[W::hts_idx_load3] The index file is older than the data file: aih-tih-sc-09b6a3-R1_A23WJ53LT4_1.Aligned.sortedByCoord.out.bam.bai
Reading reference bed file:  ref_annot.bed  ...  Done
Load BAM file ...  Done

===================================================================
Total splicing  Events:	196450831
Known Splicing Events:	194484376
Partial Novel Splicing Events:	1260943
Novel Splicing Events:	631330
Filtered Splicing Events:	74182

Total splicing  Junctions:	319436
Known Splicing Junctions:	215240
Partial Novel Splicing Junctions:	63997
Novel Splicing Junctions:	40199

===================================================================
Create BED file ...
Create Interact file ...