Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/78/464c77de29cd5df50776da64ca86fd/aih-tih-sc-0ce15f-R1_A23WJ53LT4_1.arriba.fusions.filtered_pass_only.tsv
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/stage-5ae5f7b1-ce8a-4a12-9374-820c751df9c5/48/a612dbae0d30098322af97dac14b63/dummy_file_fusioncatcher.txt
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/86/5f0dfddef1c0a67b82abbca64e7e71/.command.sh
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/86/5f0dfddef1c0a67b82abbca64e7e71/.command.run
Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/fusion_report_db
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e0/5210ff3e3eca2e332ac622aac64787/aih-tih-sc-0ce15f-R1_A23WJ53LT4_1.starfusion.starfusion.fusion_predictions.filtered_pass_only.tsv
==> STAGING COMPLETE (6 inputs)
[32mRunning application...[0m
TLK2P1--AC110079.1
starfusion
TLK2--LINC01347
starfusion
ABCA12--AC092844.1
starfusion
arriba
POLR2J3--RASA4B
arriba
STX16--NPEPL1
arriba
0%| | 0/5 [00:00<?, ?it/s]
Processing TLK2P1--AC110079.1: 0%| | 0/5 [00:00<?, ?it/s]
Processing TLK2P1--AC110079.1: 20%|██ | 1/5 [00:00<00:00, 9.17it/s]
Processing TLK2--LINC01347: 20%|██ | 1/5 [00:00<00:00, 9.17it/s]
Processing TLK2--LINC01347: 40%|████ | 2/5 [00:00<00:00, 9.41it/s]
Processing ABCA12--AC092844.1: 40%|████ | 2/5 [00:00<00:00, 9.41it/s]
Processing ABCA12--AC092844.1: 60%|██████ | 3/5 [00:00<00:00, 9.49it/s]
Processing POLR2J3--RASA4B: 60%|██████ | 3/5 [00:00<00:00, 9.49it/s]
Processing POLR2J3--RASA4B: 80%|████████ | 4/5 [00:00<00:00, 9.54it/s]
Processing STX16--NPEPL1: 80%|████████ | 4/5 [00:00<00:00, 9.54it/s]
Processing STX16--NPEPL1: 100%|██████████| 5/5 [00:00<00:00, 9.55it/s]
Processing STX16--NPEPL1: 100%|██████████| 5/5 [00:00<00:00, 9.50it/s]
cat: fusion_report_db/DB-timestamp.txt: No such file or directory