAGGTTCT,21519454,21096181,423273,0,0.0055,0.9803,0.0197,0.0000 3,aih-tih-sc-3eb8dd-R1_A23WJ53LT4_1,TCCAACTGAA-TGTCCGTAGG,27748760,27127652,621108,0,0.0071,0.9776,0.0224,0.0000 3,aih-tih-sc-4fd42c-R1_A23WJ53LT4_1,GAACCGCATT-CATTATGCCT,66615632,65379430,1236202,0,0.0171,0.9814,0.0186,0.0000 3,aih-tih-sc-12b72b-R1_A23WJ53LT4_1,ACAACAGGCT-TCCACTGTTG,38834782,38138343,696439,0,0.0099,0.9821,0.0179,0.0000 3,aih-tih-sc-9faac1-R1_A23WJ53LT4_1,TTACGCGCAT-CTTAACGACA,38168293,37470200,698093,0,0.0098,0.9817,0.0183,0.0000 3,aih-tih-sc-331e97-R1_A23WJ53LT4_1,TTCTCTTAGC-TCCTCGAGCT,104441,102472,1969,0,0.0000,0.9811,0.0189,0.0000 3,aih-tih-sc-9be8d4-R1_A23WJ53LT4_1,TCGCGACACT-CGAGTAATGT,51306543,50319656,986887,0,0.0131,0.9808,0.0192,0.0000 3,aih-tih-sc-5e5452-R1_A23WJ53LT4_1,TGGAGATCGA-CAGCGGTATG,16964458,16470938,493520,0,0.0043,0.9709,0.0291,0.0000 3,aih-tih-sc-1351d2-R1_A23WJ53LT4_1,CCAGACCGAT-GCTACTTGCA,31432126,30752992,679134,0,0.0080,0.9784,0.0216,0.0000 3,aih-tih-sc-6ff823-R1_A23WJ53LT4_1,CCACAGCCTT-GCTATTGAAG,33984061,33266810,717251,0,0.0087,0.9789,0.0211,0.0000 3,aih-tih-sc-284856-R1_A23WJ53LT4_1,ACCGAATAGA-TCAGCATCCG,8707594,8527711,179883,0,0.0022,0.9793,0.0207,0.0000 3,aih-tih-sc-4c132f-R1_A23WJ53LT4_1,CGGACGATTC-TAGGTGGTGG,42465152,41727166,737986,0,0.0109,0.9826,0.0174,0.0000 3,aih-tih-sc-835699-R1_A23WJ53LT4_1,TTACTTCGTG-AAGATCGGAT,53138427,52131483,1006944,0,0.0136,0.9811,0.0189,0.0000 3,aih-tih-sc-488877-R1_A23WJ53LT4_1,ATTCGGCTTA-TTAACGTCCG,45562895,44733458,829437,0,0.0117,0.9818,0.0182,0.0000 3,aih-tih-sc-a19eaa-R1_A23WJ53LT4_1,CGCGGTATCT-ATTACCGATC,52406614,51475943,930671,0,0.0134,0.9822,0.0178,0.0000 3,aih-tih-sc-da460d-R1_A23WJ53LT4_1,TATCCGCGTC-GTTGCATCGT,52996031,51902178,1093853,0,0.0136,0.9794,0.0206,0.0000 3,aih-tih-sc-cab2fc-R1_A23WJ53LT4_1,AGGATGTCCA-ACTGGACGTT,58746946,57506995,1239951,0,0.0150,0.9789,0.0211,0.0000 3,aih-tih-sc-4e749e-R1_A23WJ53LT4_1,GCCAGCTATC-TTGTTCGTGT,51256962,50271362,985600,0,0.0131,0.9808,0.0192,0.0000 3,aih-tih-sc-38a0a3-R1_A23WJ53LT4_1,CTTACGAACT-ACGGACTGAG,54688976,53586259,1102717,0,0.0140,0.9798,0.0202,0.0000 3,aih-tih-sc-0419d4-R1_A23WJ53LT4_1,CAAGACTCAA-CACCGTCATA,23969318,23456944,512374,0,0.0061,0.9786,0.0214,0.0000 3,aih-tih-sc-cf89e7-R1_A23WJ53LT4_1,TCGACGGCAA-GTAGTTGTGT,11692729,11465639,227090,0,0.0030,0.9806,0.0194,0.0000 