SampleID,Lanes,Index,# Reads,# Perfect Index Reads,# One Mismatch Index Reads,# Two Mismatch Index Reads,% Reads,% Perfect Index Reads,% One Mismatch Index Reads,% Two Mismatch Index Reads
FFPE_HD789_01_RNA_13_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",CATAAGCGAC-CCTCTTCAAG,464646530,454916845,9729685,0,0.0148,0.9791,0.0209,0.0
FFPE_V4_0002_RNA_0006_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",CAACTGCGCA-AGTGTATCCG,329793935,322120936,7672999,0,0.0105,0.9767,0.0233,0.0
NTC_0001_0001_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",ATGCTTACTG-ACTGGTTCCG,57079,56010,1069,0,0.0,0.9813,0.0187,0.0
Undetermined,"1,2,3,4,5,6,7,8",,2318593657,2318593657,0,0,0.0739,1.0,0.0,0.0
aih-tih-sc-00d05f-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",GCCAACAGAC-CGTTCACGTT,231381103,226555585,4825518,0,0.0074,0.9791,0.0209,0.0
aih-tih-sc-0419d4-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",CAAGACTCAA-CACCGTCATA,192511366,188343780,4167586,0,0.0061,0.9784,0.0216,0.0
aih-tih-sc-06a169-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",ATGACAGCAC-CGCTTGTTAT,278806935,272248324,6558611,0,0.0089,0.9765,0.0235,0.0
aih-tih-sc-0992e4-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",CGATGTCTTG-CCGAACGTTC,537460339,527006237,10454102,0,0.0171,0.9805,0.0195,0.0
aih-tih-sc-09b6a3-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",TGACACGATT-GCCTAGGAAG,234410946,229471522,4939424,0,0.0075,0.9789,0.0211,0.0
aih-tih-sc-0ce15f-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",TCGAACACGA-GCGAGGTTCT,172641423,169228771,3412652,0,0.0055,0.9802,0.0198,0.0
aih-tih-sc-12b72b-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",ACAACAGGCT-TCCACTGTTG,312302353,306610636,5691717,0,0.01,0.9818,0.0182,0.0
aih-tih-sc-1351d2-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",CCAGACCGAT-GCTACTTGCA,252997671,247456383,5541288,0,0.0081,0.9781,0.0219,0.0
aih-tih-sc-19e09e-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",CACTTACGGC-GCTGGAGAAG,229023384,224319724,4703660,0,0.0073,0.9795,0.0205,0.0
aih-tih-sc-1dd7a6-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",ACTTCCGGCA-GACCAATTGT,392403583,385266679,7136904,0,0.0125,0.9818,0.0182,0.0
aih-tih-sc-1ffee4-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",CCGAACAGAG-TGATACTCGC,270180010,263755376,6424634,0,0.0086,0.9762,0.0238,0.0
aih-tih-sc-2482ef-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",ATATTCTCGG-AGATGCTCCG,31118756,30389080,729676,0,0.001,0.9766,0.0234,0.0
aih-tih-sc-2798bb-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",CGGAACACAA-AACTCTACCG,410291253,401342349,8948904,0,0.0131,0.9782,0.0218,0.0
aih-tih-sc-284856-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",ACCGAATAGA-TCAGCATCCG,69950795,68496938,1453857,0,0.0022,0.9792,0.0208,0.0
aih-tih-sc-2905df-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",CTAACCTCAA-TCACAGTTGC,317567928,310923435,6644493,0,0.0101,0.9791,0.0209,0.0
aih-tih-sc-2a8dd7-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",CTTGCTATTC-TAGAGTCACG,408918966,400477286,8441680,0,0.013,0.9794,0.0206,0.0
aih-tih-sc-2ca847-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",AGGTAACAAC-GCACGATGCT,169633011,166398403,3234608,0,0.0054,0.9809,0.0191,0.0
aih-tih-sc-2d4b78-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",GTGTCTACAG-ACACTAGCAT,323841579,317380925,6460654,0,0.0103,0.98,0.02,0.0
aih-tih-sc-331e97-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",TTCTCTTAGC-TCCTCGAGCT,841936,825617,16319,0,0.0,0.9806,0.0194,0.0
aih-tih-sc-33eb27-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",AGTTCAGGCG-CACAGCTATT,409393669,401665603,7728066,0,0.0131,0.9811,0.0189,0.0
