Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ab/d779ab3a9c68052df9eff0fe7e7c59/aih-tih-sc-5e5452-R1_A23WJ53LT4_1_1.fastp.fastq.gz
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a9/98dd71007d4f9646720112c5360db7/.command.sh
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ab/d779ab3a9c68052df9eff0fe7e7c59/aih-tih-sc-5e5452-R1_A23WJ53LT4_1_2.fastp.fastq.gz
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a9/98dd71007d4f9646720112c5360db7/.command.run
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0a/32565e1355a6010a747c7c410a9a10/aih-tih-sc-5e5452-R1_A23WJ53LT4_1.Chimeric.out.junction
==> STAGING COMPLETE (6 inputs)
-ctat genome lib [/tmp/nxf.pCR6BSb5Pd/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.pCR6BSb5Pd/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.pCR6BSb5Pd/./star-fusion.preliminary
-sample contains 134553217 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes --genome_lib_dir /tmp/nxf.pCR6BSb5Pd/ctat_genome_lib_build_dir -J /tmp/nxf.pCR6BSb5Pd/aih-tih-sc-5e5452-R1_A23WJ53LT4_1.Chimeric.out.junction -O /tmp/nxf.pCR6BSb5Pd/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4
-parsing fusion evidence: /tmp/nxf.pCR6BSb5Pd/aih-tih-sc-5e5452-R1_A23WJ53LT4_1.Chimeric.out.junction
-building interval tree based on /tmp/nxf.pCR6BSb5Pd/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes
[10000], rate=75000.00/min
[20000], rate=75000.00/min
[30000], rate=78260.87/min
[40000], rate=80000.00/min
[50000], rate=85714.29/min
[60000], rate=87804.88/min
[70000], rate=89361.70/min
[80000], rate=92307.69/min
[90000], rate=87096.77/min
[100000], rate=80000.00/min
[110000], rate=76744.19/min
[120000], rate=73469.39/min
[130000], rate=70909.09/min
[140000], rate=69421.49/min
[150000], rate=67669.17/min
[160000], rate=66666.67/min
[170000], rate=66233.77/min
[180000], rate=65853.66/min
[190000], rate=65517.24/min
[200000], rate=65573.77/min
[210000], rate=65968.59/min
[220000], rate=66331.66/min
[230000], rate=67317.07/min
[240000], rate=67605.63/min
[250000], rate=68181.82/min
[260000], rate=68722.47/min
[270000], rate=69230.77/min
[280000], rate=70000.00/min
[290000], rate=70731.71/min
[300000], rate=71713.15/min
[310000], rate=69662.92/min
[320000], rate=68327.40/min
[330000], rate=67346.94/min
[340000], rate=66449.51/min
[350000], rate=65625.00/min
[360000], rate=64670.66/min
[370000], rate=63793.10/min
[380000], rate=63333.33/min
[390000], rate=62566.84/min
[400000], rate=62015.50/min
[410000], rate=61654.14/min
[420000], rate=61313.87/min
[430000], rate=61282.66/min
[440000], rate=61252.90/min
[450000], rate=61363.64/min
[460000], rate=61607.14/min
[470000], rate=62251.66/min
[480000], rate=62608.70/min
[490000], rate=62955.03/min
[500000], rate=63424.95/min
[510000], rate=63883.09/min
[520000], rate=64462.81/min
[530000], rate=64897.96/min
[540000], rate=64541.83/min
[550000], rate=63829.79/min
[560000], rate=63157.89/min
[570000], rate=62752.29/min
[580000], rate=62254.03/min
[590000], rate=62105.26/min
[600000], rate=61962.13/min
[610000], rate=61928.93/min
[620000], rate=61794.02/min
[630000], rate=61865.79/min
[640000], rate=61835.75/min
[650000], rate=61904.76/min
[660000], rate=61971.83/min
[670000], rate=62037.04/min
[680000], rate=62006.08/min
[690000], rate=61883.41/min
[700000], rate=61946.90/min
[710000], rate=62008.73/min
[720000], rate=62247.84/min
[730000], rate=62482.17/min
[740000], rate=62800.57/min
[750000], rate=63025.21/min
[760000], rate=63245.49/min
[770000], rate=63636.36/min
[780000], rate=64021.89/min
[790000], rate=64402.17/min
[800000], rate=64777.33/min
[810000], rate=65147.45/min
[820000], rate=64907.65/min
[830000], rate=64759.43/min
[840000], rate=64698.33/min
[850000], rate=64556.96/min
[860000], rate=64500.00/min
[870000], rate=64524.10/min
[880000], rate=64468.86/min
[890000], rate=64570.74/min
[900000], rate=64670.66/min
[910000], rate=64845.61/min
[920000], rate=65017.67/min
[930000], rate=65263.16/min
[940000], rate=65505.23/min
[950000], rate=65743.94/min
[960000], rate=66130.88/min
[970000], rate=66666.67/min
[980000], rate=67123.29/min
[990000], rate=67576.79/min
[1000000], rate=68027.21/min
[1010000], rate=68320.18/min
[1020000], rate=68303.57/min
[1030000], rate=68136.71/min
[1040000], rate=67973.86/min
[1050000], rate=67887.93/min
[1060000], rate=67876.20/min
[1070000], rate=67793.03/min
[1080000], rate=67853.40/min
[1090000], rate=67912.77/min
[1100000], rate=67971.16/min
[1110000], rate=68028.60/min
[1120000], rate=68154.16/min
[1130000], rate=68277.95/min
[1140000], rate=68605.82/min
[1150000], rate=68931.07/min
[1160000], rate=69184.89/min
[1170000], rate=69367.59/min
[1180000], rate=69616.52/min
[1190000], rate=69658.54/min
[1200000], rate=69565.22/min
[1210000], rate=69473.68/min
[1220000], rate=69383.89/min
[1230000], rate=69360.90/min
[1240000], rate=69402.99/min
[1250000], rate=69508.80/min
[1260000], rate=69549.22/min
[1270000], rate=69652.65/min
[1280000], rate=69818.18/min
[1290000], rate=69918.70/min
[1300000], rate=70080.86/min
[1310000], rate=70367.05/min
[1320000], rate=70525.38/min
[1330000], rate=70744.68/min -building interval tree based on /tmp/nxf.pCR6BSb5Pd/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes
[10000], rate=37500.00/min
[20000], rate=41379.31/min
[30000], rate=43902.44/min
[40000], rate=46153.85/min
[50000], rate=46153.85/min
[60000], rate=46753.25/min
[70000], rate=47727.27/min
[80000], rate=48979.59/min
[90000], rate=50000.00/min
[100000], rate=51282.05/min
[110000], rate=52380.95/min
[120000], rate=53731.34/min
[130000], rate=54929.58/min
[140000], rate=56000.00/min
[150000], rate=57324.84/min
[160000], rate=58536.59/min
[170000], rate=60000.00/min
[180000], rate=61714.29/min
[190000], rate=63333.33/min
[200000], rate=65217.39/min
[210000], rate=63000.00/min
[220000], rate=60550.46/min
[230000], rate=58474.58/min
[240000], rate=56917.00/min
[250000], rate=55762.08/min
[260000], rate=54736.84/min
[270000], rate=53820.60/min
[280000], rate=53164.56/min
[290000], rate=52409.64/min
[300000], rate=52023.12/min
[310000], rate=51810.58/min
[320000], rate=51336.90/min
[330000], rate=51295.34/min
[340000], rate=51385.39/min
[350000], rate=51344.74/min
[360000], rate=51306.41/min
[370000], rate=51388.89/min
[380000], rate=51351.35/min