3,aih-tih-sc-387c73-R1_A23WJ53LT4_1,TCAGTTCGAT-CTGAGTCCTT,40331550,39587203,744347,0,0.0103,0.9815,0.0185,0.0000 3,aih-tih-sc-2905df-R1_A23WJ53LT4_1,CTAACCTCAA-TCACAGTTGC,39635074,38812403,822671,0,0.0101,0.9792,0.0208,0.0000 3,aih-tih-sc-4d6599-R1_A23WJ53LT4_1,GACCTACTAT-ATTGTAAGCG,47965698,47025551,940147,0,0.0123,0.9804,0.0196,0.0000 3,aih-tih-sc-431fe7-R1_A23WJ53LT4_1,ACGAGACGTC-CGGTCTCTCT,25743445,25203127,540318,0,0.0066,0.9790,0.0210,0.0000 3,aih-tih-sc-fee548-R1_A23WJ53LT4_1,TATGGCAAGC-AACAGCAATG,35662696,34953992,708704,0,0.0091,0.9801,0.0199,0.0000 3,aih-tih-sc-f29b4f-R1_A23WJ53LT4_1,ACTCCGAAGC-TCCGTGTTGC,23647333,23240725,406608,0,0.0061,0.9828,0.0172,0.0000 3,aih-tih-sc-7de750-R1_A23WJ53LT4_1,AATCTGCAGT-TGCGAAGTGA,40185436,39489679,695757,0,0.0103,0.9827,0.0173,0.0000 3,aih-tih-sc-33eb27-R1_A23WJ53LT4_1,AGTTCAGGCG-CACAGCTATT,50956714,50010197,946517,0,0.0130,0.9814,0.0186,0.0000 3,aih-tih-sc-6832bb-R1_A23WJ53LT4_1,CGCCAAGGTA-GATAGTGTTC,38304930,37542446,762484,0,0.0098,0.9801,0.0199,0.0000 3,aih-tih-sc-3cac57-R1_A23WJ53LT4_1,CCTGACATCT-TAGCTACCAG,57938810,56450063,1488747,0,0.0148,0.9743,0.0257,0.0000 3,aih-tih-sc-98fc22-R1_A23WJ53LT4_1,CGAGCGTAGT-TGCTCACGCA,51726850,50807419,919431,0,0.0132,0.9822,0.0178,0.0000 3,aih-tih-sc-ce4cdc-R1_A23WJ53LT4_1,CTGGATTACT-AAGTGTGCTA,27743961,27283610,460351,0,0.0071,0.9834,0.0166,0.0000 3,aih-tih-sc-487f7f-R1_A23WJ53LT4_1,AGCAATTCAC-TCATCGTCTG,23852245,23409285,442960,0,0.0061,0.9814,0.0186,0.0000 3,aih-tih-sc-2482ef-R1_A23WJ53LT4_1,ATATTCTCGG-AGATGCTCCG,3863126,3773073,90053,0,0.0010,0.9767,0.0233,0.0000 3,aih-tih-sc-965752-R1_A23WJ53LT4_1,GACTCATCCA-GAACCAAGCG,53329824,52232916,1096908,0,0.0137,0.9794,0.0206,0.0000 3,FFPE_HD789_01_RNA_13_A23WJ53LT4_1,CATAAGCGAC-CCTCTTCAAG,57973722,56781416,1192306,0,0.0148,0.9794,0.0206,0.0000 3,aih-tih-sc-af602e-R1_A23WJ53LT4_1,CCTAAGCTGA-CGTCGCATCT,38455864,37649795,806069,0,0.0098,0.9790,0.0210,0.0000 3,aih-tih-sc-0992e4-R1_A23WJ53LT4_1,CGATGTCTTG-CCGAACGTTC,66889583,65593365,1296218,0,0.0171,0.9806,0.0194,0.0000 3,aih-tih-sc-5d3207-R1_A23WJ53LT4_1,GAGATGAGAG-GAATGGCGTT,20216041,19645542,570499,0,0.0052,0.9718,0.0282,0.0000 3,aih-tih-sc-8353c5-R1_A23WJ53LT4_1,TCACCATAAG-AAGTTCAGGA,30746127,30129780,616347,0,0.0079,0.9800,0.0200,0.0000 3,aih-tih-sc-1dd7a6-R1_A23WJ53LT4_1,ACTTCCGGCA-GACCAATTGT,48994700,48113784,880916,0,0.0125,0.9820,0.0180,0.0000 