AIH curated blacklist: matched 7 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 139
Pass (FILTER=PASS): 2 (1.4%)
Fail (FILTER=FAIL): 137 (98.6%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 7
All 7 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 23
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 19
confidence_below_min(low<high): 16
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 16
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 14
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 13
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 9
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 5
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 5
confidence_below_min(medium<high);aih_curated_blacklist: 3
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 3
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 2
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 2
total_reads_below_min(5.0<8.0): 1
total_reads_below_min(5.0<8.0);aih_curated_blacklist: 1
Breakdown by confidence:
high: 2 pass, 3 fail (total: 5)
low: 0 pass, 70 fail (total: 70)
medium: 0 pass, 64 fail (total: 64)
Arriba filter: 139 rows -> 2 PASS; wrote aih-tih-sc-96af5b-R1_A23WJ53LT4_1.arriba.fusions.filtered.tsv and aih-tih-sc-96af5b-R1_A23WJ53LT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: aih-tih-sc-96af5b-R1_A23WJ53LT4_1.arriba.fusions.filter_summary.txt