[390000], rate=51541.85/min
[400000], rate=51612.90/min
[410000], rate=51898.73/min
[420000], rate=52173.91/min
[430000], rate=52439.02/min
[440000], rate=52694.61/min
[450000], rate=53045.19/min
[460000], rate=53801.17/min
[470000], rate=54335.26/min
[480000], rate=54857.14/min
[490000], rate=55367.23/min
[500000], rate=55762.08/min
[510000], rate=56250.00/min
[520000], rate=56624.32/min
[530000], rate=57091.56/min
[540000], rate=57548.85/min
[550000], rate=58098.59/min
[560000], rate=58638.74/min
[570000], rate=58864.03/min
[580000], rate=58983.05/min
[590000], rate=59197.32/min
[600000], rate=59504.13/min
[610000], rate=59901.80/min
[620000], rate=60194.17/min
[630000], rate=60576.92/min
[640000], rate=60952.38/min
[650000], rate=61320.75/min
[660000], rate=61875.00/min
[670000], rate=62229.10/min
[680000], rate=62865.95/min
[690000], rate=63692.31/min
[700000], rate=64516.13/min
[710000], rate=65038.17/min
[720000], rate=65454.55/min
[730000], rate=66163.14/min
[740000], rate=66968.33/min
[750000], rate=67164.18/min
[760000], rate=67555.56/min
[770000], rate=67841.41/min
[780000], rate=68621.70/min
[790000], rate=69501.47/min
[800000], rate=70072.99/min
[810000], rate=70434.78/min
[820000], rate=70893.37/min
[830000], rate=71654.68/min
[840000], rate=72103.00/min
[850000], rate=72443.18/min
[860000], rate=72573.84/min
[870000], rate=73006.99/min
[880000], rate=73435.33/min
[890000], rate=74166.67/min
[900000], rate=74585.64/min
[910000], rate=74794.52/min
[920000], rate=75000.00/min
[930000], rate=75202.16/min
[940000], rate=75603.22/min
[950000], rate=75898.80/min
[960000], rate=76089.83/min
[970000], rate=76078.43/min
[980000], rate=76067.27/min
[990000], rate=76153.85/min
[1000000], rate=76433.12/min
[1010000], rate=76515.15/min
[1020000], rate=76691.73/min
[1030000], rate=76865.67/min
[1040000], rate=77037.04/min
[1050000], rate=77205.88/min
[1060000], rate=77372.26/min
[1070000], rate=77163.46/min
[1080000], rate=76325.09/min
[1090000], rate=75694.44/min
[1100000], rate=75085.32/min
[1110000], rate=74580.07/min
[1120000], rate=74008.81/min
[1130000], rate=73615.64/min
[1140000], rate=73076.92/min
[1150000], rate=72478.99/min
[1160000], rate=72049.69/min
[1170000], rate=71705.82/min
[1180000], rate=71442.99/min
[1190000], rate=71328.67/min
[1200000], rate=71146.25/min
[1210000], rate=71037.18/min
[1220000], rate=70999.03/min
[1230000], rate=70893.37/min
[1240000], rate=70924.69/min
[1250000], rate=70955.53/min
[1260000], rate=71119.47/min
[1270000], rate=71281.57/min
[1280000], rate=71441.86/min
[1290000], rate=70944.09/min
[1300000], rate=70460.70/min
[1310000], rate=70053.48/min
[1320000], rate=69779.74/min
[1330000], rate=69512.20/min -building interval tree based on /tmp/nxf.pCR6BSb5Pd/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes
[10000], rate=150000.00/min
[20000], rate=150000.00/min
[30000], rate=120000.00/min
[40000], rate=109090.91/min
[50000], rate=107142.86/min
[60000], rate=102857.14/min
[70000], rate=102439.02/min
[80000], rate=104347.83/min
[90000], rate=105882.35/min
[100000], rate=103448.28/min
[110000], rate=97058.82/min
[120000], rate=91139.24/min
[130000], rate=88636.36/min
[140000], rate=86597.94/min
[150000], rate=85714.29/min
[160000], rate=84955.75/min
[170000], rate=85000.00/min
[180000], rate=85039.37/min
[190000], rate=85714.29/min
[200000], rate=86330.94/min
[210000], rate=87500.00/min
[220000], rate=88590.60/min
[230000], rate=85185.19/min
[240000], rate=82758.62/min
[250000], rate=81081.08/min
[260000], rate=79187.82/min
[270000], rate=77884.62/min
[280000], rate=77064.22/min
[290000], rate=76651.98/min
[300000], rate=76271.19/min
[310000], rate=76543.21/min
[320000], rate=76800.00/min
[330000], rate=77343.75/min
[340000], rate=77566.54/min
[350000], rate=73943.66/min
[360000], rate=71052.63/min
[370000], rate=69375.00/min
[380000], rate=68674.70/min
[390000], rate=66857.14/min
[400000], rate=65395.10/min
[410000], rate=64397.91/min
[420000], rate=63797.47/min
[430000], rate=63390.66/min
[440000], rate=63007.16/min
[450000], rate=62790.70/min
[460000], rate=62585.03/min
[470000], rate=62527.72/min
[480000], rate=62337.66/min
[490000], rate=62156.45/min
[500000], rate=62111.80/min
[510000], rate=62068.97/min
[520000], rate=61904.76/min
[530000], rate=61747.57/min
[540000], rate=61832.06/min
[550000], rate=61567.16/min
[560000], rate=61651.38/min
[570000], rate=61621.62/min
[580000], rate=61592.92/min
[590000], rate=61780.10/min
[600000], rate=61962.13/min
[610000], rate=62139.22/min
[620000], rate=62521.01/min
[630000], rate=62895.17/min
[640000], rate=63366.34/min
[650000], rate=63725.49/min
[660000], rate=62658.23/min
[670000], rate=61846.15/min
[680000], rate=61261.26/min
[690000], rate=60972.02/min
[700000], rate=60606.06/min
[710000], rate=60425.53/min
[720000], rate=60251.05/min
[730000], rate=60082.30/min
[740000], rate=60000.00/min
[750000], rate=59920.11/min
[760000], rate=59764.09/min
[770000], rate=59767.14/min
[780000], rate=59770.11/min
[790000], rate=59848.48/min
[800000], rate=60000.00/min
[810000], rate=60148.51/min
[820000], rate=60294.12/min
[830000], rate=60510.33/min
[840000], rate=60649.82/min
[850000], rate=60714.29/min
[860000], rate=61065.09/min
[870000], rate=61195.78/min
[880000], rate=61395.35/min
[890000], rate=61734.10/min
[900000], rate=61926.61/min
[910000], rate=61975.03/min
[920000], rate=62232.24/min
[930000], rate=62276.79/min
[940000], rate=62389.38/min
[950000], rate=62568.61/min
[960000], rate=62608.70/min
[970000], rate=62715.52/min
[980000], rate=62820.51/min
[990000], rate=62923.73/min
[1000000], rate=63025.21/min
[1010000], rate=63125.00/min
[1020000], rate=63288.52/min
[1030000], rate=63384.62/min
[1040000], rate=63286.00/min
[1050000], rate=63316.58/min
[1060000], rate=63283.58/min
[1070000], rate=63251.23/min
[1080000], rate=63157.89/min
[1090000], rate=63127.41/min
[1100000], rate=63157.89/min
[1110000], rate=63187.86/min
[1120000], rate=63157.89/min
[1130000], rate=63246.27/min
[1140000], rate=63333.33/min
[1150000], rate=63477.46/min
[1160000], rate=63619.74/min
[1170000], rate=63818.18/min
[1180000], rate=64014.47/min
[1190000], rate=64150.94/min
[1200000], rate=64343.16/min
[1210000], rate=64418.81/min
[1220000], rate=64664.31/min
[1230000], rate=64850.62/min