3,aih-tih-sc-3a9c1f-R1_A23WJ53LT4_1,AAGCGCTTAG-TGTCTGTGAC,37056457,36237379,819078,0,0.0095,0.9779,0.0221,0.0000 3,aih-tih-sc-9ee8d4-R1_A23WJ53LT4_1,AACAACACAG-GAACATTGGC,32978554,32313284,665270,0,0.0084,0.9798,0.0202,0.0000 3,aih-tih-sc-7d33b9-R1_A23WJ53LT4_1,AGACTAGATG-CGTAACACTA,40547100,39650607,896493,0,0.0104,0.9779,0.0221,0.0000 3,aih-tih-sc-6f889c-R1_A23WJ53LT4_1,CCTCTATAGA-GTACTTCCAA,16551129,16178818,372311,0,0.0042,0.9775,0.0225,0.0000 3,aih-tih-sc-41b5f1-R1_A23WJ53LT4_1,TACGCTACTT-TTAGCGTCTT,16415547,16082523,333024,0,0.0042,0.9797,0.0203,0.0000 3,aih-tih-sc-58b830-R1_A23WJ53LT4_1,CGCACTGGTA-TTGACCGTCT,27848435,27337804,510631,0,0.0071,0.9817,0.0183,0.0000 3,aih-tih-sc-9ab390-R1_A23WJ53LT4_1,AACTCTCTAC-ACGGCTTCTC,33214530,32409693,804837,0,0.0085,0.9758,0.0242,0.0000 3,aih-tih-sc-669302-R1_A23WJ53LT4_1,GCCACCTAGT-TGCGATGTAT,45275530,44195383,1080147,0,0.0116,0.9761,0.0239,0.0000 3,aih-tih-sc-408cca-R1_A23WJ53LT4_1,CTCCGCCATA-GCGTTCAGCA,31363994,30746253,617741,0,0.0080,0.9803,0.0197,0.0000 3,aih-tih-sc-09b6a3-R1_A23WJ53LT4_1,TGACACGATT-GCCTAGGAAG,29137514,28523578,613936,0,0.0075,0.9789,0.0211,0.0000 3,FFPE_V4_0002_RNA_0006_A23WJ53LT4_1,CAACTGCGCA-AGTGTATCCG,41153575,40198711,954864,0,0.0105,0.9768,0.0232,0.0000 3,aih-tih-sc-e4cfff-R1_A23WJ53LT4_1,GCAATCTGCT-ACGAACCAAG,32994552,32317879,676673,0,0.0084,0.9795,0.0205,0.0000 3,aih-tih-sc-804b22-R1_A23WJ53LT4_1,CTCTATTGAG-CACGCAAGTC,34428528,33374790,1053738,0,0.0088,0.9694,0.0306,0.0000 3,aih-tih-sc-19e09e-R1_A23WJ53LT4_1,CACTTACGGC-GCTGGAGAAG,28545166,27964892,580274,0,0.0073,0.9797,0.0203,0.0000 3,aih-tih-sc-c8485b-R1_A23WJ53LT4_1,TCAGCATCTA-CCAGTGTACG,48922028,47944419,977609,0,0.0125,0.9800,0.0200,0.0000 3,aih-tih-sc-693ffe-R1_A23WJ53LT4_1,GTTGCATCAA-GTTGATGCGA,36233121,35565510,667611,0,0.0093,0.9816,0.0184,0.0000 3,aih-tih-sc-06a169-R1_A23WJ53LT4_1,ATGACAGCAC-CGCTTGTTAT,34661420,33849136,812284,0,0.0089,0.9766,0.0234,0.0000 3,aih-tih-sc-f2a1b0-R1_A23WJ53LT4_1,TAGCGACGGA-GTAACGTTCA,421210,410546,10664,0,0.0001,0.9747,0.0253,0.0000 3,aih-tih-sc-cdd9d2-R1_A23WJ53LT4_1,GTATGCCACA-CCGAGTCTTC,57489427,56417708,1071719,0,0.0147,0.9814,0.0186,0.0000 3,aih-tih-sc-96af5b-R1_A23WJ53LT4_1,AGTATCCGAT-TATTGCGCTA,51108905,49788319,1320586,0,0.0131,0.9742,0.0258,0.0000 3,aih-tih-sc-b107e7-R1_A23WJ53LT4_1,AACGAAGATC-TGTGGTCTAA,59666432,58400105,1266327,0,0.0153,0.9788,0.0212,0.0000 