aih-tih-sc-387c73-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",TCAGTTCGAT-CTGAGTCCTT,324311741,318230031,6081710,0,0.0103,0.9812,0.0188,0.0
aih-tih-sc-38a0a3-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",CTTACGAACT-ACGGACTGAG,440074823,431185906,8888917,0,0.014,0.9798,0.0202,0.0
aih-tih-sc-3a13e9-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",CCTCCTGTGA-CACGTCTACG,509602240,494806402,14795838,0,0.0162,0.971,0.029,0.0
aih-tih-sc-3a9c1f-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",AAGCGCTTAG-TGTCTGTGAC,297985903,291369204,6616699,0,0.0095,0.9778,0.0222,0.0
aih-tih-sc-3b54a2-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",CCGATAGTAG-GAGTTGCATA,207925220,201768634,6156586,0,0.0066,0.9704,0.0296,0.0
aih-tih-sc-3cac57-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",CCTGACATCT-TAGCTACCAG,465131960,452972064,12159896,0,0.0148,0.9739,0.0261,0.0
aih-tih-sc-3e4d53-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",TCTCACCAGG-TTAACAGGTC,246404003,240694626,5709377,0,0.0079,0.9768,0.0232,0.0
aih-tih-sc-3eb8dd-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",TCCAACTGAA-TGTCCGTAGG,222746019,217677211,5068808,0,0.0071,0.9772,0.0228,0.0
aih-tih-sc-408cca-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",CTCCGCCATA-GCGTTCAGCA,251988991,247000555,4988436,0,0.008,0.9802,0.0198,0.0
aih-tih-sc-41b5f1-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",TACGCTACTT-TTAGCGTCTT,131902712,129210208,2692504,0,0.0042,0.9796,0.0204,0.0
aih-tih-sc-431fe7-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",ACGAGACGTC-CGGTCTCTCT,207209433,202800849,4408584,0,0.0066,0.9787,0.0213,0.0
aih-tih-sc-487f7f-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",AGCAATTCAC-TCATCGTCTG,191578225,187990925,3587300,0,0.0061,0.9813,0.0187,0.0
aih-tih-sc-488877-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",ATTCGGCTTA-TTAACGTCCG,366362130,359625381,6736749,0,0.0117,0.9816,0.0184,0.0
aih-tih-sc-4c132f-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",CGGACGATTC-TAGGTGGTGG,341544897,335621508,5923389,0,0.0109,0.9827,0.0173,0.0
aih-tih-sc-4ca6a8-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",GTACAGACCG-GTTCTAATGG,491193141,480746289,10446852,0,0.0157,0.9787,0.0213,0.0
aih-tih-sc-4d6599-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",GACCTACTAT-ATTGTAAGCG,384914970,377344905,7570065,0,0.0123,0.9803,0.0197,0.0
aih-tih-sc-4e749e-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",GCCAGCTATC-TTGTTCGTGT,411387814,403457404,7930410,0,0.0131,0.9807,0.0193,0.0
aih-tih-sc-4fd42c-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",GAACCGCATT-CATTATGCCT,535518717,525508507,10010210,0,0.0171,0.9813,0.0187,0.0
aih-tih-sc-550807-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",AGATGTAAGG-CTGTACCAGG,175782762,172494892,3287870,0,0.0056,0.9813,0.0187,0.0
aih-tih-sc-55b175-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",TCAATTCCGA-TGTAGATCCG,406662501,399078326,7584175,0,0.013,0.9814,0.0186,0.0
aih-tih-sc-560d56-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",ATGTTGCCAC-TAGAAGCCAT,186586260,182818604,3767656,0,0.0059,0.9798,0.0202,0.0
aih-tih-sc-58b830-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",CGCACTGGTA-TTGACCGTCT,224037815,219868925,4168890,0,0.0071,0.9814,0.0186,0.0
aih-tih-sc-5d3207-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",GAGATGAGAG-GAATGGCGTT,162660737,158070906,4589831,0,0.0052,0.9718,0.0282,0.0
aih-tih-sc-5e5452-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",TGGAGATCGA-CAGCGGTATG,136275485,132277966,3997519,0,0.0043,0.9707,0.0293,0.0