[1240000], rate=64978.17/min
[1250000], rate=65104.17/min
[1260000], rate=65284.97/min
[1270000], rate=64851.06/min
[1280000], rate=64106.84/min
[1290000], rate=63390.66/min
[1300000], rate=62751.41/min
[1310000], rate=62183.54/min
[1320000], rate=61682.24/min -building interval tree based on /tmp/nxf.pCR6BSb5Pd/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes
[10000], rate=120000.00/min
[20000], rate=133333.33/min
[30000], rate=138461.54/min
[40000], rate=150000.00/min
[50000], rate=176470.59/min
[60000], rate=180000.00/min
[70000], rate=175000.00/min
[80000], rate=165517.24/min
[90000], rate=168750.00/min
[100000], rate=176470.59/min
[110000], rate=194117.65/min
[120000], rate=184615.38/min
[130000], rate=181395.35/min
[140000], rate=178723.40/min
[150000], rate=180000.00/min
[160000], rate=184615.38/min
[170000], rate=182142.86/min
[180000], rate=180000.00/min
[190000], rate=178125.00/min
[200000], rate=179104.48/min
[210000], rate=182608.70/min
[220000], rate=159036.14/min
[230000], rate=125454.55/min
[240000], rate=102127.66/min
[250000], rate=87719.30/min
[260000], rate=76470.59/min
[270000], rate=68936.17/min
[280000], rate=62222.22/min
[290000], rate=57049.18/min
[300000], rate=53571.43/min
[310000], rate=50819.67/min
[320000], rate=48241.21/min
[330000], rate=46698.11/min
[340000], rate=45535.71/min
[350000], rate=44491.53/min
[360000], rate=43724.70/min
[370000], rate=43106.80/min
[380000], rate=42776.74/min
[390000], rate=42468.24/min
[400000], rate=42253.52/min
[410000], rate=42195.54/min
[420000], rate=42281.88/min
[430000], rate=42434.21/min
[440000], rate=42649.43/min
[450000], rate=42721.52/min
[460000], rate=42923.79/min
[470000], rate=43119.27/min
[480000], rate=43308.27/min
[490000], rate=43362.83/min
[500000], rate=43478.26/min
[510000], rate=43589.74/min
[520000], rate=43697.48/min
[530000], rate=43801.65/min
[540000], rate=43962.01/min
[550000], rate=44058.74/min
[560000], rate=44210.53/min
[570000], rate=44357.98/min
[580000], rate=44501.28/min
[590000], rate=44696.97/min
[600000], rate=44943.82/min
[610000], rate=45185.19/min
[620000], rate=45476.77/min
[630000], rate=45818.18/min
[640000], rate=46153.85/min
[650000], rate=46483.91/min
[660000], rate=46919.43/min
[670000], rate=47294.12/min
[680000], rate=47719.30/min
[690000], rate=48139.53/min
[700000], rate=48275.86/min
[710000], rate=48354.14/min
[720000], rate=48484.85/min
[730000], rate=48612.65/min
[740000], rate=48630.89/min
[750000], rate=48754.06/min
[760000], rate=48979.59/min
[770000], rate=49253.73/min
[780000], rate=49471.46/min
[790000], rate=49685.53/min
[800000], rate=49947.97/min
[810000], rate=50206.61/min
[820000], rate=50461.54/min
[830000], rate=50712.83/min
[840000], rate=51012.15/min
[850000], rate=51359.52/min
[860000], rate=51651.65/min
[870000], rate=51992.03/min
[880000], rate=51764.71/min
[890000], rate=51395.57/min
[900000], rate=51136.36/min
[910000], rate=50790.70/min
[920000], rate=50549.45/min
[930000], rate=50270.27/min
[940000], rate=50088.81/min
[950000], rate=49868.77/min
[960000], rate=49740.93/min
[970000], rate=49658.70/min
[980000], rate=49662.16/min
[990000], rate=49707.11/min
[1000000], rate=49627.79/min
[1010000], rate=49590.83/min
[1020000], rate=49594.81/min
[1030000], rate=49598.72/min
[1040000], rate=49602.54/min
[1050000], rate=49684.54/min
[1060000], rate=49804.23/min
[1070000], rate=49922.24/min
[1080000], rate=50077.28/min
[1090000], rate=50269.02/min
[1100000], rate=50458.72/min
[1110000], rate=50646.39/min
[1120000], rate=50793.65/min
[1130000], rate=50634.80/min
[1140000], rate=50257.16/min
[1150000], rate=49927.64/min
[1160000], rate=49714.29/min
[1170000], rate=49506.35/min
[1180000], rate=49303.62/min
[1190000], rate=49173.55/min
[1200000], rate=48979.59/min
[1210000], rate=48823.13/min
[1220000], rate=48702.59/min
[1230000], rate=48616.60/min
[1240000], rate=48532.29/min
[1250000], rate=48418.33/min
[1260000], rate=48430.49/min
[1270000], rate=48411.69/min
[1280000], rate=48454.26/min
[1290000], rate=48526.65/min
[1300000], rate=48628.43/min
[1310000], rate=48729.08/min
[1320000], rate=48858.73/min
[1330000], rate=49017.20/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads -J /tmp/nxf.pCR6BSb5Pd/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --genome_lib_dir /tmp/nxf.pCR6BSb5Pd/ctat_genome_lib_build_dir --filt_file /tmp/nxf.pCR6BSb5Pd/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail -M 50 > /tmp/nxf.pCR6BSb5Pd/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-parsing /tmp/nxf.pCR6BSb5Pd/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.
6000000.00 reads per min processed...
12000000.00 reads per min processed...
6000000.00 reads per min processed...
4800000.00 reads per min processed...
4285714.29 reads per min processed...
4000000.00 reads per min processed...
4200000.00 reads per min processed...
4363636.36 reads per min processed...
4153846.15 reads per min processed...
4285714.29 reads per min processed...
4125000.00 reads per min processed...
4000000.00 reads per min processed...
3900000.00 reads per min processed...
4000000.00 reads per min processed...
3913043.48 reads per min processed...
3840000.00 reads per min processed...
3777777.78 reads per min processed...
3724137.93 reads per min processed...
3800000.00 reads per min processed...
3750000.00 reads per min processed...
3818181.82 reads per min processed...
3771428.57 reads per min processed...
3729729.73 reads per min processed...
3692307.69 reads per min processed...
3750000.00 reads per min processed...
3714285.71 reads per min processed...
3681818.18 reads per min processed...
3733333.33 reads per min processed...
3782608.70 reads per min processed...
3913043.48 reads per min processed...
3875000.00 reads per min processed...
3918367.35 reads per min processed...
3960000.00 reads per min processed...
3923076.92 reads per min processed...
3962264.15 reads per min processed...
3927272.73 reads per min processed...
3894736.84 reads per min processed...
3931034.48 reads per min processed...
3900000.00 reads per min processed...
3934426.23 reads per min processed...
3904761.90 reads per min processed...
3937500.00 reads per min processed...
3909090.91 reads per min processed...
3940298.51 reads per min processed...
done.
