File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3e/e00fb722bd8a15a02a4dd5f224abd4/.command.err
Size
310.6 KB
Attempt
Using GATK jar /usr/local/share/gatk4-4.4.0.0-0/gatk-package-4.4.0.0-local.jar
Running:
    java -Dsamjdk.use_async_io_read_samtools=false -Dsamjdk.use_async_io_write_samtools=true -Dsamjdk.use_async_io_write_tribble=false -Dsamjdk.compression_level=2 -Xmx60620M -XX:-UsePerfData -XX:ParallelGCThreads=2 -jar /usr/local/share/gatk4-4.4.0.0-0/gatk-package-4.4.0.0-local.jar MarkDuplicates --INPUT aih-tih-sc-1ffee4-R1_A23WJ53LT4_1.Aligned.sortedByCoord.out.bam --OUTPUT aih-tih-sc-1ffee4-R1_A23WJ53LT4_1.md.bam --METRICS_FILE aih-tih-sc-1ffee4-R1_A23WJ53LT4_1.md.bam.metrics --TMP_DIR . --CREATE_INDEX true --REFERENCE_SEQUENCE ref_genome.fa -REMOVE_DUPLICATES false -VALIDATION_STRINGENCY LENIENT
08:48:54.425 INFO  NativeLibraryLoader - Loading libgkl_compression.so from jar:file:/usr/local/share/gatk4-4.4.0.0-0/gatk-package-4.4.0.0-local.jar!/com/intel/gkl/native/libgkl_compression.so
[Mon Jun 08 08:48:54 GMT 2026] MarkDuplicates --INPUT aih-tih-sc-1ffee4-R1_A23WJ53LT4_1.Aligned.sortedByCoord.out.bam --OUTPUT aih-tih-sc-1ffee4-R1_A23WJ53LT4_1.md.bam --METRICS_FILE aih-tih-sc-1ffee4-R1_A23WJ53LT4_1.md.bam.metrics --REMOVE_DUPLICATES false --TMP_DIR . --VALIDATION_STRINGENCY LENIENT --CREATE_INDEX true --REFERENCE_SEQUENCE ref_genome.fa --MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP 50000 --MAX_FILE_HANDLES_FOR_READ_ENDS_MAP 8000 --SORTING_COLLECTION_SIZE_RATIO 0.25 --TAG_DUPLICATE_SET_MEMBERS false --REMOVE_SEQUENCING_DUPLICATES false --TAGGING_POLICY DontTag --CLEAR_DT true --DUPLEX_UMI false --FLOW_MODE false --FLOW_QUALITY_SUM_STRATEGY false --USE_END_IN_UNPAIRED_READS false --USE_UNPAIRED_CLIPPED_END false --UNPAIRED_END_UNCERTAINTY 0 --FLOW_SKIP_FIRST_N_FLOWS 0 --FLOW_Q_IS_KNOWN_END false --FLOW_EFFECTIVE_QUALITY_THRESHOLD 15 --ADD_PG_TAG_TO_READS true --ASSUME_SORTED false --DUPLICATE_SCORING_STRATEGY SUM_OF_BASE_QUALITIES --PROGRAM_RECORD_ID MarkDuplicates --PROGRAM_GROUP_NAME MarkDuplicates --READ_NAME_REGEX <optimized capture of last three ':' separated fields as numeric values> --OPTICAL_DUPLICATE_PIXEL_DISTANCE 100 --MAX_OPTICAL_DUPLICATE_SET_SIZE 300000 --VERBOSITY INFO --QUIET false --COMPRESSION_LEVEL 2 --MAX_RECORDS_IN_RAM 500000 --CREATE_MD5_FILE false --help false --version false --showHidden false --USE_JDK_DEFLATER false --USE_JDK_INFLATER false
[Mon Jun 08 08:48:54 GMT 2026] Executing as ?@nf-3ee00fb722bd8a15a02a4dd5f224abd4-3a42a-w8bf7 on Linux 6.12.88 amd64; OpenJDK 64-Bit Server VM 17.0.3-internal+0-adhoc..src; Deflater: Intel; Inflater: Intel; Provider GCS is available; Picard version: Version:4.4.0.0
INFO	2026-06-08 08:48:54	MarkDuplicates	Start of doWork freeMemory: 105830816; totalMemory: 134217728; maxMemory: 63585648640
INFO	2026-06-08 08:48:54	MarkDuplicates	Reading input file and constructing read end information.
INFO	2026-06-08 08:48:54	MarkDuplicates	Will retain up to 230382784 data points before spilling to disk.
INFO	2026-06-08 08:48:58	MarkDuplicates	Read     1,000,000 records.  Elapsed time: 00:00:02s.  Time for last 1,000,000:    2s.  Last read position: chr1:1,353,814
INFO	2026-06-08 08:48:58	MarkDuplicates	Tracking 3403 as yet unmatched pairs. 1287 records in RAM.
INFO	2026-06-08 08:49:00	MarkDuplicates	Read     2,000,000 records.  Elapsed time: 00:00:04s.  Time for last 1,000,000:    1s.  Last read position: chr1:2,588,958
INFO	2026-06-08 08:49:00	MarkDuplicates	Tracking 4618 as yet unmatched pairs. 292 records in RAM.
INFO	2026-06-08 08:49:02	MarkDuplicates	Read     3,000,000 records.  Elapsed time: 00:00:06s.  Time for last 1,000,000:    1s.  Last read position: chr1:8,362,822
INFO	2026-06-08 08:49:02	MarkDuplicates	Tracking 6902 as yet unmatched pairs. 490 records in RAM.
INFO	2026-06-08 08:49:04	MarkDuplicates	Read     4,000,000 records.  Elapsed time: 00:00:08s.  Time for last 1,000,000:    1s.  Last read position: chr1:11,747,454
INFO	2026-06-08 08:49:04	MarkDuplicates	Tracking 8851 as yet unmatched pairs. 546 records in RAM.
INFO	2026-06-08 08:49:06	MarkDuplicates	Read     5,000,000 records.  Elapsed time: 00:00:10s.  Time for last 1,000,000:    2s.  Last read position: chr1:15,933,751
INFO	2026-06-08 08:49:06	MarkDuplicates	Tracking 10415 as yet unmatched pairs. 289 records in RAM.
INFO	2026-06-08 08:49:08	MarkDuplicates	Read     6,000,000 records.  Elapsed time: 00:00:12s.  Time for last 1,000,000:    1s.  Last read position: chr1:19,139,145
INFO	2026-06-08 08:49:08	MarkDuplicates	Tracking 12439 as yet unmatched pairs. 539 records in RAM.
INFO	2026-06-08 08:49:10	MarkDuplicates	Read     7,000,000 records.  Elapsed time: 00:00:14s.  Time for last 1,000,000:    1s.  Last read position: chr1:21,235,887
INFO	2026-06-08 08:49:10	MarkDuplicates	Tracking 14199 as yet unmatched pairs. 475 records in RAM.
INFO	2026-06-08 08:49:12	MarkDuplicates	Read     8,000,000 records.  Elapsed time: 00:00:16s.  Time for last 1,000,000:    2s.  Last read position: chr1:21,864,171
INFO	2026-06-08 08:49:12	MarkDuplicates	Tracking 17901 as yet unmatched pairs. 2116 records in RAM.
INFO	2026-06-08 08:49:14	MarkDuplicates	Read     9,000,000 records.  Elapsed time: 00:00:18s.  Time for last 1,000,000:    1s.  Last read position: chr1:23,321,611
INFO	2026-06-08 08:49:14	MarkDuplicates	Tracking 18410 as yet unmatched pairs. 661 records in RAM.
INFO	2026-06-08 08:49:16	MarkDuplicates	Read    10,000,000 records.  Elapsed time: 00:00:20s.  Time for last 1,000,000:    1s.  Last read position: chr1:26,558,869
INFO	2026-06-08 08:49:16	MarkDuplicates	Tracking 19523 as yet unmatched pairs. 91 records in RAM.
INFO	2026-06-08 08:49:17	MarkDuplicates	Read    11,000,000 records.  Elapsed time: 00:00:21s.  Time for last 1,000,000:    1s.  Last read position: chr1:28,742,640
INFO	2026-06-08 08:49:17	MarkDuplicates	Tracking 22042 as yet unmatched pairs. 715 records in RAM.
INFO	2026-06-08 08:49:19	MarkDuplicates	Read    12,000,000 records.  Elapsed time: 00:00:23s.  Time for last 1,000,000:    1s.  Last read position: chr1:31,691,299
INFO	2026-06-08 08:49:19	MarkDuplicates	Tracking 25888 as yet unmatched pairs. 2575 records in RAM.
INFO	2026-06-08 08:49:21	MarkDuplicates	Read    13,000,000 records.  Elapsed time: 00:00:24s.  Time for last 1,000,000:    1s.  Last read position: chr1:32,942,327
INFO	2026-06-08 08:49:21	MarkDuplicates	Tracking 25365 as yet unmatched pairs. 188 records in RAM.
INFO	2026-06-08 08:49:22	MarkDuplicates	Read    14,000,000 records.  Elapsed time: 00:00:26s.  Time for last 1,000,000:    1s.  Last read position: chr1:36,286,584
INFO	2026-06-08 08:49:22	MarkDuplicates	Tracking 27980 as yet unmatched pairs. 798 records in RAM.
INFO	2026-06-08 08:49:24	MarkDuplicates	Read    15,000,000 records.  Elapsed time: 00:00:27s.  Time for last 1,000,000:    1s.  Last read position: chr1:39,435,615
INFO	2026-06-08 08:49:24	MarkDuplicates	Tracking 29194 as yet unmatched pairs. 138 records in RAM.
INFO	2026-06-08 08:49:26	MarkDuplicates	Read    16,000,000 records.  Elapsed time: 00:00:30s.  Time for last 1,000,000:    2s.  Last read position: chr1:42,927,720
INFO	2026-06-08 08:49:26	MarkDuplicates	Tracking 31065 as yet unmatched pairs. 267 records in RAM.
INFO	2026-06-08 08:49:29	MarkDuplicates	Read    17,000,000 records.  Elapsed time: 00:00:32s.  Time for last 1,000,000:    2s.  Last read position: chr1:44,632,374
INFO	2026-06-08 08:49:29	MarkDuplicates	Tracking 33011 as yet unmatched pairs. 323 records in RAM.
INFO	2026-06-08 08:49:31	MarkDuplicates	Read    18,000,000 records.  Elapsed time: 00:00:35s.  Time for last 1,000,000:    2s.  Last read position: chr1:46,885,571
INFO	2026-06-08 08:49:31	MarkDuplicates	Tracking 34684 as yet unmatched pairs. 292 records in RAM.
INFO	2026-06-08 08:49:33	MarkDuplicates	Read    19,000,000 records.  Elapsed time: 00:00:36s.  Time for last 1,000,000:    1s.  Last read position: chr1:53,210,402
INFO	2026-06-08 08:49:33	MarkDuplicates	Tracking 36237 as yet unmatched pairs. 154 records in RAM.
INFO	2026-06-08 08:49:34	MarkDuplicates	Read    20,000,000 records.  Elapsed time: 00:00:38s.  Time for last 1,000,000:    1s.  Last read position: chr1:64,632,673
INFO	2026-06-08 08:49:34	MarkDuplicates	Tracking 37920 as yet unmatched pairs. 200 records in RAM.
INFO	2026-06-08 08:49:36	MarkDuplicates	Read    21,000,000 records.  Elapsed time: 00:00:39s.  Time for last 1,000,000:    1s.  Last read position: chr1:84,244,485
INFO	2026-06-08 08:49:36	MarkDuplicates	Tracking 39399 as yet unmatched pairs. 49 records in RAM.
INFO	2026-06-08 08:49:37	MarkDuplicates	Read    22,000,000 records.  Elapsed time: 00:00:41s.  Time for last 1,000,000:    1s.  Last read position: chr1:93,876,690
INFO	2026-06-08 08:49:37	MarkDuplicates	Tracking 41385 as yet unmatched pairs. 323 records in RAM.
INFO	2026-06-08 08:49:39	MarkDuplicates	Read    23,000,000 records.  Elapsed time: 00:00:42s.  Time for last 1,000,000:    1s.  Last read position: chr1:108,934,882
INFO	2026-06-08 08:49:39	MarkDuplicates	Tracking 42768 as yet unmatched pairs. 228 records in RAM.
INFO	2026-06-08 08:49:40	MarkDuplicates	Read    24,000,000 records.  Elapsed time: 00:00:44s.  Time for last 1,000,000:    1s.  Last read position: chr1:111,192,202
INFO	2026-06-08 08:49:40	MarkDuplicates	Tracking 44509 as yet unmatched pairs. 263 records in RAM.
INFO	2026-06-08 08:49:42	MarkDuplicates	Read    25,000,000 records.  Elapsed time: 00:00:46s.  Time for last 1,000,000:    1s.  Last read position: chr1:114,581,352
INFO	2026-06-08 08:49:42	MarkDuplicates	Tracking 46010 as yet unmatched pairs. 65 records in RAM.
INFO	2026-06-08 08:49:43	MarkDuplicates	Read    26,000,000 records.  Elapsed time: 00:00:47s.  Time for last 1,000,000:    1s.  Last read position: chr1:119,915,684
INFO	2026-06-08 08:49:43	MarkDuplicates	Tracking 50441 as yet unmatched pairs. 2770 records in RAM.
INFO	2026-06-08 08:49:45	MarkDuplicates	Read    27,000,000 records.  Elapsed time: 00:00:49s.  Time for last 1,000,000:    1s.  Last read position: chr1:119,966,461
INFO	2026-06-08 08:49:45	MarkDuplicates	Tracking 54201 as yet unmatched pairs. 4926 records in RAM.
INFO	2026-06-08 08:49:46	MarkDuplicates	Read    28,000,000 records.  Elapsed time: 00:00:50s.  Time for last 1,000,000:    1s.  Last read position: chr1:144,423,234
INFO	2026-06-08 08:49:46	MarkDuplicates	Tracking 50335 as yet unmatched pairs. 118 records in RAM.
INFO	2026-06-08 08:49:48	MarkDuplicates	Read    29,000,000 records.  Elapsed time: 00:00:51s.  Time for last 1,000,000:    1s.  Last read position: chr1:146,139,997
INFO	2026-06-08 08:49:48	MarkDuplicates	Tracking 51904 as yet unmatched pairs. 815 records in RAM.
INFO	2026-06-08 08:49:49	MarkDuplicates	Read    30,000,000 records.  Elapsed time: 00:00:53s.  Time for last 1,000,000:    1s.  Last read position: chr1:148,550,707
INFO	2026-06-08 08:49:49	MarkDuplicates	Tracking 52053 as yet unmatched pairs. 182 records in RAM.
INFO	2026-06-08 08:49:50	MarkDuplicates	Read    31,000,000 records.  Elapsed time: 00:00:54s.  Time for last 1,000,000:    1s.  Last read position: chr1:149,463,760
INFO	2026-06-08 08:49:50	MarkDuplicates	Tracking 53061 as yet unmatched pairs. 553 records in RAM.
INFO	2026-06-08 08:49:51	MarkDuplicates	Read    32,000,000 records.  Elapsed time: 00:00:55s.  Time for last 1,000,000:    1s.  Last read position: chr1:150,577,346
INFO	2026-06-08 08:49:51	MarkDuplicates	Tracking 55952 as yet unmatched pairs. 2167 records in RAM.
INFO	2026-06-08 08:49:54	MarkDuplicates	Read    33,000,000 records.  Elapsed time: 00:00:58s.  Time for last 1,000,000:    2s.  Last read position: chr1:151,365,211
INFO	2026-06-08 08:49:54	MarkDuplicates	Tracking 56605 as yet unmatched pairs. 1158 records in RAM.
INFO	2026-06-08 08:49:56	MarkDuplicates	Read    34,000,000 records.  Elapsed time: 00:01:00s.  Time for last 1,000,000:    2s.  Last read position: chr1:153,771,931
INFO	2026-06-08 08:49:56	MarkDuplicates	Tracking 58315 as yet unmatched pairs. 1277 records in RAM.
INFO	2026-06-08 08:49:58	MarkDuplicates	Read    35,000,000 records.  Elapsed time: 00:01:02s.  Time for last 1,000,000:    2s.  Last read position: chr1:154,345,007
INFO	2026-06-08 08:49:58	MarkDuplicates	Tracking 58960 as yet unmatched pairs. 311 records in RAM.
INFO	2026-06-08 08:50:00	MarkDuplicates	Read    36,000,000 records.  Elapsed time: 00:01:04s.  Time for last 1,000,000:    1s.  Last read position: chr1:155,187,464
INFO	2026-06-08 08:50:00	MarkDuplicates	Tracking 64310 as yet unmatched pairs. 3756 records in RAM.
INFO	2026-06-08 08:50:02	MarkDuplicates	Read    37,000,000 records.  Elapsed time: 00:01:05s.  Time for last 1,000,000:    1s.  Last read position: chr1:155,754,374
INFO	2026-06-08 08:50:02	MarkDuplicates	Tracking 62446 as yet unmatched pairs. 311 records in RAM.
INFO	2026-06-08 08:50:03	MarkDuplicates	Read    38,000,000 records.  Elapsed time: 00:01:07s.  Time for last 1,000,000:    1s.  Last read position: chr1:156,137,210
INFO	2026-06-08 08:50:03	MarkDuplicates	Tracking 69423 as yet unmatched pairs. 5265 records in RAM.
INFO	2026-06-08 08:50:05	MarkDuplicates	Read    39,000,000 records.  Elapsed time: 00:01:09s.  Time for last 1,000,000:    1s.  Last read position: chr1:158,094,956
INFO	2026-06-08 08:50:05	MarkDuplicates	Tracking 66284 as yet unmatched pairs. 173 records in RAM.
INFO	2026-06-08 08:50:07	MarkDuplicates	Read    40,000,000 records.  Elapsed time: 00:01:10s.  Time for last 1,000,000:    1s.  Last read position: chr1:161,072,859
INFO	2026-06-08 08:50:07	MarkDuplicates	Tracking 68467 as yet unmatched pairs. 599 records in RAM.
INFO	2026-06-08 08:50:08	MarkDuplicates	Read    41,000,000 records.  Elapsed time: 00:01:12s.  Time for last 1,000,000:    1s.  Last read position: chr1:165,907,755
INFO	2026-06-08 08:50:08	MarkDuplicates	Tracking 69742 as yet unmatched pairs. 210 records in RAM.
INFO	2026-06-08 08:50:10	MarkDuplicates	Read    42,000,000 records.  Elapsed time: 00:01:14s.  Time for last 1,000,000:    1s.  Last read position: chr1:171,579,853
INFO	2026-06-08 08:50:10	MarkDuplicates	Tracking 72012 as yet unmatched pairs. 933 records in RAM.
INFO	2026-06-08 08:50:11	MarkDuplicates	Read    43,000,000 records.  Elapsed time: 00:01:15s.  Time for last 1,000,000:    1s.  Last read position: chr1:180,178,860
INFO	2026-06-08 08:50:11	MarkDuplicates	Tracking 73592 as yet unmatched pairs. 891 records in RAM.
INFO	2026-06-08 08:50:13	MarkDuplicates	Read    44,000,000 records.  Elapsed time: 00:01:17s.  Time for last 1,000,000:    1s.  Last read position: chr1:186,055,450
INFO	2026-06-08 08:50:13	MarkDuplicates	Tracking 74840 as yet unmatched pairs. 393 records in RAM.
INFO	2026-06-08 08:50:15	MarkDuplicates	Read    45,000,000 records.  Elapsed time: 00:01:19s.  Time for last 1,000,000:    1s.  Last read position: chr1:197,199,634
INFO	2026-06-08 08:50:15	MarkDuplicates	Tracking 76021 as yet unmatched pairs. 207 records in RAM.
INFO	2026-06-08 08:50:17	MarkDuplicates	Read    46,000,000 records.  Elapsed time: 00:01:21s.  Time for last 1,000,000:    2s.  Last read position: chr1:202,965,482
INFO	2026-06-08 08:50:17	MarkDuplicates	Tracking 78054 as yet unmatched pairs. 425 records in RAM.
INFO	2026-06-08 08:50:19	MarkDuplicates	Read    47,000,000 records.  Elapsed time: 00:01:23s.  Time for last 1,000,000:    2s.  Last read position: chr1:205,663,499
INFO	2026-06-08 08:50:19	MarkDuplicates	Tracking 79316 as yet unmatched pairs. 87 records in RAM.
INFO	2026-06-08 08:50:21	MarkDuplicates	Read    48,000,000 records.  Elapsed time: 00:01:24s.  Time for last 1,000,000:    1s.  Last read position: chr1:212,387,078
INFO	2026-06-08 08:50:21	MarkDuplicates	Tracking 81073 as yet unmatched pairs. 156 records in RAM.
INFO	2026-06-08 08:50:22	MarkDuplicates	Read    49,000,000 records.  Elapsed time: 00:01:26s.  Time for last 1,000,000:    1s.  Last read position: chr1:224,157,499
INFO	2026-06-08 08:50:22	MarkDuplicates	Tracking 82733 as yet unmatched pairs. 212 records in RAM.
INFO	2026-06-08 08:50:24	MarkDuplicates	Read    50,000,000 records.  Elapsed time: 00:01:28s.  Time for last 1,000,000:    1s.  Last read position: chr1:227,112,747
INFO	2026-06-08 08:50:24	MarkDuplicates	Tracking 84407 as yet unmatched pairs. 249 records in RAM.
INFO	2026-06-08 08:50:25	MarkDuplicates	Read    51,000,000 records.  Elapsed time: 00:01:29s.  Time for last 1,000,000:    1s.  Last read position: chr1:233,295,361
INFO	2026-06-08 08:50:25	MarkDuplicates	Tracking 86584 as yet unmatched pairs. 293 records in RAM.
INFO	2026-06-08 08:50:27	MarkDuplicates	Read    52,000,000 records.  Elapsed time: 00:01:31s.  Time for last 1,000,000:    1s.  Last read position: chr1:243,186,329
INFO	2026-06-08 08:50:27	MarkDuplicates	Tracking 88412 as yet unmatched pairs. 307 records in RAM.
INFO	2026-06-08 08:50:29	MarkDuplicates	Read    53,000,000 records.  Elapsed time: 00:01:32s.  Time for last 1,000,000:    1s.  Last read position: chr1:248,850,324
INFO	2026-06-08 08:50:29	MarkDuplicates	Tracking 90984 as yet unmatched pairs. 1165 records in RAM.
INFO	2026-06-08 08:50:31	MarkDuplicates	Read    54,000,000 records.  Elapsed time: 00:01:35s.  Time for last 1,000,000:    2s.  Last read position: chr2:10,791,887
INFO	2026-06-08 08:50:31	MarkDuplicates	Tracking 92043 as yet unmatched pairs. 90609 records in RAM.
INFO	2026-06-08 08:50:33	MarkDuplicates	Read    55,000,000 records.  Elapsed time: 00:01:36s.  Time for last 1,000,000:    1s.  Last read position: chr2:20,205,356
INFO	2026-06-08 08:50:33	MarkDuplicates	Tracking 96314 as yet unmatched pairs. 94854 records in RAM.
INFO	2026-06-08 08:50:34	MarkDuplicates	Read    56,000,000 records.  Elapsed time: 00:01:38s.  Time for last 1,000,000:    1s.  Last read position: chr2:26,764,360
INFO	2026-06-08 08:50:34	MarkDuplicates	Tracking 95703 as yet unmatched pairs. 94181 records in RAM.
INFO	2026-06-08 08:50:36	MarkDuplicates	Read    57,000,000 records.  Elapsed time: 00:01:40s.  Time for last 1,000,000:    1s.  Last read position: chr2:28,411,979
INFO	2026-06-08 08:50:36	MarkDuplicates	Tracking 98547 as yet unmatched pairs. 97004 records in RAM.
INFO	2026-06-08 08:50:38	MarkDuplicates	Read    58,000,000 records.  Elapsed time: 00:01:42s.  Time for last 1,000,000:    1s.  Last read position: chr2:32,916,258
INFO	2026-06-08 08:50:38	MarkDuplicates	Tracking 138620 as yet unmatched pairs. 95828 records in RAM.
INFO	2026-06-08 08:50:40	MarkDuplicates	Read    59,000,000 records.  Elapsed time: 00:01:43s.  Time for last 1,000,000:    1s.  Last read position: chr2:32,916,264
INFO	2026-06-08 08:50:40	MarkDuplicates	Tracking 696425 as yet unmatched pairs. 83733 records in RAM.
INFO	2026-06-08 08:50:42	MarkDuplicates	Read    60,000,000 records.  Elapsed time: 00:01:46s.  Time for last 1,000,000:    2s.  Last read position: chr2:32,916,406
INFO	2026-06-08 08:50:42	MarkDuplicates	Tracking 826484 as yet unmatched pairs. 81052 records in RAM.
INFO	2026-06-08 08:50:44	MarkDuplicates	Read    61,000,000 records.  Elapsed time: 00:01:48s.  Time for last 1,000,000:    2s.  Last read position: chr2:38,298,169
INFO	2026-06-08 08:50:44	MarkDuplicates	Tracking 878804 as yet unmatched pairs. 79321 records in RAM.
INFO	2026-06-08 08:50:46	MarkDuplicates	Read    62,000,000 records.  Elapsed time: 00:01:49s.  Time for last 1,000,000:    1s.  Last read position: chr2:43,982,386
INFO	2026-06-08 08:50:46	MarkDuplicates	Tracking 877931 as yet unmatched pairs. 78427 records in RAM.
INFO	2026-06-08 08:50:47	MarkDuplicates	Read    63,000,000 records.  Elapsed time: 00:01:51s.  Time for last 1,000,000:    1s.  Last read position: chr2:54,974,741
INFO	2026-06-08 08:50:47	MarkDuplicates	Tracking 877122 as yet unmatched pairs. 77595 records in RAM.
INFO	2026-06-08 08:50:49	MarkDuplicates	Read    64,000,000 records.  Elapsed time: 00:01:53s.  Time for last 1,000,000:    1s.  Last read position: chr2:63,856,379
INFO	2026-06-08 08:50:49	MarkDuplicates	Tracking 874630 as yet unmatched pairs. 75084 records in RAM.
INFO	2026-06-08 08:50:51	MarkDuplicates	Read    65,000,000 records.  Elapsed time: 00:01:55s.  Time for last 1,000,000:    2s.  Last read position: chr2:70,991,837
INFO	2026-06-08 08:50:51	MarkDuplicates	Tracking 872577 as yet unmatched pairs. 72994 records in RAM.
INFO	2026-06-08 08:50:52	MarkDuplicates	Read    66,000,000 records.  Elapsed time: 00:01:56s.  Time for last 1,000,000:    1s.  Last read position: chr2:74,462,735
INFO	2026-06-08 08:50:52	MarkDuplicates	Tracking 870933 as yet unmatched pairs. 71315 records in RAM.
INFO	2026-06-08 08:50:54	MarkDuplicates	Read    67,000,000 records.  Elapsed time: 00:01:58s.  Time for last 1,000,000:    1s.  Last read position: chr2:86,542,252
INFO	2026-06-08 08:50:54	MarkDuplicates	Tracking 868825 as yet unmatched pairs. 69158 records in RAM.
INFO	2026-06-08 08:50:55	MarkDuplicates	Read    68,000,000 records.  Elapsed time: 00:01:59s.  Time for last 1,000,000:    1s.  Last read position: chr2:96,290,728
INFO	2026-06-08 08:50:55	MarkDuplicates	Tracking 867775 as yet unmatched pairs. 68088 records in RAM.
INFO	2026-06-08 08:50:57	MarkDuplicates	Read    69,000,000 records.  Elapsed time: 00:02:01s.  Time for last 1,000,000:    1s.  Last read position: chr2:101,004,164
INFO	2026-06-08 08:50:57	MarkDuplicates	Tracking 874122 as yet unmatched pairs. 74385 records in RAM.
INFO	2026-06-08 08:50:59	MarkDuplicates	Read    70,000,000 records.  Elapsed time: 00:02:02s.  Time for last 1,000,000:    1s.  Last read position: chr2:108,764,043
INFO	2026-06-08 08:50:59	MarkDuplicates	Tracking 866497 as yet unmatched pairs. 66736 records in RAM.
INFO	2026-06-08 08:51:00	MarkDuplicates	Read    71,000,000 records.  Elapsed time: 00:02:04s.  Time for last 1,000,000:    1s.  Last read position: chr2:110,543,544
INFO	2026-06-08 08:51:00	MarkDuplicates	Tracking 864432 as yet unmatched pairs. 64662 records in RAM.
INFO	2026-06-08 08:51:01	MarkDuplicates	Read    72,000,000 records.  Elapsed time: 00:02:05s.  Time for last 1,000,000:    1s.  Last read position: chr2:113,955,654
INFO	2026-06-08 08:51:01	MarkDuplicates	Tracking 862899 as yet unmatched pairs. 63109 records in RAM.
INFO	2026-06-08 08:51:03	MarkDuplicates	Read    73,000,000 records.  Elapsed time: 00:02:07s.  Time for last 1,000,000:    1s.  Last read position: chr2:130,646,175
INFO	2026-06-08 08:51:03	MarkDuplicates	Tracking 860650 as yet unmatched pairs. 60827 records in RAM.
INFO	2026-06-08 08:51:05	MarkDuplicates	Read    74,000,000 records.  Elapsed time: 00:02:09s.  Time for last 1,000,000:    1s.  Last read position: chr2:151,440,045
INFO	2026-06-08 08:51:05	MarkDuplicates	Tracking 859615 as yet unmatched pairs. 59754 records in RAM.
INFO	2026-06-08 08:51:06	MarkDuplicates	Read    75,000,000 records.  Elapsed time: 00:02:10s.  Time for last 1,000,000:    1s.  Last read position: chr2:164,727,947
INFO	2026-06-08 08:51:06	MarkDuplicates	Tracking 857868 as yet unmatched pairs. 57968 records in RAM.
INFO	2026-06-08 08:51:08	MarkDuplicates	Read    76,000,000 records.  Elapsed time: 00:02:12s.  Time for last 1,000,000:    1s.  Last read position: chr2:174,572,013
INFO	2026-06-08 08:51:08	MarkDuplicates	Tracking 856347 as yet unmatched pairs. 56421 records in RAM.
INFO	2026-06-08 08:51:10	MarkDuplicates	Read    77,000,000 records.  Elapsed time: 00:02:14s.  Time for last 1,000,000:    1s.  Last read position: chr2:186,495,241
INFO	2026-06-08 08:51:10	MarkDuplicates	Tracking 854923 as yet unmatched pairs. 54971 records in RAM.
INFO	2026-06-08 08:51:12	MarkDuplicates	Read    78,000,000 records.  Elapsed time: 00:02:15s.  Time for last 1,000,000:    1s.  Last read position: chr2:188,993,366
INFO	2026-06-08 08:51:12	MarkDuplicates	Tracking 862810 as yet unmatched pairs. 62824 records in RAM.
INFO	2026-06-08 08:51:13	MarkDuplicates	Read    79,000,000 records.  Elapsed time: 00:02:17s.  Time for last 1,000,000:    1s.  Last read position: chr2:189,001,440
INFO	2026-06-08 08:51:13	MarkDuplicates	Tracking 860448 as yet unmatched pairs. 60429 records in RAM.
INFO	2026-06-08 08:51:16	MarkDuplicates	Read    80,000,000 records.  Elapsed time: 00:02:19s.  Time for last 1,000,000:    2s.  Last read position: chr2:189,009,156
INFO	2026-06-08 08:51:16	MarkDuplicates	Tracking 857146 as yet unmatched pairs. 57088 records in RAM.
INFO	2026-06-08 08:51:18	MarkDuplicates	Read    81,000,000 records.  Elapsed time: 00:02:22s.  Time for last 1,000,000:    2s.  Last read position: chr2:189,066,395
INFO	2026-06-08 08:51:18	MarkDuplicates	Tracking 850592 as yet unmatched pairs. 50519 records in RAM.
INFO	2026-06-08 08:51:20	MarkDuplicates	Read    82,000,000 records.  Elapsed time: 00:02:23s.  Time for last 1,000,000:    1s.  Last read position: chr2:190,998,281
INFO	2026-06-08 08:51:20	MarkDuplicates	Tracking 846186 as yet unmatched pairs. 46095 records in RAM.
INFO	2026-06-08 08:51:21	MarkDuplicates	Read    83,000,000 records.  Elapsed time: 00:02:25s.  Time for last 1,000,000:    1s.  Last read position: chr2:201,761,651
INFO	2026-06-08 08:51:21	MarkDuplicates	Tracking 844043 as yet unmatched pairs. 43927 records in RAM.
INFO	2026-06-08 08:51:23	MarkDuplicates	Read    84,000,000 records.  Elapsed time: 00:02:27s.  Time for last 1,000,000:    2s.  Last read position: chr2:211,387,087
INFO	2026-06-08 08:51:23	MarkDuplicates	Tracking 842776 as yet unmatched pairs. 42607 records in RAM.
INFO	2026-06-08 08:51:25	MarkDuplicates	Read    85,000,000 records.  Elapsed time: 00:02:29s.  Time for last 1,000,000:    1s.  Last read position: chr2:215,361,995
INFO	2026-06-08 08:51:25	MarkDuplicates	Tracking 889596 as yet unmatched pairs. 89410 records in RAM.
INFO	2026-06-08 08:51:26	MarkDuplicates	Read    86,000,000 records.  Elapsed time: 00:02:30s.  Time for last 1,000,000:    1s.  Last read position: chr2:215,367,946
INFO	2026-06-08 08:51:26	MarkDuplicates	Tracking 879632 as yet unmatched pairs. 79437 records in RAM.
INFO	2026-06-08 08:51:29	MarkDuplicates	Read    87,000,000 records.  Elapsed time: 00:02:32s.  Time for last 1,000,000:    2s.  Last read position: chr2:215,371,996
INFO	2026-06-08 08:51:29	MarkDuplicates	Tracking 897674 as yet unmatched pairs. 97452 records in RAM.
INFO	2026-06-08 08:51:30	MarkDuplicates	Read    88,000,000 records.  Elapsed time: 00:02:34s.  Time for last 1,000,000:    1s.  Last read position: chr2:215,372,295
INFO	2026-06-08 08:51:30	MarkDuplicates	Tracking 888240 as yet unmatched pairs. 88017 records in RAM.
