Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/22/b8369089b7b5069512585332d80c9e/aih-tih-sc-4ca6a8-R1_A23WJ53LT4_1.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2e/97ddbe30d9a5b74f119d7c2aeb348e/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2e/97ddbe30d9a5b74f119d7c2aeb348e/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.csi: No such file or directory
ls: *.crai: No such file or directory