Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/78/464c77de29cd5df50776da64ca86fd/aih-tih-sc-0ce15f-R1_A23WJ53LT4_1.arriba.fusions.filtered_pass_only.tsv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/stage-5ae5f7b1-ce8a-4a12-9374-820c751df9c5/48/a612dbae0d30098322af97dac14b63/dummy_file_fusioncatcher.txt
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/86/5f0dfddef1c0a67b82abbca64e7e71/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/86/5f0dfddef1c0a67b82abbca64e7e71/.command.run
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/fusion_report_db
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e0/5210ff3e3eca2e332ac622aac64787/aih-tih-sc-0ce15f-R1_A23WJ53LT4_1.starfusion.starfusion.fusion_predictions.filtered_pass_only.tsv
==> STAGING COMPLETE (6 inputs)

Running application...
TLK2P1--AC110079.1
starfusion
TLK2--LINC01347
starfusion
ABCA12--AC092844.1
starfusion
arriba
POLR2J3--RASA4B
arriba
STX16--NPEPL1
arriba

  0%|          | 0/5 [00:00<?, ?it/s]
Processing TLK2P1--AC110079.1:   0%|          | 0/5 [00:00<?, ?it/s]
Processing TLK2P1--AC110079.1:  20%|██        | 1/5 [00:00<00:00,  9.17it/s]
Processing TLK2--LINC01347:  20%|██        | 1/5 [00:00<00:00,  9.17it/s]   
Processing TLK2--LINC01347:  40%|████      | 2/5 [00:00<00:00,  9.41it/s]
Processing ABCA12--AC092844.1:  40%|████      | 2/5 [00:00<00:00,  9.41it/s]
Processing ABCA12--AC092844.1:  60%|██████    | 3/5 [00:00<00:00,  9.49it/s]
Processing POLR2J3--RASA4B:  60%|██████    | 3/5 [00:00<00:00,  9.49it/s]   
Processing POLR2J3--RASA4B:  80%|████████  | 4/5 [00:00<00:00,  9.54it/s]
Processing STX16--NPEPL1:  80%|████████  | 4/5 [00:00<00:00,  9.54it/s]  
Processing STX16--NPEPL1: 100%|██████████| 5/5 [00:00<00:00,  9.55it/s]
Processing STX16--NPEPL1: 100%|██████████| 5/5 [00:00<00:00,  9.50it/s]
cat: fusion_report_db/DB-timestamp.txt: No such file or directory