[W::hts_idx_load3] The index file is older than the data file: aih-tih-sc-1ffee4-R1_A23WJ53LT4_1.Aligned.sortedByCoord.out.bam.bai
Reading reference bed file:  ref_annot.bed  ...  Done
Load BAM file ...  Done

===================================================================
Total splicing  Events:	351591823
Known Splicing Events:	348772705
Partial Novel Splicing Events:	1455278
Novel Splicing Events:	1261476
Filtered Splicing Events:	102364

Total splicing  Junctions:	569127
Known Splicing Junctions:	274595
Partial Novel Splicing Junctions:	155516
Novel Splicing Junctions:	139016

===================================================================
Create BED file ...
Create Interact file ...