Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/69/aa70baf6aa1654d46c1e2a6eeba7ca/aih-tih-sc-693ffe-R1_A23WJ53LT4_1.star_alignment.Aligned.sortedByCoord.out.cram
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/cc/c71be09a99ff5360554884de046f0d/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/cc/c71be09a99ff5360554884de046f0d/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.bai: No such file or directory
ls: *.csi: No such file or directory