Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ea/830af06bf42f76f7980f94017ee89e/NTC_0001_0001_A23WJ53LT4_1.star_alignment.Aligned.sortedByCoord.out.cram
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/49/5e4c2e6a52271fd0fe2da82a35cbf4/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/49/5e4c2e6a52271fd0fe2da82a35cbf4/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.bai: No such file or directory
ls: *.csi: No such file or directory