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict -J /tmp/nxf.pCR6BSb5Pd/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -O /tmp/nxf.pCR6BSb5Pd/./star-fusion.preliminary/star-fusion
-parsing fusion evidence: /tmp/nxf.pCR6BSb5Pd/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.pCR6BSb5Pd/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter --fusion_preds /tmp/nxf.pCR6BSb5Pd/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary -J /tmp/nxf.pCR6BSb5Pd/aih-tih-sc-5e5452-R1_A23WJ53LT4_1.Chimeric.out.junction --tmpdir /tmp --min_junction_reads 0 --min_sum_frags 1 --require_LDAS 0 --max_promiscuity 10 --min_pct_dom_promiscuity 20 --min_novel_junction_support 1 --min_alt_pct_junction 10 --aggregate_novel_junction_dist 5 --min_spanning_frags_only 1 --genome_lib_dir /tmp/nxf.pCR6BSb5Pd/ctat_genome_lib_build_dir --out_prefix /tmp/nxf.pCR6BSb5Pd/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.pCR6BSb5Pd/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -214266.678223
EM: Round [1] log likelihood: -214168.363148
EM: Round [2] log likelihood: -214128.639444
EM: Round [3] log likelihood: -214108.627997
EM: Round [4] log likelihood: -214097.606207
EM: Round [5] log likelihood: -214091.254101
EM: Round [6] log likelihood: -214087.463376
EM: Round [7] log likelihood: -214085.117533
EM: Round [8] log likelihood: -214083.607888
EM: Round [9] log likelihood: -214082.597092
EM: Round [10] log likelihood: -214081.894326
EM: Round [11] log likelihood: -214081.388751
EM: Round [12] log likelihood: -214081.013979
EM: Round [13] log likelihood: -214080.728941
EM: Round [14] log likelihood: -214080.507387
EM: Round [15] log likelihood: -214080.332004
EM: Round [16] log likelihood: -214080.191024
EM: Round [17] log likelihood: -214080.076227
EM: Round [18] log likelihood: -214079.981723
EM: Round [19] log likelihood: -214079.903198
EM: Round [20] log likelihood: -214079.837425
EM: Round [21] log likelihood: -214079.781950
EM: Round [22] log likelihood: -214079.734875
EM: Round [23] log likelihood: -214079.694713
EM: Round [24] log likelihood: -214079.660285
EM: Round [25] log likelihood: -214079.630645
EM: Round [26] log likelihood: -214079.605027
EM: Round [27] log likelihood: -214079.582808
EM: Round [28] log likelihood: -214079.563473
EM: Round [29] log likelihood: -214079.546598
EM: Round [30] log likelihood: -214079.531827
EM: Round [31] log likelihood: -214079.518865
EM: Round [32] log likelihood: -214079.507462
EM: Round [33] log likelihood: -214079.497408
EM: Round [34] log likelihood: -214079.488523
EM: Round [35] log likelihood: -214079.480656
EM: Round [36] log likelihood: -214079.473677
EM: Round [37] log likelihood: -214079.467473
EM: Round [38] log likelihood: -214079.461950
EM: Round [39] log likelihood: -214079.457024
EM: Round [40] log likelihood: -214079.452623
EM: Round [41] log likelihood: -214079.448686
EM: Round [42] log likelihood: -214079.445159
EM: Round [43] log likelihood: -214079.441995
EM: Round [44] log likelihood: -214079.439153
EM: Round [45] log likelihood: -214079.436597
EM: Round [46] log likelihood: -214079.434295
EM: Round [47] log likelihood: -214079.432220
EM: Round [48] log likelihood: -214079.430347
EM: Round [49] log likelihood: -214079.428656
EM: Round [50] log likelihood: -214079.427126
EM: Round [51] log likelihood: -214079.425742
EM: Round [52] log likelihood: -214079.424488
EM: Round [53] log likelihood: -214079.423351
EM: Round [54] log likelihood: -214079.422319
EM: Round [55] log likelihood: -214079.421382
EM: Round [56] log likelihood: -214079.420531
EM: Round [57] log likelihood: -214079.419757
EM: Round [58] log likelihood: -214079.419053
EM: Round [59] log likelihood: -214079.418411
EM: Round [60] log likelihood: -214079.417827
EM: Round [61] log likelihood: -214079.417294
EM: Round [62] log likelihood: -214079.416808
EM: Round [63] log likelihood: -214079.416364
EM: Round [64] log likelihood: -214079.415960
EM: Round [65] log likelihood: -214079.415590
EM: Round [66] log likelihood: -214079.415251
EM: Round [67] log likelihood: -214079.414942
EM: Round [68] log likelihood: -214079.414659
EM: Round [69] log likelihood: -214079.414401
EM: Round [70] log likelihood: -214079.414164
EM: Round [71] log likelihood: -214079.413947
EM: Round [72] log likelihood: -214079.413748
EM: Round [73] log likelihood: -214079.413565
EM: Round [74] log likelihood: -214079.413398
EM: Round [75] log likelihood: -214079.413245
EM: Round [76] log likelihood: -214079.413105
EM: Round [77] log likelihood: -214079.412975
EM: Round [78] log likelihood: -214079.412857
EM: Round [79] log likelihood: -214079.412748
EM: Round [80] log likelihood: -214079.412648
EM: Stopping iterations at round 80 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -213513.966501
EM: Round [1] log likelihood: -213429.814900
EM: Round [2] log likelihood: -213397.073794
EM: Round [3] log likelihood: -213381.111420
EM: Round [4] log likelihood: -213372.520513
EM: Round [5] log likelihood: -213367.631570
EM: Round [6] log likelihood: -213364.727477
EM: Round [7] log likelihood: -213362.928882
EM: Round [8] log likelihood: -213361.766568
EM: Round [9] log likelihood: -213360.983646
EM: Round [10] log likelihood: -213360.435647
EM: Round [11] log likelihood: -213360.038753
EM: Round [12] log likelihood: -213359.742668
EM: Round [13] log likelihood: -213359.516163
EM: Round [14] log likelihood: -213359.339183
EM: Round [15] log likelihood: -213359.198433
EM: Round [16] log likelihood: -213359.084831
EM: Round [17] log likelihood: -213358.991999
EM: Round [18] log likelihood: -213358.915345
EM: Round [19] log likelihood: -213358.851486
EM: Round [20] log likelihood: -213358.797881
EM: Round [21] log likelihood: -213358.752586
EM: Round [22] log likelihood: -213358.714092
EM: Round [23] log likelihood: -213358.681210
EM: Round [24] log likelihood: -213358.652993
EM: Round [25] log likelihood: -213358.628680
EM: Round [26] log likelihood: -213358.607650
EM: Round [27] log likelihood: -213358.589398
EM: Round [28] log likelihood: -213358.573505
EM: Round [29] log likelihood: -213358.559624
EM: Round [30] log likelihood: -213358.547467
EM: Round [31] log likelihood: -213358.536791
EM: Round [32] log likelihood: -213358.527392
EM: Round [33] log likelihood: -213358.519096
EM: Round [34] log likelihood: -213358.511759
EM: Round [35] log likelihood: -213358.505254
EM: Round [36] log likelihood: -213358.499476
EM: Round [37] log likelihood: -213358.494332
EM: Round [38] log likelihood: -213358.489746
EM: Round [39] log likelihood: -213358.485648
EM: Round [40] log likelihood: -213358.481981
EM: Round [41] log likelihood: -213358.478693
EM: Round [42] log likelihood: -213358.475742
EM: Round [43] log likelihood: -213358.473087
EM: Round [44] log likelihood: -213358.470697
EM: Round [45] log likelihood: -213358.468542
EM: Round [46] log likelihood: -213358.466597
EM: Round [47] log likelihood: -213358.464838
EM: Round [48] log likelihood: -213358.463245
EM: Round [49] log likelihood: -213358.461803
EM: Round [50] log likelihood: -213358.460494
