AIH curated blacklist: matched 16 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 219
Pass (FILTER=PASS): 13 (5.9%)
Fail (FILTER=FAIL): 206 (94.1%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 16
All 16 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 86
confidence_below_min(low<high): 13
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 13
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 13
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 13
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 12
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 11
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 8
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 5
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 4
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 4
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 3
confidence_below_min(medium<high);aih_curated_blacklist: 3
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 3
total_reads_below_min(7.0<8.0);aih_curated_blacklist: 2
Breakdown by confidence:
high: 13 pass, 6 fail (total: 19)
low: 0 pass, 74 fail (total: 74)
medium: 0 pass, 126 fail (total: 126)
Arriba filter: 219 rows -> 13 PASS; wrote aih-tih-sc-835699-R1_A23WJ53LT4_1.arriba.fusions.filtered.tsv and aih-tih-sc-835699-R1_A23WJ53LT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: aih-tih-sc-835699-R1_A23WJ53LT4_1.arriba.fusions.filter_summary.txt