Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a4/0352010e5727c976f7d16ce88a08da/ref_annot.bed
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/73/7f29d4ba8bfb05966a3dd6e5f9a998/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/73/7f29d4ba8bfb05966a3dd6e5f9a998/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/94/c82f3abe66dde4df84f5b367dc575a/aih-tih-sc-33eb27-R1_A23WJ53LT4_1.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/76/522af6db9d3e115c2da781af157cfd/aih-tih-sc-33eb27-R1_A23WJ53LT4_1.Aligned.sortedByCoord.out.bam.bai
==> STAGING COMPLETE (5 inputs)

null device 
          1 
null device 
          1 
total = 282047312
[W::hts_idx_load3] The index file is older than the data file: aih-tih-sc-33eb27-R1_A23WJ53LT4_1.Aligned.sortedByCoord.out.bam.bai
Reading reference bed file:  ref_annot.bed  ...  Done
Load BAM file ...  Done

===================================================================
Total splicing  Events:	282047312
Known Splicing Events:	279478160
Partial Novel Splicing Events:	1346804
Novel Splicing Events:	1106715
Filtered Splicing Events:	115633

Total splicing  Junctions:	448514
Known Splicing Junctions:	248222
Partial Novel Splicing Junctions:	107247
Novel Splicing Junctions:	93045

===================================================================
Create BED file ...
Create Interact file ...