EM: Round [51] log likelihood: -213358.459306
EM: Round [52] log likelihood: -213358.458227
EM: Round [53] log likelihood: -213358.457244
EM: Round [54] log likelihood: -213358.456350
EM: Round [55] log likelihood: -213358.455535
EM: Round [56] log likelihood: -213358.454792
EM: Round [57] log likelihood: -213358.454114
EM: Round [58] log likelihood: -213358.453495
EM: Round [59] log likelihood: -213358.452929
EM: Round [60] log likelihood: -213358.452412
EM: Round [61] log likelihood: -213358.451938
EM: Round [62] log likelihood: -213358.451505
EM: Round [63] log likelihood: -213358.451108
EM: Round [64] log likelihood: -213358.450744
EM: Round [65] log likelihood: -213358.450411
EM: Round [66] log likelihood: -213358.450105
EM: Round [67] log likelihood: -213358.449824
EM: Round [68] log likelihood: -213358.449566
EM: Round [69] log likelihood: -213358.449329
EM: Round [70] log likelihood: -213358.449112
EM: Round [71] log likelihood: -213358.448912
EM: Round [72] log likelihood: -213358.448728
EM: Round [73] log likelihood: -213358.448559
EM: Round [74] log likelihood: -213358.448404
EM: Round [75] log likelihood: -213358.448261
EM: Round [76] log likelihood: -213358.448129
EM: Round [77] log likelihood: -213358.448008
EM: Round [78] log likelihood: -213358.447896
EM: Round [79] log likelihood: -213358.447793
EM: Round [80] log likelihood: -213358.447698
EM: Stopping iterations at round 80 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.pCR6BSb5Pd/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20 --fusion_preds /tmp/nxf.pCR6BSb5Pd/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.pCR6BSb5Pd/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.pCR6BSb5Pd/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.pCR6BSb5Pd/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.pCR6BSb5Pd/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter --genome_lib_dir /tmp/nxf.pCR6BSb5Pd/ctat_genome_lib_build_dir --max_promiscuity 10 --min_pct_dom_promiscuity 20
CMD: cp /tmp/nxf.pCR6BSb5Pd/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.pCR6BSb5Pd/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.pCR6BSb5Pd/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.pCR6BSb5Pd/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.pCR6BSb5Pd/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.pCR6BSb5Pd/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.pCR6BSb5Pd/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 134553217 > /tmp/nxf.pCR6BSb5Pd/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.pCR6BSb5Pd/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.pCR6BSb5Pd/ctat_genome_lib_build_dir > /tmp/nxf.pCR6BSb5Pd/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.pCR6BSb5Pd/ctat_genome_lib_build_dir --annotate /tmp/nxf.pCR6BSb5Pd/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.pCR6BSb5Pd/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.pCR6BSb5Pd/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.pCR6BSb5Pd/ctat_genome_lib_build_dir
-done, see /tmp/nxf.pCR6BSb5Pd/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.pCR6BSb5Pd/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.pCR6BSb5Pd/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 1361, filtered: 11349)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.pCR6BSb5Pd/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.pCR6BSb5Pd/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.pCR6BSb5Pd/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000276538.1]
WARNING, no entry stored in dbm for [ENSG00000224016.2]
WARNING, no entry stored in dbm for [ENSG00000245958.6]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000262801.6]
WARNING, no entry stored in dbm for [ENSG00000228463.10]
WARNING, no entry stored in dbm for [ENSG00000271162.1]
WARNING, no entry stored in dbm for [ENSG00000274712.2]
WARNING, no entry stored in dbm for [ENSG00000285051.2]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000228252.9]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000228252.9]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000236235.1]
WARNING, no entry stored in dbm for [ENSG00000287156.1]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000251314.2]
WARNING, no entry stored in dbm for [ENSG00000272693.4]
WARNING, no entry stored in dbm for [ENSG00000254485.5]
WARNING, no entry stored in dbm for [ENSG00000225594.1]
WARNING, no entry stored in dbm for [ENSG00000226049.3]
WARNING, no entry stored in dbm for [ENSG00000260404.3]
WARNING, no entry stored in dbm for [ENSG00000128438.10]
WARNING, no entry stored in dbm for [ENSG00000228463.10]
WARNING, no entry stored in dbm for [ENSG00000287411.1]
WARNING, no entry stored in dbm for [ENSG00000227681.5]
WARNING, no entry stored in dbm for [ENSG00000230559.1]
WARNING, no entry stored in dbm for [ENSG00000235687.9]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000238054.3]
WARNING, no entry stored in dbm for [ENSG00000229358.3]
WARNING, no entry stored in dbm for [ENSG00000254275.6]
WARNING, no entry stored in dbm for [ENSG00000259755.1]
WARNING, no entry stored in dbm for [ENSG00000158482.10]
WARNING, no entry stored in dbm for [ENSG00000279954.1]
WARNING, no entry stored in dbm for [ENSG00000266373.1]
WARNING, no entry stored in dbm for [ENSG00000259020.3]
WARNING, no entry stored in dbm for [ENSG00000286912.1]
WARNING, no entry stored in dbm for [ENSG00000215158.9]
WARNING, no entry stored in dbm for [ENSG00000284675.1]
WARNING, no entry stored in dbm for [ENSG00000253107.1]
WARNING, no entry stored in dbm for [ENSG00000253107.1]
WARNING, no entry stored in dbm for [ENSG00000186148.13]
WARNING, no entry stored in dbm for [ENSG00000257403.2]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000267623.3]
WARNING, no entry stored in dbm for [ENSG00000281404.2]
WARNING, no entry stored in dbm for [ENSG00000243422.2]
WARNING, no entry stored in dbm for [ENSG00000277977.1]
WARNING, no entry stored in dbm for [ENSG00000204789.4]
WARNING, no entry stored in dbm for [ENSG00000269388.1]
WARNING, no entry stored in dbm for [ENSG00000269540.1]
WARNING, no entry stored in dbm for [ENSG00000227964.1]
WARNING, no entry stored in dbm for [ENSG00000249959.6]
WARNING, no entry stored in dbm for [ENSG00000286339.1]
WARNING, no entry stored in dbm for [ENSG00000236819.2]
WARNING, no entry stored in dbm for [ENSG00000285857.1]
WARNING, no entry stored in dbm for [ENSG00000223403.6]
WARNING, no entry stored in dbm for [ENSG00000234592.1]
WARNING, no entry stored in dbm for [ENSG00000255282.6]
WARNING, no entry stored in dbm for [ENSG00000251992.1]
WARNING, no entry stored in dbm for [ENSG00000274625.1]
WARNING, no entry stored in dbm for [ENSG00000185596.16]
WARNING, no entry stored in dbm for [ENSG00000225292.2]
WARNING, no entry stored in dbm for [ENSG00000205853.12]
WARNING, no entry stored in dbm for [ENSG00000232444.1]
WARNING, no entry stored in dbm for [ENSG00000231290.6]
WARNING, no entry stored in dbm for [ENSG00000259393.2]
WARNING, no entry stored in dbm for [ENSG00000245248.8]
