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aih-tih-sc-af602e-R1_A23WJ53LT4_1.FusionInspector.fusions.abridged.tsv
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s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0019/A23WJ53LT4/nfcore_rnafusion__73d51683--20260607-225254/fusioninspector/aih-tih-sc-af602e-R1_A23WJ53LT4_1.FusionInspector.fusions.abridged.tsv
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13.3 KB
Workflow Run
dev_rna_exp0019_2-73d51683
Published
Jun 08, 2026 4:54 AM

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#FusionName JunctionReadCount SpanningFragCount est_J est_S LeftGene LeftLocalBreakpoint LeftBreakpoint RightGene RightLocalBreakpoint RightBreakpoint SpliceType LargeAnchorSupport NumCounterFusionLeft NumCounterFusionRight FAR_left FAR_right LeftBreakDinuc LeftBreakEntropy RightBreakDinuc RightBreakEntropy FFPM microh_brkpt_dist num_microh_near_brkpt
PCDHA3--PCDHAC1 255 0 127.50 0.00 PCDHA3^ENSG00000255408.4 3564 chr5:140803591:+ PCDHAC1^ENSG00000248383.5 13742 chr5:140978949:+ INCL_NON_REF_SPLICE YES 61 37 4.13 6.74 GT 1.9086 AG 1.3996 0.4305 1253 0
PCDHA3--PCDHAC2 255 0 127.50 0.00 PCDHA3^ENSG00000255408.4 3564 chr5:140803591:+ PCDHAC2^ENSG00000243232.6 12606 chr5:140978949:+ INCL_NON_REF_SPLICE YES 61 111 4.13 2.29 GT 1.9086 AG 1.3996 0.4305 1217 0
IKBKG--GDI1 216 0 216.00 0.00 IKBKG^ENSG00000269335.6 9266 chrX:154558650:+ GDI1^ENSG00000203879.12 21937 chrX:154441096:+ ONLY_REF_SPLICE YES 335 711 0.65 0.30 GT 1.6729 AG 1.9656 0.7293 1126 0
TVP23C--CDRT4 202 1 202.00 0.65 TVP23C^ENSG00000175106.17 14926 chr17:15503098:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- INCL_NON_REF_SPLICE YES 119 13 1.70 14.57 GT 1.9329 AG 1.9899 0.6842 1215 0
TVP23C--CDRT4 87 1 87.00 0.28 TVP23C^ENSG00000175106.17 7982 chr17:15540433:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 736 13 0.12 6.36 GT 1.8323 AG 1.9899 0.2946 2126 0
TVP23C--CDRT4 50 0 50.00 0.00 TVP23C^ENSG00000175106.17 14926 chr17:15503098:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- INCL_NON_REF_SPLICE YES 119 65 0.42 0.77 GT 1.9329 AG 1.6402 0.1688 137 0
TVP23C--CDRT4 31 0 31.00 0.00 TVP23C^ENSG00000175106.17 7982 chr17:15540433:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- ONLY_REF_SPLICE YES 736 65 0.04 0.48 GT 1.8323 AG 1.6402 0.1047 1363 0
TVP23C--CDRT4 10 1 10.00 0.03 TVP23C^ENSG00000175106.17 12676 chr17:15516419:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 35 13 0.33 0.86 GT 1.8892 AG 1.9899 0.0339 1949 0
TVP23C--CDRT4 6 1 6.00 0.02 TVP23C^ENSG00000175106.17 14926 chr17:15503098:- CDRT4^ENSG00000239704.11 21051 chr17:15453085:- INCL_NON_REF_SPLICE YES 119 1 0.07 4.00 GT 1.9329 AG 1.8892 0.0204 1153 0
TVP23C--CDRT4 5 1 5.00 0.02 TVP23C^ENSG00000175106.17 7982 chr17:15540433:- CDRT4^ENSG00000239704.11 21051 chr17:15453085:- ONLY_REF_SPLICE YES 736 1 0.01 3.50 GT 1.8323 AG 1.8892 0.017 1044 0
