NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES (aih-tih-sc-4ca6a8-R1_A23WJ53LT4_1) - dev_rna_exp0019_2-73d51683 - Workflow Tracker

Runs
dev_rna_exp0.._2-73d51683
Tasks
GATK4_MARKDUPLICATES (aih-tih-sc-4ca6a8-R1_A23WJ53LT4_1)

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Task Info

Status: succeeded
Hash: 329618489a59
Process: NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES
Tag: aih-tih-sc-4ca6a8-R1_A23WJ53LT4_1
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: f8/bdc93c
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/mulled-v2-d9e7bad0f7fbc8f4458d5c3ab7ffaaf0235b59fb:f857e2d6cc88d35580d01cf39e0959a68b83c1d9-0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f8/bdc93c9b7e0808b850b65af66207e0
Native ID: nf-f8bdc93c9b7e0808b850b65af66207e0-44fb4

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.5 / 2
Memory (peak / alloc): 101.7 GB / 148.0 GB
Process I/O (rchar / wchar): 56.6 GB / 37.7 GB
Disk I/O (read / write): - / 37.7 GB
Host: i-04a5dd5d877e34869 ( on-demand)

Runtime

Submitted: Jun 08, 2026 2:42:29 AM
Completed: Jun 08, 2026 3:32:40 AM
Total Duration: 50m 10s

Phases

Queue: 2s
Execution: 47m 59s
Stage/Unstage: 2m 9s

Attempt 1

Execution

Status: failed
Hash: 2b/2a9470
Failure Reason: BackoffLimitExceeded ()
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/mulled-v2-d9e7bad0f7fbc8f4458d5c3ab7ffaaf0235b59fb:f857e2d6cc88d35580d01cf39e0959a68b83c1d9-0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2b/2a9470f7078c5ca32abcbcdaab7a62
Native ID: nf-2b2a9470f7078c5ca32abcbcdaab7a62-0c26b

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 74.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-0875962b6ecf5f267 ( spot)

Runtime

Submitted: Jun 08, 2026 1:57:27 AM
Completed: Jun 08, 2026 2:42:29 AM
Total Duration: 45m 1s

Phases

Queue: 45m 1s
Execution: -
Stage/Unstage: -