Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/71/7f0b12c243fdf8cbd636ce9eb410d9/aih-tih-sc-2482ef-R1_A23WJ53LT4_1.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5c/7aa34afe709a63526c2d156dafb7b6/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/99/5feb0b6c3dc1ded6008d6510004d31/aih-tih-sc-2482ef-R1_A23WJ53LT4_1.Aligned.sortedByCoord.out.bam.bai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5c/7aa34afe709a63526c2d156dafb7b6/.command.run
==> STAGING COMPLETE (4 inputs)

[W::hts_idx_load3] The index file is older than the data file: aih-tih-sc-2482ef-R1_A23WJ53LT4_1.Aligned.sortedByCoord.out.bam.bai
Load BAM file ...  Done
report duplicte rate based on sequence ...
report duplicte rate based on mapping  ...
generate R script ...
null device 
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