[quant] fragment length distribution will be estimated from the data
[index] k-mer length: 31
[index] number of targets: 194,360
[index] number of k-mers: 112,035,259
[quant] running in paired-end mode
[quant] will process pair 1: aih-tih-sc-0419d4-R1_A23WJ53LT4_1_1.fastp.fastq.gz
aih-tih-sc-0419d4-R1_A23WJ53LT4_1_2.fastp.fastq.gz
[quant] finding pseudoalignments for the reads ...
[progress] 1M reads processed (98.1% mapped)
[progress] 2M reads processed (98.1% mapped)
[progress] 3M reads processed (98.1% mapped)
[progress] 4M reads processed (98.1% mapped)
[progress] 5M reads processed (98.1% mapped)
[progress] 6M reads processed (98.1% mapped)
[progress] 7M reads processed (98.1% mapped)
[progress] 8M reads processed (98.1% mapped)
[progress] 9M reads processed (98.1% mapped)
[progress] 10M reads processed (98.1% mapped)
[progress] 11M reads processed (98.1% mapped)
[progress] 12M reads processed (98.1% mapped)
[progress] 13M reads processed (98.1% mapped)
[progress] 14M reads processed (98.1% mapped)
[progress] 15M reads processed (98.1% mapped)
[progress] 16M reads processed (98.1% mapped)
[progress] 17M reads processed (98.1% mapped)
[progress] 18M reads processed (98.1% mapped)
[progress] 19M reads processed (98.1% mapped)
[progress] 20M reads processed (98.1% mapped)
[progress] 21M reads processed (98.1% mapped)
[progress] 22M reads processed (98.1% mapped)
[progress] 23M reads processed (98.1% mapped)
[progress] 24M reads processed (98.1% mapped)
[progress] 25M reads processed (98.1% mapped)
[progress] 26M reads processed (98.1% mapped)
[progress] 27M reads processed (98.1% mapped)
[progress] 28M reads processed (98.1% mapped)
[progress] 29M reads processed (98.1% mapped)
[progress] 30M reads processed (98.1% mapped)
[progress] 31M reads processed (98.1% mapped)
[progress] 32M reads processed (98.1% mapped)
[progress] 33M reads processed (98.1% mapped)
[progress] 34M reads processed (98.1% mapped)
[progress] 35M reads processed (98.1% mapped)
[progress] 36M reads processed (98.1% mapped)
[progress] 37M reads processed (98.1% mapped)
[progress] 38M reads processed (98.1% mapped)
[progress] 39M reads processed (98.1% mapped)
[progress] 40M reads processed (98.1% mapped)
[progress] 41M reads processed (98.1% mapped)
[progress] 42M reads processed (98.1% mapped)
[progress] 43M reads processed (98.1% mapped)
[progress] 44M reads processed (98.1% mapped)
[progress] 46M reads processed (98.1% mapped)
[progress] 47M reads processed (98.1% mapped)
[progress] 48M reads processed (98.1% mapped)
[progress] 49M reads processed (98.1% mapped)
[progress] 50M reads processed (98.1% mapped)
[progress] 51M reads processed (98.1% mapped)
[progress] 52M reads processed (98.1% mapped)
[progress] 53M reads processed (98.1% mapped)
[progress] 54M reads processed (98.1% mapped)
[progress] 55M reads processed (98.1% mapped)
[progress] 56M reads processed (98.1% mapped)
[progress] 57M reads processed (98.1% mapped)
[progress] 58M reads processed (98.1% mapped)
[progress] 59M reads processed (98.1% mapped)
[progress] 60M reads processed (98.1% mapped)
[progress] 61M reads processed (98.1% mapped)
[progress] 62M reads processed (98.1% mapped)
[progress] 63M reads processed (98.1% mapped)
[progress] 64M reads processed (98.1% mapped)
[progress] 65M reads processed (98.1% mapped)
[progress] 66M reads processed (98.1% mapped)
[progress] 67M reads processed (98.1% mapped)
[progress] 68M reads processed (98.1% mapped)
[progress] 69M reads processed (98.1% mapped)
[progress] 70M reads processed (98.1% mapped)
[progress] 71M reads processed (98.1% mapped)
[progress] 72M reads processed (98.1% mapped)
[progress] 73M reads processed (98.1% mapped)
[progress] 74M reads processed (98.1% mapped)
[progress] 75M reads processed (98.1% mapped)
[progress] 76M reads processed (98.1% mapped)
[progress] 77M reads processed (98.1% mapped)
[progress] 78M reads processed (98.1% mapped)
[progress] 79M reads processed (98.1% mapped)
[progress] 80M reads processed (98.1% mapped)
[progress] 81M reads processed (98.1% mapped)
[progress] 82M reads processed (98.1% mapped)
[progress] 83M reads processed (98.1% mapped)
[progress] 84M reads processed (98.1% mapped)
[progress] 85M reads processed (98.1% mapped)
[progress] 86M reads processed (98.1% mapped)
[progress] 87M reads processed (98.1% mapped)
[progress] 88M reads processed (98.1% mapped)
[progress] 89M reads processed (98.1% mapped)
[progress] 90M reads processed (98.1% mapped)
[progress] 92M reads processed (98.1% mapped)
[progress] 93M reads processed (98.1% mapped)
[progress] 94M reads processed (98.1% mapped)