INFO	2026-06-08 08:51:32	MarkDuplicates	Read    89,000,000 records.  Elapsed time: 00:02:36s.  Time for last 1,000,000:    1s.  Last read position: chr2:215,375,364
INFO	2026-06-08 08:51:32	MarkDuplicates	Tracking 879657 as yet unmatched pairs. 79427 records in RAM.
INFO	2026-06-08 08:51:34	MarkDuplicates	Read    90,000,000 records.  Elapsed time: 00:02:38s.  Time for last 1,000,000:    2s.  Last read position: chr2:215,378,175
INFO	2026-06-08 08:51:34	MarkDuplicates	Tracking 878833 as yet unmatched pairs. 78596 records in RAM.
INFO	2026-06-08 08:51:36	MarkDuplicates	Read    91,000,000 records.  Elapsed time: 00:02:40s.  Time for last 1,000,000:    1s.  Last read position: chr2:215,380,939
INFO	2026-06-08 08:51:36	MarkDuplicates	Tracking 898741 as yet unmatched pairs. 98502 records in RAM.
INFO	2026-06-08 08:51:38	MarkDuplicates	Read    92,000,000 records.  Elapsed time: 00:02:42s.  Time for last 1,000,000:    2s.  Last read position: chr2:215,384,070
INFO	2026-06-08 08:51:38	MarkDuplicates	Tracking 864068 as yet unmatched pairs. 63822 records in RAM.
INFO	2026-06-08 08:51:40	MarkDuplicates	Read    93,000,000 records.  Elapsed time: 00:02:44s.  Time for last 1,000,000:    2s.  Last read position: chr2:215,386,946
INFO	2026-06-08 08:51:40	MarkDuplicates	Tracking 893703 as yet unmatched pairs. 93443 records in RAM.
INFO	2026-06-08 08:51:42	MarkDuplicates	Read    94,000,000 records.  Elapsed time: 00:02:46s.  Time for last 1,000,000:    1s.  Last read position: chr2:215,394,680
INFO	2026-06-08 08:51:42	MarkDuplicates	Tracking 861825 as yet unmatched pairs. 61550 records in RAM.
INFO	2026-06-08 08:51:44	MarkDuplicates	Read    95,000,000 records.  Elapsed time: 00:02:48s.  Time for last 1,000,000:    1s.  Last read position: chr2:215,399,328
INFO	2026-06-08 08:51:44	MarkDuplicates	Tracking 857194 as yet unmatched pairs. 56912 records in RAM.
INFO	2026-06-08 08:51:46	MarkDuplicates	Read    96,000,000 records.  Elapsed time: 00:02:50s.  Time for last 1,000,000:    1s.  Last read position: chr2:215,406,417
INFO	2026-06-08 08:51:46	MarkDuplicates	Tracking 864114 as yet unmatched pairs. 63807 records in RAM.
INFO	2026-06-08 08:51:48	MarkDuplicates	Read    97,000,000 records.  Elapsed time: 00:02:52s.  Time for last 1,000,000:    1s.  Last read position: chr2:215,408,319
INFO	2026-06-08 08:51:48	MarkDuplicates	Tracking 880941 as yet unmatched pairs. 80616 records in RAM.
INFO	2026-06-08 08:51:50	MarkDuplicates	Read    98,000,000 records.  Elapsed time: 00:02:54s.  Time for last 1,000,000:    1s.  Last read position: chr2:215,410,072
INFO	2026-06-08 08:51:50	MarkDuplicates	Tracking 865840 as yet unmatched pairs. 65505 records in RAM.
INFO	2026-06-08 08:51:52	MarkDuplicates	Read    99,000,000 records.  Elapsed time: 00:02:55s.  Time for last 1,000,000:    1s.  Last read position: chr2:215,422,103
INFO	2026-06-08 08:51:52	MarkDuplicates	Tracking 840583 as yet unmatched pairs. 40246 records in RAM.
INFO	2026-06-08 08:51:53	MarkDuplicates	Read   100,000,000 records.  Elapsed time: 00:02:57s.  Time for last 1,000,000:    1s.  Last read position: chr2:215,425,125
INFO	2026-06-08 08:51:53	MarkDuplicates	Tracking 856984 as yet unmatched pairs. 56641 records in RAM.
INFO	2026-06-08 08:51:55	MarkDuplicates	Read   101,000,000 records.  Elapsed time: 00:02:59s.  Time for last 1,000,000:    1s.  Last read position: chr2:215,431,854
INFO	2026-06-08 08:51:55	MarkDuplicates	Tracking 853026 as yet unmatched pairs. 52674 records in RAM.
INFO	2026-06-08 08:51:57	MarkDuplicates	Read   102,000,000 records.  Elapsed time: 00:03:01s.  Time for last 1,000,000:    1s.  Last read position: chr2:215,435,729
INFO	2026-06-08 08:51:57	MarkDuplicates	Tracking 839403 as yet unmatched pairs. 39033 records in RAM.
INFO	2026-06-08 08:51:58	MarkDuplicates	Read   103,000,000 records.  Elapsed time: 00:03:02s.  Time for last 1,000,000:    1s.  Last read position: chr2:218,400,117
INFO	2026-06-08 08:51:58	MarkDuplicates	Tracking 814533 as yet unmatched pairs. 14115 records in RAM.
INFO	2026-06-08 08:52:00	MarkDuplicates	Read   104,000,000 records.  Elapsed time: 00:03:04s.  Time for last 1,000,000:    1s.  Last read position: chr2:221,425,963
INFO	2026-06-08 08:52:00	MarkDuplicates	Tracking 811292 as yet unmatched pairs. 10863 records in RAM.
INFO	2026-06-08 08:52:02	MarkDuplicates	Read   105,000,000 records.  Elapsed time: 00:03:06s.  Time for last 1,000,000:    1s.  Last read position: chr2:231,463,255
INFO	2026-06-08 08:52:02	MarkDuplicates	Tracking 811797 as yet unmatched pairs. 11345 records in RAM.
INFO	2026-06-08 08:52:04	MarkDuplicates	Read   106,000,000 records.  Elapsed time: 00:03:07s.  Time for last 1,000,000:    1s.  Last read position: chr2:237,336,308
INFO	2026-06-08 08:52:04	MarkDuplicates	Tracking 812180 as yet unmatched pairs. 11705 records in RAM.
INFO	2026-06-08 08:52:05	MarkDuplicates	Read   107,000,000 records.  Elapsed time: 00:03:09s.  Time for last 1,000,000:    1s.  Last read position: chr2:237,363,263
INFO	2026-06-08 08:52:05	MarkDuplicates	Tracking 810510 as yet unmatched pairs. 10023 records in RAM.
INFO	2026-06-08 08:52:07	MarkDuplicates	Read   108,000,000 records.  Elapsed time: 00:03:11s.  Time for last 1,000,000:    1s.  Last read position: chr2:237,376,911
INFO	2026-06-08 08:52:07	MarkDuplicates	Tracking 809867 as yet unmatched pairs. 9349 records in RAM.
INFO	2026-06-08 08:52:09	MarkDuplicates	Read   109,000,000 records.  Elapsed time: 00:03:13s.  Time for last 1,000,000:    1s.  Last read position: chr2:238,848,076
INFO	2026-06-08 08:52:09	MarkDuplicates	Tracking 802774 as yet unmatched pairs. 2243 records in RAM.
INFO	2026-06-08 08:52:10	MarkDuplicates	Read   110,000,000 records.  Elapsed time: 00:03:14s.  Time for last 1,000,000:    1s.  Last read position: chr2:241,668,145
INFO	2026-06-08 08:52:10	MarkDuplicates	Tracking 801234 as yet unmatched pairs. 683 records in RAM.
INFO	2026-06-08 08:52:12	MarkDuplicates	Read   111,000,000 records.  Elapsed time: 00:03:16s.  Time for last 1,000,000:    1s.  Last read position: chr3:9,918,507
INFO	2026-06-08 08:52:12	MarkDuplicates	Tracking 799920 as yet unmatched pairs. 42511 records in RAM.
INFO	2026-06-08 08:52:14	MarkDuplicates	Read   112,000,000 records.  Elapsed time: 00:03:18s.  Time for last 1,000,000:    1s.  Last read position: chr3:13,621,827
INFO	2026-06-08 08:52:14	MarkDuplicates	Tracking 798778 as yet unmatched pairs. 41340 records in RAM.
INFO	2026-06-08 08:52:16	MarkDuplicates	Read   113,000,000 records.  Elapsed time: 00:03:19s.  Time for last 1,000,000:    1s.  Last read position: chr3:27,376,791
INFO	2026-06-08 08:52:16	MarkDuplicates	Tracking 796004 as yet unmatched pairs. 38504 records in RAM.
INFO	2026-06-08 08:52:17	MarkDuplicates	Read   114,000,000 records.  Elapsed time: 00:03:21s.  Time for last 1,000,000:    1s.  Last read position: chr3:38,003,257
INFO	2026-06-08 08:52:17	MarkDuplicates	Tracking 794085 as yet unmatched pairs. 36542 records in RAM.
INFO	2026-06-08 08:52:19	MarkDuplicates	Read   115,000,000 records.  Elapsed time: 00:03:23s.  Time for last 1,000,000:    1s.  Last read position: chr3:42,634,663
INFO	2026-06-08 08:52:19	MarkDuplicates	Tracking 792884 as yet unmatched pairs. 35311 records in RAM.
INFO	2026-06-08 08:52:21	MarkDuplicates	Read   116,000,000 records.  Elapsed time: 00:03:25s.  Time for last 1,000,000:    2s.  Last read position: chr3:47,007,111
INFO	2026-06-08 08:52:21	MarkDuplicates	Tracking 791075 as yet unmatched pairs. 33475 records in RAM.
INFO	2026-06-08 08:52:23	MarkDuplicates	Read   117,000,000 records.  Elapsed time: 00:03:27s.  Time for last 1,000,000:    1s.  Last read position: chr3:48,419,729
INFO	2026-06-08 08:52:23	MarkDuplicates	Tracking 789749 as yet unmatched pairs. 32134 records in RAM.
INFO	2026-06-08 08:52:25	MarkDuplicates	Read   118,000,000 records.  Elapsed time: 00:03:29s.  Time for last 1,000,000:    1s.  Last read position: chr3:49,028,318
INFO	2026-06-08 08:52:25	MarkDuplicates	Tracking 787891 as yet unmatched pairs. 30251 records in RAM.
INFO	2026-06-08 08:52:27	MarkDuplicates	Read   119,000,000 records.  Elapsed time: 00:03:31s.  Time for last 1,000,000:    2s.  Last read position: chr3:49,681,154
INFO	2026-06-08 08:52:27	MarkDuplicates	Tracking 785448 as yet unmatched pairs. 27788 records in RAM.
INFO	2026-06-08 08:52:30	MarkDuplicates	Read   120,000,000 records.  Elapsed time: 00:03:33s.  Time for last 1,000,000:    2s.  Last read position: chr3:51,958,147
INFO	2026-06-08 08:52:30	MarkDuplicates	Tracking 783114 as yet unmatched pairs. 25438 records in RAM.
INFO	2026-06-08 08:52:31	MarkDuplicates	Read   121,000,000 records.  Elapsed time: 00:03:35s.  Time for last 1,000,000:    1s.  Last read position: chr3:52,697,862
INFO	2026-06-08 08:52:31	MarkDuplicates	Tracking 781237 as yet unmatched pairs. 23535 records in RAM.
INFO	2026-06-08 08:52:33	MarkDuplicates	Read   122,000,000 records.  Elapsed time: 00:03:37s.  Time for last 1,000,000:    1s.  Last read position: chr3:58,136,140
INFO	2026-06-08 08:52:33	MarkDuplicates	Tracking 780427 as yet unmatched pairs. 22707 records in RAM.
INFO	2026-06-08 08:52:35	MarkDuplicates	Read   123,000,000 records.  Elapsed time: 00:03:39s.  Time for last 1,000,000:    1s.  Last read position: chr3:71,041,383
INFO	2026-06-08 08:52:35	MarkDuplicates	Tracking 778261 as yet unmatched pairs. 20500 records in RAM.
INFO	2026-06-08 08:52:36	MarkDuplicates	Read   124,000,000 records.  Elapsed time: 00:03:40s.  Time for last 1,000,000:    1s.  Last read position: chr3:100,736,581
INFO	2026-06-08 08:52:36	MarkDuplicates	Tracking 776991 as yet unmatched pairs. 19169 records in RAM.
INFO	2026-06-08 08:52:38	MarkDuplicates	Read   125,000,000 records.  Elapsed time: 00:03:42s.  Time for last 1,000,000:    1s.  Last read position: chr3:112,638,817
INFO	2026-06-08 08:52:38	MarkDuplicates	Tracking 778809 as yet unmatched pairs. 20955 records in RAM.
INFO	2026-06-08 08:52:40	MarkDuplicates	Read   126,000,000 records.  Elapsed time: 00:03:43s.  Time for last 1,000,000:    1s.  Last read position: chr3:120,415,950
INFO	2026-06-08 08:52:40	MarkDuplicates	Tracking 774686 as yet unmatched pairs. 16812 records in RAM.
INFO	2026-06-08 08:52:41	MarkDuplicates	Read   127,000,000 records.  Elapsed time: 00:03:45s.  Time for last 1,000,000:    1s.  Last read position: chr3:124,796,393
INFO	2026-06-08 08:52:41	MarkDuplicates	Tracking 773408 as yet unmatched pairs. 15514 records in RAM.
INFO	2026-06-08 08:52:43	MarkDuplicates	Read   128,000,000 records.  Elapsed time: 00:03:47s.  Time for last 1,000,000:    1s.  Last read position: chr3:129,171,641
INFO	2026-06-08 08:52:43	MarkDuplicates	Tracking 771870 as yet unmatched pairs. 13966 records in RAM.
INFO	2026-06-08 08:52:45	MarkDuplicates	Read   129,000,000 records.  Elapsed time: 00:03:49s.  Time for last 1,000,000:    1s.  Last read position: chr3:134,370,814
INFO	2026-06-08 08:52:45	MarkDuplicates	Tracking 768854 as yet unmatched pairs. 10934 records in RAM.
INFO	2026-06-08 08:52:47	MarkDuplicates	Read   130,000,000 records.  Elapsed time: 00:03:50s.  Time for last 1,000,000:    1s.  Last read position: chr3:149,162,714
INFO	2026-06-08 08:52:47	MarkDuplicates	Tracking 766374 as yet unmatched pairs. 8431 records in RAM.
INFO	2026-06-08 08:52:48	MarkDuplicates	Read   131,000,000 records.  Elapsed time: 00:03:52s.  Time for last 1,000,000:    1s.  Last read position: chr3:160,531,543
INFO	2026-06-08 08:52:48	MarkDuplicates	Tracking 765337 as yet unmatched pairs. 7329 records in RAM.
INFO	2026-06-08 08:52:49	MarkDuplicates	Read   132,000,000 records.  Elapsed time: 00:03:53s.  Time for last 1,000,000:    1s.  Last read position: chr3:182,837,121
INFO	2026-06-08 08:52:49	MarkDuplicates	Tracking 763382 as yet unmatched pairs. 5335 records in RAM.
INFO	2026-06-08 08:52:51	MarkDuplicates	Read   133,000,000 records.  Elapsed time: 00:03:55s.  Time for last 1,000,000:    1s.  Last read position: chr3:184,710,944
INFO	2026-06-08 08:52:51	MarkDuplicates	Tracking 761527 as yet unmatched pairs. 3468 records in RAM.
INFO	2026-06-08 08:52:53	MarkDuplicates	Read   134,000,000 records.  Elapsed time: 00:03:57s.  Time for last 1,000,000:    2s.  Last read position: chr3:194,359,577
INFO	2026-06-08 08:52:53	MarkDuplicates	Tracking 762573 as yet unmatched pairs. 4497 records in RAM.
INFO	2026-06-08 08:52:55	MarkDuplicates	Read   135,000,000 records.  Elapsed time: 00:03:59s.  Time for last 1,000,000:    1s.  Last read position: chr3:197,835,684
INFO	2026-06-08 08:52:55	MarkDuplicates	Tracking 758537 as yet unmatched pairs. 425 records in RAM.
INFO	2026-06-08 08:52:57	MarkDuplicates	Read   136,000,000 records.  Elapsed time: 00:04:00s.  Time for last 1,000,000:    1s.  Last read position: chr4:1,900,998
INFO	2026-06-08 08:52:57	MarkDuplicates	Tracking 756406 as yet unmatched pairs. 22524 records in RAM.
INFO	2026-06-08 08:52:58	MarkDuplicates	Read   137,000,000 records.  Elapsed time: 00:04:02s.  Time for last 1,000,000:    1s.  Last read position: chr4:6,641,003
INFO	2026-06-08 08:52:58	MarkDuplicates	Tracking 754507 as yet unmatched pairs. 20588 records in RAM.
INFO	2026-06-08 08:53:00	MarkDuplicates	Read   138,000,000 records.  Elapsed time: 00:04:04s.  Time for last 1,000,000:    2s.  Last read position: chr4:15,644,538
INFO	2026-06-08 08:53:00	MarkDuplicates	Tracking 752944 as yet unmatched pairs. 19004 records in RAM.
INFO	2026-06-08 08:53:02	MarkDuplicates	Read   139,000,000 records.  Elapsed time: 00:04:06s.  Time for last 1,000,000:    1s.  Last read position: chr4:39,303,064
INFO	2026-06-08 08:53:02	MarkDuplicates	Tracking 750833 as yet unmatched pairs. 16871 records in RAM.
INFO	2026-06-08 08:53:04	MarkDuplicates	Read   140,000,000 records.  Elapsed time: 00:04:08s.  Time for last 1,000,000:    1s.  Last read position: chr4:53,476,864
INFO	2026-06-08 08:53:04	MarkDuplicates	Tracking 749014 as yet unmatched pairs. 14996 records in RAM.
INFO	2026-06-08 08:53:06	MarkDuplicates	Read   141,000,000 records.  Elapsed time: 00:04:10s.  Time for last 1,000,000:    2s.  Last read position: chr4:70,762,530
INFO	2026-06-08 08:53:06	MarkDuplicates	Tracking 748106 as yet unmatched pairs. 14063 records in RAM.
INFO	2026-06-08 08:53:08	MarkDuplicates	Read   142,000,000 records.  Elapsed time: 00:04:12s.  Time for last 1,000,000:    1s.  Last read position: chr4:77,610,652
INFO	2026-06-08 08:53:08	MarkDuplicates	Tracking 747256 as yet unmatched pairs. 13191 records in RAM.
INFO	2026-06-08 08:53:10	MarkDuplicates	Read   143,000,000 records.  Elapsed time: 00:04:14s.  Time for last 1,000,000:    2s.  Last read position: chr4:87,490,758
INFO	2026-06-08 08:53:10	MarkDuplicates	Tracking 746689 as yet unmatched pairs. 12593 records in RAM.
INFO	2026-06-08 08:53:12	MarkDuplicates	Read   144,000,000 records.  Elapsed time: 00:04:16s.  Time for last 1,000,000:    1s.  Last read position: chr4:105,236,217
INFO	2026-06-08 08:53:12	MarkDuplicates	Tracking 743304 as yet unmatched pairs. 9179 records in RAM.
INFO	2026-06-08 08:53:13	MarkDuplicates	Read   145,000,000 records.  Elapsed time: 00:04:17s.  Time for last 1,000,000:    1s.  Last read position: chr4:120,201,725
INFO	2026-06-08 08:53:13	MarkDuplicates	Tracking 741369 as yet unmatched pairs. 7204 records in RAM.
INFO	2026-06-08 08:53:15	MarkDuplicates	Read   146,000,000 records.  Elapsed time: 00:04:19s.  Time for last 1,000,000:    1s.  Last read position: chr4:140,622,298
INFO	2026-06-08 08:53:15	MarkDuplicates	Tracking 740403 as yet unmatched pairs. 6217 records in RAM.
INFO	2026-06-08 08:53:17	MarkDuplicates	Read   147,000,000 records.  Elapsed time: 00:04:21s.  Time for last 1,000,000:    1s.  Last read position: chr4:151,133,034
INFO	2026-06-08 08:53:17	MarkDuplicates	Tracking 738568 as yet unmatched pairs. 4343 records in RAM.
INFO	2026-06-08 08:53:18	MarkDuplicates	Read   148,000,000 records.  Elapsed time: 00:04:22s.  Time for last 1,000,000:    1s.  Last read position: chr4:165,341,749
INFO	2026-06-08 08:53:18	MarkDuplicates	Tracking 736756 as yet unmatched pairs. 2510 records in RAM.
INFO	2026-06-08 08:53:20	MarkDuplicates	Read   149,000,000 records.  Elapsed time: 00:04:24s.  Time for last 1,000,000:    1s.  Last read position: chr4:185,367,095
INFO	2026-06-08 08:53:20	MarkDuplicates	Tracking 735032 as yet unmatched pairs. 760 records in RAM.
INFO	2026-06-08 08:53:22	MarkDuplicates	Read   150,000,000 records.  Elapsed time: 00:04:26s.  Time for last 1,000,000:    1s.  Last read position: chr5:2,748,947
INFO	2026-06-08 08:53:22	MarkDuplicates	Tracking 733906 as yet unmatched pairs. 41945 records in RAM.
INFO	2026-06-08 08:53:24	MarkDuplicates	Read   151,000,000 records.  Elapsed time: 00:04:28s.  Time for last 1,000,000:    2s.  Last read position: chr5:14,366,895
INFO	2026-06-08 08:53:24	MarkDuplicates	Tracking 732871 as yet unmatched pairs. 40886 records in RAM.
INFO	2026-06-08 08:53:26	MarkDuplicates	Read   152,000,000 records.  Elapsed time: 00:04:30s.  Time for last 1,000,000:    1s.  Last read position: chr5:16,681,929
INFO	2026-06-08 08:53:26	MarkDuplicates	Tracking 729746 as yet unmatched pairs. 37741 records in RAM.
INFO	2026-06-08 08:53:27	MarkDuplicates	Read   153,000,000 records.  Elapsed time: 00:04:31s.  Time for last 1,000,000:    1s.  Last read position: chr5:37,165,645
INFO	2026-06-08 08:53:27	MarkDuplicates	Tracking 728186 as yet unmatched pairs. 36138 records in RAM.
INFO	2026-06-08 08:53:29	MarkDuplicates	Read   154,000,000 records.  Elapsed time: 00:04:33s.  Time for last 1,000,000:    1s.  Last read position: chr5:55,256,504
INFO	2026-06-08 08:53:29	MarkDuplicates	Tracking 726745 as yet unmatched pairs. 34678 records in RAM.
INFO	2026-06-08 08:53:32	MarkDuplicates	Read   155,000,000 records.  Elapsed time: 00:04:35s.  Time for last 1,000,000:    2s.  Last read position: chr5:67,160,395
INFO	2026-06-08 08:53:32	MarkDuplicates	Tracking 725078 as yet unmatched pairs. 32975 records in RAM.
INFO	2026-06-08 08:53:33	MarkDuplicates	Read   156,000,000 records.  Elapsed time: 00:04:37s.  Time for last 1,000,000:    1s.  Last read position: chr5:72,194,980
INFO	2026-06-08 08:53:33	MarkDuplicates	Tracking 724194 as yet unmatched pairs. 32062 records in RAM.
INFO	2026-06-08 08:53:35	MarkDuplicates	Read   157,000,000 records.  Elapsed time: 00:04:39s.  Time for last 1,000,000:    1s.  Last read position: chr5:80,040,076
INFO	2026-06-08 08:53:35	MarkDuplicates	Tracking 722709 as yet unmatched pairs. 30554 records in RAM.
INFO	2026-06-08 08:53:37	MarkDuplicates	Read   158,000,000 records.  Elapsed time: 00:04:41s.  Time for last 1,000,000:    2s.  Last read position: chr5:83,538,722
INFO	2026-06-08 08:53:37	MarkDuplicates	Tracking 722937 as yet unmatched pairs. 30770 records in RAM.
INFO	2026-06-08 08:53:39	MarkDuplicates	Read   159,000,000 records.  Elapsed time: 00:04:43s.  Time for last 1,000,000:    2s.  Last read position: chr5:95,484,794
INFO	2026-06-08 08:53:39	MarkDuplicates	Tracking 719995 as yet unmatched pairs. 27794 records in RAM.
INFO	2026-06-08 08:53:41	MarkDuplicates	Read   160,000,000 records.  Elapsed time: 00:04:45s.  Time for last 1,000,000:    1s.  Last read position: chr5:113,053,922
INFO	2026-06-08 08:53:41	MarkDuplicates	Tracking 718027 as yet unmatched pairs. 25799 records in RAM.
INFO	2026-06-08 08:53:42	MarkDuplicates	Read   161,000,000 records.  Elapsed time: 00:04:46s.  Time for last 1,000,000:    1s.  Last read position: chr5:132,207,812
INFO	2026-06-08 08:53:42	MarkDuplicates	Tracking 716573 as yet unmatched pairs. 24322 records in RAM.
INFO	2026-06-08 08:53:44	MarkDuplicates	Read   162,000,000 records.  Elapsed time: 00:04:48s.  Time for last 1,000,000:    1s.  Last read position: chr5:136,134,041
INFO	2026-06-08 08:53:44	MarkDuplicates	Tracking 714518 as yet unmatched pairs. 22238 records in RAM.
INFO	2026-06-08 08:53:46	MarkDuplicates	Read   163,000,000 records.  Elapsed time: 00:04:50s.  Time for last 1,000,000:    1s.  Last read position: chr5:140,458,825
INFO	2026-06-08 08:53:46	MarkDuplicates	Tracking 713218 as yet unmatched pairs. 20906 records in RAM.
INFO	2026-06-08 08:53:47	MarkDuplicates	Read   164,000,000 records.  Elapsed time: 00:04:51s.  Time for last 1,000,000:    1s.  Last read position: chr5:141,432,615
INFO	2026-06-08 08:53:47	MarkDuplicates	Tracking 712007 as yet unmatched pairs. 19688 records in RAM.
INFO	2026-06-08 08:53:49	MarkDuplicates	Read   165,000,000 records.  Elapsed time: 00:04:53s.  Time for last 1,000,000:    1s.  Last read position: chr5:148,439,759
INFO	2026-06-08 08:53:49	MarkDuplicates	Tracking 709743 as yet unmatched pairs. 17409 records in RAM.
INFO	2026-06-08 08:53:51	MarkDuplicates	Read   166,000,000 records.  Elapsed time: 00:04:55s.  Time for last 1,000,000:    1s.  Last read position: chr5:150,131,979
INFO	2026-06-08 08:53:51	MarkDuplicates	Tracking 714621 as yet unmatched pairs. 22258 records in RAM.
INFO	2026-06-08 08:53:53	MarkDuplicates	Read   167,000,000 records.  Elapsed time: 00:04:56s.  Time for last 1,000,000:    1s.  Last read position: chr5:150,403,121
INFO	2026-06-08 08:53:53	MarkDuplicates	Tracking 732015 as yet unmatched pairs. 39633 records in RAM.
INFO	2026-06-08 08:53:54	MarkDuplicates	Read   168,000,000 records.  Elapsed time: 00:04:58s.  Time for last 1,000,000:    1s.  Last read position: chr5:150,406,950
INFO	2026-06-08 08:53:54	MarkDuplicates	Tracking 727324 as yet unmatched pairs. 34921 records in RAM.
INFO	2026-06-08 08:53:56	MarkDuplicates	Read   169,000,000 records.  Elapsed time: 00:05:00s.  Time for last 1,000,000:    1s.  Last read position: chr5:151,136,324
INFO	2026-06-08 08:53:56	MarkDuplicates	Tracking 704417 as yet unmatched pairs. 11974 records in RAM.
INFO	2026-06-08 08:53:58	MarkDuplicates	Read   170,000,000 records.  Elapsed time: 00:05:01s.  Time for last 1,000,000:    1s.  Last read position: chr5:156,451,771
INFO	2026-06-08 08:53:58	MarkDuplicates	Tracking 701050 as yet unmatched pairs. 8593 records in RAM.
INFO	2026-06-08 08:53:59	MarkDuplicates	Read   171,000,000 records.  Elapsed time: 00:05:03s.  Time for last 1,000,000:    1s.  Last read position: chr5:171,392,717
INFO	2026-06-08 08:53:59	MarkDuplicates	Tracking 706957 as yet unmatched pairs. 14482 records in RAM.
INFO	2026-06-08 08:54:01	MarkDuplicates	Read   172,000,000 records.  Elapsed time: 00:05:05s.  Time for last 1,000,000:    1s.  Last read position: chr5:176,651,829
INFO	2026-06-08 08:54:01	MarkDuplicates	Tracking 698070 as yet unmatched pairs. 5579 records in RAM.
INFO	2026-06-08 08:54:03	MarkDuplicates	Read   173,000,000 records.  Elapsed time: 00:05:06s.  Time for last 1,000,000:    1s.  Last read position: chr5:179,112,001
INFO	2026-06-08 08:54:03	MarkDuplicates	Tracking 695925 as yet unmatched pairs. 3424 records in RAM.
INFO	2026-06-08 08:54:04	MarkDuplicates	Read   174,000,000 records.  Elapsed time: 00:05:08s.  Time for last 1,000,000:    1s.  Last read position: chr5:179,825,176
INFO	2026-06-08 08:54:04	MarkDuplicates	Tracking 698932 as yet unmatched pairs. 6424 records in RAM.
INFO	2026-06-08 08:54:07	MarkDuplicates	Read   175,000,000 records.  Elapsed time: 00:05:11s.  Time for last 1,000,000:    2s.  Last read position: chr6:637,760
INFO	2026-06-08 08:54:07	MarkDuplicates	Tracking 692521 as yet unmatched pairs. 43897 records in RAM.
INFO	2026-06-08 08:54:09	MarkDuplicates	Read   176,000,000 records.  Elapsed time: 00:05:13s.  Time for last 1,000,000:    2s.  Last read position: chr6:7,574,741
INFO	2026-06-08 08:54:09	MarkDuplicates	Tracking 690828 as yet unmatched pairs. 42181 records in RAM.
INFO	2026-06-08 08:54:12	MarkDuplicates	Read   177,000,000 records.  Elapsed time: 00:05:15s.  Time for last 1,000,000:    2s.  Last read position: chr6:17,836,933
INFO	2026-06-08 08:54:12	MarkDuplicates	Tracking 689315 as yet unmatched pairs. 40643 records in RAM.
INFO	2026-06-08 08:54:13	MarkDuplicates	Read   178,000,000 records.  Elapsed time: 00:05:17s.  Time for last 1,000,000:    1s.  Last read position: chr6:27,831,453
INFO	2026-06-08 08:54:13	MarkDuplicates	Tracking 687438 as yet unmatched pairs. 38740 records in RAM.
INFO	2026-06-08 08:54:15	MarkDuplicates	Read   179,000,000 records.  Elapsed time: 00:05:19s.  Time for last 1,000,000:    1s.  Last read position: chr6:30,713,703
INFO	2026-06-08 08:54:15	MarkDuplicates	Tracking 685963 as yet unmatched pairs. 37225 records in RAM.
INFO	2026-06-08 08:54:17	MarkDuplicates	Read   180,000,000 records.  Elapsed time: 00:05:21s.  Time for last 1,000,000:    1s.  Last read position: chr6:31,627,815
INFO	2026-06-08 08:54:17	MarkDuplicates	Tracking 684655 as yet unmatched pairs. 35899 records in RAM.
INFO	2026-06-08 08:54:18	MarkDuplicates	Read   181,000,000 records.  Elapsed time: 00:05:22s.  Time for last 1,000,000:    1s.  Last read position: chr6:31,829,431
INFO	2026-06-08 08:54:18	MarkDuplicates	Tracking 683050 as yet unmatched pairs. 34289 records in RAM.
INFO	2026-06-08 08:54:20	MarkDuplicates	Read   182,000,000 records.  Elapsed time: 00:05:24s.  Time for last 1,000,000:    1s.  Last read position: chr6:31,994,543
INFO	2026-06-08 08:54:20	MarkDuplicates	Tracking 691874 as yet unmatched pairs. 43104 records in RAM.
INFO	2026-06-08 08:54:22	MarkDuplicates	Read   183,000,000 records.  Elapsed time: 00:05:25s.  Time for last 1,000,000:    1s.  Last read position: chr6:32,026,278
INFO	2026-06-08 08:54:22	MarkDuplicates	Tracking 689405 as yet unmatched pairs. 40625 records in RAM.
INFO	2026-06-08 08:54:23	MarkDuplicates	Read   184,000,000 records.  Elapsed time: 00:05:27s.  Time for last 1,000,000:    1s.  Last read position: chr6:32,089,012
INFO	2026-06-08 08:54:23	MarkDuplicates	Tracking 679576 as yet unmatched pairs. 30790 records in RAM.
INFO	2026-06-08 08:54:25	MarkDuplicates	Read   185,000,000 records.  Elapsed time: 00:05:29s.  Time for last 1,000,000:    1s.  Last read position: chr6:32,977,395
INFO	2026-06-08 08:54:25	MarkDuplicates	Tracking 677838 as yet unmatched pairs. 29036 records in RAM.
INFO	2026-06-08 08:54:26	MarkDuplicates	Read   186,000,000 records.  Elapsed time: 00:05:30s.  Time for last 1,000,000:    1s.  Last read position: chr6:33,412,738
INFO	2026-06-08 08:54:26	MarkDuplicates	Tracking 677350 as yet unmatched pairs. 28534 records in RAM.
INFO	2026-06-08 08:54:28	MarkDuplicates	Read   187,000,000 records.  Elapsed time: 00:05:32s.  Time for last 1,000,000:    1s.  Last read position: chr6:36,214,219
INFO	2026-06-08 08:54:28	MarkDuplicates	Tracking 673630 as yet unmatched pairs. 24791 records in RAM.
INFO	2026-06-08 08:54:30	MarkDuplicates	Read   188,000,000 records.  Elapsed time: 00:05:34s.  Time for last 1,000,000:    1s.  Last read position: chr6:42,978,872
INFO	2026-06-08 08:54:30	MarkDuplicates	Tracking 671707 as yet unmatched pairs. 22842 records in RAM.
