File Info
- Filename
- aih-tih-sc-2798bb-R1_A23WJ53LT4_1.fusions.csv
- Full Path
- s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f6/cd5d92fcf4338522b7d4a17425abd1/aih-tih-sc-2798bb-R1_A23WJ53LT4_1.fusions.csv
- Size
- 3.9 KB
- Task
- NFCORE_RNAFUSION:RNAFUSION:FUSIONREPORT_WORKFLOW:FUSIONREPORT (aih-tih-sc-2798bb-R1_A23WJ53LT4_1)
- Attempt
Content
View in new tab| Fusion | Databases | Score | Explained score | arriba | starfusion |
| TLK2P1--AC110079.1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr17:34039043:-#chr4:118595912:+,junction_reads: 19,spanning_reads: 0,ffmp: 0.0614 | ||
| FSIP1--AC013652.1 | 0.125 | 0.5 * (0.125 + 0.125) + 0.5 * () | position: chr15:39600845#chr15:39071608,reading-frame: .,type: deletion,split_reads1: 14,split_reads2: 3,discordant_mates: 0,coverage1: 2001,coverage2: 15,confidence: high | position: chr15:39600845:-#chr15:39071608:-,junction_reads: 17,spanning_reads: 0,ffmp: 0.0573 | |
| TLK2--LINC01347 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr17:62560126:+#chr1:243097299:-,junction_reads: 14,spanning_reads: 0,ffmp: 0.0417 | ||
| RPS5--ZNF71 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr19:58388245:+#chr19:56621268:+,junction_reads: 7,spanning_reads: 1,ffmp: 0.027 | ||
| STX16--NPEPL1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr20:58673711#chr20:58691724,reading-frame: out-of-frame,type: deletion/read-through,split_reads1: 51,split_reads2: 54,discordant_mates: 1,coverage1: 4675,coverage2: 549,confidence: high | ||
| ATRX--AC074035.1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chrX:77717131#chrX:5149753,reading-frame: out-of-frame,type: inversion,split_reads1: 51,split_reads2: 9,discordant_mates: 2,coverage1: 10557,coverage2: 59,confidence: high | ||
| ATRX--MTND6P12 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chrX:77717131#chrX:5149753,reading-frame: out-of-frame,type: inversion,split_reads1: 51,split_reads2: 9,discordant_mates: 2,coverage1: 10557,coverage2: 59,confidence: high | ||
| TVP23C--CDRT4 | FusionGDB2 | 0.062 | 0.5 * (0.125) + 0.5 * (0.000) | position: chr17:15503098#chr17:15440285,reading-frame: out-of-frame,type: deletion/read-through,split_reads1: 32,split_reads2: 21,discordant_mates: 1,coverage1: 458,coverage2: 270,confidence: high | |
| PCDHA10--PCDHAC1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:140858436#chr5:140978949,reading-frame: in-frame,type: deletion/read-through,split_reads1: 8,split_reads2: 13,discordant_mates: 1,coverage1: 213,coverage2: 749,confidence: high | ||
| PCDHA10--PCDHA13 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:140858436#chr5:140978949,reading-frame: in-frame,type: deletion/read-through,split_reads1: 8,split_reads2: 13,discordant_mates: 1,coverage1: 213,coverage2: 749,confidence: high | ||
| PCDHA10--PCDHAC2 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:140858436#chr5:140978949,reading-frame: in-frame,type: deletion/read-through,split_reads1: 8,split_reads2: 13,discordant_mates: 1,coverage1: 213,coverage2: 749,confidence: high | ||
| PCDHA3--PCDHAC1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:140803591#chr5:140978949,reading-frame: in-frame,type: deletion/read-through,split_reads1: 5,split_reads2: 11,discordant_mates: 0,coverage1: 80,coverage2: 749,confidence: high | ||
| PCDHA3--PCDHA13 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:140803591#chr5:140978949,reading-frame: in-frame,type: deletion/read-through,split_reads1: 5,split_reads2: 11,discordant_mates: 0,coverage1: 80,coverage2: 749,confidence: high | ||
| PCDHA3--PCDHAC2 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:140803591#chr5:140978949,reading-frame: in-frame,type: deletion/read-through,split_reads1: 5,split_reads2: 11,discordant_mates: 0,coverage1: 80,coverage2: 749,confidence: high | ||
| FAM86B1--ST18 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr8:12193975#chr8:52492434,reading-frame: out-of-frame,type: inversion,split_reads1: 5,split_reads2: 6,discordant_mates: 0,coverage1: 238,coverage2: 18,confidence: high | ||
| FAM86B1--ALKAL1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr8:12193975#chr8:52492434,reading-frame: out-of-frame,type: inversion,split_reads1: 5,split_reads2: 6,discordant_mates: 0,coverage1: 238,coverage2: 18,confidence: high | ||
| KLRC4--KLRK1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr12:10407636#chr12:10388875,reading-frame: stop-codon,type: deletion/read-through,split_reads1: 6,split_reads2: 5,discordant_mates: 0,coverage1: 73,coverage2: 163,confidence: high |
18 rows