Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ed/621df3e42b8038b1c798a570650bf6/aih-tih-sc-4e749e-R1_A23WJ53LT4_1.star_alignment.Aligned.sortedByCoord.out.cram
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5f/0a6f3ece8d3649d5450342f2ac40cf/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5f/0a6f3ece8d3649d5450342f2ac40cf/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.bai: No such file or directory
ls: *.csi: No such file or directory