INFO	2026-06-08 08:54:31	MarkDuplicates	Read   189,000,000 records.  Elapsed time: 00:05:35s.  Time for last 1,000,000:    1s.  Last read position: chr6:44,251,060
INFO	2026-06-08 08:54:31	MarkDuplicates	Tracking 670823 as yet unmatched pairs. 21942 records in RAM.
INFO	2026-06-08 08:54:33	MarkDuplicates	Read   190,000,000 records.  Elapsed time: 00:05:37s.  Time for last 1,000,000:    1s.  Last read position: chr6:56,573,700
INFO	2026-06-08 08:54:33	MarkDuplicates	Tracking 668366 as yet unmatched pairs. 19407 records in RAM.
INFO	2026-06-08 08:54:35	MarkDuplicates	Read   191,000,000 records.  Elapsed time: 00:05:39s.  Time for last 1,000,000:    1s.  Last read position: chr6:75,117,482
INFO	2026-06-08 08:54:35	MarkDuplicates	Tracking 668708 as yet unmatched pairs. 19737 records in RAM.
INFO	2026-06-08 08:54:36	MarkDuplicates	Read   192,000,000 records.  Elapsed time: 00:05:40s.  Time for last 1,000,000:    1s.  Last read position: chr6:75,858,922
INFO	2026-06-08 08:54:36	MarkDuplicates	Tracking 666187 as yet unmatched pairs. 17196 records in RAM.
INFO	2026-06-08 08:54:38	MarkDuplicates	Read   193,000,000 records.  Elapsed time: 00:05:42s.  Time for last 1,000,000:    1s.  Last read position: chr6:89,683,810
INFO	2026-06-08 08:54:38	MarkDuplicates	Tracking 663674 as yet unmatched pairs. 14657 records in RAM.
INFO	2026-06-08 08:54:41	MarkDuplicates	Read   194,000,000 records.  Elapsed time: 00:05:44s.  Time for last 1,000,000:    2s.  Last read position: chr6:109,382,280
INFO	2026-06-08 08:54:41	MarkDuplicates	Tracking 662703 as yet unmatched pairs. 13654 records in RAM.
INFO	2026-06-08 08:54:43	MarkDuplicates	Read   195,000,000 records.  Elapsed time: 00:05:47s.  Time for last 1,000,000:    2s.  Last read position: chr6:118,558,937
INFO	2026-06-08 08:54:43	MarkDuplicates	Tracking 660510 as yet unmatched pairs. 11435 records in RAM.
INFO	2026-06-08 08:54:45	MarkDuplicates	Read   196,000,000 records.  Elapsed time: 00:05:49s.  Time for last 1,000,000:    1s.  Last read position: chr6:131,950,292
INFO	2026-06-08 08:54:45	MarkDuplicates	Tracking 661848 as yet unmatched pairs. 12756 records in RAM.
INFO	2026-06-08 08:54:47	MarkDuplicates	Read   197,000,000 records.  Elapsed time: 00:05:51s.  Time for last 1,000,000:    1s.  Last read position: chr6:139,174,385
INFO	2026-06-08 08:54:47	MarkDuplicates	Tracking 657053 as yet unmatched pairs. 7946 records in RAM.
INFO	2026-06-08 08:54:48	MarkDuplicates	Read   198,000,000 records.  Elapsed time: 00:05:52s.  Time for last 1,000,000:    1s.  Last read position: chr6:151,240,674
INFO	2026-06-08 08:54:48	MarkDuplicates	Tracking 656161 as yet unmatched pairs. 7034 records in RAM.
INFO	2026-06-08 08:54:50	MarkDuplicates	Read   199,000,000 records.  Elapsed time: 00:05:54s.  Time for last 1,000,000:    1s.  Last read position: chr6:157,201,217
INFO	2026-06-08 08:54:50	MarkDuplicates	Tracking 653912 as yet unmatched pairs. 4773 records in RAM.
INFO	2026-06-08 08:54:52	MarkDuplicates	Read   200,000,000 records.  Elapsed time: 00:05:56s.  Time for last 1,000,000:    1s.  Last read position: chr6:160,040,607
INFO	2026-06-08 08:54:52	MarkDuplicates	Tracking 652263 as yet unmatched pairs. 3109 records in RAM.
INFO	2026-06-08 08:54:53	MarkDuplicates	Read   201,000,000 records.  Elapsed time: 00:05:57s.  Time for last 1,000,000:    1s.  Last read position: chr6:169,232,186
INFO	2026-06-08 08:54:53	MarkDuplicates	Tracking 656358 as yet unmatched pairs. 7167 records in RAM.
INFO	2026-06-08 08:54:55	MarkDuplicates	Read   202,000,000 records.  Elapsed time: 00:05:59s.  Time for last 1,000,000:    1s.  Last read position: chr7:1,489,661
INFO	2026-06-08 08:54:55	MarkDuplicates	Tracking 649049 as yet unmatched pairs. 45648 records in RAM.
INFO	2026-06-08 08:54:57	MarkDuplicates	Read   203,000,000 records.  Elapsed time: 00:06:01s.  Time for last 1,000,000:    1s.  Last read position: chr7:5,388,743
INFO	2026-06-08 08:54:57	MarkDuplicates	Tracking 646682 as yet unmatched pairs. 43255 records in RAM.
INFO	2026-06-08 08:54:59	MarkDuplicates	Read   204,000,000 records.  Elapsed time: 00:06:03s.  Time for last 1,000,000:    1s.  Last read position: chr7:5,529,280
INFO	2026-06-08 08:54:59	MarkDuplicates	Tracking 662949 as yet unmatched pairs. 59497 records in RAM.
INFO	2026-06-08 08:55:00	MarkDuplicates	Read   205,000,000 records.  Elapsed time: 00:06:04s.  Time for last 1,000,000:    1s.  Last read position: chr7:16,698,167
INFO	2026-06-08 08:55:00	MarkDuplicates	Tracking 643173 as yet unmatched pairs. 39684 records in RAM.
INFO	2026-06-08 08:55:02	MarkDuplicates	Read   206,000,000 records.  Elapsed time: 00:06:06s.  Time for last 1,000,000:    1s.  Last read position: chr7:30,609,629
INFO	2026-06-08 08:55:02	MarkDuplicates	Tracking 641649 as yet unmatched pairs. 38139 records in RAM.
INFO	2026-06-08 08:55:04	MarkDuplicates	Read   207,000,000 records.  Elapsed time: 00:06:07s.  Time for last 1,000,000:    1s.  Last read position: chr7:42,924,741
INFO	2026-06-08 08:55:04	MarkDuplicates	Tracking 640071 as yet unmatched pairs. 36527 records in RAM.
INFO	2026-06-08 08:55:06	MarkDuplicates	Read   208,000,000 records.  Elapsed time: 00:06:10s.  Time for last 1,000,000:    2s.  Last read position: chr7:44,114,231
INFO	2026-06-08 08:55:06	MarkDuplicates	Tracking 638257 as yet unmatched pairs. 34693 records in RAM.
INFO	2026-06-08 08:55:08	MarkDuplicates	Read   209,000,000 records.  Elapsed time: 00:06:12s.  Time for last 1,000,000:    1s.  Last read position: chr7:55,401,222
INFO	2026-06-08 08:55:08	MarkDuplicates	Tracking 636082 as yet unmatched pairs. 32471 records in RAM.
INFO	2026-06-08 08:55:10	MarkDuplicates	Read   210,000,000 records.  Elapsed time: 00:06:14s.  Time for last 1,000,000:    1s.  Last read position: chr7:73,026,726
INFO	2026-06-08 08:55:10	MarkDuplicates	Tracking 634915 as yet unmatched pairs. 31287 records in RAM.
INFO	2026-06-08 08:55:11	MarkDuplicates	Read   211,000,000 records.  Elapsed time: 00:06:15s.  Time for last 1,000,000:    1s.  Last read position: chr7:74,097,141
INFO	2026-06-08 08:55:11	MarkDuplicates	Tracking 633515 as yet unmatched pairs. 29881 records in RAM.
INFO	2026-06-08 08:55:13	MarkDuplicates	Read   212,000,000 records.  Elapsed time: 00:06:17s.  Time for last 1,000,000:    1s.  Last read position: chr7:75,501,406
INFO	2026-06-08 08:55:13	MarkDuplicates	Tracking 632130 as yet unmatched pairs. 28493 records in RAM.
INFO	2026-06-08 08:55:15	MarkDuplicates	Read   213,000,000 records.  Elapsed time: 00:06:18s.  Time for last 1,000,000:    1s.  Last read position: chr7:80,789,344
INFO	2026-06-08 08:55:15	MarkDuplicates	Tracking 630824 as yet unmatched pairs. 27179 records in RAM.
INFO	2026-06-08 08:55:16	MarkDuplicates	Read   214,000,000 records.  Elapsed time: 00:06:20s.  Time for last 1,000,000:    1s.  Last read position: chr7:92,099,693
INFO	2026-06-08 08:55:16	MarkDuplicates	Tracking 630101 as yet unmatched pairs. 26429 records in RAM.
INFO	2026-06-08 08:55:18	MarkDuplicates	Read   215,000,000 records.  Elapsed time: 00:06:22s.  Time for last 1,000,000:    1s.  Last read position: chr7:94,405,216
INFO	2026-06-08 08:55:18	MarkDuplicates	Tracking 637773 as yet unmatched pairs. 34075 records in RAM.
INFO	2026-06-08 08:55:20	MarkDuplicates	Read   216,000,000 records.  Elapsed time: 00:06:24s.  Time for last 1,000,000:    1s.  Last read position: chr7:94,411,145
INFO	2026-06-08 08:55:20	MarkDuplicates	Tracking 645775 as yet unmatched pairs. 42051 records in RAM.
INFO	2026-06-08 08:55:21	MarkDuplicates	Read   217,000,000 records.  Elapsed time: 00:06:25s.  Time for last 1,000,000:    1s.  Last read position: chr7:94,421,914
INFO	2026-06-08 08:55:21	MarkDuplicates	Tracking 644110 as yet unmatched pairs. 40360 records in RAM.
INFO	2026-06-08 08:55:23	MarkDuplicates	Read   218,000,000 records.  Elapsed time: 00:06:27s.  Time for last 1,000,000:    1s.  Last read position: chr7:94,429,296
INFO	2026-06-08 08:55:23	MarkDuplicates	Tracking 628389 as yet unmatched pairs. 24625 records in RAM.
INFO	2026-06-08 08:55:25	MarkDuplicates	Read   219,000,000 records.  Elapsed time: 00:06:29s.  Time for last 1,000,000:    1s.  Last read position: chr7:99,629,400
INFO	2026-06-08 08:55:25	MarkDuplicates	Tracking 620428 as yet unmatched pairs. 16646 records in RAM.
INFO	2026-06-08 08:55:26	MarkDuplicates	Read   220,000,000 records.  Elapsed time: 00:06:30s.  Time for last 1,000,000:    1s.  Last read position: chr7:100,572,543
INFO	2026-06-08 08:55:26	MarkDuplicates	Tracking 618619 as yet unmatched pairs. 14816 records in RAM.
INFO	2026-06-08 08:55:28	MarkDuplicates	Read   221,000,000 records.  Elapsed time: 00:06:32s.  Time for last 1,000,000:    1s.  Last read position: chr7:102,446,828
INFO	2026-06-08 08:55:28	MarkDuplicates	Tracking 617009 as yet unmatched pairs. 13198 records in RAM.
INFO	2026-06-08 08:55:30	MarkDuplicates	Read   222,000,000 records.  Elapsed time: 00:06:34s.  Time for last 1,000,000:    2s.  Last read position: chr7:106,091,871
INFO	2026-06-08 08:55:30	MarkDuplicates	Tracking 616249 as yet unmatched pairs. 12416 records in RAM.
INFO	2026-06-08 08:55:32	MarkDuplicates	Read   223,000,000 records.  Elapsed time: 00:06:36s.  Time for last 1,000,000:    1s.  Last read position: chr7:122,438,443
INFO	2026-06-08 08:55:32	MarkDuplicates	Tracking 614656 as yet unmatched pairs. 10798 records in RAM.
INFO	2026-06-08 08:55:34	MarkDuplicates	Read   224,000,000 records.  Elapsed time: 00:06:38s.  Time for last 1,000,000:    1s.  Last read position: chr7:128,657,570
INFO	2026-06-08 08:55:34	MarkDuplicates	Tracking 613187 as yet unmatched pairs. 9312 records in RAM.
INFO	2026-06-08 08:55:36	MarkDuplicates	Read   225,000,000 records.  Elapsed time: 00:06:40s.  Time for last 1,000,000:    1s.  Last read position: chr7:137,885,026
INFO	2026-06-08 08:55:36	MarkDuplicates	Tracking 613793 as yet unmatched pairs. 9870 records in RAM.
INFO	2026-06-08 08:55:38	MarkDuplicates	Read   226,000,000 records.  Elapsed time: 00:06:42s.  Time for last 1,000,000:    1s.  Last read position: chr7:141,010,419
INFO	2026-06-08 08:55:38	MarkDuplicates	Tracking 609461 as yet unmatched pairs. 5509 records in RAM.
INFO	2026-06-08 08:55:39	MarkDuplicates	Read   227,000,000 records.  Elapsed time: 00:06:43s.  Time for last 1,000,000:    1s.  Last read position: chr7:144,299,821
INFO	2026-06-08 08:55:39	MarkDuplicates	Tracking 607615 as yet unmatched pairs. 3635 records in RAM.
INFO	2026-06-08 08:55:41	MarkDuplicates	Read   228,000,000 records.  Elapsed time: 00:06:45s.  Time for last 1,000,000:    1s.  Last read position: chr7:151,082,239
INFO	2026-06-08 08:55:41	MarkDuplicates	Tracking 606152 as yet unmatched pairs. 2147 records in RAM.
INFO	2026-06-08 08:55:43	MarkDuplicates	Read   229,000,000 records.  Elapsed time: 00:06:46s.  Time for last 1,000,000:    1s.  Last read position: chr7:158,905,231
INFO	2026-06-08 08:55:43	MarkDuplicates	Tracking 604182 as yet unmatched pairs. 168 records in RAM.
INFO	2026-06-08 08:55:44	MarkDuplicates	Read   230,000,000 records.  Elapsed time: 00:06:48s.  Time for last 1,000,000:    1s.  Last read position: chr8:17,543,422
INFO	2026-06-08 08:55:44	MarkDuplicates	Tracking 602526 as yet unmatched pairs. 29244 records in RAM.
INFO	2026-06-08 08:55:46	MarkDuplicates	Read   231,000,000 records.  Elapsed time: 00:06:50s.  Time for last 1,000,000:    1s.  Last read position: chr8:22,614,119
INFO	2026-06-08 08:55:46	MarkDuplicates	Tracking 602332 as yet unmatched pairs. 29034 records in RAM.
INFO	2026-06-08 08:55:48	MarkDuplicates	Read   232,000,000 records.  Elapsed time: 00:06:51s.  Time for last 1,000,000:    1s.  Last read position: chr8:28,731,304
INFO	2026-06-08 08:55:48	MarkDuplicates	Tracking 599012 as yet unmatched pairs. 25686 records in RAM.
INFO	2026-06-08 08:55:49	MarkDuplicates	Read   233,000,000 records.  Elapsed time: 00:06:53s.  Time for last 1,000,000:    1s.  Last read position: chr8:38,192,746
INFO	2026-06-08 08:55:49	MarkDuplicates	Tracking 597390 as yet unmatched pairs. 24054 records in RAM.
INFO	2026-06-08 08:55:51	MarkDuplicates	Read   234,000,000 records.  Elapsed time: 00:06:55s.  Time for last 1,000,000:    1s.  Last read position: chr8:38,991,278
INFO	2026-06-08 08:55:51	MarkDuplicates	Tracking 595620 as yet unmatched pairs. 22279 records in RAM.
INFO	2026-06-08 08:55:53	MarkDuplicates	Read   235,000,000 records.  Elapsed time: 00:06:57s.  Time for last 1,000,000:    1s.  Last read position: chr8:48,921,197
INFO	2026-06-08 08:55:53	MarkDuplicates	Tracking 593986 as yet unmatched pairs. 20626 records in RAM.
INFO	2026-06-08 08:55:54	MarkDuplicates	Read   236,000,000 records.  Elapsed time: 00:06:58s.  Time for last 1,000,000:    1s.  Last read position: chr8:67,939,045
INFO	2026-06-08 08:55:54	MarkDuplicates	Tracking 592224 as yet unmatched pairs. 18833 records in RAM.
INFO	2026-06-08 08:55:56	MarkDuplicates	Read   237,000,000 records.  Elapsed time: 00:07:00s.  Time for last 1,000,000:    1s.  Last read position: chr8:85,215,004
INFO	2026-06-08 08:55:56	MarkDuplicates	Tracking 590902 as yet unmatched pairs. 17497 records in RAM.
INFO	2026-06-08 08:55:58	MarkDuplicates	Read   238,000,000 records.  Elapsed time: 00:07:02s.  Time for last 1,000,000:    2s.  Last read position: chr8:99,661,366
INFO	2026-06-08 08:55:58	MarkDuplicates	Tracking 589423 as yet unmatched pairs. 15984 records in RAM.
INFO	2026-06-08 08:56:00	MarkDuplicates	Read   239,000,000 records.  Elapsed time: 00:07:04s.  Time for last 1,000,000:    2s.  Last read position: chr8:103,378,081
INFO	2026-06-08 08:56:00	MarkDuplicates	Tracking 590670 as yet unmatched pairs. 17212 records in RAM.
INFO	2026-06-08 08:56:03	MarkDuplicates	Read   240,000,000 records.  Elapsed time: 00:07:06s.  Time for last 1,000,000:    2s.  Last read position: chr8:116,863,064
INFO	2026-06-08 08:56:03	MarkDuplicates	Tracking 586554 as yet unmatched pairs. 13068 records in RAM.
INFO	2026-06-08 08:56:04	MarkDuplicates	Read   241,000,000 records.  Elapsed time: 00:07:08s.  Time for last 1,000,000:    1s.  Last read position: chr8:127,738,538
INFO	2026-06-08 08:56:04	MarkDuplicates	Tracking 585698 as yet unmatched pairs. 12201 records in RAM.
INFO	2026-06-08 08:56:06	MarkDuplicates	Read   242,000,000 records.  Elapsed time: 00:07:10s.  Time for last 1,000,000:    1s.  Last read position: chr8:143,580,610
INFO	2026-06-08 08:56:06	MarkDuplicates	Tracking 583933 as yet unmatched pairs. 10404 records in RAM.
INFO	2026-06-08 08:56:08	MarkDuplicates	Read   243,000,000 records.  Elapsed time: 00:07:11s.  Time for last 1,000,000:    1s.  Last read position: chr8:143,859,748
INFO	2026-06-08 08:56:08	MarkDuplicates	Tracking 581940 as yet unmatched pairs. 8403 records in RAM.
INFO	2026-06-08 08:56:09	MarkDuplicates	Read   244,000,000 records.  Elapsed time: 00:07:13s.  Time for last 1,000,000:    1s.  Last read position: chr8:143,863,012
INFO	2026-06-08 08:56:09	MarkDuplicates	Tracking 585230 as yet unmatched pairs. 11684 records in RAM.
INFO	2026-06-08 08:56:10	MarkDuplicates	Read   245,000,000 records.  Elapsed time: 00:07:14s.  Time for last 1,000,000:    1s.  Last read position: chr8:143,866,870
INFO	2026-06-08 08:56:10	MarkDuplicates	Tracking 580301 as yet unmatched pairs. 6755 records in RAM.
INFO	2026-06-08 08:56:12	MarkDuplicates	Read   246,000,000 records.  Elapsed time: 00:07:15s.  Time for last 1,000,000:    1s.  Last read position: chr8:143,924,583
INFO	2026-06-08 08:56:12	MarkDuplicates	Tracking 577505 as yet unmatched pairs. 3950 records in RAM.
INFO	2026-06-08 08:56:13	MarkDuplicates	Read   247,000,000 records.  Elapsed time: 00:07:17s.  Time for last 1,000,000:    1s.  Last read position: chr8:144,394,667
INFO	2026-06-08 08:56:13	MarkDuplicates	Tracking 575121 as yet unmatched pairs. 1554 records in RAM.
INFO	2026-06-08 08:57:26	MarkDuplicates	Read   248,000,000 records.  Elapsed time: 00:08:30s.  Time for last 1,000,000:   73s.  Last read position: chr9:3,898,759
INFO	2026-06-08 08:57:26	MarkDuplicates	Tracking 573119 as yet unmatched pairs. 34939 records in RAM.
INFO	2026-06-08 08:57:28	MarkDuplicates	Read   249,000,000 records.  Elapsed time: 00:08:32s.  Time for last 1,000,000:    1s.  Last read position: chr9:15,721,769
INFO	2026-06-08 08:57:28	MarkDuplicates	Tracking 571636 as yet unmatched pairs. 33426 records in RAM.
INFO	2026-06-08 08:57:30	MarkDuplicates	Read   250,000,000 records.  Elapsed time: 00:08:33s.  Time for last 1,000,000:    1s.  Last read position: chr9:33,917,180
INFO	2026-06-08 08:57:30	MarkDuplicates	Tracking 570221 as yet unmatched pairs. 31990 records in RAM.
INFO	2026-06-08 08:57:31	MarkDuplicates	Read   251,000,000 records.  Elapsed time: 00:08:35s.  Time for last 1,000,000:    1s.  Last read position: chr9:35,719,809
INFO	2026-06-08 08:57:31	MarkDuplicates	Tracking 569089 as yet unmatched pairs. 30842 records in RAM.
INFO	2026-06-08 08:57:33	MarkDuplicates	Read   252,000,000 records.  Elapsed time: 00:08:37s.  Time for last 1,000,000:    1s.  Last read position: chr9:69,750,912
INFO	2026-06-08 08:57:33	MarkDuplicates	Tracking 566621 as yet unmatched pairs. 28350 records in RAM.
INFO	2026-06-08 08:57:35	MarkDuplicates	Read   253,000,000 records.  Elapsed time: 00:08:39s.  Time for last 1,000,000:    1s.  Last read position: chr9:86,945,932
INFO	2026-06-08 08:57:35	MarkDuplicates	Tracking 565262 as yet unmatched pairs. 26986 records in RAM.
INFO	2026-06-08 08:57:37	MarkDuplicates	Read   254,000,000 records.  Elapsed time: 00:08:40s.  Time for last 1,000,000:    1s.  Last read position: chr9:93,471,327
INFO	2026-06-08 08:57:37	MarkDuplicates	Tracking 564307 as yet unmatched pairs. 26016 records in RAM.
INFO	2026-06-08 08:57:38	MarkDuplicates	Read   255,000,000 records.  Elapsed time: 00:08:42s.  Time for last 1,000,000:    1s.  Last read position: chr9:104,786,922
INFO	2026-06-08 08:57:38	MarkDuplicates	Tracking 561906 as yet unmatched pairs. 23596 records in RAM.
INFO	2026-06-08 08:57:40	MarkDuplicates	Read   256,000,000 records.  Elapsed time: 00:08:44s.  Time for last 1,000,000:    1s.  Last read position: chr9:113,166,127
INFO	2026-06-08 08:57:40	MarkDuplicates	Tracking 560400 as yet unmatched pairs. 22078 records in RAM.
INFO	2026-06-08 08:57:42	MarkDuplicates	Read   257,000,000 records.  Elapsed time: 00:08:45s.  Time for last 1,000,000:    1s.  Last read position: chr9:115,059,867
INFO	2026-06-08 08:57:42	MarkDuplicates	Tracking 560927 as yet unmatched pairs. 22595 records in RAM.
INFO	2026-06-08 08:57:43	MarkDuplicates	Read   258,000,000 records.  Elapsed time: 00:08:47s.  Time for last 1,000,000:    1s.  Last read position: chr9:121,098,514
INFO	2026-06-08 08:57:43	MarkDuplicates	Tracking 556699 as yet unmatched pairs. 18347 records in RAM.
INFO	2026-06-08 08:57:45	MarkDuplicates	Read   259,000,000 records.  Elapsed time: 00:08:49s.  Time for last 1,000,000:    1s.  Last read position: chr9:124,976,140
INFO	2026-06-08 08:57:45	MarkDuplicates	Tracking 554820 as yet unmatched pairs. 16434 records in RAM.
INFO	2026-06-08 08:57:46	MarkDuplicates	Read   260,000,000 records.  Elapsed time: 00:08:50s.  Time for last 1,000,000:    1s.  Last read position: chr9:128,123,710
INFO	2026-06-08 08:57:46	MarkDuplicates	Tracking 553134 as yet unmatched pairs. 14739 records in RAM.
INFO	2026-06-08 08:57:49	MarkDuplicates	Read   261,000,000 records.  Elapsed time: 00:08:53s.  Time for last 1,000,000:    2s.  Last read position: chr9:128,828,751
INFO	2026-06-08 08:57:49	MarkDuplicates	Tracking 550928 as yet unmatched pairs. 12532 records in RAM.
INFO	2026-06-08 08:57:51	MarkDuplicates	Read   262,000,000 records.  Elapsed time: 00:08:54s.  Time for last 1,000,000:    1s.  Last read position: chr9:130,884,594
INFO	2026-06-08 08:57:51	MarkDuplicates	Tracking 550202 as yet unmatched pairs. 11791 records in RAM.
INFO	2026-06-08 08:57:52	MarkDuplicates	Read   263,000,000 records.  Elapsed time: 00:08:56s.  Time for last 1,000,000:    1s.  Last read position: chr9:133,102,118
INFO	2026-06-08 08:57:52	MarkDuplicates	Tracking 547882 as yet unmatched pairs. 9441 records in RAM.
INFO	2026-06-08 08:57:54	MarkDuplicates	Read   264,000,000 records.  Elapsed time: 00:08:58s.  Time for last 1,000,000:    1s.  Last read position: chr9:134,750,830
INFO	2026-06-08 08:57:54	MarkDuplicates	Tracking 552053 as yet unmatched pairs. 13602 records in RAM.
INFO	2026-06-08 08:57:56	MarkDuplicates	Read   265,000,000 records.  Elapsed time: 00:09:00s.  Time for last 1,000,000:    2s.  Last read position: chr9:134,834,986
INFO	2026-06-08 08:57:56	MarkDuplicates	Tracking 546337 as yet unmatched pairs. 7883 records in RAM.
INFO	2026-06-08 08:57:59	MarkDuplicates	Read   266,000,000 records.  Elapsed time: 00:09:02s.  Time for last 1,000,000:    2s.  Last read position: chr9:136,837,343
INFO	2026-06-08 08:57:59	MarkDuplicates	Tracking 542459 as yet unmatched pairs. 3988 records in RAM.
INFO	2026-06-08 08:58:00	MarkDuplicates	Read   267,000,000 records.  Elapsed time: 00:09:04s.  Time for last 1,000,000:    1s.  Last read position: chr9:137,480,979
INFO	2026-06-08 08:58:00	MarkDuplicates	Tracking 539089 as yet unmatched pairs. 604 records in RAM.
INFO	2026-06-08 08:58:02	MarkDuplicates	Read   268,000,000 records.  Elapsed time: 00:09:06s.  Time for last 1,000,000:    1s.  Last read position: chr10:6,203,238
INFO	2026-06-08 08:58:02	MarkDuplicates	Tracking 537787 as yet unmatched pairs. 27713 records in RAM.
INFO	2026-06-08 08:58:04	MarkDuplicates	Read   269,000,000 records.  Elapsed time: 00:09:08s.  Time for last 1,000,000:    1s.  Last read position: chr10:17,235,852
INFO	2026-06-08 08:58:04	MarkDuplicates	Tracking 537945 as yet unmatched pairs. 27859 records in RAM.
INFO	2026-06-08 08:58:05	MarkDuplicates	Read   270,000,000 records.  Elapsed time: 00:09:09s.  Time for last 1,000,000:    1s.  Last read position: chr10:27,223,393
INFO	2026-06-08 08:58:05	MarkDuplicates	Tracking 534232 as yet unmatched pairs. 24140 records in RAM.
INFO	2026-06-08 08:58:07	MarkDuplicates	Read   271,000,000 records.  Elapsed time: 00:09:11s.  Time for last 1,000,000:    1s.  Last read position: chr10:32,463,027
INFO	2026-06-08 08:58:07	MarkDuplicates	Tracking 532807 as yet unmatched pairs. 22707 records in RAM.
INFO	2026-06-08 08:58:09	MarkDuplicates	Read   272,000,000 records.  Elapsed time: 00:09:12s.  Time for last 1,000,000:    1s.  Last read position: chr10:37,197,422
INFO	2026-06-08 08:58:09	MarkDuplicates	Tracking 544907 as yet unmatched pairs. 34798 records in RAM.
INFO	2026-06-08 08:58:10	MarkDuplicates	Read   273,000,000 records.  Elapsed time: 00:09:14s.  Time for last 1,000,000:    1s.  Last read position: chr10:45,787,228
INFO	2026-06-08 08:58:10	MarkDuplicates	Tracking 530309 as yet unmatched pairs. 20140 records in RAM.
INFO	2026-06-08 08:58:12	MarkDuplicates	Read   274,000,000 records.  Elapsed time: 00:09:16s.  Time for last 1,000,000:    1s.  Last read position: chr10:58,237,760
INFO	2026-06-08 08:58:12	MarkDuplicates	Tracking 528910 as yet unmatched pairs. 18728 records in RAM.
INFO	2026-06-08 08:58:13	MarkDuplicates	Read   275,000,000 records.  Elapsed time: 00:09:17s.  Time for last 1,000,000:    1s.  Last read position: chr10:69,088,132
INFO	2026-06-08 08:58:13	MarkDuplicates	Tracking 527446 as yet unmatched pairs. 17237 records in RAM.
INFO	2026-06-08 08:58:15	MarkDuplicates	Read   276,000,000 records.  Elapsed time: 00:09:19s.  Time for last 1,000,000:    1s.  Last read position: chr10:73,517,580
INFO	2026-06-08 08:58:15	MarkDuplicates	Tracking 525647 as yet unmatched pairs. 15398 records in RAM.
INFO	2026-06-08 08:58:17	MarkDuplicates	Read   277,000,000 records.  Elapsed time: 00:09:20s.  Time for last 1,000,000:    1s.  Last read position: chr10:77,833,976
INFO	2026-06-08 08:58:17	MarkDuplicates	Tracking 523828 as yet unmatched pairs. 13538 records in RAM.
INFO	2026-06-08 08:58:18	MarkDuplicates	Read   278,000,000 records.  Elapsed time: 00:09:22s.  Time for last 1,000,000:    1s.  Last read position: chr10:87,233,529
INFO	2026-06-08 08:58:18	MarkDuplicates	Tracking 522225 as yet unmatched pairs. 11923 records in RAM.
INFO	2026-06-08 08:58:20	MarkDuplicates	Read   279,000,000 records.  Elapsed time: 00:09:24s.  Time for last 1,000,000:    1s.  Last read position: chr10:94,339,832
INFO	2026-06-08 08:58:20	MarkDuplicates	Tracking 520802 as yet unmatched pairs. 10484 records in RAM.
INFO	2026-06-08 08:58:21	MarkDuplicates	Read   280,000,000 records.  Elapsed time: 00:09:25s.  Time for last 1,000,000:    1s.  Last read position: chr10:99,729,555
INFO	2026-06-08 08:58:21	MarkDuplicates	Tracking 519312 as yet unmatched pairs. 8989 records in RAM.
INFO	2026-06-08 08:58:23	MarkDuplicates	Read   281,000,000 records.  Elapsed time: 00:09:27s.  Time for last 1,000,000:    1s.  Last read position: chr10:102,423,566
INFO	2026-06-08 08:58:23	MarkDuplicates	Tracking 517613 as yet unmatched pairs. 7273 records in RAM.
INFO	2026-06-08 08:58:25	MarkDuplicates	Read   282,000,000 records.  Elapsed time: 00:09:29s.  Time for last 1,000,000:    2s.  Last read position: chr10:112,163,711
INFO	2026-06-08 08:58:25	MarkDuplicates	Tracking 516292 as yet unmatched pairs. 5930 records in RAM.
INFO	2026-06-08 08:58:27	MarkDuplicates	Read   283,000,000 records.  Elapsed time: 00:09:31s.  Time for last 1,000,000:    1s.  Last read position: chr10:119,902,875
INFO	2026-06-08 08:58:27	MarkDuplicates	Tracking 513937 as yet unmatched pairs. 3561 records in RAM.
INFO	2026-06-08 08:58:28	MarkDuplicates	Read   284,000,000 records.  Elapsed time: 00:09:32s.  Time for last 1,000,000:    1s.  Last read position: chr10:125,831,493
INFO	2026-06-08 08:58:28	MarkDuplicates	Tracking 511951 as yet unmatched pairs. 1564 records in RAM.
INFO	2026-06-08 08:58:30	MarkDuplicates	Read   285,000,000 records.  Elapsed time: 00:09:34s.  Time for last 1,000,000:    1s.  Last read position: chr11:293,625
INFO	2026-06-08 08:58:30	MarkDuplicates	Tracking 510890 as yet unmatched pairs. 51721 records in RAM.
INFO	2026-06-08 08:58:32	MarkDuplicates	Read   286,000,000 records.  Elapsed time: 00:09:36s.  Time for last 1,000,000:    1s.  Last read position: chr11:726,625
INFO	2026-06-08 08:58:32	MarkDuplicates	Tracking 508316 as yet unmatched pairs. 49139 records in RAM.
INFO	2026-06-08 08:58:34	MarkDuplicates	Read   287,000,000 records.  Elapsed time: 00:09:38s.  Time for last 1,000,000:    1s.  Last read position: chr11:1,017,872
INFO	2026-06-08 08:58:34	MarkDuplicates	Tracking 507707 as yet unmatched pairs. 48516 records in RAM.
INFO	2026-06-08 08:58:35	MarkDuplicates	Read   288,000,000 records.  Elapsed time: 00:09:39s.  Time for last 1,000,000:    1s.  Last read position: chr11:3,018,657
INFO	2026-06-08 08:58:35	MarkDuplicates	Tracking 504632 as yet unmatched pairs. 45419 records in RAM.