[progress] 95M reads processed (98.1% mapped)
[progress] 96M reads processed (98.1% mapped)
[progress] 97M reads processed (98.1% mapped)
[progress] 98M reads processed (98.1% mapped)
[progress] 99M reads processed (98.1% mapped)
[progress] 100M reads processed (98.1% mapped)
[progress] 101M reads processed (98.1% mapped)
[progress] 102M reads processed (98.1% mapped)
[progress] 103M reads processed (98.1% mapped)
[progress] 104M reads processed (98.1% mapped)
[progress] 105M reads processed (98.1% mapped)
[progress] 106M reads processed (98.1% mapped)
[progress] 107M reads processed (98.1% mapped)
[progress] 108M reads processed (98.1% mapped)
[progress] 109M reads processed (98.1% mapped)
[progress] 110M reads processed (98.1% mapped)
[progress] 111M reads processed (98.1% mapped)
[progress] 112M reads processed (98.1% mapped)
[progress] 113M reads processed (98.1% mapped)
[progress] 114M reads processed (98.1% mapped)
[progress] 115M reads processed (98.1% mapped)
[progress] 116M reads processed (98.1% mapped)
[progress] 117M reads processed (98.1% mapped)
[progress] 118M reads processed (98.1% mapped)
[progress] 119M reads processed (98.1% mapped)
[progress] 120M reads processed (98.1% mapped)
[progress] 121M reads processed (98.1% mapped)
[progress] 122M reads processed (98.1% mapped)
[progress] 123M reads processed (98.1% mapped)
[progress] 124M reads processed (98.1% mapped)
[progress] 125M reads processed (98.1% mapped)
[progress] 126M reads processed (98.1% mapped)
[progress] 127M reads processed (98.1% mapped)
[progress] 128M reads processed (98.1% mapped)
[progress] 129M reads processed (98.1% mapped)
[progress] 130M reads processed (98.1% mapped)
[progress] 131M reads processed (98.1% mapped)
[progress] 132M reads processed (98.1% mapped)
[progress] 133M reads processed (98.1% mapped)
[progress] 135M reads processed (98.1% mapped)
[progress] 136M reads processed (98.1% mapped)
[progress] 137M reads processed (98.1% mapped)
[progress] 138M reads processed (98.1% mapped)
[progress] 139M reads processed (98.1% mapped)
[progress] 140M reads processed (98.1% mapped)
[progress] 141M reads processed (98.1% mapped)
[progress] 142M reads processed (98.1% mapped)
[progress] 143M reads processed (98.1% mapped)
[progress] 144M reads processed (98.1% mapped)
[progress] 145M reads processed (98.1% mapped)
[progress] 146M reads processed (98.1% mapped)
[progress] 147M reads processed (98.1% mapped)
[progress] 148M reads processed (98.1% mapped)
[progress] 149M reads processed (98.1% mapped)
[progress] 150M reads processed (98.1% mapped)
[progress] 151M reads processed (98.1% mapped)
[progress] 152M reads processed (98.1% mapped)
[progress] 153M reads processed (98.1% mapped)
[progress] 154M reads processed (98.1% mapped)
[progress] 155M reads processed (98.1% mapped)
[progress] 156M reads processed (98.1% mapped)
[progress] 157M reads processed (98.1% mapped)
[progress] 158M reads processed (98.1% mapped)
[progress] 159M reads processed (98.1% mapped)
[progress] 160M reads processed (98.1% mapped)
[progress] 161M reads processed (98.1% mapped)
[progress] 162M reads processed (98.1% mapped)
[progress] 163M reads processed (98.1% mapped)
[progress] 164M reads processed (98.1% mapped)
[progress] 165M reads processed (98.1% mapped)
[progress] 166M reads processed (98.1% mapped)
[progress] 167M reads processed (98.1% mapped)
[progress] 168M reads processed (98.1% mapped)
[progress] 169M reads processed (98.1% mapped)
[progress] 170M reads processed (98.1% mapped)
[progress] 171M reads processed (98.1% mapped)
[progress] 172M reads processed (98.1% mapped)
[progress] 173M reads processed (98.1% mapped)
[progress] 174M reads processed (98.1% mapped)
[progress] 175M reads processed (98.1% mapped)
[progress] 176M reads processed (98.1% mapped)
[progress] 177M reads processed (98.1% mapped)
[progress] 178M reads processed (98.1% mapped)
[progress] 179M reads processed (98.1% mapped)
[progress] 180M reads processed (98.1% mapped)
[progress] 182M reads processed (98.1% mapped)
[progress] 183M reads processed (98.1% mapped)
[progress] 184M reads processed (98.1% mapped)
[progress] 185M reads processed (98.1% mapped)
[progress] 186M reads processed (98.1% mapped)
[progress] 187M reads processed (98.1% mapped)
[progress] 188M reads processed (98.1% mapped)
[progress] 189M reads processed (98.1% mapped) done
[quant] processed 189,923,055 reads, 186,279,229 reads pseudoaligned
[quant] estimated average fragment length: 124.9
[ em] quantifying the abundances ... done
[ em] the Expectation-Maximization algorithm ran for 1,574 rounds