3,aih-tih-sc-3a13e9-R1_A23WJ53LT4_1,CCTCCTGTGA-CACGTCTACG,63318023,61488619,1829404,0,0.0162,0.9711,0.0289,0.0000 3,aih-tih-sc-e33b0b-R1_A23WJ53LT4_1,TAGGCGAATG-AGTCCAGTGA,57543393,56355208,1188185,0,0.0147,0.9794,0.0206,0.0000 3,aih-tih-sc-6064dc-R1_A23WJ53LT4_1,AGTAAGGAGA-ATGCTTGGTC,21247932,20853608,394324,0,0.0054,0.9814,0.0186,0.0000 3,aih-tih-sc-1ffee4-R1_A23WJ53LT4_1,CCGAACAGAG-TGATACTCGC,33594131,32802369,791762,0,0.0086,0.9764,0.0236,0.0000 3,aih-tih-sc-87d1a3-R1_A23WJ53LT4_1,AGAACTAACG-TTATCGAGAG,39149684,38392030,757654,0,0.0100,0.9806,0.0194,0.0000 3,aih-tih-sc-66e7f5-R1_A23WJ53LT4_1,GAGCAGCTTG-TGCCAGTATT,26280578,25648636,631942,0,0.0067,0.9760,0.0240,0.0000 3,aih-tih-sc-3b54a2-R1_A23WJ53LT4_1,CCGATAGTAG-GAGTTGCATA,25799464,25041252,758212,0,0.0066,0.9706,0.0294,0.0000 3,aih-tih-sc-2d4b78-R1_A23WJ53LT4_1,GTGTCTACAG-ACACTAGCAT,40288731,39487692,801039,0,0.0103,0.9801,0.0199,0.0000 3,aih-tih-sc-4ca6a8-R1_A23WJ53LT4_1,GTACAGACCG-GTTCTAATGG,61171524,59868702,1302822,0,0.0157,0.9787,0.0213,0.0000 3,aih-tih-sc-00d05f-R1_A23WJ53LT4_1,GCCAACAGAC-CGTTCACGTT,28771451,28177138,594313,0,0.0074,0.9793,0.0207,0.0000 3,aih-tih-sc-6734d6-R1_A23WJ53LT4_1,CCTCGTTGGA-GACTGCGTTA,45657189,44619929,1037260,0,0.0117,0.9773,0.0227,0.0000 3,aih-tih-sc-d45d48-R1_A23WJ53LT4_1,AATAGGTAGG-TGGCTTATGG,23169095,22729782,439313,0,0.0059,0.9810,0.0190,0.0000 3,aih-tih-sc-ced210-R1_A23WJ53LT4_1,TATGCGTAGC-TCAGAGGCAC,40029005,39273913,755092,0,0.0102,0.9811,0.0189,0.0000 3,aih-tih-sc-951f98-R1_A23WJ53LT4_1,CCAGTCGTCA-CGCTAGGCTA,43251628,42377510,874118,0,0.0111,0.9798,0.0202,0.0000 3,aih-tih-sc-b675f7-R1_A23WJ53LT4_1,AGAAGACCTA-AACCGTAACA,46951666,45782009,1169657,0,0.0120,0.9751,0.0249,0.0000 3,aih-tih-sc-b7f13b-R1_A23WJ53LT4_1,CCGTGAGTTC-CTTGGTATGA,42443333,41616864,826469,0,0.0109,0.9805,0.0195,0.0000 3,aih-tih-sc-55b175-R1_A23WJ53LT4_1,TCAATTCCGA-TGTAGATCCG,50632332,49687890,944442,0,0.0130,0.9813,0.0187,0.0000 3,aih-tih-sc-2798bb-R1_A23WJ53LT4_1,CGGAACACAA-AACTCTACCG,51197490,50096210,1101280,0,0.0131,0.9785,0.0215,0.0000 3,aih-tih-sc-64cace-R1_A23WJ53LT4_1,CTATAACGGA-CGTGACATTC,9989811,9778725,211086,0,0.0026,0.9789,0.0211,0.0000 3,aih-tih-sc-550807-R1_A23WJ53LT4_1,AGATGTAAGG-CTGTACCAGG,21895067,21485126,409941,0,0.0056,0.9813,0.0187,0.0000 3,NTC_0001_0001_A23WJ53LT4_1,ATGCTTACTG-ACTGGTTCCG,7148,7043,105,0,0.0000,0.9853,0.0147,0.0000 3,Undetermined,,291127112,291127112,0,0,0.0745,1.0000,0.0000,0.0000