aih-tih-sc-606237-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",TCTAGCTGCG-ATAGGTAAGG,471949149,462605563,9343586,0,0.015,0.9802,0.0198,0.0
aih-tih-sc-6064dc-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",AGTAAGGAGA-ATGCTTGGTC,170191648,167010543,3181105,0,0.0054,0.9813,0.0187,0.0
aih-tih-sc-64cace-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",CTATAACGGA-CGTGACATTC,80124129,78411805,1712324,0,0.0026,0.9786,0.0214,0.0
aih-tih-sc-669302-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",GCCACCTAGT-TGCGATGTAT,364407089,355599381,8807708,0,0.0116,0.9758,0.0242,0.0
aih-tih-sc-66e7f5-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",GAGCAGCTTG-TGCCAGTATT,211830011,206728794,5101217,0,0.0068,0.9759,0.0241,0.0
aih-tih-sc-6734d6-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",CCTCGTTGGA-GACTGCGTTA,366057998,357646386,8411612,0,0.0117,0.977,0.023,0.0
aih-tih-sc-674b78-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",AGATTAGCGT-CGCCTTATAT,380490215,369781675,10708540,0,0.0121,0.9719,0.0281,0.0
aih-tih-sc-6832bb-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",CGCCAAGGTA-GATAGTGTTC,307425859,301220063,6205796,0,0.0098,0.9798,0.0202,0.0
aih-tih-sc-693ffe-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",GTTGCATCAA-GTTGATGCGA,290651092,285270662,5380430,0,0.0093,0.9815,0.0185,0.0
aih-tih-sc-6f889c-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",CCTCTATAGA-GTACTTCCAA,132939689,129924122,3015567,0,0.0042,0.9773,0.0227,0.0
aih-tih-sc-6fcd81-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",TTCCTCACGT-ACATGAGCCA,440342264,431910496,8431768,0,0.014,0.9809,0.0191,0.0
aih-tih-sc-6ff823-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",CCACAGCCTT-GCTATTGAAG,273830949,268038382,5792567,0,0.0087,0.9788,0.0212,0.0
aih-tih-sc-7cc8a0-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",AGTAGTGTTG-AACACCTCTT,452689421,443636211,9053210,0,0.0144,0.98,0.02,0.0
aih-tih-sc-7d33b9-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",AGACTAGATG-CGTAACACTA,326406934,319186625,7220309,0,0.0104,0.9779,0.0221,0.0
aih-tih-sc-7de750-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",AATCTGCAGT-TGCGAAGTGA,323230341,317630111,5600230,0,0.0103,0.9827,0.0173,0.0
aih-tih-sc-804b22-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",CTCTATTGAG-CACGCAAGTC,276737638,268161541,8576097,0,0.0088,0.969,0.031,0.0
aih-tih-sc-8353c5-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",TCACCATAAG-AAGTTCAGGA,246830518,241852384,4978134,0,0.0079,0.9798,0.0202,0.0
aih-tih-sc-835699-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",TTACTTCGTG-AAGATCGGAT,426609194,418451177,8158017,0,0.0136,0.9809,0.0191,0.0
aih-tih-sc-87d1a3-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",AGAACTAACG-TTATCGAGAG,314370016,308258313,6111703,0,0.01,0.9806,0.0194,0.0
aih-tih-sc-951f98-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",CCAGTCGTCA-CGCTAGGCTA,347873909,340843661,7030248,0,0.0111,0.9798,0.0202,0.0
aih-tih-sc-965752-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",GACTCATCCA-GAACCAAGCG,427698254,418867826,8830428,0,0.0136,0.9794,0.0206,0.0
aih-tih-sc-96af5b-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",AGTATCCGAT-TATTGCGCTA,410858415,399872934,10985481,0,0.0131,0.9733,0.0267,0.0
aih-tih-sc-98fc22-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",CGAGCGTAGT-TGCTCACGCA,417203162,409750149,7453013,0,0.0133,0.9821,0.0179,0.0
aih-tih-sc-9ab390-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",AACTCTCTAC-ACGGCTTCTC,266033663,259450921,6582742,0,0.0085,0.9753,0.0247,0.0
