Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c4/581782ae1a72bd9c994239d2f7e761/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c4/581782ae1a72bd9c994239d2f7e761/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/bf/dc3aec2566cd6ee505f0009abe4574/aih-tih-sc-06a169-R1_A23WJ53LT4_1.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/6c/8b345b53e7ac042e97ed4582a0f122/aih-tih-sc-06a169-R1_A23WJ53LT4_1.Aligned.sortedByCoord.out.bam.bai
==> STAGING COMPLETE (4 inputs)

[W::hts_idx_load3] The index file is older than the data file: aih-tih-sc-06a169-R1_A23WJ53LT4_1.Aligned.sortedByCoord.out.bam.bai
Load BAM file ...  Done
report duplicte rate based on sequence ...
report duplicte rate based on mapping  ...
generate R script ...
null device 
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