INFO	2026-06-08 08:58:37	MarkDuplicates	Read   289,000,000 records.  Elapsed time: 00:09:41s.  Time for last 1,000,000:    1s.  Last read position: chr11:6,626,792
INFO	2026-06-08 08:58:37	MarkDuplicates	Tracking 503339 as yet unmatched pairs. 44109 records in RAM.
INFO	2026-06-08 08:58:39	MarkDuplicates	Read   290,000,000 records.  Elapsed time: 00:09:43s.  Time for last 1,000,000:    2s.  Last read position: chr11:10,800,221
INFO	2026-06-08 08:58:39	MarkDuplicates	Tracking 503011 as yet unmatched pairs. 43767 records in RAM.
INFO	2026-06-08 08:58:41	MarkDuplicates	Read   291,000,000 records.  Elapsed time: 00:09:44s.  Time for last 1,000,000:    1s.  Last read position: chr11:18,242,746
INFO	2026-06-08 08:58:41	MarkDuplicates	Tracking 499122 as yet unmatched pairs. 39870 records in RAM.
INFO	2026-06-08 08:58:42	MarkDuplicates	Read   292,000,000 records.  Elapsed time: 00:09:46s.  Time for last 1,000,000:    1s.  Last read position: chr11:34,136,662
INFO	2026-06-08 08:58:42	MarkDuplicates	Tracking 497807 as yet unmatched pairs. 38533 records in RAM.
INFO	2026-06-08 08:58:44	MarkDuplicates	Read   293,000,000 records.  Elapsed time: 00:09:48s.  Time for last 1,000,000:    2s.  Last read position: chr11:46,347,757
INFO	2026-06-08 08:58:44	MarkDuplicates	Tracking 496524 as yet unmatched pairs. 37239 records in RAM.
INFO	2026-06-08 08:58:46	MarkDuplicates	Read   294,000,000 records.  Elapsed time: 00:09:50s.  Time for last 1,000,000:    1s.  Last read position: chr11:48,139,512
INFO	2026-06-08 08:58:46	MarkDuplicates	Tracking 494454 as yet unmatched pairs. 35151 records in RAM.
INFO	2026-06-08 08:58:48	MarkDuplicates	Read   295,000,000 records.  Elapsed time: 00:09:52s.  Time for last 1,000,000:    1s.  Last read position: chr11:58,609,939
INFO	2026-06-08 08:58:48	MarkDuplicates	Tracking 492564 as yet unmatched pairs. 33252 records in RAM.
INFO	2026-06-08 08:58:50	MarkDuplicates	Read   296,000,000 records.  Elapsed time: 00:09:53s.  Time for last 1,000,000:    1s.  Last read position: chr11:61,908,138
INFO	2026-06-08 08:58:50	MarkDuplicates	Tracking 491010 as yet unmatched pairs. 31686 records in RAM.
INFO	2026-06-08 08:58:51	MarkDuplicates	Read   297,000,000 records.  Elapsed time: 00:09:55s.  Time for last 1,000,000:    1s.  Last read position: chr11:62,524,506
INFO	2026-06-08 08:58:51	MarkDuplicates	Tracking 491622 as yet unmatched pairs. 32289 records in RAM.
INFO	2026-06-08 08:58:53	MarkDuplicates	Read   298,000,000 records.  Elapsed time: 00:09:57s.  Time for last 1,000,000:    1s.  Last read position: chr11:62,533,712
INFO	2026-06-08 08:58:53	MarkDuplicates	Tracking 489447 as yet unmatched pairs. 30111 records in RAM.
INFO	2026-06-08 08:58:55	MarkDuplicates	Read   299,000,000 records.  Elapsed time: 00:09:59s.  Time for last 1,000,000:    1s.  Last read position: chr11:63,490,995
INFO	2026-06-08 08:58:55	MarkDuplicates	Tracking 485862 as yet unmatched pairs. 26519 records in RAM.
INFO	2026-06-08 08:58:57	MarkDuplicates	Read   300,000,000 records.  Elapsed time: 00:10:00s.  Time for last 1,000,000:    1s.  Last read position: chr11:64,809,811
INFO	2026-06-08 08:58:57	MarkDuplicates	Tracking 484155 as yet unmatched pairs. 24804 records in RAM.
INFO	2026-06-08 08:58:58	MarkDuplicates	Read   301,000,000 records.  Elapsed time: 00:10:02s.  Time for last 1,000,000:    1s.  Last read position: chr11:65,554,277
INFO	2026-06-08 08:58:58	MarkDuplicates	Tracking 483490 as yet unmatched pairs. 24078 records in RAM.
INFO	2026-06-08 08:59:00	MarkDuplicates	Read   302,000,000 records.  Elapsed time: 00:10:04s.  Time for last 1,000,000:    1s.  Last read position: chr11:66,055,268
INFO	2026-06-08 08:59:00	MarkDuplicates	Tracking 479965 as yet unmatched pairs. 20545 records in RAM.
INFO	2026-06-08 08:59:02	MarkDuplicates	Read   303,000,000 records.  Elapsed time: 00:10:05s.  Time for last 1,000,000:    1s.  Last read position: chr11:67,254,917
INFO	2026-06-08 08:59:02	MarkDuplicates	Tracking 478644 as yet unmatched pairs. 19217 records in RAM.
INFO	2026-06-08 08:59:03	MarkDuplicates	Read   304,000,000 records.  Elapsed time: 00:10:07s.  Time for last 1,000,000:    1s.  Last read position: chr11:69,005,727
INFO	2026-06-08 08:59:03	MarkDuplicates	Tracking 475931 as yet unmatched pairs. 16466 records in RAM.
INFO	2026-06-08 08:59:05	MarkDuplicates	Read   305,000,000 records.  Elapsed time: 00:10:09s.  Time for last 1,000,000:    1s.  Last read position: chr11:72,022,378
INFO	2026-06-08 08:59:05	MarkDuplicates	Tracking 475363 as yet unmatched pairs. 15872 records in RAM.
INFO	2026-06-08 08:59:07	MarkDuplicates	Read   306,000,000 records.  Elapsed time: 00:10:10s.  Time for last 1,000,000:    1s.  Last read position: chr11:75,169,206
INFO	2026-06-08 08:59:07	MarkDuplicates	Tracking 472750 as yet unmatched pairs. 13223 records in RAM.
INFO	2026-06-08 08:59:08	MarkDuplicates	Read   307,000,000 records.  Elapsed time: 00:10:12s.  Time for last 1,000,000:    1s.  Last read position: chr11:83,166,577
INFO	2026-06-08 08:59:08	MarkDuplicates	Tracking 470712 as yet unmatched pairs. 11177 records in RAM.
INFO	2026-06-08 08:59:10	MarkDuplicates	Read   308,000,000 records.  Elapsed time: 00:10:14s.  Time for last 1,000,000:    1s.  Last read position: chr11:102,110,948
INFO	2026-06-08 08:59:10	MarkDuplicates	Tracking 472248 as yet unmatched pairs. 12695 records in RAM.
INFO	2026-06-08 08:59:12	MarkDuplicates	Read   309,000,000 records.  Elapsed time: 00:10:15s.  Time for last 1,000,000:    1s.  Last read position: chr11:112,025,559
INFO	2026-06-08 08:59:12	MarkDuplicates	Tracking 467478 as yet unmatched pairs. 7914 records in RAM.
INFO	2026-06-08 08:59:13	MarkDuplicates	Read   310,000,000 records.  Elapsed time: 00:10:17s.  Time for last 1,000,000:    1s.  Last read position: chr11:118,474,146
INFO	2026-06-08 08:59:13	MarkDuplicates	Tracking 465905 as yet unmatched pairs. 6325 records in RAM.
INFO	2026-06-08 08:59:15	MarkDuplicates	Read   311,000,000 records.  Elapsed time: 00:10:18s.  Time for last 1,000,000:    1s.  Last read position: chr11:119,078,865
INFO	2026-06-08 08:59:15	MarkDuplicates	Tracking 463757 as yet unmatched pairs. 4136 records in RAM.
INFO	2026-06-08 08:59:16	MarkDuplicates	Read   312,000,000 records.  Elapsed time: 00:10:20s.  Time for last 1,000,000:    1s.  Last read position: chr11:124,637,133
INFO	2026-06-08 08:59:16	MarkDuplicates	Tracking 461846 as yet unmatched pairs. 2220 records in RAM.
INFO	2026-06-08 08:59:18	MarkDuplicates	Read   313,000,000 records.  Elapsed time: 00:10:22s.  Time for last 1,000,000:    2s.  Last read position: chr11:130,473,121
INFO	2026-06-08 08:59:18	MarkDuplicates	Tracking 460121 as yet unmatched pairs. 476 records in RAM.
INFO	2026-06-08 08:59:21	MarkDuplicates	Read   314,000,000 records.  Elapsed time: 00:10:24s.  Time for last 1,000,000:    2s.  Last read position: chr12:4,274,141
INFO	2026-06-08 08:59:21	MarkDuplicates	Tracking 458809 as yet unmatched pairs. 45430 records in RAM.
INFO	2026-06-08 08:59:22	MarkDuplicates	Read   315,000,000 records.  Elapsed time: 00:10:26s.  Time for last 1,000,000:    1s.  Last read position: chr12:6,750,277
INFO	2026-06-08 08:59:22	MarkDuplicates	Tracking 457301 as yet unmatched pairs. 43919 records in RAM.
INFO	2026-06-08 08:59:24	MarkDuplicates	Read   316,000,000 records.  Elapsed time: 00:10:28s.  Time for last 1,000,000:    1s.  Last read position: chr12:7,090,073
INFO	2026-06-08 08:59:24	MarkDuplicates	Tracking 455333 as yet unmatched pairs. 41938 records in RAM.
INFO	2026-06-08 08:59:25	MarkDuplicates	Read   317,000,000 records.  Elapsed time: 00:10:29s.  Time for last 1,000,000:    1s.  Last read position: chr12:10,801,730
INFO	2026-06-08 08:59:25	MarkDuplicates	Tracking 452889 as yet unmatched pairs. 39477 records in RAM.
INFO	2026-06-08 08:59:27	MarkDuplicates	Read   318,000,000 records.  Elapsed time: 00:10:31s.  Time for last 1,000,000:    1s.  Last read position: chr12:19,130,054
INFO	2026-06-08 08:59:27	MarkDuplicates	Tracking 451707 as yet unmatched pairs. 38271 records in RAM.
INFO	2026-06-08 08:59:29	MarkDuplicates	Read   319,000,000 records.  Elapsed time: 00:10:33s.  Time for last 1,000,000:    1s.  Last read position: chr12:32,755,656
INFO	2026-06-08 08:59:29	MarkDuplicates	Tracking 449914 as yet unmatched pairs. 36461 records in RAM.
INFO	2026-06-08 08:59:31	MarkDuplicates	Read   320,000,000 records.  Elapsed time: 00:10:35s.  Time for last 1,000,000:    2s.  Last read position: chr12:40,537,659
INFO	2026-06-08 08:59:31	MarkDuplicates	Tracking 448828 as yet unmatched pairs. 35371 records in RAM.
INFO	2026-06-08 08:59:33	MarkDuplicates	Read   321,000,000 records.  Elapsed time: 00:10:37s.  Time for last 1,000,000:    2s.  Last read position: chr12:48,130,420
INFO	2026-06-08 08:59:33	MarkDuplicates	Tracking 447128 as yet unmatched pairs. 33651 records in RAM.
INFO	2026-06-08 08:59:35	MarkDuplicates	Read   322,000,000 records.  Elapsed time: 00:10:39s.  Time for last 1,000,000:    2s.  Last read position: chr12:49,185,122
INFO	2026-06-08 08:59:35	MarkDuplicates	Tracking 446423 as yet unmatched pairs. 32937 records in RAM.
INFO	2026-06-08 08:59:37	MarkDuplicates	Read   323,000,000 records.  Elapsed time: 00:10:41s.  Time for last 1,000,000:    1s.  Last read position: chr12:51,118,623
INFO	2026-06-08 08:59:37	MarkDuplicates	Tracking 443813 as yet unmatched pairs. 30314 records in RAM.
INFO	2026-06-08 08:59:39	MarkDuplicates	Read   324,000,000 records.  Elapsed time: 00:10:42s.  Time for last 1,000,000:    1s.  Last read position: chr12:53,295,585
INFO	2026-06-08 08:59:39	MarkDuplicates	Tracking 443558 as yet unmatched pairs. 30053 records in RAM.
INFO	2026-06-08 08:59:40	MarkDuplicates	Read   325,000,000 records.  Elapsed time: 00:10:44s.  Time for last 1,000,000:    1s.  Last read position: chr12:54,283,811
INFO	2026-06-08 08:59:40	MarkDuplicates	Tracking 441408 as yet unmatched pairs. 27899 records in RAM.
INFO	2026-06-08 08:59:42	MarkDuplicates	Read   326,000,000 records.  Elapsed time: 00:10:46s.  Time for last 1,000,000:    1s.  Last read position: chr12:56,158,377
INFO	2026-06-08 08:59:42	MarkDuplicates	Tracking 439312 as yet unmatched pairs. 25800 records in RAM.
INFO	2026-06-08 08:59:44	MarkDuplicates	Read   327,000,000 records.  Elapsed time: 00:10:47s.  Time for last 1,000,000:    1s.  Last read position: chr12:56,712,879
INFO	2026-06-08 08:59:44	MarkDuplicates	Tracking 439496 as yet unmatched pairs. 25974 records in RAM.
INFO	2026-06-08 08:59:45	MarkDuplicates	Read   328,000,000 records.  Elapsed time: 00:10:49s.  Time for last 1,000,000:    1s.  Last read position: chr12:57,158,622
INFO	2026-06-08 08:59:45	MarkDuplicates	Tracking 436497 as yet unmatched pairs. 22965 records in RAM.
INFO	2026-06-08 08:59:47	MarkDuplicates	Read   329,000,000 records.  Elapsed time: 00:10:51s.  Time for last 1,000,000:    1s.  Last read position: chr12:57,208,076
INFO	2026-06-08 08:59:47	MarkDuplicates	Tracking 434287 as yet unmatched pairs. 20748 records in RAM.
INFO	2026-06-08 08:59:49	MarkDuplicates	Read   330,000,000 records.  Elapsed time: 00:10:53s.  Time for last 1,000,000:    1s.  Last read position: chr12:62,467,213
INFO	2026-06-08 08:59:49	MarkDuplicates	Tracking 432504 as yet unmatched pairs. 18947 records in RAM.
INFO	2026-06-08 08:59:50	MarkDuplicates	Read   331,000,000 records.  Elapsed time: 00:10:54s.  Time for last 1,000,000:    1s.  Last read position: chr12:71,619,935
INFO	2026-06-08 08:59:50	MarkDuplicates	Tracking 430217 as yet unmatched pairs. 16647 records in RAM.
INFO	2026-06-08 08:59:52	MarkDuplicates	Read   332,000,000 records.  Elapsed time: 00:10:56s.  Time for last 1,000,000:    1s.  Last read position: chr12:91,146,118
INFO	2026-06-08 08:59:52	MarkDuplicates	Tracking 430749 as yet unmatched pairs. 17161 records in RAM.
INFO	2026-06-08 08:59:54	MarkDuplicates	Read   333,000,000 records.  Elapsed time: 00:10:57s.  Time for last 1,000,000:    1s.  Last read position: chr12:96,311,083
INFO	2026-06-08 08:59:54	MarkDuplicates	Tracking 426917 as yet unmatched pairs. 13325 records in RAM.
INFO	2026-06-08 08:59:55	MarkDuplicates	Read   334,000,000 records.  Elapsed time: 00:10:59s.  Time for last 1,000,000:    1s.  Last read position: chr12:105,107,772
INFO	2026-06-08 08:59:55	MarkDuplicates	Tracking 425312 as yet unmatched pairs. 11708 records in RAM.
INFO	2026-06-08 08:59:57	MarkDuplicates	Read   335,000,000 records.  Elapsed time: 00:11:01s.  Time for last 1,000,000:    2s.  Last read position: chr12:110,340,705
INFO	2026-06-08 08:59:57	MarkDuplicates	Tracking 424452 as yet unmatched pairs. 10839 records in RAM.
INFO	2026-06-08 08:59:59	MarkDuplicates	Read   336,000,000 records.  Elapsed time: 00:11:03s.  Time for last 1,000,000:    1s.  Last read position: chr12:112,949,033
INFO	2026-06-08 08:59:59	MarkDuplicates	Tracking 422132 as yet unmatched pairs. 8512 records in RAM.
INFO	2026-06-08 09:00:01	MarkDuplicates	Read   337,000,000 records.  Elapsed time: 00:11:05s.  Time for last 1,000,000:    1s.  Last read position: chr12:120,160,160
INFO	2026-06-08 09:00:01	MarkDuplicates	Tracking 419963 as yet unmatched pairs. 6316 records in RAM.
INFO	2026-06-08 09:00:03	MarkDuplicates	Read   338,000,000 records.  Elapsed time: 00:11:07s.  Time for last 1,000,000:    1s.  Last read position: chr12:122,261,358
INFO	2026-06-08 09:00:03	MarkDuplicates	Tracking 418132 as yet unmatched pairs. 4460 records in RAM.
INFO	2026-06-08 09:00:05	MarkDuplicates	Read   339,000,000 records.  Elapsed time: 00:11:09s.  Time for last 1,000,000:    1s.  Last read position: chr12:124,372,491
INFO	2026-06-08 09:00:05	MarkDuplicates	Tracking 416963 as yet unmatched pairs. 3282 records in RAM.
INFO	2026-06-08 09:00:06	MarkDuplicates	Read   340,000,000 records.  Elapsed time: 00:11:10s.  Time for last 1,000,000:    1s.  Last read position: chr12:132,750,672
INFO	2026-06-08 09:00:06	MarkDuplicates	Tracking 414685 as yet unmatched pairs. 996 records in RAM.
INFO	2026-06-08 09:00:08	MarkDuplicates	Read   341,000,000 records.  Elapsed time: 00:11:12s.  Time for last 1,000,000:    1s.  Last read position: chr13:21,413,733
INFO	2026-06-08 09:00:08	MarkDuplicates	Tracking 413295 as yet unmatched pairs. 12780 records in RAM.
INFO	2026-06-08 09:00:10	MarkDuplicates	Read   342,000,000 records.  Elapsed time: 00:11:13s.  Time for last 1,000,000:    1s.  Last read position: chr13:32,536,935
INFO	2026-06-08 09:00:10	MarkDuplicates	Tracking 411528 as yet unmatched pairs. 10992 records in RAM.
INFO	2026-06-08 09:00:11	MarkDuplicates	Read   343,000,000 records.  Elapsed time: 00:11:15s.  Time for last 1,000,000:    1s.  Last read position: chr13:37,586,838
INFO	2026-06-08 09:00:11	MarkDuplicates	Tracking 420926 as yet unmatched pairs. 20375 records in RAM.
INFO	2026-06-08 09:00:13	MarkDuplicates	Read   344,000,000 records.  Elapsed time: 00:11:17s.  Time for last 1,000,000:    1s.  Last read position: chr13:45,338,696
INFO	2026-06-08 09:00:13	MarkDuplicates	Tracking 412587 as yet unmatched pairs. 12019 records in RAM.
INFO	2026-06-08 09:00:15	MarkDuplicates	Read   345,000,000 records.  Elapsed time: 00:11:18s.  Time for last 1,000,000:    1s.  Last read position: chr13:59,572,938
INFO	2026-06-08 09:00:15	MarkDuplicates	Tracking 406265 as yet unmatched pairs. 5670 records in RAM.
INFO	2026-06-08 09:00:16	MarkDuplicates	Read   346,000,000 records.  Elapsed time: 00:11:20s.  Time for last 1,000,000:    1s.  Last read position: chr13:98,395,709
INFO	2026-06-08 09:00:16	MarkDuplicates	Tracking 406277 as yet unmatched pairs. 5677 records in RAM.
INFO	2026-06-08 09:00:18	MarkDuplicates	Read   347,000,000 records.  Elapsed time: 00:11:22s.  Time for last 1,000,000:    1s.  Last read position: chr13:110,213,948
INFO	2026-06-08 09:00:18	MarkDuplicates	Tracking 403508 as yet unmatched pairs. 2901 records in RAM.
INFO	2026-06-08 09:00:20	MarkDuplicates	Read   348,000,000 records.  Elapsed time: 00:11:23s.  Time for last 1,000,000:    1s.  Last read position: chr13:114,324,908
INFO	2026-06-08 09:00:20	MarkDuplicates	Tracking 401117 as yet unmatched pairs. 508 records in RAM.
INFO	2026-06-08 09:00:21	MarkDuplicates	Read   349,000,000 records.  Elapsed time: 00:11:25s.  Time for last 1,000,000:    1s.  Last read position: chr14:22,770,868
INFO	2026-06-08 09:00:21	MarkDuplicates	Tracking 399463 as yet unmatched pairs. 25737 records in RAM.
INFO	2026-06-08 09:00:23	MarkDuplicates	Read   350,000,000 records.  Elapsed time: 00:11:27s.  Time for last 1,000,000:    1s.  Last read position: chr14:23,532,752
INFO	2026-06-08 09:00:23	MarkDuplicates	Tracking 397020 as yet unmatched pairs. 23286 records in RAM.
INFO	2026-06-08 09:00:25	MarkDuplicates	Read   351,000,000 records.  Elapsed time: 00:11:29s.  Time for last 1,000,000:    1s.  Last read position: chr14:24,431,746
INFO	2026-06-08 09:00:25	MarkDuplicates	Tracking 395750 as yet unmatched pairs. 21999 records in RAM.
INFO	2026-06-08 09:00:26	MarkDuplicates	Read   352,000,000 records.  Elapsed time: 00:11:30s.  Time for last 1,000,000:    1s.  Last read position: chr14:37,680,173
INFO	2026-06-08 09:00:26	MarkDuplicates	Tracking 393840 as yet unmatched pairs. 20080 records in RAM.
INFO	2026-06-08 09:00:28	MarkDuplicates	Read   353,000,000 records.  Elapsed time: 00:11:32s.  Time for last 1,000,000:    1s.  Last read position: chr14:51,989,611
INFO	2026-06-08 09:00:28	MarkDuplicates	Tracking 392712 as yet unmatched pairs. 18903 records in RAM.
INFO	2026-06-08 09:00:30	MarkDuplicates	Read   354,000,000 records.  Elapsed time: 00:11:34s.  Time for last 1,000,000:    2s.  Last read position: chr14:60,283,334
INFO	2026-06-08 09:00:30	MarkDuplicates	Tracking 391092 as yet unmatched pairs. 17275 records in RAM.
INFO	2026-06-08 09:00:33	MarkDuplicates	Read   355,000,000 records.  Elapsed time: 00:11:37s.  Time for last 1,000,000:    2s.  Last read position: chr14:67,781,485
INFO	2026-06-08 09:00:33	MarkDuplicates	Tracking 388990 as yet unmatched pairs. 15160 records in RAM.
INFO	2026-06-08 09:00:35	MarkDuplicates	Read   356,000,000 records.  Elapsed time: 00:11:39s.  Time for last 1,000,000:    1s.  Last read position: chr14:73,077,505
INFO	2026-06-08 09:00:35	MarkDuplicates	Tracking 388000 as yet unmatched pairs. 14156 records in RAM.
INFO	2026-06-08 09:00:37	MarkDuplicates	Read   357,000,000 records.  Elapsed time: 00:11:41s.  Time for last 1,000,000:    1s.  Last read position: chr14:74,799,270
INFO	2026-06-08 09:00:37	MarkDuplicates	Tracking 385855 as yet unmatched pairs. 12006 records in RAM.
INFO	2026-06-08 09:00:39	MarkDuplicates	Read   358,000,000 records.  Elapsed time: 00:11:42s.  Time for last 1,000,000:    1s.  Last read position: chr14:88,572,822
INFO	2026-06-08 09:00:39	MarkDuplicates	Tracking 383894 as yet unmatched pairs. 10033 records in RAM.
INFO	2026-06-08 09:00:40	MarkDuplicates	Read   359,000,000 records.  Elapsed time: 00:11:44s.  Time for last 1,000,000:    1s.  Last read position: chr14:94,614,886
INFO	2026-06-08 09:00:40	MarkDuplicates	Tracking 382416 as yet unmatched pairs. 8554 records in RAM.
INFO	2026-06-08 09:00:42	MarkDuplicates	Read   360,000,000 records.  Elapsed time: 00:11:46s.  Time for last 1,000,000:    1s.  Last read position: chr14:101,986,054
INFO	2026-06-08 09:00:42	MarkDuplicates	Tracking 381239 as yet unmatched pairs. 7352 records in RAM.
INFO	2026-06-08 09:00:44	MarkDuplicates	Read   361,000,000 records.  Elapsed time: 00:11:48s.  Time for last 1,000,000:    1s.  Last read position: chr14:103,670,279
INFO	2026-06-08 09:00:44	MarkDuplicates	Tracking 378466 as yet unmatched pairs. 4578 records in RAM.
INFO	2026-06-08 09:00:46	MarkDuplicates	Read   362,000,000 records.  Elapsed time: 00:11:50s.  Time for last 1,000,000:    1s.  Last read position: chr14:105,220,044
INFO	2026-06-08 09:00:46	MarkDuplicates	Tracking 376309 as yet unmatched pairs. 2415 records in RAM.
INFO	2026-06-08 09:00:47	MarkDuplicates	Read   363,000,000 records.  Elapsed time: 00:11:51s.  Time for last 1,000,000:    1s.  Last read position: chr14:105,741,581
INFO	2026-06-08 09:00:47	MarkDuplicates	Tracking 378454 as yet unmatched pairs. 4550 records in RAM.
INFO	2026-06-08 09:00:49	MarkDuplicates	Read   364,000,000 records.  Elapsed time: 00:11:53s.  Time for last 1,000,000:    1s.  Last read position: chr15:25,718,368
INFO	2026-06-08 09:00:49	MarkDuplicates	Tracking 373325 as yet unmatched pairs. 26761 records in RAM.
INFO	2026-06-08 09:00:51	MarkDuplicates	Read   365,000,000 records.  Elapsed time: 00:11:55s.  Time for last 1,000,000:    1s.  Last read position: chr15:34,382,235
INFO	2026-06-08 09:00:51	MarkDuplicates	Tracking 373200 as yet unmatched pairs. 26628 records in RAM.
INFO	2026-06-08 09:00:52	MarkDuplicates	Read   366,000,000 records.  Elapsed time: 00:11:56s.  Time for last 1,000,000:    1s.  Last read position: chr15:40,844,596
INFO	2026-06-08 09:00:52	MarkDuplicates	Tracking 371581 as yet unmatched pairs. 24983 records in RAM.
INFO	2026-06-08 09:00:54	MarkDuplicates	Read   367,000,000 records.  Elapsed time: 00:11:58s.  Time for last 1,000,000:    1s.  Last read position: chr15:42,692,149
INFO	2026-06-08 09:00:54	MarkDuplicates	Tracking 368633 as yet unmatched pairs. 22029 records in RAM.
INFO	2026-06-08 09:00:56	MarkDuplicates	Read   368,000,000 records.  Elapsed time: 00:12:00s.  Time for last 1,000,000:    1s.  Last read position: chr15:44,379,727
INFO	2026-06-08 09:00:56	MarkDuplicates	Tracking 368195 as yet unmatched pairs. 21588 records in RAM.
INFO	2026-06-08 09:00:57	MarkDuplicates	Read   369,000,000 records.  Elapsed time: 00:12:01s.  Time for last 1,000,000:    1s.  Last read position: chr15:48,497,279
INFO	2026-06-08 09:00:57	MarkDuplicates	Tracking 367420 as yet unmatched pairs. 20805 records in RAM.
INFO	2026-06-08 09:00:59	MarkDuplicates	Read   370,000,000 records.  Elapsed time: 00:12:03s.  Time for last 1,000,000:    1s.  Last read position: chr15:55,862,922
INFO	2026-06-08 09:00:59	MarkDuplicates	Tracking 363835 as yet unmatched pairs. 17208 records in RAM.
INFO	2026-06-08 09:01:01	MarkDuplicates	Read   371,000,000 records.  Elapsed time: 00:12:05s.  Time for last 1,000,000:    2s.  Last read position: chr15:61,940,787
INFO	2026-06-08 09:01:01	MarkDuplicates	Tracking 362551 as yet unmatched pairs. 15901 records in RAM.
INFO	2026-06-08 09:01:04	MarkDuplicates	Read   372,000,000 records.  Elapsed time: 00:12:08s.  Time for last 1,000,000:    2s.  Last read position: chr15:64,861,534
INFO	2026-06-08 09:01:04	MarkDuplicates	Tracking 360998 as yet unmatched pairs. 14340 records in RAM.
INFO	2026-06-08 09:01:06	MarkDuplicates	Read   373,000,000 records.  Elapsed time: 00:12:10s.  Time for last 1,000,000:    1s.  Last read position: chr15:66,326,145
INFO	2026-06-08 09:01:06	MarkDuplicates	Tracking 358982 as yet unmatched pairs. 12324 records in RAM.
INFO	2026-06-08 09:01:08	MarkDuplicates	Read   374,000,000 records.  Elapsed time: 00:12:11s.  Time for last 1,000,000:    1s.  Last read position: chr15:71,852,171
INFO	2026-06-08 09:01:08	MarkDuplicates	Tracking 357010 as yet unmatched pairs. 10344 records in RAM.
INFO	2026-06-08 09:01:09	MarkDuplicates	Read   375,000,000 records.  Elapsed time: 00:12:13s.  Time for last 1,000,000:    1s.  Last read position: chr15:74,033,371
INFO	2026-06-08 09:01:09	MarkDuplicates	Tracking 359252 as yet unmatched pairs. 12582 records in RAM.
INFO	2026-06-08 09:01:11	MarkDuplicates	Read   376,000,000 records.  Elapsed time: 00:12:15s.  Time for last 1,000,000:    1s.  Last read position: chr15:76,216,588
INFO	2026-06-08 09:01:11	MarkDuplicates	Tracking 353138 as yet unmatched pairs. 6460 records in RAM.
INFO	2026-06-08 09:01:12	MarkDuplicates	Read   377,000,000 records.  Elapsed time: 00:12:16s.  Time for last 1,000,000:    1s.  Last read position: chr15:82,539,995
INFO	2026-06-08 09:01:12	MarkDuplicates	Tracking 351273 as yet unmatched pairs. 4572 records in RAM.
INFO	2026-06-08 09:01:14	MarkDuplicates	Read   378,000,000 records.  Elapsed time: 00:12:18s.  Time for last 1,000,000:    1s.  Last read position: chr15:89,201,156
INFO	2026-06-08 09:01:14	MarkDuplicates	Tracking 349973 as yet unmatched pairs. 3253 records in RAM.
INFO	2026-06-08 09:01:16	MarkDuplicates	Read   379,000,000 records.  Elapsed time: 00:12:19s.  Time for last 1,000,000:    1s.  Last read position: chr15:92,956,493
INFO	2026-06-08 09:01:16	MarkDuplicates	Tracking 348196 as yet unmatched pairs. 1470 records in RAM.
INFO	2026-06-08 09:01:18	MarkDuplicates	Read   380,000,000 records.  Elapsed time: 00:12:21s.  Time for last 1,000,000:    2s.  Last read position: chr16:399,404
INFO	2026-06-08 09:01:18	MarkDuplicates	Tracking 347041 as yet unmatched pairs. 41627 records in RAM.
INFO	2026-06-08 09:01:19	MarkDuplicates	Read   381,000,000 records.  Elapsed time: 00:12:23s.  Time for last 1,000,000:    1s.  Last read position: chr16:1,500,672
INFO	2026-06-08 09:01:19	MarkDuplicates	Tracking 344222 as yet unmatched pairs. 38795 records in RAM.
INFO	2026-06-08 09:01:21	MarkDuplicates	Read   382,000,000 records.  Elapsed time: 00:12:25s.  Time for last 1,000,000:    1s.  Last read position: chr16:2,109,356
INFO	2026-06-08 09:01:21	MarkDuplicates	Tracking 342372 as yet unmatched pairs. 36938 records in RAM.
INFO	2026-06-08 09:01:23	MarkDuplicates	Read   383,000,000 records.  Elapsed time: 00:12:26s.  Time for last 1,000,000:    1s.  Last read position: chr16:2,763,674
INFO	2026-06-08 09:01:23	MarkDuplicates	Tracking 341684 as yet unmatched pairs. 36236 records in RAM.
INFO	2026-06-08 09:01:24	MarkDuplicates	Read   384,000,000 records.  Elapsed time: 00:12:28s.  Time for last 1,000,000:    1s.  Last read position: chr16:3,476,226
INFO	2026-06-08 09:01:24	MarkDuplicates	Tracking 338503 as yet unmatched pairs. 33046 records in RAM.
INFO	2026-06-08 09:01:26	MarkDuplicates	Read   385,000,000 records.  Elapsed time: 00:12:30s.  Time for last 1,000,000:    1s.  Last read position: chr16:8,764,744
INFO	2026-06-08 09:01:26	MarkDuplicates	Tracking 336131 as yet unmatched pairs. 30669 records in RAM.
INFO	2026-06-08 09:01:27	MarkDuplicates	Read   386,000,000 records.  Elapsed time: 00:12:31s.  Time for last 1,000,000:    1s.  Last read position: chr16:14,764,975
INFO	2026-06-08 09:01:27	MarkDuplicates	Tracking 334493 as yet unmatched pairs. 29021 records in RAM.
INFO	2026-06-08 09:01:29	MarkDuplicates	Read   387,000,000 records.  Elapsed time: 00:12:33s.  Time for last 1,000,000:    1s.  Last read position: chr16:15,617,300
INFO	2026-06-08 09:01:29	MarkDuplicates	Tracking 333586 as yet unmatched pairs. 28107 records in RAM.
INFO	2026-06-08 09:01:30	MarkDuplicates	Read   388,000,000 records.  Elapsed time: 00:12:34s.  Time for last 1,000,000:    1s.  Last read position: chr16:16,366,440
INFO	2026-06-08 09:01:30	MarkDuplicates	Tracking 333240 as yet unmatched pairs. 27761 records in RAM.
