File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/95/33825f95748702178f9a53ab170251/.command.log
Size
1.1 KB
Attempt
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/33/0a4d5d14110c7f27d6a5c54c9e1146/aih-tih-sc-33eb27-R1_A23WJ53LT4_1
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/95/33825f95748702178f9a53ab170251/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/58/d1704d95bdbf30f86d3f98a87aad04/aih-tih-sc-33eb27-R1_A23WJ53LT4_1.sample_qc.tsv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/95/33825f95748702178f9a53ab170251/.command.run
==> STAGING COMPLETE (4 inputs)

Processing Kallisto file: aih-tih-sc-33eb27-R1_A23WJ53LT4_1/abundance.h5
Successfully converted aih-tih-sc-33eb27-R1_A23WJ53LT4_1/abundance.h5 to aih-tih-sc-33eb27-R1_A23WJ53LT4_1_kallisto_mqc.tsv
  Sample: aih-tih-sc-33eb27-R1_A23WJ53LT4_1
  Mean Fragment Length: 120.1 bp
  Median Fragment Length: 112.0 bp
  pct_mito_est_counts: 0.009%
  pct_ribo_est_counts: 1.034%
  pct_hk_est_counts: 0.596%
  pct_male_est_counts: 0.0%
  pct_mito_tpm: 0.018%
  pct_ribo_tpm: 3.088%
  pct_hk_tpm: 0.869%
  pct_male_tpm: 0.0%
  score_log2tpm1_mean_chry_signature: 3.562%