AIH curated blacklist: matched 6 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 148
Pass (FILTER=PASS): 24 (16.2%)
Fail (FILTER=FAIL): 124 (83.8%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 6
All 6 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 25
confidence_below_min(medium<high): 20
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 12
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 11
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 11
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 9
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 5
confidence_below_min(low<high): 5
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 4
confidence_below_min(medium<high);aih_curated_blacklist: 3
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 3
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 2
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 2
total_reads_below_min(6.0<8.0): 2
total_reads_below_min(3.0<8.0): 2
Breakdown by confidence:
high: 24 pass, 7 fail (total: 31)
low: 0 pass, 64 fail (total: 64)
medium: 0 pass, 53 fail (total: 53)
Arriba filter: 148 rows -> 24 PASS; wrote aih-tih-sc-408cca-R1_A23WJ53LT4_1.arriba.fusions.filtered.tsv and aih-tih-sc-408cca-R1_A23WJ53LT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: aih-tih-sc-408cca-R1_A23WJ53LT4_1.arriba.fusions.filter_summary.txt