AIH curated blacklist: matched 10 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 236
Pass (FILTER=PASS): 51 (21.6%)
Fail (FILTER=FAIL): 185 (78.4%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 10
All 10 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 46
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 24
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 23
confidence_below_min(low<high): 16
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 12
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 11
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 10
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 9
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 9
confidence_below_min(medium<high);aih_curated_blacklist: 6
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 4
total_reads_below_min(6.0<8.0): 2
total_reads_below_min(4.0<8.0): 2
confidence_below_min(low<high);total_reads_below_min(7.0<8.0): 2
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 1
Breakdown by confidence:
high: 51 pass, 9 fail (total: 60)
low: 0 pass, 102 fail (total: 102)
medium: 0 pass, 74 fail (total: 74)
Arriba filter: 236 rows -> 51 PASS; wrote aih-tih-sc-9be8d4-R1_A23WJ53LT4_1.arriba.fusions.filtered.tsv and aih-tih-sc-9be8d4-R1_A23WJ53LT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: aih-tih-sc-9be8d4-R1_A23WJ53LT4_1.arriba.fusions.filter_summary.txt