INFO	2026-06-08 09:01:31	MarkDuplicates	Read   389,000,000 records.  Elapsed time: 00:12:35s.  Time for last 1,000,000:    1s.  Last read position: chr16:18,395,025
INFO	2026-06-08 09:01:31	MarkDuplicates	Tracking 331764 as yet unmatched pairs. 26283 records in RAM.
INFO	2026-06-08 09:01:33	MarkDuplicates	Read   390,000,000 records.  Elapsed time: 00:12:37s.  Time for last 1,000,000:    1s.  Last read position: chr16:21,402,420
INFO	2026-06-08 09:01:33	MarkDuplicates	Tracking 330064 as yet unmatched pairs. 24578 records in RAM.
INFO	2026-06-08 09:01:35	MarkDuplicates	Read   391,000,000 records.  Elapsed time: 00:12:38s.  Time for last 1,000,000:    1s.  Last read position: chr16:21,843,473
INFO	2026-06-08 09:01:35	MarkDuplicates	Tracking 331101 as yet unmatched pairs. 25609 records in RAM.
INFO	2026-06-08 09:01:36	MarkDuplicates	Read   392,000,000 records.  Elapsed time: 00:12:40s.  Time for last 1,000,000:    1s.  Last read position: chr16:22,535,943
INFO	2026-06-08 09:01:36	MarkDuplicates	Tracking 328954 as yet unmatched pairs. 23455 records in RAM.
INFO	2026-06-08 09:01:37	MarkDuplicates	Read   393,000,000 records.  Elapsed time: 00:12:41s.  Time for last 1,000,000:    1s.  Last read position: chr16:28,538,049
INFO	2026-06-08 09:01:37	MarkDuplicates	Tracking 328929 as yet unmatched pairs. 23420 records in RAM.
INFO	2026-06-08 09:01:39	MarkDuplicates	Read   394,000,000 records.  Elapsed time: 00:12:43s.  Time for last 1,000,000:    1s.  Last read position: chr16:29,483,936
INFO	2026-06-08 09:01:39	MarkDuplicates	Tracking 328063 as yet unmatched pairs. 22544 records in RAM.
INFO	2026-06-08 09:01:40	MarkDuplicates	Read   395,000,000 records.  Elapsed time: 00:12:44s.  Time for last 1,000,000:    1s.  Last read position: chr16:30,068,958
INFO	2026-06-08 09:01:40	MarkDuplicates	Tracking 327312 as yet unmatched pairs. 21789 records in RAM.
INFO	2026-06-08 09:01:42	MarkDuplicates	Read   396,000,000 records.  Elapsed time: 00:12:46s.  Time for last 1,000,000:    1s.  Last read position: chr16:30,660,390
INFO	2026-06-08 09:01:42	MarkDuplicates	Tracking 323761 as yet unmatched pairs. 18225 records in RAM.
INFO	2026-06-08 09:01:44	MarkDuplicates	Read   397,000,000 records.  Elapsed time: 00:12:47s.  Time for last 1,000,000:    1s.  Last read position: chr16:31,183,881
INFO	2026-06-08 09:01:44	MarkDuplicates	Tracking 328310 as yet unmatched pairs. 22771 records in RAM.
INFO	2026-06-08 09:01:46	MarkDuplicates	Read   398,000,000 records.  Elapsed time: 00:12:50s.  Time for last 1,000,000:    2s.  Last read position: chr16:49,637,136
INFO	2026-06-08 09:01:46	MarkDuplicates	Tracking 320181 as yet unmatched pairs. 14638 records in RAM.
INFO	2026-06-08 09:01:48	MarkDuplicates	Read   399,000,000 records.  Elapsed time: 00:12:52s.  Time for last 1,000,000:    2s.  Last read position: chr16:55,810,612
INFO	2026-06-08 09:01:48	MarkDuplicates	Tracking 318063 as yet unmatched pairs. 12512 records in RAM.
INFO	2026-06-08 09:01:50	MarkDuplicates	Read   400,000,000 records.  Elapsed time: 00:12:54s.  Time for last 1,000,000:    1s.  Last read position: chr16:65,004,646
INFO	2026-06-08 09:01:50	MarkDuplicates	Tracking 317884 as yet unmatched pairs. 12332 records in RAM.
INFO	2026-06-08 09:01:52	MarkDuplicates	Read   401,000,000 records.  Elapsed time: 00:12:55s.  Time for last 1,000,000:    1s.  Last read position: chr16:68,191,109
INFO	2026-06-08 09:01:52	MarkDuplicates	Tracking 314403 as yet unmatched pairs. 8847 records in RAM.
INFO	2026-06-08 09:01:53	MarkDuplicates	Read   402,000,000 records.  Elapsed time: 00:12:57s.  Time for last 1,000,000:    1s.  Last read position: chr16:71,748,267
INFO	2026-06-08 09:01:53	MarkDuplicates	Tracking 312708 as yet unmatched pairs. 7140 records in RAM.
INFO	2026-06-08 09:01:55	MarkDuplicates	Read   403,000,000 records.  Elapsed time: 00:12:59s.  Time for last 1,000,000:    1s.  Last read position: chr16:83,915,056
INFO	2026-06-08 09:01:55	MarkDuplicates	Tracking 310390 as yet unmatched pairs. 4802 records in RAM.
INFO	2026-06-08 09:01:56	MarkDuplicates	Read   404,000,000 records.  Elapsed time: 00:13:00s.  Time for last 1,000,000:    1s.  Last read position: chr16:88,433,505
INFO	2026-06-08 09:01:56	MarkDuplicates	Tracking 308969 as yet unmatched pairs. 3372 records in RAM.
INFO	2026-06-08 09:01:58	MarkDuplicates	Read   405,000,000 records.  Elapsed time: 00:13:02s.  Time for last 1,000,000:    1s.  Last read position: chr16:89,561,650
INFO	2026-06-08 09:01:58	MarkDuplicates	Tracking 311889 as yet unmatched pairs. 6292 records in RAM.
INFO	2026-06-08 09:02:01	MarkDuplicates	Read   406,000,000 records.  Elapsed time: 00:13:05s.  Time for last 1,000,000:    2s.  Last read position: chr17:1,472,145
INFO	2026-06-08 09:02:01	MarkDuplicates	Tracking 305744 as yet unmatched pairs. 148057 records in RAM.
INFO	2026-06-08 09:02:03	MarkDuplicates	Read   407,000,000 records.  Elapsed time: 00:13:07s.  Time for last 1,000,000:    1s.  Last read position: chr17:2,379,162
INFO	2026-06-08 09:02:03	MarkDuplicates	Tracking 303101 as yet unmatched pairs. 145401 records in RAM.
INFO	2026-06-08 09:02:05	MarkDuplicates	Read   408,000,000 records.  Elapsed time: 00:13:08s.  Time for last 1,000,000:    1s.  Last read position: chr17:4,945,862
INFO	2026-06-08 09:02:05	MarkDuplicates	Tracking 302404 as yet unmatched pairs. 144704 records in RAM.
INFO	2026-06-08 09:02:07	MarkDuplicates	Read   409,000,000 records.  Elapsed time: 00:13:11s.  Time for last 1,000,000:    2s.  Last read position: chr17:7,311,060
INFO	2026-06-08 09:02:07	MarkDuplicates	Tracking 300937 as yet unmatched pairs. 143231 records in RAM.
INFO	2026-06-08 09:02:09	MarkDuplicates	Read   410,000,000 records.  Elapsed time: 00:13:13s.  Time for last 1,000,000:    2s.  Last read position: chr17:7,797,698
INFO	2026-06-08 09:02:09	MarkDuplicates	Tracking 297137 as yet unmatched pairs. 139415 records in RAM.
INFO	2026-06-08 09:02:12	MarkDuplicates	Read   411,000,000 records.  Elapsed time: 00:13:15s.  Time for last 1,000,000:    2s.  Last read position: chr17:10,543,692
INFO	2026-06-08 09:02:12	MarkDuplicates	Tracking 295400 as yet unmatched pairs. 137675 records in RAM.
INFO	2026-06-08 09:02:13	MarkDuplicates	Read   412,000,000 records.  Elapsed time: 00:13:17s.  Time for last 1,000,000:    1s.  Last read position: chr17:17,793,344
INFO	2026-06-08 09:02:13	MarkDuplicates	Tracking 294179 as yet unmatched pairs. 136452 records in RAM.
INFO	2026-06-08 09:02:15	MarkDuplicates	Read   413,000,000 records.  Elapsed time: 00:13:19s.  Time for last 1,000,000:    1s.  Last read position: chr17:19,546,486
INFO	2026-06-08 09:02:15	MarkDuplicates	Tracking 291916 as yet unmatched pairs. 134189 records in RAM.
INFO	2026-06-08 09:02:16	MarkDuplicates	Read   414,000,000 records.  Elapsed time: 00:13:20s.  Time for last 1,000,000:    1s.  Last read position: chr17:28,759,840
INFO	2026-06-08 09:02:16	MarkDuplicates	Tracking 290529 as yet unmatched pairs. 132799 records in RAM.
INFO	2026-06-08 09:02:18	MarkDuplicates	Read   415,000,000 records.  Elapsed time: 00:13:22s.  Time for last 1,000,000:    1s.  Last read position: chr17:32,350,317
INFO	2026-06-08 09:02:18	MarkDuplicates	Tracking 289772 as yet unmatched pairs. 132036 records in RAM.
INFO	2026-06-08 09:02:20	MarkDuplicates	Read   416,000,000 records.  Elapsed time: 00:13:24s.  Time for last 1,000,000:    1s.  Last read position: chr17:36,986,634
INFO	2026-06-08 09:02:20	MarkDuplicates	Tracking 287070 as yet unmatched pairs. 129334 records in RAM.
INFO	2026-06-08 09:02:22	MarkDuplicates	Read   417,000,000 records.  Elapsed time: 00:13:25s.  Time for last 1,000,000:    1s.  Last read position: chr17:39,069,870
INFO	2026-06-08 09:02:22	MarkDuplicates	Tracking 285827 as yet unmatched pairs. 128082 records in RAM.
INFO	2026-06-08 09:02:23	MarkDuplicates	Read   418,000,000 records.  Elapsed time: 00:13:27s.  Time for last 1,000,000:    1s.  Last read position: chr17:39,716,254
INFO	2026-06-08 09:02:23	MarkDuplicates	Tracking 290559 as yet unmatched pairs. 132813 records in RAM.
INFO	2026-06-08 09:02:25	MarkDuplicates	Read   419,000,000 records.  Elapsed time: 00:13:29s.  Time for last 1,000,000:    2s.  Last read position: chr17:40,140,769
INFO	2026-06-08 09:02:25	MarkDuplicates	Tracking 281961 as yet unmatched pairs. 124212 records in RAM.
INFO	2026-06-08 09:02:28	MarkDuplicates	Read   420,000,000 records.  Elapsed time: 00:13:31s.  Time for last 1,000,000:    2s.  Last read position: chr17:41,892,395
INFO	2026-06-08 09:02:28	MarkDuplicates	Tracking 280801 as yet unmatched pairs. 123051 records in RAM.
INFO	2026-06-08 09:02:29	MarkDuplicates	Read   421,000,000 records.  Elapsed time: 00:13:33s.  Time for last 1,000,000:    1s.  Last read position: chr17:42,724,402
INFO	2026-06-08 09:02:29	MarkDuplicates	Tracking 278562 as yet unmatched pairs. 120812 records in RAM.
INFO	2026-06-08 09:02:31	MarkDuplicates	Read   422,000,000 records.  Elapsed time: 00:13:35s.  Time for last 1,000,000:    1s.  Last read position: chr17:44,474,839
INFO	2026-06-08 09:02:31	MarkDuplicates	Tracking 275994 as yet unmatched pairs. 118241 records in RAM.
INFO	2026-06-08 09:02:33	MarkDuplicates	Read   423,000,000 records.  Elapsed time: 00:13:37s.  Time for last 1,000,000:    1s.  Last read position: chr17:46,721,883
INFO	2026-06-08 09:02:33	MarkDuplicates	Tracking 274888 as yet unmatched pairs. 117135 records in RAM.
INFO	2026-06-08 09:02:34	MarkDuplicates	Read   424,000,000 records.  Elapsed time: 00:13:38s.  Time for last 1,000,000:    1s.  Last read position: chr17:50,075,514
INFO	2026-06-08 09:02:34	MarkDuplicates	Tracking 273071 as yet unmatched pairs. 115312 records in RAM.
INFO	2026-06-08 09:02:36	MarkDuplicates	Read   425,000,000 records.  Elapsed time: 00:13:40s.  Time for last 1,000,000:    1s.  Last read position: chr17:50,185,807
INFO	2026-06-08 09:02:36	MarkDuplicates	Tracking 302182 as yet unmatched pairs. 144419 records in RAM.
INFO	2026-06-08 09:02:38	MarkDuplicates	Read   426,000,000 records.  Elapsed time: 00:13:42s.  Time for last 1,000,000:    1s.  Last read position: chr17:50,186,370
INFO	2026-06-08 09:02:38	MarkDuplicates	Tracking 344659 as yet unmatched pairs. 186890 records in RAM.
INFO	2026-06-08 09:02:40	MarkDuplicates	Read   427,000,000 records.  Elapsed time: 00:13:44s.  Time for last 1,000,000:    1s.  Last read position: chr17:50,186,756
INFO	2026-06-08 09:02:40	MarkDuplicates	Tracking 310285 as yet unmatched pairs. 152515 records in RAM.
INFO	2026-06-08 09:02:42	MarkDuplicates	Read   428,000,000 records.  Elapsed time: 00:13:46s.  Time for last 1,000,000:    1s.  Last read position: chr17:50,187,014
INFO	2026-06-08 09:02:42	MarkDuplicates	Tracking 468702 as yet unmatched pairs. 310932 records in RAM.
INFO	2026-06-08 09:02:44	MarkDuplicates	Read   429,000,000 records.  Elapsed time: 00:13:48s.  Time for last 1,000,000:    1s.  Last read position: chr17:50,187,103
INFO	2026-06-08 09:02:44	MarkDuplicates	Tracking 496227 as yet unmatched pairs. 338457 records in RAM.
INFO	2026-06-08 09:02:46	MarkDuplicates	Read   430,000,000 records.  Elapsed time: 00:13:50s.  Time for last 1,000,000:    2s.  Last read position: chr17:50,187,882
INFO	2026-06-08 09:02:46	MarkDuplicates	Tracking 540876 as yet unmatched pairs. 383105 records in RAM.
INFO	2026-06-08 09:02:49	MarkDuplicates	Read   431,000,000 records.  Elapsed time: 00:13:52s.  Time for last 1,000,000:    2s.  Last read position: chr17:50,187,948
INFO	2026-06-08 09:02:49	MarkDuplicates	Tracking 530716 as yet unmatched pairs. 372938 records in RAM.
INFO	2026-06-08 09:02:50	MarkDuplicates	Read   432,000,000 records.  Elapsed time: 00:13:54s.  Time for last 1,000,000:    1s.  Last read position: chr17:50,188,109
INFO	2026-06-08 09:02:50	MarkDuplicates	Tracking 535647 as yet unmatched pairs. 377869 records in RAM.
INFO	2026-06-08 09:02:52	MarkDuplicates	Read   433,000,000 records.  Elapsed time: 00:13:56s.  Time for last 1,000,000:    1s.  Last read position: chr17:50,188,576
INFO	2026-06-08 09:02:52	MarkDuplicates	Tracking 462035 as yet unmatched pairs. 304254 records in RAM.
INFO	2026-06-08 09:02:54	MarkDuplicates	Read   434,000,000 records.  Elapsed time: 00:13:58s.  Time for last 1,000,000:    1s.  Last read position: chr17:50,188,771
INFO	2026-06-08 09:02:54	MarkDuplicates	Tracking 488730 as yet unmatched pairs. 330949 records in RAM.
INFO	2026-06-08 09:02:56	MarkDuplicates	Read   435,000,000 records.  Elapsed time: 00:14:00s.  Time for last 1,000,000:    1s.  Last read position: chr17:50,188,952
INFO	2026-06-08 09:02:56	MarkDuplicates	Tracking 457371 as yet unmatched pairs. 299585 records in RAM.
INFO	2026-06-08 09:02:58	MarkDuplicates	Read   436,000,000 records.  Elapsed time: 00:14:02s.  Time for last 1,000,000:    1s.  Last read position: chr17:50,189,220
INFO	2026-06-08 09:02:58	MarkDuplicates	Tracking 410450 as yet unmatched pairs. 252664 records in RAM.
INFO	2026-06-08 09:03:00	MarkDuplicates	Read   437,000,000 records.  Elapsed time: 00:14:03s.  Time for last 1,000,000:    1s.  Last read position: chr17:50,189,427
INFO	2026-06-08 09:03:00	MarkDuplicates	Tracking 426460 as yet unmatched pairs. 268673 records in RAM.
INFO	2026-06-08 09:03:01	MarkDuplicates	Read   438,000,000 records.  Elapsed time: 00:14:05s.  Time for last 1,000,000:    1s.  Last read position: chr17:50,189,518
INFO	2026-06-08 09:03:01	MarkDuplicates	Tracking 467377 as yet unmatched pairs. 309587 records in RAM.
INFO	2026-06-08 09:03:03	MarkDuplicates	Read   439,000,000 records.  Elapsed time: 00:14:07s.  Time for last 1,000,000:    1s.  Last read position: chr17:50,189,858
INFO	2026-06-08 09:03:03	MarkDuplicates	Tracking 509139 as yet unmatched pairs. 351341 records in RAM.
INFO	2026-06-08 09:03:05	MarkDuplicates	Read   440,000,000 records.  Elapsed time: 00:14:09s.  Time for last 1,000,000:    1s.  Last read position: chr17:50,190,011
INFO	2026-06-08 09:03:05	MarkDuplicates	Tracking 498321 as yet unmatched pairs. 340519 records in RAM.
INFO	2026-06-08 09:03:08	MarkDuplicates	Read   441,000,000 records.  Elapsed time: 00:14:11s.  Time for last 1,000,000:    2s.  Last read position: chr17:50,190,086
INFO	2026-06-08 09:03:08	MarkDuplicates	Tracking 517594 as yet unmatched pairs. 359790 records in RAM.
INFO	2026-06-08 09:03:10	MarkDuplicates	Read   442,000,000 records.  Elapsed time: 00:14:14s.  Time for last 1,000,000:    2s.  Last read position: chr17:50,190,361
INFO	2026-06-08 09:03:10	MarkDuplicates	Tracking 489880 as yet unmatched pairs. 332074 records in RAM.
INFO	2026-06-08 09:03:12	MarkDuplicates	Read   443,000,000 records.  Elapsed time: 00:14:16s.  Time for last 1,000,000:    1s.  Last read position: chr17:50,190,845
INFO	2026-06-08 09:03:12	MarkDuplicates	Tracking 352338 as yet unmatched pairs. 194529 records in RAM.
INFO	2026-06-08 09:03:14	MarkDuplicates	Read   444,000,000 records.  Elapsed time: 00:14:17s.  Time for last 1,000,000:    1s.  Last read position: chr17:50,191,386
INFO	2026-06-08 09:03:14	MarkDuplicates	Tracking 478154 as yet unmatched pairs. 320342 records in RAM.
INFO	2026-06-08 09:03:15	MarkDuplicates	Read   445,000,000 records.  Elapsed time: 00:14:19s.  Time for last 1,000,000:    1s.  Last read position: chr17:50,191,788
INFO	2026-06-08 09:03:16	MarkDuplicates	Tracking 453806 as yet unmatched pairs. 295992 records in RAM.
INFO	2026-06-08 09:03:17	MarkDuplicates	Read   446,000,000 records.  Elapsed time: 00:14:21s.  Time for last 1,000,000:    1s.  Last read position: chr17:50,191,865
INFO	2026-06-08 09:03:17	MarkDuplicates	Tracking 513076 as yet unmatched pairs. 355255 records in RAM.
INFO	2026-06-08 09:03:19	MarkDuplicates	Read   447,000,000 records.  Elapsed time: 00:14:23s.  Time for last 1,000,000:    1s.  Last read position: chr17:50,192,490
INFO	2026-06-08 09:03:19	MarkDuplicates	Tracking 452562 as yet unmatched pairs. 294735 records in RAM.
INFO	2026-06-08 09:03:21	MarkDuplicates	Read   448,000,000 records.  Elapsed time: 00:14:25s.  Time for last 1,000,000:    1s.  Last read position: chr17:50,192,664
INFO	2026-06-08 09:03:21	MarkDuplicates	Tracking 525386 as yet unmatched pairs. 367559 records in RAM.
INFO	2026-06-08 09:03:23	MarkDuplicates	Read   449,000,000 records.  Elapsed time: 00:14:27s.  Time for last 1,000,000:    1s.  Last read position: chr17:50,192,830
INFO	2026-06-08 09:03:23	MarkDuplicates	Tracking 507268 as yet unmatched pairs. 349439 records in RAM.
INFO	2026-06-08 09:03:25	MarkDuplicates	Read   450,000,000 records.  Elapsed time: 00:14:29s.  Time for last 1,000,000:    1s.  Last read position: chr17:50,193,023
INFO	2026-06-08 09:03:25	MarkDuplicates	Tracking 522357 as yet unmatched pairs. 364526 records in RAM.
INFO	2026-06-08 09:03:27	MarkDuplicates	Read   451,000,000 records.  Elapsed time: 00:14:31s.  Time for last 1,000,000:    2s.  Last read position: chr17:50,193,976
INFO	2026-06-08 09:03:27	MarkDuplicates	Tracking 506728 as yet unmatched pairs. 348897 records in RAM.
INFO	2026-06-08 09:03:29	MarkDuplicates	Read   452,000,000 records.  Elapsed time: 00:14:33s.  Time for last 1,000,000:    2s.  Last read position: chr17:50,194,129
INFO	2026-06-08 09:03:29	MarkDuplicates	Tracking 532544 as yet unmatched pairs. 374713 records in RAM.
INFO	2026-06-08 09:03:31	MarkDuplicates	Read   453,000,000 records.  Elapsed time: 00:14:35s.  Time for last 1,000,000:    1s.  Last read position: chr17:50,194,354
INFO	2026-06-08 09:03:31	MarkDuplicates	Tracking 486766 as yet unmatched pairs. 328933 records in RAM.
INFO	2026-06-08 09:03:33	MarkDuplicates	Read   454,000,000 records.  Elapsed time: 00:14:37s.  Time for last 1,000,000:    1s.  Last read position: chr17:50,194,419
INFO	2026-06-08 09:03:33	MarkDuplicates	Tracking 461626 as yet unmatched pairs. 303787 records in RAM.
INFO	2026-06-08 09:03:35	MarkDuplicates	Read   455,000,000 records.  Elapsed time: 00:14:39s.  Time for last 1,000,000:    1s.  Last read position: chr17:50,194,618
INFO	2026-06-08 09:03:35	MarkDuplicates	Tracking 418718 as yet unmatched pairs. 260875 records in RAM.
INFO	2026-06-08 09:03:37	MarkDuplicates	Read   456,000,000 records.  Elapsed time: 00:14:41s.  Time for last 1,000,000:    1s.  Last read position: chr17:50,194,783
INFO	2026-06-08 09:03:37	MarkDuplicates	Tracking 467400 as yet unmatched pairs. 309556 records in RAM.
INFO	2026-06-08 09:03:39	MarkDuplicates	Read   457,000,000 records.  Elapsed time: 00:14:43s.  Time for last 1,000,000:    1s.  Last read position: chr17:50,195,084
INFO	2026-06-08 09:03:39	MarkDuplicates	Tracking 475110 as yet unmatched pairs. 317262 records in RAM.
INFO	2026-06-08 09:03:41	MarkDuplicates	Read   458,000,000 records.  Elapsed time: 00:14:45s.  Time for last 1,000,000:    1s.  Last read position: chr17:50,195,289
INFO	2026-06-08 09:03:41	MarkDuplicates	Tracking 511681 as yet unmatched pairs. 353828 records in RAM.
INFO	2026-06-08 09:03:43	MarkDuplicates	Read   459,000,000 records.  Elapsed time: 00:14:46s.  Time for last 1,000,000:    1s.  Last read position: chr17:50,195,563
INFO	2026-06-08 09:03:43	MarkDuplicates	Tracking 425788 as yet unmatched pairs. 267932 records in RAM.
INFO	2026-06-08 09:03:45	MarkDuplicates	Read   460,000,000 records.  Elapsed time: 00:14:48s.  Time for last 1,000,000:    1s.  Last read position: chr17:50,195,614
INFO	2026-06-08 09:03:45	MarkDuplicates	Tracking 523524 as yet unmatched pairs. 365668 records in RAM.
INFO	2026-06-08 09:03:47	MarkDuplicates	Read   461,000,000 records.  Elapsed time: 00:14:51s.  Time for last 1,000,000:    2s.  Last read position: chr17:50,195,965
INFO	2026-06-08 09:03:47	MarkDuplicates	Tracking 433221 as yet unmatched pairs. 275365 records in RAM.
INFO	2026-06-08 09:03:49	MarkDuplicates	Read   462,000,000 records.  Elapsed time: 00:14:53s.  Time for last 1,000,000:    2s.  Last read position: chr17:50,196,180
INFO	2026-06-08 09:03:49	MarkDuplicates	Tracking 472054 as yet unmatched pairs. 314193 records in RAM.
INFO	2026-06-08 09:03:51	MarkDuplicates	Read   463,000,000 records.  Elapsed time: 00:14:55s.  Time for last 1,000,000:    1s.  Last read position: chr17:50,196,337
INFO	2026-06-08 09:03:51	MarkDuplicates	Tracking 463618 as yet unmatched pairs. 305747 records in RAM.
INFO	2026-06-08 09:03:53	MarkDuplicates	Read   464,000,000 records.  Elapsed time: 00:14:57s.  Time for last 1,000,000:    1s.  Last read position: chr17:50,196,515
INFO	2026-06-08 09:03:53	MarkDuplicates	Tracking 484887 as yet unmatched pairs. 327013 records in RAM.
INFO	2026-06-08 09:03:55	MarkDuplicates	Read   465,000,000 records.  Elapsed time: 00:14:58s.  Time for last 1,000,000:    1s.  Last read position: chr17:50,197,015
INFO	2026-06-08 09:03:55	MarkDuplicates	Tracking 513383 as yet unmatched pairs. 355508 records in RAM.
INFO	2026-06-08 09:03:57	MarkDuplicates	Read   466,000,000 records.  Elapsed time: 00:15:00s.  Time for last 1,000,000:    2s.  Last read position: chr17:50,197,205
INFO	2026-06-08 09:03:57	MarkDuplicates	Tracking 508667 as yet unmatched pairs. 350787 records in RAM.
INFO	2026-06-08 09:03:58	MarkDuplicates	Read   467,000,000 records.  Elapsed time: 00:15:02s.  Time for last 1,000,000:    1s.  Last read position: chr17:50,197,751
INFO	2026-06-08 09:03:58	MarkDuplicates	Tracking 455287 as yet unmatched pairs. 297405 records in RAM.
INFO	2026-06-08 09:04:00	MarkDuplicates	Read   468,000,000 records.  Elapsed time: 00:15:04s.  Time for last 1,000,000:    2s.  Last read position: chr17:50,198,163
INFO	2026-06-08 09:04:00	MarkDuplicates	Tracking 331465 as yet unmatched pairs. 173579 records in RAM.
INFO	2026-06-08 09:04:02	MarkDuplicates	Read   469,000,000 records.  Elapsed time: 00:15:06s.  Time for last 1,000,000:    1s.  Last read position: chr17:50,198,470
INFO	2026-06-08 09:04:02	MarkDuplicates	Tracking 407738 as yet unmatched pairs. 249849 records in RAM.
INFO	2026-06-08 09:04:04	MarkDuplicates	Read   470,000,000 records.  Elapsed time: 00:15:08s.  Time for last 1,000,000:    1s.  Last read position: chr17:50,199,269
INFO	2026-06-08 09:04:04	MarkDuplicates	Tracking 360291 as yet unmatched pairs. 202400 records in RAM.
INFO	2026-06-08 09:04:06	MarkDuplicates	Read   471,000,000 records.  Elapsed time: 00:15:10s.  Time for last 1,000,000:    1s.  Last read position: chr17:50,199,555
INFO	2026-06-08 09:04:06	MarkDuplicates	Tracking 282022 as yet unmatched pairs. 124131 records in RAM.
INFO	2026-06-08 09:04:08	MarkDuplicates	Read   472,000,000 records.  Elapsed time: 00:15:11s.  Time for last 1,000,000:    1s.  Last read position: chr17:50,199,829
INFO	2026-06-08 09:04:08	MarkDuplicates	Tracking 253917 as yet unmatched pairs. 96025 records in RAM.
INFO	2026-06-08 09:04:09	MarkDuplicates	Read   473,000,000 records.  Elapsed time: 00:15:13s.  Time for last 1,000,000:    1s.  Last read position: chr17:50,552,161
INFO	2026-06-08 09:04:09	MarkDuplicates	Tracking 179151 as yet unmatched pairs. 21256 records in RAM.
INFO	2026-06-08 09:04:11	MarkDuplicates	Read   474,000,000 records.  Elapsed time: 00:15:15s.  Time for last 1,000,000:    1s.  Last read position: chr17:59,648,315
INFO	2026-06-08 09:04:11	MarkDuplicates	Tracking 179207 as yet unmatched pairs. 21305 records in RAM.
INFO	2026-06-08 09:04:13	MarkDuplicates	Read   475,000,000 records.  Elapsed time: 00:15:16s.  Time for last 1,000,000:    1s.  Last read position: chr17:61,987,033
INFO	2026-06-08 09:04:13	MarkDuplicates	Tracking 175661 as yet unmatched pairs. 17739 records in RAM.
INFO	2026-06-08 09:04:15	MarkDuplicates	Read   476,000,000 records.  Elapsed time: 00:15:18s.  Time for last 1,000,000:    1s.  Last read position: chr17:64,499,770
INFO	2026-06-08 09:04:15	MarkDuplicates	Tracking 173764 as yet unmatched pairs. 15833 records in RAM.
INFO	2026-06-08 09:04:17	MarkDuplicates	Read   477,000,000 records.  Elapsed time: 00:15:21s.  Time for last 1,000,000:    2s.  Last read position: chr17:68,525,826
INFO	2026-06-08 09:04:17	MarkDuplicates	Tracking 173630 as yet unmatched pairs. 15691 records in RAM.
INFO	2026-06-08 09:04:19	MarkDuplicates	Read   478,000,000 records.  Elapsed time: 00:15:23s.  Time for last 1,000,000:    1s.  Last read position: chr17:75,502,875
INFO	2026-06-08 09:04:19	MarkDuplicates	Tracking 170223 as yet unmatched pairs. 12282 records in RAM.
INFO	2026-06-08 09:04:20	MarkDuplicates	Read   479,000,000 records.  Elapsed time: 00:15:24s.  Time for last 1,000,000:    1s.  Last read position: chr17:76,685,125
INFO	2026-06-08 09:04:20	MarkDuplicates	Tracking 168556 as yet unmatched pairs. 10609 records in RAM.
INFO	2026-06-08 09:04:22	MarkDuplicates	Read   480,000,000 records.  Elapsed time: 00:15:26s.  Time for last 1,000,000:    1s.  Last read position: chr17:79,077,767
INFO	2026-06-08 09:04:22	MarkDuplicates	Tracking 166284 as yet unmatched pairs. 8327 records in RAM.
INFO	2026-06-08 09:04:24	MarkDuplicates	Read   481,000,000 records.  Elapsed time: 00:15:28s.  Time for last 1,000,000:    1s.  Last read position: chr17:80,389,312
INFO	2026-06-08 09:04:24	MarkDuplicates	Tracking 164926 as yet unmatched pairs. 6968 records in RAM.
INFO	2026-06-08 09:04:25	MarkDuplicates	Read   482,000,000 records.  Elapsed time: 00:15:29s.  Time for last 1,000,000:    1s.  Last read position: chr17:81,855,502
INFO	2026-06-08 09:04:25	MarkDuplicates	Tracking 163179 as yet unmatched pairs. 5214 records in RAM.
INFO	2026-06-08 09:04:27	MarkDuplicates	Read   483,000,000 records.  Elapsed time: 00:15:31s.  Time for last 1,000,000:    1s.  Last read position: chr17:82,085,794
INFO	2026-06-08 09:04:27	MarkDuplicates	Tracking 163133 as yet unmatched pairs. 5163 records in RAM.
INFO	2026-06-08 09:04:29	MarkDuplicates	Read   484,000,000 records.  Elapsed time: 00:15:33s.  Time for last 1,000,000:    1s.  Last read position: chr17:83,093,175
INFO	2026-06-08 09:04:29	MarkDuplicates	Tracking 158462 as yet unmatched pairs. 486 records in RAM.
INFO	2026-06-08 09:04:30	MarkDuplicates	Read   485,000,000 records.  Elapsed time: 00:15:34s.  Time for last 1,000,000:    1s.  Last read position: chr18:11,897,169
INFO	2026-06-08 09:04:30	MarkDuplicates	Tracking 156562 as yet unmatched pairs. 7466 records in RAM.
INFO	2026-06-08 09:04:32	MarkDuplicates	Read   486,000,000 records.  Elapsed time: 00:15:36s.  Time for last 1,000,000:    1s.  Last read position: chr18:26,052,710
INFO	2026-06-08 09:04:32	MarkDuplicates	Tracking 155903 as yet unmatched pairs. 6796 records in RAM.
INFO	2026-06-08 09:04:34	MarkDuplicates	Read   487,000,000 records.  Elapsed time: 00:15:38s.  Time for last 1,000,000:    1s.  Last read position: chr18:46,844,797
INFO	2026-06-08 09:04:34	MarkDuplicates	Tracking 153310 as yet unmatched pairs. 4202 records in RAM.
INFO	2026-06-08 09:04:35	MarkDuplicates	Read   488,000,000 records.  Elapsed time: 00:15:39s.  Time for last 1,000,000:    1s.  Last read position: chr18:58,744,363
INFO	2026-06-08 09:04:35	MarkDuplicates	Tracking 151652 as yet unmatched pairs. 2541 records in RAM.
