AIH curated blacklist: matched 2 fusion rows (breakpoint_ID in qualified set)
================================================================================
ARRIBA FILTERING SUMMARY
================================================================================
Total fusions: 204
Pass (FILTER=PASS): 26 (12.7%)
Fail (FILTER=FAIL): 178 (87.3%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 2
All 2 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 24
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 22
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 20
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 19
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 18
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 17
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 15
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 11
confidence_below_min(low<high): 5
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 4
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 3
total_reads_below_min(6.0<8.0): 3
total_reads_below_min(3.0<8.0): 3
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 3
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 3
Breakdown by confidence:
high: 26 pass, 10 fail (total: 36)
low: 0 pass, 68 fail (total: 68)
medium: 0 pass, 100 fail (total: 100)
Arriba filter: 204 rows -> 26 PASS; wrote aih-tih-sc-693ffe-R1_A23WJ53LT4_1.arriba.fusions.filtered.tsv and aih-tih-sc-693ffe-R1_A23WJ53LT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: aih-tih-sc-693ffe-R1_A23WJ53LT4_1.arriba.fusions.filter_summary.txt