aih-tih-sc-9be8d4-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",TCGCGACACT-CGAGTAATGT,412388577,404384745,8003832,0,0.0131,0.9806,0.0194,0.0
aih-tih-sc-9ee8d4-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",AACAACACAG-GAACATTGGC,265001028,259632477,5368551,0,0.0084,0.9797,0.0203,0.0
aih-tih-sc-9f6030-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",CAGCAGGTCA-CACTTAGGTA,266065565,261545427,4520138,0,0.0085,0.983,0.017,0.0
aih-tih-sc-9faac1-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",TTACGCGCAT-CTTAACGACA,306746271,301095725,5650546,0,0.0098,0.9816,0.0184,0.0
aih-tih-sc-9fb608-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",TAACTTGGTC-GTCGTGAATC,320527034,314091966,6435068,0,0.0102,0.9799,0.0201,0.0
aih-tih-sc-a19eaa-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",CGCGGTATCT-ATTACCGATC,421900453,414367862,7532591,0,0.0135,0.9821,0.0179,0.0
aih-tih-sc-af602e-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",CCTAAGCTGA-CGTCGCATCT,309381709,302866810,6514899,0,0.0099,0.9789,0.0211,0.0
aih-tih-sc-b107e7-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",AACGAAGATC-TGTGGTCTAA,479819755,469654421,10165334,0,0.0153,0.9788,0.0212,0.0
aih-tih-sc-b675f7-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",AGAAGACCTA-AACCGTAACA,377533605,368027160,9506445,0,0.012,0.9748,0.0252,0.0
aih-tih-sc-b7f13b-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",CCGTGAGTTC-CTTGGTATGA,340839197,334157462,6681735,0,0.0109,0.9804,0.0196,0.0
aih-tih-sc-bec563-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",CGCACTTCGT-AATATGCCAG,417867746,409908769,7958977,0,0.0133,0.981,0.019,0.0
aih-tih-sc-c8485b-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",TCAGCATCTA-CCAGTGTACG,392934492,384978102,7956390,0,0.0125,0.9798,0.0202,0.0
aih-tih-sc-cab2fc-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",AGGATGTCCA-ACTGGACGTT,471640238,461625010,10015228,0,0.015,0.9788,0.0212,0.0
aih-tih-sc-cdd9d2-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",GTATGCCACA-CCGAGTCTTC,460302880,451568152,8734728,0,0.0147,0.981,0.019,0.0
aih-tih-sc-ce4cdc-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",CTGGATTACT-AAGTGTGCTA,222995194,219275700,3719494,0,0.0071,0.9833,0.0167,0.0
aih-tih-sc-ced210-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",TATGCGTAGC-TCAGAGGCAC,321702908,315616507,6086401,0,0.0103,0.9811,0.0189,0.0
aih-tih-sc-cf89e7-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",TCGACGGCAA-GTAGTTGTGT,93528621,91704201,1824420,0,0.003,0.9805,0.0195,0.0
aih-tih-sc-d45d48-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",AATAGGTAGG-TGGCTTATGG,185828070,182304191,3523879,0,0.0059,0.981,0.019,0.0
aih-tih-sc-d64bdd-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",ATAAGCGGAG-CTGTTCTACG,260651228,252359626,8291602,0,0.0083,0.9682,0.0318,0.0
aih-tih-sc-da460d-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",TATCCGCGTC-GTTGCATCGT,426370906,417520501,8850405,0,0.0136,0.9792,0.0208,0.0
aih-tih-sc-e33b0b-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",TAGGCGAATG-AGTCCAGTGA,462188484,452625670,9562814,0,0.0147,0.9793,0.0207,0.0
aih-tih-sc-e4cfff-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",GCAATCTGCT-ACGAACCAAG,265368881,259878947,5489934,0,0.0085,0.9793,0.0207,0.0
aih-tih-sc-f29b4f-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",ACTCCGAAGC-TCCGTGTTGC,189559232,186282162,3277070,0,0.006,0.9827,0.0173,0.0
aih-tih-sc-f2a1b0-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",TAGCGACGGA-GTAACGTTCA,3388009,3299924,88085,0,0.0001,0.974,0.026,0.0
aih-tih-sc-fee548-R1_A23WJ53LT4_1,"1,2,3,4,5,6,7,8",TATGGCAAGC-AACAGCAATG,285986683,280247809,5738874,0,0.0091,0.9799,0.0201,0.0