TVP23C--CDRT4 4 0 4.00 0.00 TVP23C^ENSG00000175106.17 5682 chr17:15547098:- CDRT4^ENSG00000239704.11 22667 chr17:15440242:- INCL_NON_REF_SPLICE YES 676 40 0.01 0.12 GA 1.9086 AA 1.7056 0.0135 1985 0
TVP23C--CDRT4 2 0 2.00 0.00 TVP23C^ENSG00000175106.17 6853 chr17:15545785:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 442 13 0.01 0.21 GT 1.9086 AG 1.9899 0.0068 1774 0
TVP23C--CDRT4 2 0 2.00 0.00 TVP23C^ENSG00000175106.17 12676 chr17:15516419:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- ONLY_REF_SPLICE YES 35 65 0.08 0.05 GT 1.8892 AG 1.6402 0.0068 873 0
PCDHGB2--PCDHGA10 191 0 23.88 0.00 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA10^ENSG00000253846.2 12051 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 22 192.00 8.35 GT 1.7819 AG 1.3383 0.0806 1890 0
PCDHGB2--PCDHGA11 191 0 23.88 0.00 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA11^ENSG00000253873.6 11222 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 16 192.00 11.29 GT 1.7819 AG 1.3383 0.0806 1018 0
PCDHGB2--PCDHGA12 191 0 23.88 0.00 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA12^ENSG00000253159.3 10305 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 49 192.00 3.84 GT 1.7819 AG 1.3383 0.0806 1413 0
PCDHGB2--PCDHGA8 191 0 23.88 0.00 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA8^ENSG00000253767.3 14069 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 3 192.00 48.00 GT 1.7819 AG 1.3383 0.0806 1419 0
PCDHGB2--PCDHGA9 191 0 23.88 0.00 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA9^ENSG00000261934.2 10157 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 29 192.00 6.40 GT 1.7819 AG 1.3383 0.0806 1493 0
PCDHGB2--PCDHGC3 191 0 23.88 0.00 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGC3^ENSG00000240184.7 10438 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 485 192.00 0.40 GT 1.7819 AG 1.3383 0.0806 1210 0
PCDHGB2--PCDHGC4 191 0 23.88 0.00 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGC4^ENSG00000242419.5 10382 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 0 192.00 192.00 GT 1.7819 AG 1.3383 0.0806 1585 0
PCDHGB2--PCDHGC5 191 0 23.88 0.00 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGC5^ENSG00000240764.4 10438 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 7 192.00 24.00 GT 1.7819 AG 1.3383 0.0806 1206 0
NUDT4--MRPL42 176 3 176.00 2.95 NUDT4^ENSG00000173598.14 1539 chr12:93378421:+ MRPL42^ENSG00000198015.14 27164 chr12:93501176:+ ONLY_REF_SPLICE YES 845 345 0.21 0.52 GT 1.3996 AG 1.9899 0.6042 917 0
NUDT4--MRPL42 1 3 1.00 0.02 NUDT4^ENSG00000173598.14 1811 chr12:93378693:+ MRPL42^ENSG00000198015.14 27164 chr12:93501176:+ ONLY_REF_SPLICE YES 777 345 0.01 0.01 GT 1.7056 AG 1.9899 0.0035 900 0