WARNING, no entry stored in dbm for [ENSG00000242435.1]
WARNING, no entry stored in dbm for [ENSG00000078319.10]
WARNING, no entry stored in dbm for [ENSG00000240520.7]
WARNING, no entry stored in dbm for [ENSG00000201298.1]
WARNING, no entry stored in dbm for [ENSG00000231086.1]
WARNING, no entry stored in dbm for [ENSG00000205583.13]
WARNING, no entry stored in dbm for [ENSG00000205913.7]
WARNING, no entry stored in dbm for [ENSG00000227589.1]
WARNING, no entry stored in dbm for [ENSG00000255185.6]
WARNING, no entry stored in dbm for [ENSG00000267686.2]
WARNING, no entry stored in dbm for [ENSG00000211459.2]
WARNING, no entry stored in dbm for [ENSG00000227728.2]
WARNING, no entry stored in dbm for [ENSG00000258754.8]
WARNING, no entry stored in dbm for [ENSG00000125462.19]
WARNING, no entry stored in dbm for [ENSG00000239827.8]
WARNING, no entry stored in dbm for [ENSG00000254842.6]
WARNING, no entry stored in dbm for [ENSG00000230806.1]
WARNING, no entry stored in dbm for [ENSG00000204117.2]
WARNING, no entry stored in dbm for [ENSG00000261670.1]
WARNING, no entry stored in dbm for [ENSG00000276550.4]
WARNING, no entry stored in dbm for [ENSG00000247872.2]
WARNING, no entry stored in dbm for [ENSG00000240350.3]
WARNING, no entry stored in dbm for [ENSG00000242207.1]
WARNING, no entry stored in dbm for [ENSG00000229568.1]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000215790.8]
WARNING, no entry stored in dbm for [ENSG00000267383.7]
WARNING, no entry stored in dbm for [ENSG00000269904.2]
WARNING, no entry stored in dbm for [ENSG00000243396.1]
WARNING, no entry stored in dbm for [ENSG00000241157.1]
WARNING, no entry stored in dbm for [ENSG00000241130.1]
WARNING, no entry stored in dbm for [ENSG00000285413.1]
WARNING, no entry stored in dbm for [ENSG00000230415.1]
WARNING, no entry stored in dbm for [ENSG00000258130.8]
WARNING, no entry stored in dbm for [ENSG00000233836.7]
WARNING, no entry stored in dbm for [ENSG00000224221.1]
WARNING, no entry stored in dbm for [ENSG00000225482.1]
WARNING, no entry stored in dbm for [ENSG00000244692.3]
WARNING, no entry stored in dbm for [ENSG00000243426.3]
WARNING, no entry stored in dbm for [ENSG00000219274.1]
WARNING, no entry stored in dbm for [ENSG00000235685.2]
WARNING, no entry stored in dbm for [ENSG00000232228.1]
WARNING, no entry stored in dbm for [ENSG00000253945.1]
WARNING, no entry stored in dbm for [ENSG00000232858.1]
WARNING, no entry stored in dbm for [ENSG00000229519.2]
WARNING, no entry stored in dbm for [ENSG00000232858.1]
WARNING, no entry stored in dbm for [ENSG00000240328.1]
WARNING, no entry stored in dbm for [ENSG00000237930.1]
WARNING, no entry stored in dbm for [ENSG00000213598.4]
WARNING, no entry stored in dbm for [ENSG00000235420.7]
WARNING, no entry stored in dbm for [ENSG00000242888.1]
WARNING, no entry stored in dbm for [ENSG00000225404.2]
WARNING, no entry stored in dbm for [ENSG00000244708.1]
WARNING, no entry stored in dbm for [ENSG00000180211.5]
WARNING, no entry stored in dbm for [ENSG00000232873.1]
WARNING, no entry stored in dbm for [ENSG00000237450.5]
WARNING, no entry stored in dbm for [ENSG00000227875.2]
WARNING, no entry stored in dbm for [ENSG00000235315.2]
WARNING, no entry stored in dbm for [ENSG00000223508.5]
WARNING, no entry stored in dbm for [ENSG00000218300.1]
WARNING, no entry stored in dbm for [ENSG00000213178.3]
WARNING, no entry stored in dbm for [ENSG00000234524.1]
WARNING, no entry stored in dbm for [ENSG00000229824.1]
WARNING, no entry stored in dbm for [ENSG00000225350.1]
WARNING, no entry stored in dbm for [ENSG00000206587.1]
WARNING, no entry stored in dbm for [ENSG00000232643.2]
WARNING, no entry stored in dbm for [ENSG00000278147.1]
WARNING, no entry stored in dbm for [ENSG00000258384.1]
WARNING, no entry stored in dbm for [ENSG00000277270.2]
WARNING, no entry stored in dbm for [ENSG00000233836.7]
WARNING, no entry stored in dbm for [ENSG00000230316.7]
WARNING, no entry stored in dbm for [ENSG00000227354.7]
WARNING, no entry stored in dbm for [ENSG00000284391.1]
WARNING, no entry stored in dbm for [ENSG00000254461.1]
WARNING, no entry stored in dbm for [ENSG00000255105.1]
WARNING, no entry stored in dbm for [ENSG00000259020.3]
WARNING, no entry stored in dbm for [ENSG00000146521.10]
WARNING, no entry stored in dbm for [ENSG00000284448.1]
WARNING, no entry stored in dbm for [ENSG00000237609.1]
WARNING, no entry stored in dbm for [ENSG00000258926.2]
WARNING, no entry stored in dbm for [ENSG00000203739.4]
WARNING, no entry stored in dbm for [ENSG00000273106.1]
WARNING, no entry stored in dbm for [ENSG00000214975.4]
WARNING, no entry stored in dbm for [ENSG00000230590.11]
WARNING, no entry stored in dbm for [ENSG00000234996.4]
WARNING, no entry stored in dbm for [ENSG00000228546.2]
WARNING, no entry stored in dbm for [ENSG00000250778.1]
WARNING, no entry stored in dbm for [ENSG00000229036.7]
WARNING, no entry stored in dbm for [ENSG00000235421.1]
WARNING, no entry stored in dbm for [ENSG00000273328.5]
WARNING, no entry stored in dbm for [ENSG00000200156.1]
WARNING, no entry stored in dbm for [ENSG00000199568.1]
WARNING, no entry stored in dbm for [ENSG00000273125.2]
WARNING, no entry stored in dbm for [ENSG00000259133.5]
WARNING, no entry stored in dbm for [ENSG00000254539.1]
WARNING, no entry stored in dbm for [ENSG00000229739.4]
WARNING, no entry stored in dbm for [ENSG00000179818.14]
WARNING, no entry stored in dbm for [ENSG00000203799.13]
WARNING, no entry stored in dbm for [ENSG00000267080.6]
WARNING, no entry stored in dbm for [ENSG00000257940.1]
WARNING, no entry stored in dbm for [ENSG00000286504.1]
WARNING, no entry stored in dbm for [ENSG00000258244.1]
WARNING, no entry stored in dbm for [ENSG00000229254.1]
WARNING, no entry stored in dbm for [ENSG00000238152.2]
WARNING, no entry stored in dbm for [ENSG00000284707.2]
WARNING, no entry stored in dbm for [ENSG00000229127.2]
WARNING, no entry stored in dbm for [ENSG00000254896.1]
WARNING, no entry stored in dbm for [ENSG00000223705.9]
WARNING, no entry stored in dbm for [ENSG00000266379.6]
WARNING, no entry stored in dbm for [ENSG00000225159.1]
WARNING, no entry stored in dbm for [ENSG00000237445.2]
WARNING, no entry stored in dbm for [ENSG00000237356.7]
WARNING, no entry stored in dbm for [ENSG00000135502.19]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000249752.1]
WARNING, no entry stored in dbm for [ENSG00000203825.4]
WARNING, no entry stored in dbm for [ENSG00000203825.4]
WARNING, no entry stored in dbm for [ENSG00000203825.4]
WARNING, no entry stored in dbm for [ENSG00000203825.4]
WARNING, no entry stored in dbm for [ENSG00000286119.1]
WARNING, no entry stored in dbm for [ENSG00000280441.3]
WARNING, no entry stored in dbm for [ENSG00000280441.3]
WARNING, no entry stored in dbm for [ENSG00000228323.2]
WARNING, no entry stored in dbm for [ENSG00000288531.1]
WARNING, no entry stored in dbm for [ENSG00000258526.7]
WARNING, no entry stored in dbm for [ENSG00000198804.2]
WARNING, no entry stored in dbm for [ENSG00000214955.5]
WARNING, no entry stored in dbm for [ENSG00000214955.5]