INFO	2026-06-08 09:04:37	MarkDuplicates	Read   489,000,000 records.  Elapsed time: 00:15:41s.  Time for last 1,000,000:    2s.  Last read position: chr18:76,881,324
INFO	2026-06-08 09:04:37	MarkDuplicates	Tracking 149771 as yet unmatched pairs. 658 records in RAM.
INFO	2026-06-08 09:04:40	MarkDuplicates	Read   490,000,000 records.  Elapsed time: 00:15:44s.  Time for last 1,000,000:    2s.  Last read position: chr19:1,036,442
INFO	2026-06-08 09:04:40	MarkDuplicates	Tracking 148015 as yet unmatched pairs. 59954 records in RAM.
INFO	2026-06-08 09:04:41	MarkDuplicates	Read   491,000,000 records.  Elapsed time: 00:15:45s.  Time for last 1,000,000:    1s.  Last read position: chr19:1,491,342
INFO	2026-06-08 09:04:41	MarkDuplicates	Tracking 145929 as yet unmatched pairs. 57866 records in RAM.
INFO	2026-06-08 09:06:57	MarkDuplicates	Read   492,000,000 records.  Elapsed time: 00:18:01s.  Time for last 1,000,000:  135s.  Last read position: chr19:2,732,992
INFO	2026-06-08 09:06:57	MarkDuplicates	Tracking 143400 as yet unmatched pairs. 55337 records in RAM.
INFO	2026-06-08 09:06:59	MarkDuplicates	Read   493,000,000 records.  Elapsed time: 00:18:03s.  Time for last 1,000,000:    1s.  Last read position: chr19:4,363,398
INFO	2026-06-08 09:06:59	MarkDuplicates	Tracking 141274 as yet unmatched pairs. 53207 records in RAM.
INFO	2026-06-08 09:07:01	MarkDuplicates	Read   494,000,000 records.  Elapsed time: 00:18:04s.  Time for last 1,000,000:    1s.  Last read position: chr19:5,244,219
INFO	2026-06-08 09:07:01	MarkDuplicates	Tracking 138877 as yet unmatched pairs. 50810 records in RAM.
INFO	2026-06-08 09:07:02	MarkDuplicates	Read   495,000,000 records.  Elapsed time: 00:18:06s.  Time for last 1,000,000:    1s.  Last read position: chr19:6,709,842
INFO	2026-06-08 09:07:02	MarkDuplicates	Tracking 139514 as yet unmatched pairs. 51445 records in RAM.
INFO	2026-06-08 09:07:04	MarkDuplicates	Read   496,000,000 records.  Elapsed time: 00:18:08s.  Time for last 1,000,000:    1s.  Last read position: chr19:8,399,908
INFO	2026-06-08 09:07:04	MarkDuplicates	Tracking 135952 as yet unmatched pairs. 47880 records in RAM.
INFO	2026-06-08 09:07:06	MarkDuplicates	Read   497,000,000 records.  Elapsed time: 00:18:09s.  Time for last 1,000,000:    1s.  Last read position: chr19:10,357,900
INFO	2026-06-08 09:07:06	MarkDuplicates	Tracking 133320 as yet unmatched pairs. 45247 records in RAM.
INFO	2026-06-08 09:07:07	MarkDuplicates	Read   498,000,000 records.  Elapsed time: 00:18:11s.  Time for last 1,000,000:    1s.  Last read position: chr19:11,359,870
INFO	2026-06-08 09:07:07	MarkDuplicates	Tracking 131394 as yet unmatched pairs. 43310 records in RAM.
INFO	2026-06-08 09:07:09	MarkDuplicates	Read   499,000,000 records.  Elapsed time: 00:18:13s.  Time for last 1,000,000:    1s.  Last read position: chr19:12,940,309
INFO	2026-06-08 09:07:09	MarkDuplicates	Tracking 130095 as yet unmatched pairs. 41997 records in RAM.
INFO	2026-06-08 09:07:11	MarkDuplicates	Read   500,000,000 records.  Elapsed time: 00:18:15s.  Time for last 1,000,000:    2s.  Last read position: chr19:14,516,114
INFO	2026-06-08 09:07:11	MarkDuplicates	Tracking 128520 as yet unmatched pairs. 40416 records in RAM.
INFO	2026-06-08 09:07:13	MarkDuplicates	Read   501,000,000 records.  Elapsed time: 00:18:17s.  Time for last 1,000,000:    1s.  Last read position: chr19:15,265,440
INFO	2026-06-08 09:07:13	MarkDuplicates	Tracking 126644 as yet unmatched pairs. 38531 records in RAM.
INFO	2026-06-08 09:07:14	MarkDuplicates	Read   502,000,000 records.  Elapsed time: 00:18:18s.  Time for last 1,000,000:    1s.  Last read position: chr19:17,216,293
INFO	2026-06-08 09:07:14	MarkDuplicates	Tracking 123567 as yet unmatched pairs. 35445 records in RAM.
INFO	2026-06-08 09:07:16	MarkDuplicates	Read   503,000,000 records.  Elapsed time: 00:18:20s.  Time for last 1,000,000:    1s.  Last read position: chr19:18,461,654
INFO	2026-06-08 09:07:16	MarkDuplicates	Tracking 121642 as yet unmatched pairs. 33517 records in RAM.
INFO	2026-06-08 09:07:18	MarkDuplicates	Read   504,000,000 records.  Elapsed time: 00:18:22s.  Time for last 1,000,000:    1s.  Last read position: chr19:19,201,971
INFO	2026-06-08 09:07:18	MarkDuplicates	Tracking 119415 as yet unmatched pairs. 31282 records in RAM.
INFO	2026-06-08 09:07:19	MarkDuplicates	Read   505,000,000 records.  Elapsed time: 00:18:23s.  Time for last 1,000,000:    1s.  Last read position: chr19:33,301,577
INFO	2026-06-08 09:07:19	MarkDuplicates	Tracking 117536 as yet unmatched pairs. 29401 records in RAM.
INFO	2026-06-08 09:07:21	MarkDuplicates	Read   506,000,000 records.  Elapsed time: 00:18:25s.  Time for last 1,000,000:    2s.  Last read position: chr19:35,755,588
INFO	2026-06-08 09:07:21	MarkDuplicates	Tracking 115746 as yet unmatched pairs. 27610 records in RAM.
INFO	2026-06-08 09:07:23	MarkDuplicates	Read   507,000,000 records.  Elapsed time: 00:18:27s.  Time for last 1,000,000:    1s.  Last read position: chr19:38,710,270
INFO	2026-06-08 09:07:23	MarkDuplicates	Tracking 114347 as yet unmatched pairs. 26208 records in RAM.
INFO	2026-06-08 09:07:24	MarkDuplicates	Read   508,000,000 records.  Elapsed time: 00:18:28s.  Time for last 1,000,000:    1s.  Last read position: chr19:39,927,257
INFO	2026-06-08 09:07:24	MarkDuplicates	Tracking 111668 as yet unmatched pairs. 23528 records in RAM.
INFO	2026-06-08 09:07:26	MarkDuplicates	Read   509,000,000 records.  Elapsed time: 00:18:30s.  Time for last 1,000,000:    1s.  Last read position: chr19:41,294,613
INFO	2026-06-08 09:07:26	MarkDuplicates	Tracking 109946 as yet unmatched pairs. 21806 records in RAM.
INFO	2026-06-08 09:07:28	MarkDuplicates	Read   510,000,000 records.  Elapsed time: 00:18:32s.  Time for last 1,000,000:    2s.  Last read position: chr19:42,289,024
INFO	2026-06-08 09:07:28	MarkDuplicates	Tracking 108527 as yet unmatched pairs. 20387 records in RAM.
INFO	2026-06-08 09:07:30	MarkDuplicates	Read   511,000,000 records.  Elapsed time: 00:18:34s.  Time for last 1,000,000:    1s.  Last read position: chr19:44,793,584
INFO	2026-06-08 09:07:30	MarkDuplicates	Tracking 105893 as yet unmatched pairs. 17746 records in RAM.
INFO	2026-06-08 09:07:32	MarkDuplicates	Read   512,000,000 records.  Elapsed time: 00:18:36s.  Time for last 1,000,000:    1s.  Last read position: chr19:45,771,893
INFO	2026-06-08 09:07:32	MarkDuplicates	Tracking 103806 as yet unmatched pairs. 15659 records in RAM.
INFO	2026-06-08 09:07:34	MarkDuplicates	Read   513,000,000 records.  Elapsed time: 00:18:38s.  Time for last 1,000,000:    2s.  Last read position: chr19:47,679,705
INFO	2026-06-08 09:07:34	MarkDuplicates	Tracking 101505 as yet unmatched pairs. 13357 records in RAM.
INFO	2026-06-08 09:07:36	MarkDuplicates	Read   514,000,000 records.  Elapsed time: 00:18:40s.  Time for last 1,000,000:    2s.  Last read position: chr19:49,086,513
INFO	2026-06-08 09:07:36	MarkDuplicates	Tracking 102582 as yet unmatched pairs. 14434 records in RAM.
INFO	2026-06-08 09:07:38	MarkDuplicates	Read   515,000,000 records.  Elapsed time: 00:18:42s.  Time for last 1,000,000:    1s.  Last read position: chr19:49,597,782
INFO	2026-06-08 09:07:38	MarkDuplicates	Tracking 98157 as yet unmatched pairs. 10005 records in RAM.
INFO	2026-06-08 09:07:40	MarkDuplicates	Read   516,000,000 records.  Elapsed time: 00:18:43s.  Time for last 1,000,000:    1s.  Last read position: chr19:51,015,470
INFO	2026-06-08 09:07:40	MarkDuplicates	Tracking 95387 as yet unmatched pairs. 7234 records in RAM.
INFO	2026-06-08 09:07:42	MarkDuplicates	Read   517,000,000 records.  Elapsed time: 00:18:45s.  Time for last 1,000,000:    1s.  Last read position: chr19:54,174,030
INFO	2026-06-08 09:07:42	MarkDuplicates	Tracking 94017 as yet unmatched pairs. 5856 records in RAM.
INFO	2026-06-08 09:07:43	MarkDuplicates	Read   518,000,000 records.  Elapsed time: 00:18:47s.  Time for last 1,000,000:    1s.  Last read position: chr19:55,455,333
INFO	2026-06-08 09:07:43	MarkDuplicates	Tracking 91971 as yet unmatched pairs. 3805 records in RAM.
INFO	2026-06-08 09:07:45	MarkDuplicates	Read   519,000,000 records.  Elapsed time: 00:18:49s.  Time for last 1,000,000:    1s.  Last read position: chr19:57,808,865
INFO	2026-06-08 09:07:45	MarkDuplicates	Tracking 90135 as yet unmatched pairs. 1965 records in RAM.
INFO	2026-06-08 09:07:46	MarkDuplicates	Read   520,000,000 records.  Elapsed time: 00:18:50s.  Time for last 1,000,000:    1s.  Last read position: chr20:441,893
INFO	2026-06-08 09:07:46	MarkDuplicates	Tracking 88141 as yet unmatched pairs. 19906 records in RAM.
INFO	2026-06-08 09:07:48	MarkDuplicates	Read   521,000,000 records.  Elapsed time: 00:18:52s.  Time for last 1,000,000:    1s.  Last read position: chr20:3,802,071
INFO	2026-06-08 09:07:48	MarkDuplicates	Tracking 86037 as yet unmatched pairs. 17802 records in RAM.
INFO	2026-06-08 09:07:50	MarkDuplicates	Read   522,000,000 records.  Elapsed time: 00:18:54s.  Time for last 1,000,000:    1s.  Last read position: chr20:18,525,857
INFO	2026-06-08 09:07:50	MarkDuplicates	Tracking 84503 as yet unmatched pairs. 16267 records in RAM.
INFO	2026-06-08 09:07:51	MarkDuplicates	Read   523,000,000 records.  Elapsed time: 00:18:55s.  Time for last 1,000,000:    1s.  Last read position: chr20:32,431,589
INFO	2026-06-08 09:07:51	MarkDuplicates	Tracking 82541 as yet unmatched pairs. 14304 records in RAM.
INFO	2026-06-08 09:07:53	MarkDuplicates	Read   524,000,000 records.  Elapsed time: 00:18:57s.  Time for last 1,000,000:    2s.  Last read position: chr20:35,655,146
INFO	2026-06-08 09:07:53	MarkDuplicates	Tracking 81114 as yet unmatched pairs. 12876 records in RAM.
INFO	2026-06-08 09:07:56	MarkDuplicates	Read   525,000,000 records.  Elapsed time: 00:19:00s.  Time for last 1,000,000:    2s.  Last read position: chr20:38,969,118
INFO	2026-06-08 09:07:56	MarkDuplicates	Tracking 78805 as yet unmatched pairs. 10567 records in RAM.
INFO	2026-06-08 09:07:58	MarkDuplicates	Read   526,000,000 records.  Elapsed time: 00:19:02s.  Time for last 1,000,000:    1s.  Last read position: chr20:45,420,172
INFO	2026-06-08 09:07:58	MarkDuplicates	Tracking 77495 as yet unmatched pairs. 9256 records in RAM.
INFO	2026-06-08 09:08:00	MarkDuplicates	Read   527,000,000 records.  Elapsed time: 00:19:04s.  Time for last 1,000,000:    2s.  Last read position: chr20:49,028,538
INFO	2026-06-08 09:08:00	MarkDuplicates	Tracking 75627 as yet unmatched pairs. 7385 records in RAM.
INFO	2026-06-08 09:08:02	MarkDuplicates	Read   528,000,000 records.  Elapsed time: 00:19:06s.  Time for last 1,000,000:    1s.  Last read position: chr20:57,652,477
INFO	2026-06-08 09:08:02	MarkDuplicates	Tracking 75263 as yet unmatched pairs. 7019 records in RAM.
INFO	2026-06-08 09:08:04	MarkDuplicates	Read   529,000,000 records.  Elapsed time: 00:19:07s.  Time for last 1,000,000:    1s.  Last read position: chr20:62,327,553
INFO	2026-06-08 09:08:04	MarkDuplicates	Tracking 72646 as yet unmatched pairs. 4398 records in RAM.
INFO	2026-06-08 09:08:05	MarkDuplicates	Read   530,000,000 records.  Elapsed time: 00:19:09s.  Time for last 1,000,000:    1s.  Last read position: chr20:63,706,999
INFO	2026-06-08 09:08:05	MarkDuplicates	Tracking 69168 as yet unmatched pairs. 916 records in RAM.
INFO	2026-06-08 09:08:07	MarkDuplicates	Read   531,000,000 records.  Elapsed time: 00:19:11s.  Time for last 1,000,000:    1s.  Last read position: chr21:8,258,927
INFO	2026-06-08 09:08:07	MarkDuplicates	Tracking 67580 as yet unmatched pairs. 14361 records in RAM.
INFO	2026-06-08 09:08:08	MarkDuplicates	Read   532,000,000 records.  Elapsed time: 00:19:12s.  Time for last 1,000,000:    1s.  Last read position: chr21:25,764,303
INFO	2026-06-08 09:08:08	MarkDuplicates	Tracking 66913 as yet unmatched pairs. 13694 records in RAM.
INFO	2026-06-08 09:08:10	MarkDuplicates	Read   533,000,000 records.  Elapsed time: 00:19:14s.  Time for last 1,000,000:    2s.  Last read position: chr21:33,549,955
INFO	2026-06-08 09:08:10	MarkDuplicates	Tracking 66644 as yet unmatched pairs. 13424 records in RAM.
INFO	2026-06-08 09:08:12	MarkDuplicates	Read   534,000,000 records.  Elapsed time: 00:19:16s.  Time for last 1,000,000:    1s.  Last read position: chr21:37,156,824
INFO	2026-06-08 09:08:12	MarkDuplicates	Tracking 65053 as yet unmatched pairs. 11823 records in RAM.
INFO	2026-06-08 09:08:14	MarkDuplicates	Read   535,000,000 records.  Elapsed time: 00:19:17s.  Time for last 1,000,000:    1s.  Last read position: chr21:43,774,319
INFO	2026-06-08 09:08:14	MarkDuplicates	Tracking 61610 as yet unmatched pairs. 8380 records in RAM.
INFO	2026-06-08 09:08:15	MarkDuplicates	Read   536,000,000 records.  Elapsed time: 00:19:19s.  Time for last 1,000,000:    1s.  Last read position: chr21:45,504,547
INFO	2026-06-08 09:08:15	MarkDuplicates	Tracking 61494 as yet unmatched pairs. 8262 records in RAM.
INFO	2026-06-08 09:08:17	MarkDuplicates	Read   537,000,000 records.  Elapsed time: 00:19:21s.  Time for last 1,000,000:    1s.  Last read position: chr21:45,998,398
INFO	2026-06-08 09:08:17	MarkDuplicates	Tracking 57917 as yet unmatched pairs. 4681 records in RAM.
INFO	2026-06-08 09:08:19	MarkDuplicates	Read   538,000,000 records.  Elapsed time: 00:19:23s.  Time for last 1,000,000:    1s.  Last read position: chr21:46,119,814
INFO	2026-06-08 09:08:19	MarkDuplicates	Tracking 57817 as yet unmatched pairs. 4572 records in RAM.
INFO	2026-06-08 09:08:21	MarkDuplicates	Read   539,000,000 records.  Elapsed time: 00:19:24s.  Time for last 1,000,000:    1s.  Last read position: chr22:17,109,160
INFO	2026-06-08 09:08:21	MarkDuplicates	Tracking 53514 as yet unmatched pairs. 26392 records in RAM.
INFO	2026-06-08 09:08:23	MarkDuplicates	Read   540,000,000 records.  Elapsed time: 00:19:27s.  Time for last 1,000,000:    2s.  Last read position: chr22:20,727,848
INFO	2026-06-08 09:08:23	MarkDuplicates	Tracking 51284 as yet unmatched pairs. 24162 records in RAM.
INFO	2026-06-08 09:08:26	MarkDuplicates	Read   541,000,000 records.  Elapsed time: 00:19:30s.  Time for last 1,000,000:    3s.  Last read position: chr22:23,781,192
INFO	2026-06-08 09:08:26	MarkDuplicates	Tracking 50647 as yet unmatched pairs. 23523 records in RAM.
INFO	2026-06-08 09:08:28	MarkDuplicates	Read   542,000,000 records.  Elapsed time: 00:19:32s.  Time for last 1,000,000:    1s.  Last read position: chr22:27,858,400
INFO	2026-06-08 09:08:28	MarkDuplicates	Tracking 47492 as yet unmatched pairs. 20362 records in RAM.
INFO	2026-06-08 09:08:30	MarkDuplicates	Read   543,000,000 records.  Elapsed time: 00:19:33s.  Time for last 1,000,000:    1s.  Last read position: chr22:29,298,747
INFO	2026-06-08 09:08:30	MarkDuplicates	Tracking 49990 as yet unmatched pairs. 22860 records in RAM.
INFO	2026-06-08 09:08:31	MarkDuplicates	Read   544,000,000 records.  Elapsed time: 00:19:35s.  Time for last 1,000,000:    1s.  Last read position: chr22:31,196,975
INFO	2026-06-08 09:08:31	MarkDuplicates	Tracking 43549 as yet unmatched pairs. 16419 records in RAM.
INFO	2026-06-08 09:08:33	MarkDuplicates	Read   545,000,000 records.  Elapsed time: 00:19:37s.  Time for last 1,000,000:    1s.  Last read position: chr22:36,284,248
INFO	2026-06-08 09:08:33	MarkDuplicates	Tracking 42328 as yet unmatched pairs. 15197 records in RAM.
INFO	2026-06-08 09:08:35	MarkDuplicates	Read   546,000,000 records.  Elapsed time: 00:19:39s.  Time for last 1,000,000:    1s.  Last read position: chr22:37,232,840
INFO	2026-06-08 09:08:35	MarkDuplicates	Tracking 39950 as yet unmatched pairs. 12819 records in RAM.
INFO	2026-06-08 09:08:36	MarkDuplicates	Read   547,000,000 records.  Elapsed time: 00:19:40s.  Time for last 1,000,000:    1s.  Last read position: chr22:38,495,917
INFO	2026-06-08 09:08:36	MarkDuplicates	Tracking 40622 as yet unmatched pairs. 13491 records in RAM.
INFO	2026-06-08 09:08:38	MarkDuplicates	Read   548,000,000 records.  Elapsed time: 00:19:42s.  Time for last 1,000,000:    1s.  Last read position: chr22:40,844,841
INFO	2026-06-08 09:08:38	MarkDuplicates	Tracking 35814 as yet unmatched pairs. 8683 records in RAM.
INFO	2026-06-08 09:08:40	MarkDuplicates	Read   549,000,000 records.  Elapsed time: 00:19:44s.  Time for last 1,000,000:    1s.  Last read position: chr22:42,596,319
INFO	2026-06-08 09:08:40	MarkDuplicates	Tracking 33977 as yet unmatched pairs. 6846 records in RAM.
INFO	2026-06-08 09:08:42	MarkDuplicates	Read   550,000,000 records.  Elapsed time: 00:19:46s.  Time for last 1,000,000:    1s.  Last read position: chr22:46,378,592
INFO	2026-06-08 09:08:42	MarkDuplicates	Tracking 32382 as yet unmatched pairs. 5251 records in RAM.
INFO	2026-06-08 09:08:44	MarkDuplicates	Read   551,000,000 records.  Elapsed time: 00:19:47s.  Time for last 1,000,000:    1s.  Last read position: chr22:50,289,004
INFO	2026-06-08 09:08:44	MarkDuplicates	Tracking 30424 as yet unmatched pairs. 3289 records in RAM.
INFO	2026-06-08 09:08:45	MarkDuplicates	Read   552,000,000 records.  Elapsed time: 00:19:49s.  Time for last 1,000,000:    1s.  Last read position: chrX:1,387,331
INFO	2026-06-08 09:08:45	MarkDuplicates	Tracking 28073 as yet unmatched pairs. 24846 records in RAM.
INFO	2026-06-08 09:08:47	MarkDuplicates	Read   553,000,000 records.  Elapsed time: 00:19:51s.  Time for last 1,000,000:    1s.  Last read position: chrX:3,320,363
INFO	2026-06-08 09:08:47	MarkDuplicates	Tracking 27361 as yet unmatched pairs. 24131 records in RAM.
INFO	2026-06-08 09:08:49	MarkDuplicates	Read   554,000,000 records.  Elapsed time: 00:19:53s.  Time for last 1,000,000:    1s.  Last read position: chrX:11,765,526
INFO	2026-06-08 09:08:49	MarkDuplicates	Tracking 23708 as yet unmatched pairs. 20478 records in RAM.
INFO	2026-06-08 09:08:50	MarkDuplicates	Read   555,000,000 records.  Elapsed time: 00:19:54s.  Time for last 1,000,000:    1s.  Last read position: chrX:37,783,489
INFO	2026-06-08 09:08:50	MarkDuplicates	Tracking 22362 as yet unmatched pairs. 19125 records in RAM.
INFO	2026-06-08 09:08:52	MarkDuplicates	Read   556,000,000 records.  Elapsed time: 00:19:56s.  Time for last 1,000,000:    1s.  Last read position: chrX:47,199,572
INFO	2026-06-08 09:08:52	MarkDuplicates	Tracking 22549 as yet unmatched pairs. 19312 records in RAM.
INFO	2026-06-08 09:08:54	MarkDuplicates	Read   557,000,000 records.  Elapsed time: 00:19:58s.  Time for last 1,000,000:    2s.  Last read position: chrX:49,076,500
INFO	2026-06-08 09:08:54	MarkDuplicates	Tracking 19040 as yet unmatched pairs. 15803 records in RAM.
INFO	2026-06-08 09:08:56	MarkDuplicates	Read   558,000,000 records.  Elapsed time: 00:19:59s.  Time for last 1,000,000:    1s.  Last read position: chrX:53,602,632
INFO	2026-06-08 09:08:56	MarkDuplicates	Tracking 17708 as yet unmatched pairs. 14469 records in RAM.
INFO	2026-06-08 09:08:57	MarkDuplicates	Read   559,000,000 records.  Elapsed time: 00:20:01s.  Time for last 1,000,000:    1s.  Last read position: chrX:69,162,767
INFO	2026-06-08 09:08:57	MarkDuplicates	Tracking 14998 as yet unmatched pairs. 11758 records in RAM.
INFO	2026-06-08 09:09:00	MarkDuplicates	Read   560,000,000 records.  Elapsed time: 00:20:03s.  Time for last 1,000,000:    2s.  Last read position: chrX:74,031,665
INFO	2026-06-08 09:09:00	MarkDuplicates	Tracking 13305 as yet unmatched pairs. 10065 records in RAM.
INFO	2026-06-08 09:09:01	MarkDuplicates	Read   561,000,000 records.  Elapsed time: 00:20:05s.  Time for last 1,000,000:    1s.  Last read position: chrX:101,412,044
INFO	2026-06-08 09:09:01	MarkDuplicates	Tracking 13499 as yet unmatched pairs. 10259 records in RAM.
INFO	2026-06-08 09:09:04	MarkDuplicates	Read   562,000,000 records.  Elapsed time: 00:20:08s.  Time for last 1,000,000:    2s.  Last read position: chrX:118,749,679
INFO	2026-06-08 09:09:04	MarkDuplicates	Tracking 11151 as yet unmatched pairs. 7911 records in RAM.
INFO	2026-06-08 09:09:06	MarkDuplicates	Read   563,000,000 records.  Elapsed time: 00:20:10s.  Time for last 1,000,000:    1s.  Last read position: chrX:136,509,096
INFO	2026-06-08 09:09:06	MarkDuplicates	Tracking 8952 as yet unmatched pairs. 5712 records in RAM.
INFO	2026-06-08 09:09:07	MarkDuplicates	Read   564,000,000 records.  Elapsed time: 00:20:11s.  Time for last 1,000,000:    1s.  Last read position: chrX:153,950,970
INFO	2026-06-08 09:09:07	MarkDuplicates	Tracking 7221 as yet unmatched pairs. 3980 records in RAM.
INFO	2026-06-08 09:09:09	MarkDuplicates	Read   565,000,000 records.  Elapsed time: 00:20:13s.  Time for last 1,000,000:    1s.  Last read position: chrX:154,365,184
INFO	2026-06-08 09:09:09	MarkDuplicates	Tracking 6212 as yet unmatched pairs. 2971 records in RAM.
INFO	2026-06-08 09:09:11	MarkDuplicates	Read   566,000,000 records.  Elapsed time: 00:20:15s.  Time for last 1,000,000:    1s.  Last read position: GL000218.1:53,152
INFO	2026-06-08 09:09:11	MarkDuplicates	Tracking 3095 as yet unmatched pairs. 3 records in RAM.
INFO	2026-06-08 09:09:12	MarkDuplicates	Read   567,000,000 records.  Elapsed time: 00:20:16s.  Time for last 1,000,000:    1s.  Last read position: KI270733.1:131,024
INFO	2026-06-08 09:09:12	MarkDuplicates	Tracking 657 as yet unmatched pairs. 621 records in RAM.
INFO	2026-06-08 09:09:12	MarkDuplicates	Read 567567742 records. 0 pairs never matched.
INFO	2026-06-08 09:09:44	MarkDuplicates	After buildSortedReadEndLists freeMemory: 204142032; totalMemory: 234881024; maxMemory: 63585648640
INFO	2026-06-08 09:09:44	MarkDuplicates	Will retain up to 1987051520 duplicate indices before spilling to disk.
INFO	2026-06-08 09:09:49	MarkDuplicates	Traversing read pair information and detecting duplicates.
WARNING	2026-06-08 09:09:50	SortingCollection	There is not enough memory per file for buffering. Reading will be unbuffered.
