AIH curated blacklist: matched 14 fusion rows (breakpoint_ID in qualified set)
================================================================================
ARRIBA FILTERING SUMMARY
================================================================================
Total fusions: 398
Pass (FILTER=PASS): 59 (14.8%)
Fail (FILTER=FAIL): 339 (85.2%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 14
All 14 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 58
confidence_below_min(medium<high): 56
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 36
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 27
confidence_below_min(low<high): 25
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 24
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 19
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 14
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 14
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 12
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 10
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 8
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 7
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 6
confidence_below_min(medium<high);aih_curated_blacklist: 5
Breakdown by confidence:
high: 59 pass, 7 fail (total: 66)
low: 0 pass, 171 fail (total: 171)
medium: 0 pass, 161 fail (total: 161)
Arriba filter: 398 rows -> 59 PASS; wrote FFPE_HD789_01_RNA_13_A23WJ53LT4_1.arriba.fusions.filtered.tsv and FFPE_HD789_01_RNA_13_A23WJ53LT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: FFPE_HD789_01_RNA_13_A23WJ53LT4_1.arriba.fusions.filter_summary.txt