NUDT4--MRPL42 1 3 1.00 0.02 NUDT4^ENSG00000173598.14 1908 chr12:93378790:+ MRPL42^ENSG00000198015.14 27164 chr12:93501176:+ ONLY_REF_SPLICE YES 785 345 0.01 0.01 GT 1.6402 AG 1.9899 0.0035 913 0
NUDT4--MRPL42 1 3 1.00 0.02 NUDT4^ENSG00000173598.14 1906 chr12:93378788:+ MRPL42^ENSG00000198015.14 27164 chr12:93501176:+ ONLY_REF_SPLICE YES 785 345 0.01 0.01 GC 1.3996 AG 1.9899 0.0035 913 0
SMARCC2--AL157400.3 134 1 134.00 1.00 SMARCC2^ENSG00000139613.12 14832 chr12:56171271:- AL157400.3^ENSG00000235100.4 31157 chr10:89668251:- ONLY_REF_SPLICE YES 734 0 0.19 136.00 GT 1.9219 AG 1.8256 0.4558 618 0
BAD--MACROD1 110 0 110.00 0.00 BAD^ENSG00000002330.14 1523 chr11:64284182:- MACROD1^ENSG00000133315.12 10976 chr11:64152393:- ONLY_REF_SPLICE YES 261 44 0.42 2.47 GT 1.9329 AG 1.9329 0.3714 2346 0
WRAP73--DYNLRB1 86 0 43.00 0.00 WRAP73^ENSG00000116213.16 4117 chr1:3646666:- DYNLRB1^ENSG00000125971.17 21235 chr20:34534628:+ ONLY_REF_SPLICE YES 88 941 0.98 0.09 GT 1.9086 AG 1.9086 0.1452 775 0
WRAP73--DYNLRB1 6 0 3.00 0.00 WRAP73^ENSG00000116213.16 2222 chr1:3649931:- DYNLRB1^ENSG00000125971.17 21235 chr20:34534628:+ ONLY_REF_SPLICE YES 149 941 0.05 0.01 GT 1.9329 AG 1.9086 0.0101 1114 0
WRAP73--ITCH 86 0 43.00 0.00 WRAP73^ENSG00000116213.16 4117 chr1:3646666:- ITCH^ENSG00000078747.16 56921 chr20:34534628:+ ONLY_REF_SPLICE YES 88 733 0.98 0.12 GT 1.9086 AG 1.9086 0.1452 775 0
WRAP73--ITCH 6 0 3.00 0.00 WRAP73^ENSG00000116213.16 2222 chr1:3649931:- ITCH^ENSG00000078747.16 56921 chr20:34534628:+ ONLY_REF_SPLICE YES 149 733 0.05 0.01 GT 1.9329 AG 1.9086 0.0101 1114 0
RAB5IF--DLGAP4 77 0 77.00 0.00 RAB5IF^ENSG00000101084.18 3896 chr20:36609730:+ DLGAP4^ENSG00000080845.18 28762 chr20:36524250:+ ONLY_REF_SPLICE YES 618 604 0.13 0.13 GT 1.6729 AG 1.9656 0.26 1919 0
RAB5IF--DLGAP4 3 0 3.00 0.00 RAB5IF^ENSG00000101084.18 2310 chr20:36607737:+ DLGAP4^ENSG00000080845.18 31286 chr20:36527283:+ INCL_NON_REF_SPLICE YES 494 10 0.01 0.36 CT 1.7465 TG 1.7465 0.0101 135 0
RAB5IF--DLGAP4 1 0 1.00 0.00 RAB5IF^ENSG00000101084.18 3896 chr20:36609730:+ DLGAP4^ENSG00000080845.18 29854 chr20:36525851:+ ONLY_REF_SPLICE YES 618 587 0.00 0.00 GT 1.6729 AG 1.8323 0.0034 2021 0
RAB5IF--DLGAP4 1 0 1.00 0.00 RAB5IF^ENSG00000101084.18 2391 chr20:36607818:+ DLGAP4^ENSG00000080845.18 28762 chr20:36524250:+ ONLY_REF_SPLICE YES 449 604 0.00 0.00 GT 1.8892 AG 1.9656 0.0034 1094 0
ANO6--NINJ2 74 1 74.00 0.97 ANO6^ENSG00000177119.17 1405 chr12:45216391:+ NINJ2^ENSG00000171840.12 42435 chr12:566178:- ONLY_REF_SPLICE YES 913 79 0.08 0.95 GT 1.8892 AG 1.8892 0.2531 1842 0
ANO6--NINJ2 2 1 2.00 0.03 ANO6^ENSG00000177119.17 2511 chr12:45228273:+ NINJ2^ENSG00000171840.12 42435 chr12:566178:- ONLY_REF_SPLICE YES 881 79 0.00 0.05 GT 1.9899 AG 1.8892 0.0069 2330 0
TLK2--AC240565.1 71 1 65.79 1.00 TLK2^ENSG00000146872.18 17137 chr17:62560126:+ AC240565.1^ENSG00000280136.2 41242 chr17:106864:- ONLY_REF_SPLICE YES 363 35 0.20 2.03 GT 1.8892 AG 1.8892 0.2255 1734 0