INFO	2026-06-08 09:10:00	OpticalDuplicateFinder	Large duplicate set. size = 1720
INFO	2026-06-08 09:10:00	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:10,142
INFO	2026-06-08 09:10:00	OpticalDuplicateFinder	Large duplicate set. size = 1070
INFO	2026-06-08 09:10:00	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:20,254
INFO	2026-06-08 09:10:00	OpticalDuplicateFinder	Large duplicate set. size = 1236
INFO	2026-06-08 09:10:00	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-22,379
INFO	2026-06-08 09:10:00	OpticalDuplicateFinder	Large duplicate set. size = 1259
INFO	2026-06-08 09:10:00	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-15,721
INFO	2026-06-08 09:10:00	OpticalDuplicateFinder	Large duplicate set. size = 1092
INFO	2026-06-08 09:10:00	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:31,499
INFO	2026-06-08 09:10:00	OpticalDuplicateFinder	Large duplicate set. size = 1018
INFO	2026-06-08 09:10:00	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:10,878
INFO	2026-06-08 09:10:01	OpticalDuplicateFinder	Large duplicate set. size = 1141
INFO	2026-06-08 09:10:01	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-19,531
INFO	2026-06-08 09:10:01	OpticalDuplicateFinder	Large duplicate set. size = 1011
INFO	2026-06-08 09:10:01	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:16,387
INFO	2026-06-08 09:10:01	OpticalDuplicateFinder	Large duplicate set. size = 1068
INFO	2026-06-08 09:10:01	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:21,565
INFO	2026-06-08 09:10:02	OpticalDuplicateFinder	Large duplicate set. size = 1271
INFO	2026-06-08 09:10:02	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-28,608
INFO	2026-06-08 09:10:02	OpticalDuplicateFinder	Large duplicate set. size = 1207
INFO	2026-06-08 09:10:02	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:20,683
INFO	2026-06-08 09:10:02	OpticalDuplicateFinder	Large duplicate set. size = 1410
INFO	2026-06-08 09:10:02	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:24,728
INFO	2026-06-08 09:10:02	OpticalDuplicateFinder	Large duplicate set. size = 1013
INFO	2026-06-08 09:10:02	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-13,836
INFO	2026-06-08 09:10:02	OpticalDuplicateFinder	Large duplicate set. size = 1194
INFO	2026-06-08 09:10:02	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:10,409
INFO	2026-06-08 09:10:03	OpticalDuplicateFinder	Large duplicate set. size = 1095
INFO	2026-06-08 09:10:03	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-28,244
INFO	2026-06-08 09:10:03	OpticalDuplicateFinder	Large duplicate set. size = 1322
INFO	2026-06-08 09:10:03	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:23,579
INFO	2026-06-08 09:10:03	OpticalDuplicateFinder	Large duplicate set. size = 1070
INFO	2026-06-08 09:10:03	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-18,836
INFO	2026-06-08 09:10:10	OpticalDuplicateFinder	Large duplicate set. size = 1321
INFO	2026-06-08 09:10:10	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:23,911
INFO	2026-06-08 09:10:37	OpticalDuplicateFinder	Large duplicate set. size = 1732
INFO	2026-06-08 09:10:37	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-27,451
INFO	2026-06-08 09:10:37	OpticalDuplicateFinder	Large duplicate set. size = 1150
INFO	2026-06-08 09:10:37	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-13,860
INFO	2026-06-08 09:10:37	OpticalDuplicateFinder	Large duplicate set. size = 2052
INFO	2026-06-08 09:10:37	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:25,456
INFO	2026-06-08 09:10:37	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:3,006
INFO	2026-06-08 09:10:37	OpticalDuplicateFinder	Large duplicate set. size = 1076
INFO	2026-06-08 09:10:37	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:2,262
INFO	2026-06-08 09:10:37	OpticalDuplicateFinder	Large duplicate set. size = 1253
INFO	2026-06-08 09:10:37	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:10,676
INFO	2026-06-08 09:10:37	OpticalDuplicateFinder	Large duplicate set. size = 2063
INFO	2026-06-08 09:10:37	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:1,267
INFO	2026-06-08 09:10:37	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:24,218
INFO	2026-06-08 09:10:37	OpticalDuplicateFinder	Large duplicate set. size = 1172
INFO	2026-06-08 09:10:37	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-25,558
INFO	2026-06-08 09:10:37	OpticalDuplicateFinder	Large duplicate set. size = 1413
INFO	2026-06-08 09:10:37	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-13,876
INFO	2026-06-08 09:10:37	OpticalDuplicateFinder	Large duplicate set. size = 1555
INFO	2026-06-08 09:10:37	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-20,502
INFO	2026-06-08 09:10:37	OpticalDuplicateFinder	Large duplicate set. size = 1025
INFO	2026-06-08 09:10:37	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:22,714
INFO	2026-06-08 09:10:37	OpticalDuplicateFinder	Large duplicate set. size = 1180
INFO	2026-06-08 09:10:37	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-26,901
INFO	2026-06-08 09:10:37	OpticalDuplicateFinder	Large duplicate set. size = 2457
INFO	2026-06-08 09:10:37	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:15,934
INFO	2026-06-08 09:10:37	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:8,669
INFO	2026-06-08 09:10:37	OpticalDuplicateFinder	Large duplicate set. size = 1154
INFO	2026-06-08 09:10:37	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:2,068
INFO	2026-06-08 09:10:37	OpticalDuplicateFinder	Large duplicate set. size = 1148
INFO	2026-06-08 09:10:37	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:20,675
INFO	2026-06-08 09:10:37	OpticalDuplicateFinder	Large duplicate set. size = 1015
INFO	2026-06-08 09:10:37	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:10,813
INFO	2026-06-08 09:10:37	OpticalDuplicateFinder	Large duplicate set. size = 1540
INFO	2026-06-08 09:10:37	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-30,825
INFO	2026-06-08 09:10:37	OpticalDuplicateFinder	Large duplicate set. size = 1222
INFO	2026-06-08 09:10:37	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:18,871
INFO	2026-06-08 09:10:37	OpticalDuplicateFinder	Large duplicate set. size = 1733
INFO	2026-06-08 09:10:37	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-23,479
INFO	2026-06-08 09:10:37	OpticalDuplicateFinder	Large duplicate set. size = 1180
INFO	2026-06-08 09:10:37	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-28,980
INFO	2026-06-08 09:10:37	OpticalDuplicateFinder	Large duplicate set. size = 1276
INFO	2026-06-08 09:10:37	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:32,397
INFO	2026-06-08 09:10:37	OpticalDuplicateFinder	Large duplicate set. size = 1016
INFO	2026-06-08 09:10:37	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-19,014
INFO	2026-06-08 09:10:37	OpticalDuplicateFinder	Large duplicate set. size = 1245
INFO	2026-06-08 09:10:37	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-28,802
INFO	2026-06-08 09:10:37	OpticalDuplicateFinder	Large duplicate set. size = 1558
INFO	2026-06-08 09:10:37	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-24,838
INFO	2026-06-08 09:10:37	OpticalDuplicateFinder	Large duplicate set. size = 1271
INFO	2026-06-08 09:10:37	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:14,098
INFO	2026-06-08 09:10:38	OpticalDuplicateFinder	Large duplicate set. size = 1228
INFO	2026-06-08 09:10:38	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-14,888
INFO	2026-06-08 09:10:38	OpticalDuplicateFinder	Large duplicate set. size = 1171
INFO	2026-06-08 09:10:38	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:5,231
INFO	2026-06-08 09:10:38	OpticalDuplicateFinder	Large duplicate set. size = 1262
INFO	2026-06-08 09:10:38	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-23,665
INFO	2026-06-08 09:10:38	OpticalDuplicateFinder	Large duplicate set. size = 1318
INFO	2026-06-08 09:10:38	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:22,074
INFO	2026-06-08 09:10:38	OpticalDuplicateFinder	Large duplicate set. size = 1086
INFO	2026-06-08 09:10:38	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:2,278
INFO	2026-06-08 09:10:38	OpticalDuplicateFinder	Large duplicate set. size = 1300
INFO	2026-06-08 09:10:38	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-26,456
INFO	2026-06-08 09:10:38	OpticalDuplicateFinder	Large duplicate set. size = 1395
INFO	2026-06-08 09:10:38	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-14,871
INFO	2026-06-08 09:10:38	OpticalDuplicateFinder	Large duplicate set. size = 1263
INFO	2026-06-08 09:10:38	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:4,932
INFO	2026-06-08 09:10:38	OpticalDuplicateFinder	Large duplicate set. size = 1198
INFO	2026-06-08 09:10:38	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:13,273
INFO	2026-06-08 09:10:38	OpticalDuplicateFinder	Large duplicate set. size = 1073
INFO	2026-06-08 09:10:38	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-21,877
INFO	2026-06-08 09:10:38	OpticalDuplicateFinder	Large duplicate set. size = 1063
INFO	2026-06-08 09:10:38	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-27,646
INFO	2026-06-08 09:10:38	OpticalDuplicateFinder	Large duplicate set. size = 1024
INFO	2026-06-08 09:10:38	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-32,734
INFO	2026-06-08 09:10:38	OpticalDuplicateFinder	Large duplicate set. size = 1622
INFO	2026-06-08 09:10:38	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-16,902
INFO	2026-06-08 09:10:38	OpticalDuplicateFinder	Large duplicate set. size = 1157
INFO	2026-06-08 09:10:38	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-16,400
INFO	2026-06-08 09:10:38	OpticalDuplicateFinder	Large duplicate set. size = 1915
INFO	2026-06-08 09:10:38	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-21,335
INFO	2026-06-08 09:10:38	OpticalDuplicateFinder	Large duplicate set. size = 1089
INFO	2026-06-08 09:10:38	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:20,214
INFO	2026-06-08 09:10:38	OpticalDuplicateFinder	Large duplicate set. size = 1015
INFO	2026-06-08 09:10:38	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:4,123
INFO	2026-06-08 09:10:38	OpticalDuplicateFinder	Large duplicate set. size = 1939
INFO	2026-06-08 09:10:38	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-24,321
INFO	2026-06-08 09:10:38	OpticalDuplicateFinder	Large duplicate set. size = 1288
INFO	2026-06-08 09:10:38	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-16,943
INFO	2026-06-08 09:10:38	OpticalDuplicateFinder	Large duplicate set. size = 2794
INFO	2026-06-08 09:10:38	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-16,862
INFO	2026-06-08 09:10:38	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-21,991
INFO	2026-06-08 09:10:38	OpticalDuplicateFinder	Large duplicate set. size = 1062
INFO	2026-06-08 09:10:38	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-21,530
INFO	2026-06-08 09:10:38	OpticalDuplicateFinder	Large duplicate set. size = 1423
INFO	2026-06-08 09:10:38	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-14,151
INFO	2026-06-08 09:10:38	OpticalDuplicateFinder	Large duplicate set. size = 1194
INFO	2026-06-08 09:10:38	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-22,767
INFO	2026-06-08 09:10:38	OpticalDuplicateFinder	Large duplicate set. size = 2537
INFO	2026-06-08 09:10:38	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:15,821
INFO	2026-06-08 09:10:38	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-15,988
INFO	2026-06-08 09:10:38	OpticalDuplicateFinder	Large duplicate set. size = 1691
INFO	2026-06-08 09:10:38	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-18,107
INFO	2026-06-08 09:10:38	OpticalDuplicateFinder	Large duplicate set. size = 3995
INFO	2026-06-08 09:10:38	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:2,780
INFO	2026-06-08 09:10:38	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-19,127
INFO	2026-06-08 09:10:38	OpticalDuplicateFinder	compared         3,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-22,460
INFO	2026-06-08 09:10:38	OpticalDuplicateFinder	Large duplicate set. size = 1274
INFO	2026-06-08 09:10:38	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-32,225
INFO	2026-06-08 09:10:38	OpticalDuplicateFinder	Large duplicate set. size = 1061
INFO	2026-06-08 09:10:38	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:21,468
INFO	2026-06-08 09:10:38	OpticalDuplicateFinder	Large duplicate set. size = 1156
INFO	2026-06-08 09:10:38	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-24,685
INFO	2026-06-08 09:10:38	OpticalDuplicateFinder	Large duplicate set. size = 1941
INFO	2026-06-08 09:10:38	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:3,734
INFO	2026-06-08 09:10:38	OpticalDuplicateFinder	Large duplicate set. size = 1253
INFO	2026-06-08 09:10:38	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:17,164
INFO	2026-06-08 09:10:38	OpticalDuplicateFinder	Large duplicate set. size = 1828
INFO	2026-06-08 09:10:38	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:29,695
INFO	2026-06-08 09:10:38	OpticalDuplicateFinder	Large duplicate set. size = 1685
INFO	2026-06-08 09:10:38	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:27,576
INFO	2026-06-08 09:10:38	OpticalDuplicateFinder	Large duplicate set. size = 1516
INFO	2026-06-08 09:10:38	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-26,440
INFO	2026-06-08 09:10:38	OpticalDuplicateFinder	Large duplicate set. size = 1126
INFO	2026-06-08 09:10:38	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:21,217
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	Large duplicate set. size = 1498
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:12,180
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	Large duplicate set. size = 1091
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:2,100
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	Large duplicate set. size = 2831
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:23,272
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:21,168
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	Large duplicate set. size = 1150
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:9,365
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	Large duplicate set. size = 1320
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:15,578
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	Large duplicate set. size = 1778
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-23,965
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	Large duplicate set. size = 1165
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:6,898
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	Large duplicate set. size = 1045
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:30,383
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	Large duplicate set. size = 1181
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-23,172
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	Large duplicate set. size = 1128
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:26,419
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	Large duplicate set. size = 1258
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:23,353
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	Large duplicate set. size = 1096
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:21,694
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	Large duplicate set. size = 1505
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-25,122
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	Large duplicate set. size = 1062
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:27,470
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	Large duplicate set. size = 1030
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-14,313
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	Large duplicate set. size = 1329
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-29,425
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	Large duplicate set. size = 1823
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-21,489
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	Large duplicate set. size = 1396
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:2,853
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	Large duplicate set. size = 1363
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:21,759
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	Large duplicate set. size = 1198
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:27,810
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	Large duplicate set. size = 1932
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-30,065
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	Large duplicate set. size = 1206
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-27,112
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	Large duplicate set. size = 1449
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:20,270
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	Large duplicate set. size = 1709
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:20,327
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	Large duplicate set. size = 1088
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:32,114
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	Large duplicate set. size = 1153
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:19,421
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	Large duplicate set. size = 2196
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:25,173
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:18,725
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	Large duplicate set. size = 3119
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:11,930
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-32,208
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	compared         3,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:23,555
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	Large duplicate set. size = 2131
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:28,385
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-26,966
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	Large duplicate set. size = 1125
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:11,833
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	Large duplicate set. size = 1276
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:14,713
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	Large duplicate set. size = 1267
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:4,082
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	Large duplicate set. size = 1320
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:22,770
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	Large duplicate set. size = 2569
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-30,226
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-29,312
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	Large duplicate set. size = 1144
INFO	2026-06-08 09:10:39	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:21,541
INFO	2026-06-08 09:10:40	OpticalDuplicateFinder	Large duplicate set. size = 1207
INFO	2026-06-08 09:10:40	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:11,792
INFO	2026-06-08 09:10:40	OpticalDuplicateFinder	Large duplicate set. size = 1187
INFO	2026-06-08 09:10:40	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:22,859
INFO	2026-06-08 09:10:40	OpticalDuplicateFinder	Large duplicate set. size = 1063
INFO	2026-06-08 09:10:40	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:29,088
INFO	2026-06-08 09:10:40	OpticalDuplicateFinder	Large duplicate set. size = 1248
INFO	2026-06-08 09:10:40	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:5,021
INFO	2026-06-08 09:10:40	OpticalDuplicateFinder	Large duplicate set. size = 1023
INFO	2026-06-08 09:10:40	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:1,194
INFO	2026-06-08 09:10:40	OpticalDuplicateFinder	Large duplicate set. size = 1070
INFO	2026-06-08 09:10:40	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-26,408
INFO	2026-06-08 09:10:40	OpticalDuplicateFinder	Large duplicate set. size = 1003
INFO	2026-06-08 09:10:40	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-17,339
INFO	2026-06-08 09:10:40	OpticalDuplicateFinder	Large duplicate set. size = 1221
INFO	2026-06-08 09:10:40	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-15,996
INFO	2026-06-08 09:10:40	OpticalDuplicateFinder	Large duplicate set. size = 1380
INFO	2026-06-08 09:10:40	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:25,674
INFO	2026-06-08 09:10:40	OpticalDuplicateFinder	Large duplicate set. size = 1095
INFO	2026-06-08 09:10:40	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-14,168
INFO	2026-06-08 09:10:40	OpticalDuplicateFinder	Large duplicate set. size = 1503
INFO	2026-06-08 09:10:40	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:24,048
INFO	2026-06-08 09:10:40	OpticalDuplicateFinder	Large duplicate set. size = 1326
INFO	2026-06-08 09:10:40	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-23,148
INFO	2026-06-08 09:10:41	OpticalDuplicateFinder	Large duplicate set. size = 1283
INFO	2026-06-08 09:10:41	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:1,655
INFO	2026-06-08 09:10:41	OpticalDuplicateFinder	Large duplicate set. size = 1983
INFO	2026-06-08 09:10:41	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-16,069
INFO	2026-06-08 09:10:41	OpticalDuplicateFinder	Large duplicate set. size = 1506
INFO	2026-06-08 09:10:41	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:5,943
INFO	2026-06-08 09:10:41	OpticalDuplicateFinder	Large duplicate set. size = 2011
INFO	2026-06-08 09:10:41	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-14,621
INFO	2026-06-08 09:10:41	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:11,412
INFO	2026-06-08 09:10:41	OpticalDuplicateFinder	Large duplicate set. size = 1036
INFO	2026-06-08 09:10:41	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:15,627
INFO	2026-06-08 09:10:41	OpticalDuplicateFinder	Large duplicate set. size = 1675
INFO	2026-06-08 09:10:41	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-19,450
INFO	2026-06-08 09:10:41	OpticalDuplicateFinder	Large duplicate set. size = 1202
INFO	2026-06-08 09:10:41	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-19,086
INFO	2026-06-08 09:10:41	OpticalDuplicateFinder	Large duplicate set. size = 1743
INFO	2026-06-08 09:10:41	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:9,495
INFO	2026-06-08 09:10:41	OpticalDuplicateFinder	Large duplicate set. size = 1091
INFO	2026-06-08 09:10:41	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-30,113
INFO	2026-06-08 09:10:41	OpticalDuplicateFinder	Large duplicate set. size = 1794
INFO	2026-06-08 09:10:41	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:29,687
INFO	2026-06-08 09:10:41	OpticalDuplicateFinder	Large duplicate set. size = 1221
INFO	2026-06-08 09:10:41	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:10,142
INFO	2026-06-08 09:10:41	OpticalDuplicateFinder	Large duplicate set. size = 1210
INFO	2026-06-08 09:10:41	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-25,380
INFO	2026-06-08 09:10:41	OpticalDuplicateFinder	Large duplicate set. size = 1167
INFO	2026-06-08 09:10:41	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:23,094
INFO	2026-06-08 09:10:41	OpticalDuplicateFinder	Large duplicate set. size = 2369
INFO	2026-06-08 09:10:41	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-14,661
INFO	2026-06-08 09:10:41	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:27,956
INFO	2026-06-08 09:10:41	OpticalDuplicateFinder	Large duplicate set. size = 1692
INFO	2026-06-08 09:10:41	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:11,800
INFO	2026-06-08 09:10:41	OpticalDuplicateFinder	Large duplicate set. size = 1999
INFO	2026-06-08 09:10:41	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:14,114
INFO	2026-06-08 09:10:41	OpticalDuplicateFinder	Large duplicate set. size = 1424
INFO	2026-06-08 09:10:41	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-32,548
INFO	2026-06-08 09:10:41	OpticalDuplicateFinder	Large duplicate set. size = 1186
INFO	2026-06-08 09:10:41	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-17,606
INFO	2026-06-08 09:10:41	OpticalDuplicateFinder	Large duplicate set. size = 1087
INFO	2026-06-08 09:10:41	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:17,220
INFO	2026-06-08 09:10:41	OpticalDuplicateFinder	Large duplicate set. size = 1215
INFO	2026-06-08 09:10:41	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:9,147
INFO	2026-06-08 09:10:41	OpticalDuplicateFinder	Large duplicate set. size = 1073
INFO	2026-06-08 09:10:41	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:29,833
INFO	2026-06-08 09:10:41	OpticalDuplicateFinder	Large duplicate set. size = 1583
INFO	2026-06-08 09:10:41	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:27,956
INFO	2026-06-08 09:10:41	OpticalDuplicateFinder	Large duplicate set. size = 1015
INFO	2026-06-08 09:10:41	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-18,690
INFO	2026-06-08 09:10:41	OpticalDuplicateFinder	Large duplicate set. size = 1014
INFO	2026-06-08 09:10:41	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-19,305
INFO	2026-06-08 09:10:41	OpticalDuplicateFinder	Large duplicate set. size = 1784
INFO	2026-06-08 09:10:41	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:8,410
INFO	2026-06-08 09:10:41	OpticalDuplicateFinder	Large duplicate set. size = 1309
INFO	2026-06-08 09:10:41	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-17,719
INFO	2026-06-08 09:10:41	OpticalDuplicateFinder	Large duplicate set. size = 2879
INFO	2026-06-08 09:10:41	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-14,410
INFO	2026-06-08 09:10:41	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:9,438
INFO	2026-06-08 09:10:41	OpticalDuplicateFinder	Large duplicate set. size = 1109
INFO	2026-06-08 09:10:41	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:30,520
INFO	2026-06-08 09:10:41	OpticalDuplicateFinder	Large duplicate set. size = 1335
INFO	2026-06-08 09:10:41	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-25,000
INFO	2026-06-08 09:10:41	OpticalDuplicateFinder	Large duplicate set. size = 1373
INFO	2026-06-08 09:10:41	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-31,949
INFO	2026-06-08 09:10:41	OpticalDuplicateFinder	Large duplicate set. size = 1004
INFO	2026-06-08 09:10:41	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:29,970
INFO	2026-06-08 09:10:41	OpticalDuplicateFinder	Large duplicate set. size = 1055
INFO	2026-06-08 09:10:41	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-27,888
INFO	2026-06-08 09:10:42	OpticalDuplicateFinder	Large duplicate set. size = 1932
INFO	2026-06-08 09:10:42	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-14,394
INFO	2026-06-08 09:10:42	OpticalDuplicateFinder	Large duplicate set. size = 2175
INFO	2026-06-08 09:10:42	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:19,761
INFO	2026-06-08 09:10:42	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-23,714
INFO	2026-06-08 09:10:42	OpticalDuplicateFinder	Large duplicate set. size = 2359
INFO	2026-06-08 09:10:42	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:11,622
INFO	2026-06-08 09:10:42	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:27,932
INFO	2026-06-08 09:10:42	OpticalDuplicateFinder	Large duplicate set. size = 1070
INFO	2026-06-08 09:10:42	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:9,114
INFO	2026-06-08 09:10:42	OpticalDuplicateFinder	Large duplicate set. size = 1147
INFO	2026-06-08 09:10:42	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:16,379
INFO	2026-06-08 09:10:42	OpticalDuplicateFinder	Large duplicate set. size = 1253
INFO	2026-06-08 09:10:42	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-28,616
INFO	2026-06-08 09:10:42	OpticalDuplicateFinder	Large duplicate set. size = 1344
INFO	2026-06-08 09:10:42	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:10,773
INFO	2026-06-08 09:10:42	OpticalDuplicateFinder	Large duplicate set. size = 1549
INFO	2026-06-08 09:10:42	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:5,450
INFO	2026-06-08 09:10:42	OpticalDuplicateFinder	Large duplicate set. size = 1572
INFO	2026-06-08 09:10:42	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:22,527
INFO	2026-06-08 09:10:42	OpticalDuplicateFinder	Large duplicate set. size = 1809
INFO	2026-06-08 09:10:42	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-17,994
INFO	2026-06-08 09:10:42	OpticalDuplicateFinder	Large duplicate set. size = 1086
INFO	2026-06-08 09:10:42	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-14,030
INFO	2026-06-08 09:10:42	OpticalDuplicateFinder	Large duplicate set. size = 1209
INFO	2026-06-08 09:10:42	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-31,594
INFO	2026-06-08 09:10:42	OpticalDuplicateFinder	Large duplicate set. size = 1308
INFO	2026-06-08 09:10:42	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:1,793
INFO	2026-06-08 09:10:42	OpticalDuplicateFinder	Large duplicate set. size = 1407
INFO	2026-06-08 09:10:42	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:8,257
INFO	2026-06-08 09:10:42	OpticalDuplicateFinder	Large duplicate set. size = 1460
INFO	2026-06-08 09:10:42	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:21,921
INFO	2026-06-08 09:10:42	OpticalDuplicateFinder	Large duplicate set. size = 1648
INFO	2026-06-08 09:10:42	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:25,747
INFO	2026-06-08 09:10:42	OpticalDuplicateFinder	Large duplicate set. size = 1178
INFO	2026-06-08 09:10:42	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-25,680
INFO	2026-06-08 09:10:42	OpticalDuplicateFinder	Large duplicate set. size = 1104
INFO	2026-06-08 09:10:42	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:20,804
INFO	2026-06-08 09:10:42	OpticalDuplicateFinder	Large duplicate set. size = 1445
INFO	2026-06-08 09:10:42	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:12,698
INFO	2026-06-08 09:10:42	OpticalDuplicateFinder	Large duplicate set. size = 1154
INFO	2026-06-08 09:10:42	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-25,566
INFO	2026-06-08 09:10:42	OpticalDuplicateFinder	Large duplicate set. size = 1198
INFO	2026-06-08 09:10:42	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:32,672
INFO	2026-06-08 09:10:42	OpticalDuplicateFinder	Large duplicate set. size = 1073
INFO	2026-06-08 09:10:42	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:4,050
INFO	2026-06-08 09:10:42	OpticalDuplicateFinder	Large duplicate set. size = 1201
INFO	2026-06-08 09:10:42	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-31,189
INFO	2026-06-08 09:10:42	OpticalDuplicateFinder	Large duplicate set. size = 1311
INFO	2026-06-08 09:10:42	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:16,873
INFO	2026-06-08 09:10:42	OpticalDuplicateFinder	Large duplicate set. size = 1666
INFO	2026-06-08 09:10:42	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-15,058
INFO	2026-06-08 09:10:42	OpticalDuplicateFinder	Large duplicate set. size = 1069
INFO	2026-06-08 09:10:42	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:19,995
INFO	2026-06-08 09:10:42	OpticalDuplicateFinder	Large duplicate set. size = 1252
INFO	2026-06-08 09:10:42	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:30,326
INFO	2026-06-08 09:10:42	OpticalDuplicateFinder	Large duplicate set. size = 1039
INFO	2026-06-08 09:10:42	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:32,106
INFO	2026-06-08 09:10:42	OpticalDuplicateFinder	Large duplicate set. size = 1041
INFO	2026-06-08 09:10:42	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-19,677
INFO	2026-06-08 09:10:43	OpticalDuplicateFinder	Large duplicate set. size = 1299
INFO	2026-06-08 09:10:43	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:11,355
INFO	2026-06-08 09:10:43	OpticalDuplicateFinder	Large duplicate set. size = 1409
INFO	2026-06-08 09:10:43	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:6,089
INFO	2026-06-08 09:10:43	OpticalDuplicateFinder	Large duplicate set. size = 1446
INFO	2026-06-08 09:10:43	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-27,840
INFO	2026-06-08 09:10:43	OpticalDuplicateFinder	Large duplicate set. size = 2016
INFO	2026-06-08 09:10:43	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:27,705
INFO	2026-06-08 09:10:43	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-16,465
INFO	2026-06-08 09:10:43	OpticalDuplicateFinder	Large duplicate set. size = 1017
INFO	2026-06-08 09:10:43	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-27,735
INFO	2026-06-08 09:10:43	OpticalDuplicateFinder	Large duplicate set. size = 1843
INFO	2026-06-08 09:10:43	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-19,604
INFO	2026-06-08 09:10:43	OpticalDuplicateFinder	Large duplicate set. size = 2294
INFO	2026-06-08 09:10:43	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:23,959
INFO	2026-06-08 09:10:43	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:29,202
INFO	2026-06-08 09:10:43	OpticalDuplicateFinder	Large duplicate set. size = 1487
INFO	2026-06-08 09:10:43	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:29,906
INFO	2026-06-08 09:10:43	OpticalDuplicateFinder	Large duplicate set. size = 1981
INFO	2026-06-08 09:10:43	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:18,499
INFO	2026-06-08 09:10:43	OpticalDuplicateFinder	Large duplicate set. size = 1523
INFO	2026-06-08 09:10:43	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-17,274
INFO	2026-06-08 09:10:43	OpticalDuplicateFinder	Large duplicate set. size = 3062
INFO	2026-06-08 09:10:43	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:5,142
INFO	2026-06-08 09:10:43	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-16,004
INFO	2026-06-08 09:10:43	OpticalDuplicateFinder	compared         3,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-29,684
INFO	2026-06-08 09:10:43	OpticalDuplicateFinder	Large duplicate set. size = 1290
INFO	2026-06-08 09:10:43	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:22,147
INFO	2026-06-08 09:10:43	OpticalDuplicateFinder	Large duplicate set. size = 1198
INFO	2026-06-08 09:10:43	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:28,805
INFO	2026-06-08 09:10:43	OpticalDuplicateFinder	Large duplicate set. size = 3642
INFO	2026-06-08 09:10:43	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-23,673
INFO	2026-06-08 09:10:43	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-20,130
INFO	2026-06-08 09:10:43	OpticalDuplicateFinder	compared         3,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-19,394
INFO	2026-06-08 09:10:43	OpticalDuplicateFinder	Large duplicate set. size = 1799
INFO	2026-06-08 09:10:43	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:16,873
INFO	2026-06-08 09:10:43	OpticalDuplicateFinder	Large duplicate set. size = 1141
INFO	2026-06-08 09:10:43	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:30,634
INFO	2026-06-08 09:10:43	OpticalDuplicateFinder	Large duplicate set. size = 1037
INFO	2026-06-08 09:10:43	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:4,325
INFO	2026-06-08 09:10:43	OpticalDuplicateFinder	Large duplicate set. size = 1609
INFO	2026-06-08 09:10:43	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:21,629
INFO	2026-06-08 09:10:43	OpticalDuplicateFinder	Large duplicate set. size = 1059
INFO	2026-06-08 09:10:43	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-31,327
INFO	2026-06-08 09:10:43	OpticalDuplicateFinder	Large duplicate set. size = 1807
INFO	2026-06-08 09:10:43	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:29,355
INFO	2026-06-08 09:10:43	OpticalDuplicateFinder	Large duplicate set. size = 1001
INFO	2026-06-08 09:10:43	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:7,965
INFO	2026-06-08 09:10:43	OpticalDuplicateFinder	Large duplicate set. size = 1052
INFO	2026-06-08 09:10:43	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-25,939
INFO	2026-06-08 09:10:43	OpticalDuplicateFinder	Large duplicate set. size = 1703
INFO	2026-06-08 09:10:43	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-30,607
INFO	2026-06-08 09:10:43	OpticalDuplicateFinder	Large duplicate set. size = 1126
INFO	2026-06-08 09:10:43	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:17,633
INFO	2026-06-08 09:10:43	OpticalDuplicateFinder	Large duplicate set. size = 1189
INFO	2026-06-08 09:10:43	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-26,950
INFO	2026-06-08 09:10:43	OpticalDuplicateFinder	Large duplicate set. size = 1390
INFO	2026-06-08 09:10:43	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:13,030
INFO	2026-06-08 09:10:43	OpticalDuplicateFinder	Large duplicate set. size = 1108
INFO	2026-06-08 09:10:43	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-21,214
INFO	2026-06-08 09:10:43	OpticalDuplicateFinder	Large duplicate set. size = 1364
INFO	2026-06-08 09:10:43	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-15,519
INFO	2026-06-08 09:10:43	OpticalDuplicateFinder	Large duplicate set. size = 1522
INFO	2026-06-08 09:10:43	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-23,746
INFO	2026-06-08 09:10:43	OpticalDuplicateFinder	Large duplicate set. size = 1661
INFO	2026-06-08 09:10:43	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:32,721
INFO	2026-06-08 09:10:43	OpticalDuplicateFinder	Large duplicate set. size = 1436
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:27,082
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	Large duplicate set. size = 1439
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:23,078
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	Large duplicate set. size = 1133
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:21,686
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	Large duplicate set. size = 1087
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:8,645
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	Large duplicate set. size = 1059
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:23,765
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	Large duplicate set. size = 1126
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:23,927
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	Large duplicate set. size = 1195
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-26,553
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	Large duplicate set. size = 1474
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:30,464
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	Large duplicate set. size = 1631
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:19,728
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	Large duplicate set. size = 1453
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:29,218
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	Large duplicate set. size = 2834
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:21,872
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-19,070
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	Large duplicate set. size = 1598
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:19,502
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	Large duplicate set. size = 1300
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:15,158
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	Large duplicate set. size = 2578
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:22,463
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-15,268
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	Large duplicate set. size = 2066
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-17,857
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-32,686
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	Large duplicate set. size = 1049
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:1,712
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	Large duplicate set. size = 1052
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-14,621
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	Large duplicate set. size = 1041
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-20,340
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	Large duplicate set. size = 1956
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:14,138
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	Large duplicate set. size = 1069
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-24,175
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	Large duplicate set. size = 1594
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-22,557
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	Large duplicate set. size = 1715
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:30,100
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	Large duplicate set. size = 1036
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-22,970
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	Large duplicate set. size = 1135
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-31,165
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	Large duplicate set. size = 1049
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:27,737
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	Large duplicate set. size = 2101
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-15,066
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:2,788
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	Large duplicate set. size = 1129
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:21,330
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	Large duplicate set. size = 1754
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:14,551
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	Large duplicate set. size = 1577
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:17,051
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	Large duplicate set. size = 1055
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:4,001
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	Large duplicate set. size = 1098
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-15,300
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	Large duplicate set. size = 1114
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-24,482
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	Large duplicate set. size = 1195
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:28,288
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	Large duplicate set. size = 2392
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:26,524
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-24,612
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	Large duplicate set. size = 1246
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:9,082
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	Large duplicate set. size = 1138
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-19,790
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	Large duplicate set. size = 1906
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:6,849
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	Large duplicate set. size = 1826
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-16,627
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	Large duplicate set. size = 1021
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-17,533
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	Large duplicate set. size = 1023
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:13,612
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	Large duplicate set. size = 1320
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-23,868
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	Large duplicate set. size = 1355
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-24,701
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	Large duplicate set. size = 1295
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:29,614
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	Large duplicate set. size = 1015
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:27,026
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	Large duplicate set. size = 1064
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-29,781
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	Large duplicate set. size = 1337
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:2,027
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	Large duplicate set. size = 1207
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:3,120
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	Large duplicate set. size = 1090
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-21,473
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	Large duplicate set. size = 1589
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:8,726
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	Large duplicate set. size = 1773
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:5,571
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	Large duplicate set. size = 1068
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-21,505
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	Large duplicate set. size = 1227
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:28,190
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	Large duplicate set. size = 1329
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:2,739
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	Large duplicate set. size = 1227
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:20,214
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	Large duplicate set. size = 1280
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:25,424
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	Large duplicate set. size = 1111
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:22,989
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	Large duplicate set. size = 1452
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:28,927
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	Large duplicate set. size = 1625
INFO	2026-06-08 09:10:44	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:14,114
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	Large duplicate set. size = 1231
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-14,960
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	Large duplicate set. size = 1593
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:15,433
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	Large duplicate set. size = 1176
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:9,681
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	Large duplicate set. size = 1265
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:15,004
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	Large duplicate set. size = 2484
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:13,912
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:11,307
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	Large duplicate set. size = 1477
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:21,541
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	Large duplicate set. size = 1259
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:3,071
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	Large duplicate set. size = 1401
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-32,305
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	Large duplicate set. size = 1581
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-16,797
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	Large duplicate set. size = 1301
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-25,057
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	Large duplicate set. size = 2240
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:21,282
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:32,049
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	Large duplicate set. size = 1257
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:2,197
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	Large duplicate set. size = 1167
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:7,334
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	Large duplicate set. size = 1290
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:4,139
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	Large duplicate set. size = 1607
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:24,793
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	Large duplicate set. size = 1369
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:25,254
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	Large duplicate set. size = 1686
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-25,607
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	Large duplicate set. size = 1384
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:15,012
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	Large duplicate set. size = 1546
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:9,147
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	Large duplicate set. size = 1247
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:1,615
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	Large duplicate set. size = 1282
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:19,510
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	Large duplicate set. size = 2073
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:25,205
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-18,083
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	Large duplicate set. size = 2299
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:9,931
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-30,647
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	Large duplicate set. size = 1093
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:15,198
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	Large duplicate set. size = 1273
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:16,743
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	Large duplicate set. size = 2205
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:27,818
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:11,986
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	Large duplicate set. size = 2399
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:8,524
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-20,284
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	Large duplicate set. size = 1145
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:27,147
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	Large duplicate set. size = 1343
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:18,183
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	Large duplicate set. size = 1162
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-14,402
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	Large duplicate set. size = 1306
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-17,994
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	Large duplicate set. size = 1113
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:20,481
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	Large duplicate set. size = 1181
