FastQCFastQC Report
Mon 8 Jun 2026
NTC_0001_0001_A23WJ53LT4_1_2.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameNTC_0001_0001_A23WJ53LT4_1_2.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences57079
Total Bases8.6 Mbp
Sequences flagged as poor quality0
Sequence length151
%GC97

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5088589.14837330717076No Hit
AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTACTGGTTCCGGTGTAGA4390.7691094798437254Illumina Single End PCR Primer 1 (97% over 34bp)
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGG2070.3626552672611643No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGG1580.2768093344312269No Hit
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC1400.24527409379982132No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGG1260.22074668441983916No Hit
GGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1140.1997231906655688No Hit
GGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1010.17694773909844252No Hit
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA850.14891641409274867No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGG820.14366054065418105No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGG800.14015662502846932No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGG710.12438900471276651No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)