Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a3/4c71e758f37520e8a411ba166bb563/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/21/ccfdff11662fa4bac6c518ba642857/aih-tih-sc-9fb608-R1_A23WJ53LT4_1.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a3/4c71e758f37520e8a411ba166bb563/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.csi: No such file or directory
ls: *.crai: No such file or directory