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:27,754
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	Large duplicate set. size = 1193
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:28,975
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	Large duplicate set. size = 1148
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:23,927
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	Large duplicate set. size = 1003
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:5,158
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	Large duplicate set. size = 1355
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-21,902
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	Large duplicate set. size = 2333
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:2,998
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:3,103
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	Large duplicate set. size = 1036
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:15,303
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	Large duplicate set. size = 1726
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:17,277
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	Large duplicate set. size = 1687
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:17,665
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	Large duplicate set. size = 1243
INFO	2026-06-08 09:10:45	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-19,976
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	Large duplicate set. size = 2134
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:11,323
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:28,425
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	Large duplicate set. size = 2021
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:5,676
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:22,147
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	Large duplicate set. size = 2861
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:20,246
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:25,132
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	Large duplicate set. size = 1662
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:17,423
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	Large duplicate set. size = 1821
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-28,552
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	Large duplicate set. size = 3607
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-14,168
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:16,784
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	compared         3,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:31,693
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	Large duplicate set. size = 1221
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:23,094
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	Large duplicate set. size = 1278
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:8,985
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	Large duplicate set. size = 1115
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:12,933
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	Large duplicate set. size = 1095
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:22,180
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	Large duplicate set. size = 1766
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-26,384
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	Large duplicate set. size = 2080
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:22,269
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:14,146
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	Large duplicate set. size = 4742
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:14,632
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:30,488
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	compared         3,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:8,863
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	compared         4,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:20,157
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	Large duplicate set. size = 1328
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:11,938
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	Large duplicate set. size = 2138
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:12,496
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:3,993
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	Large duplicate set. size = 1244
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:23,434
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	Large duplicate set. size = 1852
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:23,474
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	Large duplicate set. size = 1034
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-30,315
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	Large duplicate set. size = 1817
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-14,151
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	Large duplicate set. size = 1173
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-14,386
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	Large duplicate set. size = 1863
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:24,008
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	Large duplicate set. size = 1177
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:5,506
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	Large duplicate set. size = 1355
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:14,049
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	Large duplicate set. size = 1178
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:15,845
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	Large duplicate set. size = 1096
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:11,113
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	Large duplicate set. size = 1147
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:24,380
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	Large duplicate set. size = 1244
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-18,908
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	Large duplicate set. size = 1217
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:19,146
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	Large duplicate set. size = 1009
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-13,885
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	Large duplicate set. size = 1355
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:13,839
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	Large duplicate set. size = 1099
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:18,709
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	Large duplicate set. size = 1675
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:10,263
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	Large duplicate set. size = 1408
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-13,731
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	Large duplicate set. size = 1511
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:12,480
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	Large duplicate set. size = 1689
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-23,269
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	Large duplicate set. size = 1003
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:11,129
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	Large duplicate set. size = 1002
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:3,209
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	Large duplicate set. size = 1075
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-27,314
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	Large duplicate set. size = 1483
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:16,258
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	Large duplicate set. size = 1643
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:3,751
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	Large duplicate set. size = 1116
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:27,422
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	Large duplicate set. size = 1074
INFO	2026-06-08 09:10:46	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:5,822
INFO	2026-06-08 09:10:47	OpticalDuplicateFinder	Large duplicate set. size = 1053
INFO	2026-06-08 09:10:47	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:17,131
INFO	2026-06-08 09:10:47	OpticalDuplicateFinder	Large duplicate set. size = 1143
INFO	2026-06-08 09:10:47	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:2,335
INFO	2026-06-08 09:10:47	OpticalDuplicateFinder	Large duplicate set. size = 1347
INFO	2026-06-08 09:10:47	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:30,334
INFO	2026-06-08 09:10:47	OpticalDuplicateFinder	Large duplicate set. size = 1179
INFO	2026-06-08 09:10:47	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-24,377
INFO	2026-06-08 09:10:47	OpticalDuplicateFinder	Large duplicate set. size = 1410
INFO	2026-06-08 09:10:47	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:26,532
INFO	2026-06-08 09:10:47	OpticalDuplicateFinder	Large duplicate set. size = 1341
INFO	2026-06-08 09:10:47	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:20,036
INFO	2026-06-08 09:10:47	OpticalDuplicateFinder	Large duplicate set. size = 1326
INFO	2026-06-08 09:10:47	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-23,609
INFO	2026-06-08 09:10:47	OpticalDuplicateFinder	Large duplicate set. size = 1155
INFO	2026-06-08 09:10:47	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:31,095
INFO	2026-06-08 09:10:47	OpticalDuplicateFinder	Large duplicate set. size = 1202
INFO	2026-06-08 09:10:47	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:6,218
INFO	2026-06-08 09:10:47	OpticalDuplicateFinder	Large duplicate set. size = 1102
INFO	2026-06-08 09:10:47	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:25,788
INFO	2026-06-08 09:10:47	OpticalDuplicateFinder	Large duplicate set. size = 1005
INFO	2026-06-08 09:10:47	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:19,016
INFO	2026-06-08 09:10:47	OpticalDuplicateFinder	Large duplicate set. size = 1070
INFO	2026-06-08 09:10:47	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:27,430
INFO	2026-06-08 09:10:48	OpticalDuplicateFinder	Large duplicate set. size = 1666
INFO	2026-06-08 09:10:48	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:27,123
INFO	2026-06-08 09:10:48	OpticalDuplicateFinder	Large duplicate set. size = 1777
INFO	2026-06-08 09:10:48	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:10,522
INFO	2026-06-08 09:10:48	OpticalDuplicateFinder	Large duplicate set. size = 1038
INFO	2026-06-08 09:10:48	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:27,131
INFO	2026-06-08 09:10:48	OpticalDuplicateFinder	Large duplicate set. size = 1281
INFO	2026-06-08 09:10:48	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-27,071
INFO	2026-06-08 09:10:48	OpticalDuplicateFinder	Large duplicate set. size = 1306
INFO	2026-06-08 09:10:48	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-24,766
INFO	2026-06-08 09:10:48	OpticalDuplicateFinder	Large duplicate set. size = 1251
INFO	2026-06-08 09:10:48	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-16,263
INFO	2026-06-08 09:10:48	OpticalDuplicateFinder	Large duplicate set. size = 1272
INFO	2026-06-08 09:10:48	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-14,710
INFO	2026-06-08 09:10:48	OpticalDuplicateFinder	Large duplicate set. size = 1495
INFO	2026-06-08 09:10:48	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-17,485
INFO	2026-06-08 09:10:48	OpticalDuplicateFinder	Large duplicate set. size = 1093
INFO	2026-06-08 09:10:48	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-21,877
INFO	2026-06-08 09:10:48	OpticalDuplicateFinder	Large duplicate set. size = 1091
INFO	2026-06-08 09:10:48	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:4,196
INFO	2026-06-08 09:10:48	OpticalDuplicateFinder	Large duplicate set. size = 1249
INFO	2026-06-08 09:10:48	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-21,085
INFO	2026-06-08 09:10:48	OpticalDuplicateFinder	Large duplicate set. size = 1439
INFO	2026-06-08 09:10:48	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:2,974
INFO	2026-06-08 09:10:48	OpticalDuplicateFinder	Large duplicate set. size = 1015
INFO	2026-06-08 09:10:48	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:13,418
INFO	2026-06-08 09:10:48	OpticalDuplicateFinder	Large duplicate set. size = 1210
INFO	2026-06-08 09:10:48	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:31,418
INFO	2026-06-08 09:10:48	OpticalDuplicateFinder	Large duplicate set. size = 1060
INFO	2026-06-08 09:10:48	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:13,281
INFO	2026-06-08 09:10:48	OpticalDuplicateFinder	Large duplicate set. size = 1002
INFO	2026-06-08 09:10:48	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:4,592
INFO	2026-06-08 09:10:48	OpticalDuplicateFinder	Large duplicate set. size = 1099
INFO	2026-06-08 09:10:48	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:8,152
INFO	2026-06-08 09:10:48	OpticalDuplicateFinder	Large duplicate set. size = 1502
INFO	2026-06-08 09:10:48	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-17,201
INFO	2026-06-08 09:10:48	OpticalDuplicateFinder	Large duplicate set. size = 1126
INFO	2026-06-08 09:10:48	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:2,157
INFO	2026-06-08 09:10:48	OpticalDuplicateFinder	Large duplicate set. size = 1263
INFO	2026-06-08 09:10:48	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-19,256
INFO	2026-06-08 09:10:48	OpticalDuplicateFinder	Large duplicate set. size = 1864
INFO	2026-06-08 09:10:48	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:32,235
INFO	2026-06-08 09:10:48	OpticalDuplicateFinder	Large duplicate set. size = 2539
INFO	2026-06-08 09:10:48	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-22,128
INFO	2026-06-08 09:10:48	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:16,986
INFO	2026-06-08 09:10:48	OpticalDuplicateFinder	Large duplicate set. size = 1363
INFO	2026-06-08 09:10:48	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-24,402
INFO	2026-06-08 09:10:48	OpticalDuplicateFinder	Large duplicate set. size = 1240
INFO	2026-06-08 09:10:48	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:22,447
INFO	2026-06-08 09:10:48	OpticalDuplicateFinder	Large duplicate set. size = 2654
INFO	2026-06-08 09:10:48	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:19,850
INFO	2026-06-08 09:10:48	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:19,283
INFO	2026-06-08 09:10:48	OpticalDuplicateFinder	Large duplicate set. size = 1394
INFO	2026-06-08 09:10:48	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-14,532
INFO	2026-06-08 09:10:48	OpticalDuplicateFinder	Large duplicate set. size = 1012
INFO	2026-06-08 09:10:48	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-17,824
INFO	2026-06-08 09:10:48	OpticalDuplicateFinder	Large duplicate set. size = 1543
INFO	2026-06-08 09:10:48	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-27,638
INFO	2026-06-08 09:10:48	OpticalDuplicateFinder	Large duplicate set. size = 3228
INFO	2026-06-08 09:10:48	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:7,788
INFO	2026-06-08 09:10:48	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:27,074
INFO	2026-06-08 09:10:48	OpticalDuplicateFinder	compared         3,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:5,126
INFO	2026-06-08 09:10:48	OpticalDuplicateFinder	Large duplicate set. size = 1657
INFO	2026-06-08 09:10:48	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-19,361
INFO	2026-06-08 09:10:48	OpticalDuplicateFinder	Large duplicate set. size = 1018
INFO	2026-06-08 09:10:48	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:28,862
INFO	2026-06-08 09:10:48	OpticalDuplicateFinder	Large duplicate set. size = 1016
INFO	2026-06-08 09:10:48	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-20,227
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	Large duplicate set. size = 1031
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:11,905
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	Large duplicate set. size = 1189
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-14,661
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	Large duplicate set. size = 1303
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:17,819
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	Large duplicate set. size = 1753
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:20,084
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	Large duplicate set. size = 1077
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-20,300
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	Large duplicate set. size = 1068
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:27,527
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	Large duplicate set. size = 1036
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:7,383
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	Large duplicate set. size = 1599
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-15,001
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	Large duplicate set. size = 1108
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-19,928
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	Large duplicate set. size = 1320
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:25,068
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	Large duplicate set. size = 1245
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-28,398
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	Large duplicate set. size = 1349
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-14,095
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	Large duplicate set. size = 1083
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:23,862
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	Large duplicate set. size = 1458
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-14,823
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	Large duplicate set. size = 1040
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:9,745
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	Large duplicate set. size = 1306
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:29,396
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	Large duplicate set. size = 1144
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:22,479
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	Large duplicate set. size = 1803
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:22,673
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	Large duplicate set. size = 1067
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:23,417
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	Large duplicate set. size = 1341
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:31,726
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	Large duplicate set. size = 1021
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:4,260
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	Large duplicate set. size = 1402
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:27,527
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	Large duplicate set. size = 1303
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:24,582
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	Large duplicate set. size = 1533
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:31,977
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	Large duplicate set. size = 1387
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-24,846
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	Large duplicate set. size = 2386
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-22,711
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:8,184
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	Large duplicate set. size = 1495
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:17,431
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	Large duplicate set. size = 1667
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-24,798
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	Large duplicate set. size = 1405
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-29,595
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	Large duplicate set. size = 2645
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:30,682
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:5,255
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	Large duplicate set. size = 1435
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:2,286
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	Large duplicate set. size = 1206
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-31,569
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	Large duplicate set. size = 1221
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-22,112
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	Large duplicate set. size = 1671
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-18,666
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	Large duplicate set. size = 2344
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:28,684
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:1,987
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	Large duplicate set. size = 2651
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-25,494
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-18,229
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	Large duplicate set. size = 1247
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:5,611
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	Large duplicate set. size = 2943
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:8,103
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:16,153
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	Large duplicate set. size = 4602
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:5,207
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-28,527
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	compared         3,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-17,185
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	compared         4,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:25,205
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	Large duplicate set. size = 1236
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-28,665
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	Large duplicate set. size = 2863
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-31,513
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-27,136
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	Large duplicate set. size = 1134
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:6,170
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	Large duplicate set. size = 3518
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-25,089
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:1,105
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	compared         3,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:6,356
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	Large duplicate set. size = 1061
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:8,491
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	Large duplicate set. size = 1114
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:9,883
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	Large duplicate set. size = 1750
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:23,061
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	Large duplicate set. size = 1075
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:23,660
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	Large duplicate set. size = 1225
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:25,221
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	Large duplicate set. size = 1088
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-22,711
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	Large duplicate set. size = 1136
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:22,940
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	Large duplicate set. size = 1915
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:24,267
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	Large duplicate set. size = 1092
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-21,271
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	Large duplicate set. size = 1324
INFO	2026-06-08 09:10:49	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:30,933
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	Large duplicate set. size = 1087
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:20,837
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	Large duplicate set. size = 1042
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:5,393
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	Large duplicate set. size = 1861
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:15,716
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	Large duplicate set. size = 1096
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-23,358
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	Large duplicate set. size = 1307
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:24,048
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	Large duplicate set. size = 1125
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:4,560
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	Large duplicate set. size = 1091
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-23,342
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	Large duplicate set. size = 1493
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:11,371
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	Large duplicate set. size = 1013
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:5,029
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	Large duplicate set. size = 1358
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:20,788
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	Large duplicate set. size = 1064
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-15,511
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	Large duplicate set. size = 1001
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:10,425
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	Large duplicate set. size = 1035
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:8,200
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	Large duplicate set. size = 1567
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:28,352
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	Large duplicate set. size = 1035
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:27,131
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	Large duplicate set. size = 3393
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:12,399
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:18,385
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	compared         3,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-25,979
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	Large duplicate set. size = 1290
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-24,345
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	Large duplicate set. size = 1069
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-22,824
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	Large duplicate set. size = 5424
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-32,022
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-17,032
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	compared         3,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:24,315
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	compared         4,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:21,152
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	compared         5,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:22,892
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	Large duplicate set. size = 1506
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:14,316
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	Large duplicate set. size = 1269
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-27,233
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	Large duplicate set. size = 1037
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-14,556
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	Large duplicate set. size = 1051
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-24,507
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	Large duplicate set. size = 2165
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:20,335
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-32,184
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	Large duplicate set. size = 1215
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-23,601
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	Large duplicate set. size = 2454
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:20,756
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-26,327
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	Large duplicate set. size = 1109
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:31,370
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	Large duplicate set. size = 1156
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:13,345
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	Large duplicate set. size = 2913
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-25,073
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:3,993
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	Large duplicate set. size = 1392
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-32,208
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	Large duplicate set. size = 2641
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:4,074
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:9,883
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	Large duplicate set. size = 1302
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:5,514
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	Large duplicate set. size = 1662
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-22,978
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	Large duplicate set. size = 1018
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:17,843
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	Large duplicate set. size = 1343
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-17,994
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	Large duplicate set. size = 1008
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:15,335
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	Large duplicate set. size = 1321
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:20,942
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	Large duplicate set. size = 1793
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-24,733
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	Large duplicate set. size = 1118
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:14,065
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	Large duplicate set. size = 1142
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:2,254
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	Large duplicate set. size = 1299
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-23,835
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	Large duplicate set. size = 1556
INFO	2026-06-08 09:10:50	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:21,573
INFO	2026-06-08 09:10:51	OpticalDuplicateFinder	Large duplicate set. size = 1875
INFO	2026-06-08 09:10:51	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:19,558
INFO	2026-06-08 09:10:51	OpticalDuplicateFinder	Large duplicate set. size = 1236
INFO	2026-06-08 09:10:51	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:30,213
INFO	2026-06-08 09:10:51	OpticalDuplicateFinder	Large duplicate set. size = 1009
INFO	2026-06-08 09:10:51	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-25,672
INFO	2026-06-08 09:10:51	OpticalDuplicateFinder	Large duplicate set. size = 1329
INFO	2026-06-08 09:10:51	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:8,459
INFO	2026-06-08 09:10:51	OpticalDuplicateFinder	Large duplicate set. size = 1365
INFO	2026-06-08 09:10:51	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-21,392
INFO	2026-06-08 09:10:51	OpticalDuplicateFinder	Large duplicate set. size = 1757
INFO	2026-06-08 09:10:51	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-30,954
INFO	2026-06-08 09:10:51	OpticalDuplicateFinder	Large duplicate set. size = 1116
INFO	2026-06-08 09:10:51	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:5,951
INFO	2026-06-08 09:10:51	OpticalDuplicateFinder	Large duplicate set. size = 1187
INFO	2026-06-08 09:10:51	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-26,877
INFO	2026-06-08 09:10:51	OpticalDuplicateFinder	Large duplicate set. size = 1336
INFO	2026-06-08 09:10:51	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:2,408
INFO	2026-06-08 09:10:51	OpticalDuplicateFinder	Large duplicate set. size = 2343
INFO	2026-06-08 09:10:51	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:1,388
INFO	2026-06-08 09:10:51	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:29,258
INFO	2026-06-08 09:10:51	OpticalDuplicateFinder	Large duplicate set. size = 1119
INFO	2026-06-08 09:10:51	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-22,250
INFO	2026-06-08 09:10:51	OpticalDuplicateFinder	Large duplicate set. size = 1444
INFO	2026-06-08 09:10:51	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:16,509
INFO	2026-06-08 09:10:51	OpticalDuplicateFinder	Large duplicate set. size = 1114
INFO	2026-06-08 09:10:51	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-32,216
INFO	2026-06-08 09:10:51	OpticalDuplicateFinder	Large duplicate set. size = 1274
INFO	2026-06-08 09:10:51	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-23,220
INFO	2026-06-08 09:10:51	OpticalDuplicateFinder	Large duplicate set. size = 1082
INFO	2026-06-08 09:10:51	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:32,430
INFO	2026-06-08 09:10:51	OpticalDuplicateFinder	Large duplicate set. size = 1080
INFO	2026-06-08 09:10:51	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:4,357
INFO	2026-06-08 09:10:51	OpticalDuplicateFinder	Large duplicate set. size = 1377
INFO	2026-06-08 09:10:51	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:15,497
INFO	2026-06-08 09:10:51	OpticalDuplicateFinder	Large duplicate set. size = 1018
INFO	2026-06-08 09:10:51	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-24,960
INFO	2026-06-08 09:10:51	OpticalDuplicateFinder	Large duplicate set. size = 1595
INFO	2026-06-08 09:10:51	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-16,862
INFO	2026-06-08 09:10:51	OpticalDuplicateFinder	Large duplicate set. size = 1192
INFO	2026-06-08 09:10:51	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:20,893
INFO	2026-06-08 09:10:51	OpticalDuplicateFinder	Large duplicate set. size = 1152
INFO	2026-06-08 09:10:51	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:32,664
INFO	2026-06-08 09:10:51	OpticalDuplicateFinder	Large duplicate set. size = 1012
INFO	2026-06-08 09:10:51	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:30,569
INFO	2026-06-08 09:10:51	OpticalDuplicateFinder	Large duplicate set. size = 2377
INFO	2026-06-08 09:10:51	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-29,741
INFO	2026-06-08 09:10:51	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:30,795
INFO	2026-06-08 09:10:51	OpticalDuplicateFinder	Large duplicate set. size = 1568
INFO	2026-06-08 09:10:51	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:9,770
INFO	2026-06-08 09:10:51	OpticalDuplicateFinder	Large duplicate set. size = 1380
INFO	2026-06-08 09:10:51	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:30,828
INFO	2026-06-08 09:10:51	OpticalDuplicateFinder	Large duplicate set. size = 1652
INFO	2026-06-08 09:10:51	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:4,543
INFO	2026-06-08 09:10:51	OpticalDuplicateFinder	Large duplicate set. size = 1050
INFO	2026-06-08 09:10:51	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:19,947
INFO	2026-06-08 09:10:51	OpticalDuplicateFinder	Large duplicate set. size = 1126
INFO	2026-06-08 09:10:51	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:27,495
INFO	2026-06-08 09:10:52	OpticalDuplicateFinder	Large duplicate set. size = 1025
INFO	2026-06-08 09:10:52	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:10,481
INFO	2026-06-08 09:10:52	OpticalDuplicateFinder	Large duplicate set. size = 1656
INFO	2026-06-08 09:10:52	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:27,163
INFO	2026-06-08 09:10:52	OpticalDuplicateFinder	Large duplicate set. size = 1522
INFO	2026-06-08 09:10:52	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-25,469
INFO	2026-06-08 09:10:52	OpticalDuplicateFinder	Large duplicate set. size = 2072
INFO	2026-06-08 09:10:52	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:29,469
INFO	2026-06-08 09:10:52	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:4,390
INFO	2026-06-08 09:10:52	OpticalDuplicateFinder	Large duplicate set. size = 1891
INFO	2026-06-08 09:10:52	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:7,901
INFO	2026-06-08 09:10:52	OpticalDuplicateFinder	Large duplicate set. size = 1379
INFO	2026-06-08 09:10:52	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:20,359
INFO	2026-06-08 09:10:52	OpticalDuplicateFinder	Large duplicate set. size = 1117
INFO	2026-06-08 09:10:52	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:11,841
INFO	2026-06-08 09:10:52	OpticalDuplicateFinder	Large duplicate set. size = 1388
INFO	2026-06-08 09:10:52	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:13,879
INFO	2026-06-08 09:10:52	OpticalDuplicateFinder	Large duplicate set. size = 1424
INFO	2026-06-08 09:10:52	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-23,673
INFO	2026-06-08 09:10:52	OpticalDuplicateFinder	Large duplicate set. size = 1294
INFO	2026-06-08 09:10:52	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:21,807
INFO	2026-06-08 09:10:52	OpticalDuplicateFinder	Large duplicate set. size = 2700
INFO	2026-06-08 09:10:52	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-13,747
INFO	2026-06-08 09:10:52	OpticalDuplicateFinder	compared         2,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-18,439
INFO	2026-06-08 09:10:52	OpticalDuplicateFinder	Large duplicate set. size = 1117
INFO	2026-06-08 09:10:52	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:31,119
INFO	2026-06-08 09:10:52	OpticalDuplicateFinder	Large duplicate set. size = 1415
INFO	2026-06-08 09:10:52	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-27,484
INFO	2026-06-08 09:10:52	OpticalDuplicateFinder	Large duplicate set. size = 1115
INFO	2026-06-08 09:10:52	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:7,941
INFO	2026-06-08 09:10:52	OpticalDuplicateFinder	Large duplicate set. size = 1053
INFO	2026-06-08 09:10:52	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:10,918
INFO	2026-06-08 09:10:53	OpticalDuplicateFinder	Large duplicate set. size = 1004
INFO	2026-06-08 09:10:53	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:-31,642
INFO	2026-06-08 09:10:53	OpticalDuplicateFinder	Large duplicate set. size = 1261
INFO	2026-06-08 09:10:53	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:32,697
INFO	2026-06-08 09:10:53	OpticalDuplicateFinder	Large duplicate set. size = 1077
INFO	2026-06-08 09:10:53	OpticalDuplicateFinder	compared         1,000 ReadEnds to others.  Elapsed time: 00:00:00s.  Time for last 1,000:    0s.  Last read position: 0:18,919
INFO	2026-06-08 09:11:20	MarkDuplicates	Traversing fragment information and detecting duplicates.
WARNING	2026-06-08 09:11:20	SortingCollection	There is not enough memory per file for buffering. Reading will be unbuffered.
INFO	2026-06-08 09:12:26	MarkDuplicates	Sorting list of duplicate records.
INFO	2026-06-08 09:12:27	MarkDuplicates	After generateDuplicateIndexes freeMemory: 203797512; totalMemory: 234881024; maxMemory: 63585648640
INFO	2026-06-08 09:12:27	MarkDuplicates	Marking 282460489 records as duplicates.
INFO	2026-06-08 09:12:27	MarkDuplicates	Found 22941465 optical duplicate clusters.
INFO	2026-06-08 09:12:27	MarkDuplicates	Reads are assumed to be ordered by: coordinate
INFO	2026-06-08 09:12:45	MarkDuplicates	Written    10,000,000 records.  Elapsed time: 00:00:17s.  Time for last 10,000,000:   17s.  Last read position: chr1:26,558,869
INFO	2026-06-08 09:13:02	MarkDuplicates	Written    20,000,000 records.  Elapsed time: 00:00:35s.  Time for last 10,000,000:   17s.  Last read position: chr1:64,632,673
INFO	2026-06-08 09:13:20	MarkDuplicates	Written    30,000,000 records.  Elapsed time: 00:00:53s.  Time for last 10,000,000:   17s.  Last read position: chr1:148,550,707
INFO	2026-06-08 09:13:37	MarkDuplicates	Written    40,000,000 records.  Elapsed time: 00:01:10s.  Time for last 10,000,000:   17s.  Last read position: chr1:161,072,859
INFO	2026-06-08 09:13:55	MarkDuplicates	Written    50,000,000 records.  Elapsed time: 00:01:28s.  Time for last 10,000,000:   17s.  Last read position: chr1:227,112,747
INFO	2026-06-08 09:14:13	MarkDuplicates	Written    60,000,000 records.  Elapsed time: 00:01:45s.  Time for last 10,000,000:   17s.  Last read position: chr2:32,916,406
INFO	2026-06-08 09:14:30	MarkDuplicates	Written    70,000,000 records.  Elapsed time: 00:02:03s.  Time for last 10,000,000:   17s.  Last read position: chr2:108,764,043
INFO	2026-06-08 09:14:48	MarkDuplicates	Written    80,000,000 records.  Elapsed time: 00:02:21s.  Time for last 10,000,000:   17s.  Last read position: chr2:189,009,156
INFO	2026-06-08 09:15:06	MarkDuplicates	Written    90,000,000 records.  Elapsed time: 00:02:39s.  Time for last 10,000,000:   17s.  Last read position: chr2:215,378,175
INFO	2026-06-08 09:15:23	MarkDuplicates	Written   100,000,000 records.  Elapsed time: 00:02:56s.  Time for last 10,000,000:   17s.  Last read position: chr2:215,425,125
INFO	2026-06-08 09:15:41	MarkDuplicates	Written   110,000,000 records.  Elapsed time: 00:03:14s.  Time for last 10,000,000:   17s.  Last read position: chr2:241,668,145
INFO	2026-06-08 09:15:59	MarkDuplicates	Written   120,000,000 records.  Elapsed time: 00:03:32s.  Time for last 10,000,000:   17s.  Last read position: chr3:51,958,147
INFO	2026-06-08 09:16:17	MarkDuplicates	Written   130,000,000 records.  Elapsed time: 00:03:50s.  Time for last 10,000,000:   17s.  Last read position: chr3:149,162,714
INFO	2026-06-08 09:16:35	MarkDuplicates	Written   140,000,000 records.  Elapsed time: 00:04:07s.  Time for last 10,000,000:   17s.  Last read position: chr4:53,476,864
INFO	2026-06-08 09:16:53	MarkDuplicates	Written   150,000,000 records.  Elapsed time: 00:04:26s.  Time for last 10,000,000:   18s.  Last read position: chr5:2,748,947
INFO	2026-06-08 09:17:11	MarkDuplicates	Written   160,000,000 records.  Elapsed time: 00:04:44s.  Time for last 10,000,000:   18s.  Last read position: chr5:113,053,922
INFO	2026-06-08 09:17:28	MarkDuplicates	Written   170,000,000 records.  Elapsed time: 00:05:01s.  Time for last 10,000,000:   17s.  Last read position: chr5:156,451,771
INFO	2026-06-08 09:17:46	MarkDuplicates	Written   180,000,000 records.  Elapsed time: 00:05:19s.  Time for last 10,000,000:   17s.  Last read position: chr6:31,627,815
INFO	2026-06-08 09:18:04	MarkDuplicates	Written   190,000,000 records.  Elapsed time: 00:05:36s.  Time for last 10,000,000:   17s.  Last read position: chr6:56,573,700
INFO	2026-06-08 09:18:22	MarkDuplicates	Written   200,000,000 records.  Elapsed time: 00:05:54s.  Time for last 10,000,000:   17s.  Last read position: chr6:160,040,607
INFO	2026-06-08 09:18:39	MarkDuplicates	Written   210,000,000 records.  Elapsed time: 00:06:12s.  Time for last 10,000,000:   17s.  Last read position: chr7:73,026,726
INFO	2026-06-08 09:18:57	MarkDuplicates	Written   220,000,000 records.  Elapsed time: 00:06:30s.  Time for last 10,000,000:   17s.  Last read position: chr7:100,572,543
INFO	2026-06-08 09:19:15	MarkDuplicates	Written   230,000,000 records.  Elapsed time: 00:06:47s.  Time for last 10,000,000:   17s.  Last read position: chr8:17,543,422
INFO	2026-06-08 09:19:32	MarkDuplicates	Written   240,000,000 records.  Elapsed time: 00:07:05s.  Time for last 10,000,000:   17s.  Last read position: chr8:116,863,064
INFO	2026-06-08 09:19:50	MarkDuplicates	Written   250,000,000 records.  Elapsed time: 00:07:23s.  Time for last 10,000,000:   17s.  Last read position: chr9:33,917,180
INFO	2026-06-08 09:20:08	MarkDuplicates	Written   260,000,000 records.  Elapsed time: 00:07:40s.  Time for last 10,000,000:   17s.  Last read position: chr9:128,123,710
INFO	2026-06-08 09:20:26	MarkDuplicates	Written   270,000,000 records.  Elapsed time: 00:07:58s.  Time for last 10,000,000:   17s.  Last read position: chr10:27,223,393
INFO	2026-06-08 09:20:43	MarkDuplicates	Written   280,000,000 records.  Elapsed time: 00:08:16s.  Time for last 10,000,000:   17s.  Last read position: chr10:99,729,555
INFO	2026-06-08 09:21:01	MarkDuplicates	Written   290,000,000 records.  Elapsed time: 00:08:34s.  Time for last 10,000,000:   17s.  Last read position: chr11:10,800,221
INFO	2026-06-08 09:21:19	MarkDuplicates	Written   300,000,000 records.  Elapsed time: 00:08:51s.  Time for last 10,000,000:   17s.  Last read position: chr11:64,809,811
INFO	2026-06-08 09:21:37	MarkDuplicates	Written   310,000,000 records.  Elapsed time: 00:09:10s.  Time for last 10,000,000:   18s.  Last read position: chr11:118,474,146
INFO	2026-06-08 09:21:54	MarkDuplicates	Written   320,000,000 records.  Elapsed time: 00:09:27s.  Time for last 10,000,000:   17s.  Last read position: chr12:40,537,659
INFO	2026-06-08 09:22:12	MarkDuplicates	Written   330,000,000 records.  Elapsed time: 00:09:45s.  Time for last 10,000,000:   17s.  Last read position: chr12:62,467,213
INFO	2026-06-08 09:22:30	MarkDuplicates	Written   340,000,000 records.  Elapsed time: 00:10:03s.  Time for last 10,000,000:   17s.  Last read position: chr12:132,750,672
INFO	2026-06-08 09:22:48	MarkDuplicates	Written   350,000,000 records.  Elapsed time: 00:10:21s.  Time for last 10,000,000:   18s.  Last read position: chr14:23,532,752
INFO	2026-06-08 09:23:06	MarkDuplicates	Written   360,000,000 records.  Elapsed time: 00:10:39s.  Time for last 10,000,000:   18s.  Last read position: chr14:101,986,054
INFO	2026-06-08 09:23:24	MarkDuplicates	Written   370,000,000 records.  Elapsed time: 00:10:57s.  Time for last 10,000,000:   18s.  Last read position: chr15:55,862,922
INFO	2026-06-08 09:23:42	MarkDuplicates	Written   380,000,000 records.  Elapsed time: 00:11:15s.  Time for last 10,000,000:   17s.  Last read position: chr16:399,404
INFO	2026-06-08 09:24:00	MarkDuplicates	Written   390,000,000 records.  Elapsed time: 00:11:32s.  Time for last 10,000,000:   17s.  Last read position: chr16:21,402,420
INFO	2026-06-08 09:24:17	MarkDuplicates	Written   400,000,000 records.  Elapsed time: 00:11:50s.  Time for last 10,000,000:   17s.  Last read position: chr16:65,004,646
INFO	2026-06-08 09:24:35	MarkDuplicates	Written   410,000,000 records.  Elapsed time: 00:12:08s.  Time for last 10,000,000:   17s.  Last read position: chr17:7,797,698
INFO	2026-06-08 09:24:53	MarkDuplicates	Written   420,000,000 records.  Elapsed time: 00:12:26s.  Time for last 10,000,000:   18s.  Last read position: chr17:41,892,395
INFO	2026-06-08 09:25:11	MarkDuplicates	Written   430,000,000 records.  Elapsed time: 00:12:44s.  Time for last 10,000,000:   17s.  Last read position: chr17:50,187,882
INFO	2026-06-08 09:25:28	MarkDuplicates	Written   440,000,000 records.  Elapsed time: 00:13:01s.  Time for last 10,000,000:   17s.  Last read position: chr17:50,190,011
INFO	2026-06-08 09:25:46	MarkDuplicates	Written   450,000,000 records.  Elapsed time: 00:13:19s.  Time for last 10,000,000:   17s.  Last read position: chr17:50,193,023
INFO	2026-06-08 09:26:04	MarkDuplicates	Written   460,000,000 records.  Elapsed time: 00:13:36s.  Time for last 10,000,000:   17s.  Last read position: chr17:50,195,614
INFO	2026-06-08 09:26:21	MarkDuplicates	Written   470,000,000 records.  Elapsed time: 00:13:54s.  Time for last 10,000,000:   17s.  Last read position: chr17:50,199,269
INFO	2026-06-08 09:26:39	MarkDuplicates	Written   480,000,000 records.  Elapsed time: 00:14:12s.  Time for last 10,000,000:   17s.  Last read position: chr17:79,077,767
INFO	2026-06-08 09:26:57	MarkDuplicates	Written   490,000,000 records.  Elapsed time: 00:14:30s.  Time for last 10,000,000:   17s.  Last read position: chr19:1,036,442
INFO	2026-06-08 09:27:15	MarkDuplicates	Written   500,000,000 records.  Elapsed time: 00:14:48s.  Time for last 10,000,000:   17s.  Last read position: chr19:14,516,114
INFO	2026-06-08 09:27:33	MarkDuplicates	Written   510,000,000 records.  Elapsed time: 00:15:05s.  Time for last 10,000,000:   17s.  Last read position: chr19:42,289,024
INFO	2026-06-08 09:27:50	MarkDuplicates	Written   520,000,000 records.  Elapsed time: 00:15:23s.  Time for last 10,000,000:   17s.  Last read position: chr20:441,893
INFO	2026-06-08 09:28:08	MarkDuplicates	Written   530,000,000 records.  Elapsed time: 00:15:41s.  Time for last 10,000,000:   17s.  Last read position: chr20:63,706,999
INFO	2026-06-08 09:28:25	MarkDuplicates	Written   540,000,000 records.  Elapsed time: 00:15:58s.  Time for last 10,000,000:   17s.  Last read position: chr22:20,727,848
INFO	2026-06-08 09:28:43	MarkDuplicates	Written   550,000,000 records.  Elapsed time: 00:16:16s.  Time for last 10,000,000:   17s.  Last read position: chr22:46,378,592
INFO	2026-06-08 09:29:01	MarkDuplicates	Written   560,000,000 records.  Elapsed time: 00:16:33s.  Time for last 10,000,000:   17s.  Last read position: chrX:74,031,665
INFO	2026-06-08 09:29:20	MarkDuplicates	Written   570,000,000 records.  Elapsed time: 00:16:53s.  Time for last 10,000,000:   19s.  Last read position: */*
INFO	2026-06-08 09:29:21	MarkDuplicates	Writing complete. Closing input iterator.
INFO	2026-06-08 09:29:21	MarkDuplicates	Duplicate Index cleanup.
INFO	2026-06-08 09:29:21	MarkDuplicates	Getting Memory Stats.
INFO	2026-06-08 09:29:21	MarkDuplicates	Before output close freeMemory: 203727000; totalMemory: 234881024; maxMemory: 63585648640
INFO	2026-06-08 09:29:21	MarkDuplicates	Closed outputs. Getting more Memory Stats.
INFO	2026-06-08 09:29:21	MarkDuplicates	After output close freeMemory: 103989800; totalMemory: 134217728; maxMemory: 63585648640
[Mon Jun 08 09:29:21 GMT 2026] picard.sam.markduplicates.MarkDuplicates done. Elapsed time: 40.45 minutes.
Runtime.totalMemory()=134217728
ls: *cram: No such file or directory
ls: *.crai: No such file or directory