WARNING, no entry stored in dbm for [ENSG00000227769.7]
WARNING, no entry stored in dbm for [ENSG00000172965.17]
WARNING, no entry stored in dbm for [ENSG00000233673.7]
WARNING, no entry stored in dbm for [ENSG00000172965.17]
WARNING, no entry stored in dbm for [ENSG00000204745.4]
WARNING, no entry stored in dbm for [ENSG00000261738.7]
WARNING, no entry stored in dbm for [ENSG00000233006.8]
WARNING, no entry stored in dbm for [ENSG00000218537.1]
WARNING, no entry stored in dbm for [ENSG00000271937.1]
WARNING, no entry stored in dbm for [ENSG00000286236.1]
WARNING, no entry stored in dbm for [ENSG00000213117.4]
WARNING, no entry stored in dbm for [ENSG00000242326.1]
WARNING, no entry stored in dbm for [ENSG00000214223.4]
WARNING, no entry stored in dbm for [ENSG00000275716.1]
WARNING, no entry stored in dbm for [ENSG00000235485.1]
WARNING, no entry stored in dbm for [ENSG00000248391.6]
WARNING, no entry stored in dbm for [ENSG00000233421.4]
WARNING, no entry stored in dbm for [ENSG00000249484.9]
WARNING, no entry stored in dbm for [ENSG00000247157.7]
WARNING, no entry stored in dbm for [ENSG00000281912.1]
WARNING, no entry stored in dbm for [ENSG00000228794.10]
WARNING, no entry stored in dbm for [ENSG00000281202.2]
WARNING, no entry stored in dbm for [ENSG00000267603.1]
WARNING, no entry stored in dbm for [ENSG00000282508.2]
WARNING, no entry stored in dbm for [ENSG00000235687.9]
WARNING, no entry stored in dbm for [ENSG00000235687.9]
WARNING, no entry stored in dbm for [ENSG00000237248.5]
WARNING, no entry stored in dbm for [ENSG00000231419.6]
WARNING, no entry stored in dbm for [ENSG00000203930.12]
WARNING, no entry stored in dbm for [ENSG00000218175.2]
WARNING, no entry stored in dbm for [ENSG00000205266.10]
WARNING, no entry stored in dbm for [ENSG00000287044.1]
WARNING, no entry stored in dbm for [ENSG00000263647.1]
WARNING, no entry stored in dbm for [ENSG00000287252.1]
WARNING, no entry stored in dbm for [ENSG00000201364.1]
WARNING, no entry stored in dbm for [ENSG00000226648.2]
WARNING, no entry stored in dbm for [ENSG00000273024.6]
WARNING, no entry stored in dbm for [ENSG00000250742.4]
WARNING, no entry stored in dbm for [ENSG00000269019.2]
WARNING, no entry stored in dbm for [ENSG00000266828.2]
WARNING, no entry stored in dbm for [ENSG00000225851.1]
WARNING, no entry stored in dbm for [ENSG00000225851.1]
WARNING, no entry stored in dbm for [ENSG00000206341.7]
WARNING, no entry stored in dbm for [ENSG00000225851.1]
WARNING, no entry stored in dbm for [ENSG00000233606.2]
WARNING, no entry stored in dbm for [ENSG00000233606.2]
WARNING, no entry stored in dbm for [ENSG00000287390.1]
WARNING, no entry stored in dbm for [ENSG00000248785.1]
WARNING, no entry stored in dbm for [ENSG00000237303.2]
WARNING, no entry stored in dbm for [ENSG00000215866.8]
WARNING, no entry stored in dbm for [ENSG00000276550.4]
WARNING, no entry stored in dbm for [ENSG00000227038.3]
WARNING, no entry stored in dbm for [ENSG00000229180.7]
WARNING, no entry stored in dbm for [ENSG00000270087.5]
WARNING, no entry stored in dbm for [ENSG00000285190.1]
WARNING, no entry stored in dbm for [ENSG00000262488.1]
WARNING, no entry stored in dbm for [ENSG00000131002.12]
WARNING, no entry stored in dbm for [ENSG00000204091.8]
WARNING, no entry stored in dbm for [ENSG00000271333.1]
WARNING, no entry stored in dbm for [ENSG00000286182.1]
WARNING, no entry stored in dbm for [ENSG00000166104.15]
WARNING, no entry stored in dbm for [ENSG00000166104.15]
WARNING, no entry stored in dbm for [ENSG00000250903.9]
WARNING, no entry stored in dbm for [ENSG00000237638.2]
WARNING, no entry stored in dbm for [ENSG00000228076.2]
WARNING, no entry stored in dbm for [ENSG00000230937.12]
WARNING, no entry stored in dbm for [ENSG00000226478.3]
WARNING, no entry stored in dbm for [ENSG00000216624.3]
WARNING, no entry stored in dbm for [ENSG00000213362.3]
WARNING, no entry stored in dbm for [ENSG00000258960.1]
WARNING, no entry stored in dbm for [ENSG00000259345.7]
WARNING, no entry stored in dbm for [ENSG00000257167.2]
WARNING, no entry stored in dbm for [ENSG00000280441.3]
WARNING, no entry stored in dbm for [ENSG00000215483.11]
WARNING, no entry stored in dbm for [ENSG00000249519.1]
WARNING, no entry stored in dbm for [ENSG00000204832.10]
WARNING, no entry stored in dbm for [ENSG00000227751.1]
WARNING, no entry stored in dbm for [ENSG00000248290.1]
WARNING, no entry stored in dbm for [ENSG00000233334.3]
WARNING, no entry stored in dbm for [ENSG00000231528.3]
WARNING, no entry stored in dbm for [ENSG00000248019.3]
WARNING, no entry stored in dbm for [ENSG00000287111.1]
WARNING, no entry stored in dbm for [ENSG00000275374.1]
WARNING, no entry stored in dbm for [ENSG00000199672.1]
WARNING, no entry stored in dbm for [ENSG00000242686.4]
WARNING, no entry stored in dbm for [ENSG00000237220.1]
WARNING, no entry stored in dbm for [ENSG00000268120.1]
WARNING, no entry stored in dbm for [ENSG00000229140.11]
WARNING, no entry stored in dbm for [ENSG00000244306.11]
WARNING, no entry stored in dbm for [ENSG00000186704.9]
WARNING, no entry stored in dbm for [ENSG00000245750.10]
WARNING, no entry stored in dbm for [ENSG00000215908.10]
WARNING, no entry stored in dbm for [ENSG00000279277.2]
WARNING, no entry stored in dbm for [ENSG00000225632.1]
WARNING, no entry stored in dbm for [ENSG00000273032.3]
WARNING, no entry stored in dbm for [ENSG00000231871.5]
WARNING, no entry stored in dbm for [ENSG00000204706.14]
WARNING, no entry stored in dbm for [ENSG00000231808.2]
WARNING, no entry stored in dbm for [ENSG00000260807.7]
WARNING, no entry stored in dbm for [ENSG00000261426.1]
WARNING, no entry stored in dbm for [ENSG00000286502.1]
WARNING, no entry stored in dbm for [ENSG00000287070.1]
WARNING, no entry stored in dbm for [ENSG00000204261.9]
WARNING, no entry stored in dbm for [ENSG00000258018.2]
WARNING, no entry stored in dbm for [ENSG00000100058.12]
WARNING, no entry stored in dbm for [ENSG00000100058.12]
WARNING, no entry stored in dbm for [ENSG00000282798.1]
WARNING, no entry stored in dbm for [ENSG00000260398.1]
WARNING, no entry stored in dbm for [ENSG00000276997.4]
WARNING, no entry stored in dbm for [ENSG00000251022.6]
WARNING, no entry stored in dbm for [ENSG00000237484.6]
WARNING, no entry stored in dbm for [ENSG00000254786.1]
WARNING, no entry stored in dbm for [ENSG00000279080.1]
WARNING, no entry stored in dbm for [ENSG00000226287.8]
WARNING, no entry stored in dbm for [ENSG00000261781.1]
WARNING, no entry stored in dbm for [ENSG00000285632.1]
WARNING, no entry stored in dbm for [ENSG00000230102.8]
WARNING, no entry stored in dbm for [ENSG00000215117.6]
WARNING, no entry stored in dbm for [ENSG00000244701.1]
WARNING, no entry stored in dbm for [ENSG00000219722.1]
WARNING, no entry stored in dbm for [ENSG00000242299.1]
WARNING, no entry stored in dbm for [ENSG00000222958.1]
WARNING, no entry stored in dbm for [ENSG00000146556.14]
WARNING, no entry stored in dbm for [ENSG00000228544.1]
WARNING, no entry stored in dbm for [ENSG00000220635.2]
WARNING, no entry stored in dbm for [ENSG00000222012.1]