NUDT4--SOCS2 64 0 64.00 0.00 NUDT4^ENSG00000173598.14 1539 chr12:93378421:+ SOCS2^ENSG00000120833.14 22168 chr12:93572685:+ ONLY_REF_SPLICE YES 845 6 0.08 9.29 GT 1.3996 AG 1.8295 0.2161 546 0
PUM2--CEP104 60 0 60.00 0.00 PUM2^ENSG00000055917.16 8259 chr2:20318537:- CEP104^ENSG00000116198.14 34407 chr1:3852421:- ONLY_REF_SPLICE YES 777 197 0.08 0.31 GT 1.9329 AG 1.7819 0.2026 4011 0
PUM2--CEP104 3 0 3.00 0.00 PUM2^ENSG00000055917.16 8259 chr2:20318537:- CEP104^ENSG00000116198.14 36143 chr1:3848781:- ONLY_REF_SPLICE YES 777 410 0.01 0.01 GT 1.9329 AG 1.7968 0.0101 2733 0
PUM2--CEP104 2 0 2.00 0.00 PUM2^ENSG00000055917.16 8259 chr2:20318537:- CEP104^ENSG00000116198.14 33279 chr1:3856001:- ONLY_REF_SPLICE YES 777 111 0.00 0.03 GT 1.9329 AG 1.8892 0.0068 4991 0
PUM2--CEP104 1 0 1.00 0.00 PUM2^ENSG00000055917.16 2317 chr2:20350597:- CEP104^ENSG00000116198.14 34407 chr1:3852421:- ONLY_REF_SPLICE YES 542 197 0.00 0.01 GT 1.6895 AG 1.7819 0.0034 2244 0
PUM2--CEP104 1 0 1.00 0.00 PUM2^ENSG00000055917.16 6101 chr2:20327310:- CEP104^ENSG00000116198.14 34407 chr1:3852421:- ONLY_REF_SPLICE YES 787 197 0.00 0.01 GT 1.4716 AG 1.7819 0.0034 3350 0
TLK2P1--AC110079.1 58 0 51.21 0.00 TLK2P1^ENSG00000226049.3 1830 chr17:34039043:- AC110079.1^ENSG00000260404.3 8316 chr4:118595912:+ INCL_NON_REF_SPLICE YES 46 38 1.26 1.51 GT 1.7465 AG 1.8892 0.1729 311 0
AC092807.3--DDAH1 56 2 56.00 1.96 AC092807.3^ENSG00000282057.1 5553 chr1:85496166:- DDAH1^ENSG00000153904.21 16212 chr1:85358847:- ONLY_REF_SPLICE YES 0 64 59.00 0.91 GT 1.5628 AG 1.8062 0.1957 3011 0
AC092807.3--DDAH1 11 0 11.00 0.00 AC092807.3^ENSG00000282057.1 1267 chr1:85577984:- DDAH1^ENSG00000153904.21 16212 chr1:85358847:- ONLY_REF_SPLICE YES 1 64 6.00 0.18 GT 1.8062 AG 1.8062 0.0371 2484 0
AC092807.3--DDAH1 1 2 1.00 0.04 AC092807.3^ENSG00000282057.1 9402 chr1:85488291:- DDAH1^ENSG00000153904.21 16212 chr1:85358847:- ONLY_REF_SPLICE YES 0 64 4.00 0.06 GT 1.8892 AG 1.8062 0.0035 2892 0
CRPPA-AS1--PUM1 56 0 56.00 0.00 CRPPA-AS1^ENSG00000229688.8 2357 chr7:16216569:+ PUM1^ENSG00000134644.16 34818 chr1:30952363:- ONLY_REF_SPLICE YES 0 524 57.00 0.11 GT 1.7465 AG 1.9086 0.1891 1584 0
ATP11A--MCF2L 53 0 53.00 0.00 ATP11A^ENSG00000068650.18 10149 chr13:112816211:+ MCF2L^ENSG00000126217.21 63251 chr13:113014763:+ ONLY_REF_SPLICE YES 413 870 0.13 0.06 GT 1.7968 AG 1.8892 0.1789 6467 0
ATP11A--MCF2L 5 0 5.00 0.00 ATP11A^ENSG00000068650.18 5741 chr13:112785257:+ MCF2L^ENSG00000126217.21 63251 chr13:113014763:+ ONLY_REF_SPLICE YES 503 870 0.01 0.01 GT 1.9656 AG 1.8892 0.0169 3181 0
SEM1--PUM1 52 0 52.00 0.00 SEM1^ENSG00000127922.9 24402 chr7:96558117:- PUM1^ENSG00000134644.16 57064 chr1:30952363:- ONLY_REF_SPLICE YES 0 525 53.00 0.10 GT 1.9656 AG 1.9086 0.1756 1613 0
