AIH curated blacklist: matched 10 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 181
Pass (FILTER=PASS): 9 (5.0%)
Fail (FILTER=FAIL): 172 (95.0%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 10
All 10 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 32
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 21
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 20
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 15
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 14
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 12
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 11
confidence_below_min(low<high): 9
confidence_below_min(medium<high): 7
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 6
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 6
confidence_below_min(medium<high);aih_curated_blacklist: 4
confidence_below_min(low<high);aih_curated_blacklist: 3
confidence_below_min(low<high);total_reads_below_min(7.0<8.0): 2
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 2
Breakdown by confidence:
high: 9 pass, 5 fail (total: 14)
low: 0 pass, 107 fail (total: 107)
medium: 0 pass, 60 fail (total: 60)
Arriba filter: 181 rows -> 9 PASS; wrote aih-tih-sc-d64bdd-R1_A23WJ53LT4_1.arriba.fusions.filtered.tsv and aih-tih-sc-d64bdd-R1_A23WJ53LT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: aih-tih-sc-d64bdd-R1_A23WJ53LT4_1.arriba.fusions.filter_summary.txt