WARNING, no entry stored in dbm for [ENSG00000222012.1]
WARNING, no entry stored in dbm for [ENSG00000205488.9]
WARNING, no entry stored in dbm for [ENSG00000286539.1]
WARNING, no entry stored in dbm for [ENSG00000188511.12]
WARNING, no entry stored in dbm for [ENSG00000239556.4]
WARNING, no entry stored in dbm for [ENSG00000177553.6]
WARNING, no entry stored in dbm for [ENSG00000233184.7]
WARNING, no entry stored in dbm for [ENSG00000224924.7]
WARNING, no entry stored in dbm for [ENSG00000251545.2]
WARNING, no entry stored in dbm for [ENSG00000270025.2]
WARNING, no entry stored in dbm for [ENSG00000243289.1]
WARNING, no entry stored in dbm for [ENSG00000204177.10]
WARNING, no entry stored in dbm for [ENSG00000169668.11]
WARNING, no entry stored in dbm for [ENSG00000246316.8]
WARNING, no entry stored in dbm for [ENSG00000285958.1]
WARNING, no entry stored in dbm for [ENSG00000204959.4]
WARNING, no entry stored in dbm for [ENSG00000272631.1]
WARNING, no entry stored in dbm for [ENSG00000287709.1]
WARNING, no entry stored in dbm for [ENSG00000243062.6]
WARNING, no entry stored in dbm for [ENSG00000161912.18]
WARNING, no entry stored in dbm for [ENSG00000263618.5]
WARNING, no entry stored in dbm for [ENSG00000285769.2]
WARNING, no entry stored in dbm for [ENSG00000254837.2]
WARNING, no entry stored in dbm for [ENSG00000224905.7]
WARNING, no entry stored in dbm for [ENSG00000215559.8]
WARNING, no entry stored in dbm for [ENSG00000261019.1]
WARNING, no entry stored in dbm for [ENSG00000188399.5]
WARNING, no entry stored in dbm for [ENSG00000249493.1]
WARNING, no entry stored in dbm for [ENSG00000206192.7]
WARNING, no entry stored in dbm for [ENSG00000223774.5]
WARNING, no entry stored in dbm for [ENSG00000204049.1]
WARNING, no entry stored in dbm for [ENSG00000235749.3]
WARNING, no entry stored in dbm for [ENSG00000231398.1]
WARNING, no entry stored in dbm for [ENSG00000286109.1]
WARNING, no entry stored in dbm for [ENSG00000286842.1]
WARNING, no entry stored in dbm for [ENSG00000285520.1]
WARNING, no entry stored in dbm for [ENSG00000215580.11]
WARNING, no entry stored in dbm for [ENSG00000230779.1]
WARNING, no entry stored in dbm for [ENSG00000228830.1]
WARNING, no entry stored in dbm for [ENSG00000228830.1]
WARNING, no entry stored in dbm for [ENSG00000130600.19]
WARNING, no entry stored in dbm for [ENSG00000230490.3]
WARNING, no entry stored in dbm for [ENSG00000271075.1]
WARNING, no entry stored in dbm for [ENSG00000228997.1]
WARNING, no entry stored in dbm for [ENSG00000270038.1]
WARNING, no entry stored in dbm for [ENSG00000245261.1]
WARNING, no entry stored in dbm for [ENSG00000228793.2]
WARNING, no entry stored in dbm for [ENSG00000261641.2]
WARNING, no entry stored in dbm for [ENSG00000226310.1]
WARNING, no entry stored in dbm for [ENSG00000285646.2]
WARNING, no entry stored in dbm for [ENSG00000265018.6]
WARNING, no entry stored in dbm for [ENSG00000230869.1]
WARNING, no entry stored in dbm for [ENSG00000204177.10]
WARNING, no entry stored in dbm for [ENSG00000231713.2]
WARNING, no entry stored in dbm for [ENSG00000224016.2]
WARNING, no entry stored in dbm for [ENSG00000213763.4]
WARNING, no entry stored in dbm for [ENSG00000276216.1]
WARNING, no entry stored in dbm for [ENSG00000225370.1]
WARNING, no entry stored in dbm for [ENSG00000277702.1]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000275902.1]
WARNING, no entry stored in dbm for [ENSG00000215158.9]
WARNING, no entry stored in dbm for [ENSG00000229930.1]
WARNING, no entry stored in dbm for [ENSG00000250999.2]
WARNING, no entry stored in dbm for [ENSG00000278212.2]
WARNING, no entry stored in dbm for [ENSG00000214135.8]
WARNING, no entry stored in dbm for [ENSG00000253678.3]
WARNING, no entry stored in dbm for [ENSG00000255454.1]
WARNING, no entry stored in dbm for [ENSG00000236468.1]
WARNING, no entry stored in dbm for [ENSG00000277096.1]
WARNING, no entry stored in dbm for [ENSG00000261613.2]
WARNING, no entry stored in dbm for [ENSG00000241596.1]
WARNING, no entry stored in dbm for [ENSG00000251250.3]
WARNING, no entry stored in dbm for [ENSG00000259418.1]
WARNING, no entry stored in dbm for [ENSG00000259418.1]
WARNING, no entry stored in dbm for [ENSG00000286426.1]
WARNING, no entry stored in dbm for [ENSG00000261879.7]
WARNING, no entry stored in dbm for [ENSG00000261879.7]
WARNING, no entry stored in dbm for [ENSG00000242299.1]
WARNING, no entry stored in dbm for [ENSG00000249072.1]
WARNING, no entry stored in dbm for [ENSG00000288663.1]
WARNING, no entry stored in dbm for [ENSG00000275223.1]
WARNING, no entry stored in dbm for [ENSG00000234129.8]
WARNING, no entry stored in dbm for [ENSG00000226999.1]
WARNING, no entry stored in dbm for [ENSG00000239985.2]
WARNING, no entry stored in dbm for [ENSG00000225807.2]
WARNING, no entry stored in dbm for [ENSG00000257337.7]
WARNING, no entry stored in dbm for [ENSG00000259299.1]
WARNING, no entry stored in dbm for [ENSG00000267002.4]
WARNING, no entry stored in dbm for [ENSG00000259426.6]
WARNING, no entry stored in dbm for [ENSG00000248223.1]
WARNING, no entry stored in dbm for [ENSG00000235140.2]
WARNING, no entry stored in dbm for [ENSG00000288079.1]
WARNING, no entry stored in dbm for [ENSG00000251131.2]
WARNING, no entry stored in dbm for [ENSG00000259429.5]
WARNING, no entry stored in dbm for [ENSG00000288545.1]
WARNING, no entry stored in dbm for [ENSG00000254777.5]
WARNING, no entry stored in dbm for [ENSG00000233223.3]
WARNING, no entry stored in dbm for [ENSG00000285106.2]
WARNING, no entry stored in dbm for [ENSG00000267422.1]
WARNING, no entry stored in dbm for [ENSG00000186148.13]
WARNING, no entry stored in dbm for [ENSG00000249839.1]
WARNING, no entry stored in dbm for [ENSG00000236510.1]
WARNING, no entry stored in dbm for [ENSG00000236510.1]
WARNING, no entry stored in dbm for [ENSG00000236510.1]
WARNING, no entry stored in dbm for [ENSG00000286481.1]
WARNING, no entry stored in dbm for [ENSG00000231539.1]
WARNING, no entry stored in dbm for [ENSG00000279598.1]
WARNING, no entry stored in dbm for [ENSG00000250848.1]
WARNING, no entry stored in dbm for [ENSG00000259952.1]
WARNING, no entry stored in dbm for [ENSG00000214331.8]
WARNING, no entry stored in dbm for [ENSG00000248406.1]
WARNING, no entry stored in dbm for [ENSG00000267243.6]
WARNING, no entry stored in dbm for [ENSG00000233448.2]
WARNING, no entry stored in dbm for [ENSG00000267623.3]
WARNING, no entry stored in dbm for [ENSG00000239556.4]
WARNING, no entry stored in dbm for [ENSG00000241057.2]
WARNING, no entry stored in dbm for [ENSG00000254610.3]
WARNING, no entry stored in dbm for [ENSG00000248618.1]
WARNING, no entry stored in dbm for [ENSG00000268163.1]
WARNING, no entry stored in dbm for [ENSG00000269504.3]
WARNING, no entry stored in dbm for [ENSG00000254319.6]
WARNING, no entry stored in dbm for [ENSG00000215458.8]
WARNING, no entry stored in dbm for [ENSG00000271394.1]
WARNING, no entry stored in dbm for [ENSG00000222313.1]
* STAR-Fusion complete. See output: /tmp/nxf.pCR6BSb5Pd/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)