SLC25A25--CLPS 48 0 48.00 0.00 SLC25A25^ENSG00000148339.12 1380 chr9:128068580:+ CLPS^ENSG00000137392.10 18447 chr6:35795277:- ONLY_REF_SPLICE YES 87 199 0.56 0.24 GT 1.7465 AG 1.9656 0.1621 4700 0
SLC25A25--CLPS 21 0 21.00 0.00 SLC25A25^ENSG00000148339.12 1380 chr9:128068580:+ CLPS^ENSG00000137392.10 17871 chr6:35795853:- ONLY_REF_SPLICE YES 87 100 0.25 0.22 GT 1.7465 AG 1.8892 0.0709 4741 0
FKBP5--DNAH17 34 0 34.00 0.00 FKBP5^ENSG00000096060.15 3436 chr6:35688804:- DNAH17^ENSG00000187775.17 77785 chr17:78463077:- ONLY_REF_SPLICE YES 169 29 0.21 1.17 GT 1.3996 AG 1.8892 0.1148 3810 0
FKBP5--DNAH17 6 0 6.00 0.00 FKBP5^ENSG00000096060.15 2297 chr6:35720328:- DNAH17^ENSG00000187775.17 77785 chr17:78463077:- ONLY_REF_SPLICE YES 2 29 2.33 0.23 GT 1.9656 AG 1.8892 0.0203 3899 0
GANC--CAPN3 32 3 32.00 1.33 GANC^ENSG00000214013.9 25738 chr15:42340754:+ CAPN3^ENSG00000092529.25 43986 chr15:42384483:+ ONLY_REF_SPLICE YES 117 35 0.31 1.00 GT 1.9329 AG 1.8062 0.1125 5440 0
GANC--CAPN3 18 3 18.00 0.75 GANC^ENSG00000214013.9 35562 chr15:42354453:+ CAPN3^ENSG00000092529.25 43986 chr15:42384483:+ INCL_NON_REF_SPLICE YES 0 35 22.00 0.61 GT 1.4716 AG 1.8062 0.0633 1489 0
GANC--CAPN3 9 3 9.00 0.38 GANC^ENSG00000214013.9 35562 chr15:42354453:+ CAPN3^ENSG00000092529.25 41329 chr15:42359782:+ INCL_NON_REF_SPLICE YES 0 33 13.00 0.38 GT 1.4716 AG 1.7465 0.0317 599 0
GANC--CAPN3 5 3 5.00 0.21 GANC^ENSG00000214013.9 35562 chr15:42354453:+ CAPN3^ENSG00000092529.25 41622 chr15:42360075:+ INCL_NON_REF_SPLICE YES 0 43 9.00 0.20 GT 1.4716 AG 1.8892 0.0176 525 0
GANC--CAPN3 5 3 5.00 0.21 GANC^ENSG00000214013.9 33233 chr15:42352124:+ CAPN3^ENSG00000092529.25 43986 chr15:42384483:+ INCL_NON_REF_SPLICE YES 82 35 0.11 0.25 GT 1.8892 AG 1.8062 0.0176 1403 0
GANC--CAPN3 3 3 3.00 0.13 GANC^ENSG00000214013.9 35562 chr15:42354453:+ CAPN3^ENSG00000092529.25 41344 chr15:42359797:+ INCL_NON_REF_SPLICE YES 0 33 7.00 0.21 GT 1.4716 AG 1.8295 0.0105 592 0
KCTD1--AC090772.2 29 0 29.00 0.00 KCTD1^ENSG00000134504.14 10011 chr18:26501072:- AC090772.2^ENSG00000265204.1 22454 chr18:24077259:- ONLY_REF_SPLICE YES 341 1 0.09 15.00 GT 1.9086 AG 1.9086 0.0979 4923 0
PRPF40B--SPATS2 28 0 28.00 0.00 PRPF40B^ENSG00000110844.14 19083 chr12:49637824:+ SPATS2^ENSG00000123352.18 37146 chr12:49484590:+ ONLY_REF_SPLICE YES 295 360 0.10 0.08 GT 1.9219 AG 1.9086 0.0945 1926 0
PIWIL2--NOS2P2 16 0 16.00 0.00 PIWIL2^ENSG00000197181.12 17716 chr8:22314429:+ NOS2P2^ENSG00000167494.9 32183 chr17:18501522:- ONLY_REF_SPLICE YES 31 8 0.53 1.89 GT 1.7232 AG 1.8323 0.054 2223 0
NUS1--AC114501.3 11 0 11.00 0.00 NUS1^ENSG00000153989.8 1617 chr6:117676085:+ AC114501.3^ENSG00000238124.1 12962 chr7:65463373:+ ONLY_REF_SPLICE YES 276 0 0.04 12.00 GT 1.8323 AG 1.9086 0.0371 7480 0
FAM242C--CBX5 10 0 10.00 0.00 FAM242C^ENSG00000250432.5 2385 chr12:54121304:- CBX5^ENSG00000094916.16 15232 chr12:54257692:- ONLY_REF_SPLICE YES 0 237 11.00 0.05 GT 1.8062 AG 1.8062 0.0338 2017 0
68 rows