AIH curated blacklist: matched 9 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 225
Pass (FILTER=PASS): 12 (5.3%)
Fail (FILTER=FAIL): 213 (94.7%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 9
All 9 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 76
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 23
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 21
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 14
confidence_below_min(low<high): 13
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 11
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 10
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 9
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 7
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 5
confidence_below_min(medium<high);aih_curated_blacklist: 4
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 3
total_reads_below_min(4.0<8.0): 2
total_reads_below_min(3.0<8.0): 2
confidence_below_min(low<high);aih_curated_blacklist: 2
Breakdown by confidence:
high: 12 pass, 5 fail (total: 17)
low: 0 pass, 87 fail (total: 87)
medium: 0 pass, 121 fail (total: 121)
Arriba filter: 225 rows -> 12 PASS; wrote aih-tih-sc-2798bb-R1_A23WJ53LT4_1.arriba.fusions.filtered.tsv and aih-tih-sc-2798bb-R1_A23WJ53LT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: aih-tih-sc-2798bb-R1_A23WJ53LT4_1.arriba.fusions.filter_summary.txt